RchiOBHm_Chr2g0153581

Belongs to the DHHC palmitoyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0010928
Physical Location & Seq
Forward (+)
70906983 .. 70912531
5549 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52265

Sequence Viewer

Length: 2190 bp
ATGGTGAGGAAGCATGGATGGCAGTTGCCTGCTCACACCTTTCAGGTTGTCGCAATTACCGTATTTTTCTTGTTAGTGGTCGCATTCTATGCTTTCTTTGCTCCTTTCCTTGGAGGCCGCATCTGGGAATATGTTCTGATTGGAAGTTACTCTCCGGTGGCACTTCTTGTCTTTATTCTCTATGTACGATGTACTGCAATAAACCCTGCAGATCCTGGAATTATGTCCAGGTTTTACAATGGGGTAACCAATAGTTTTAATGCAAATCATGGGCTATCAGCAAAAGACCTGCCAAGAAAATTTGATGATGGTGCAACTGGGGCCTCTTCTCCATCATCAGTCTCCAGAAGTTCAATAGCAGGAGCTAACTCTAGTAGGAAAGGCTCAATAGGAGATCTAGGTGTAAATATTCCAGCAGAACCAACGGCCAACAGCGTTGGAGGAGTTGGAATCTTATGTGCCTTGTTTGTACATCAAGATTGCCGCAAACAACAGGAAGGGGCAGCTGAGCATCAGGGTGGTGAAGGTGGTGAAGAGGCTTTGTTCTGTACATTGTGCAATTCTGAGGTTCGCAAGTTCAGCAAACACTGTAGAAGTTGTGATAAGTGTGTTGATGGTTTTGATCACCACTGTCGGTGGCTTAACAACTGCGTGGGGCACAAAAATTATGTGACTTTTATAAGCCTGATGGCCATCAGTCTTGTTTGGCTTGCTATTGAAGCTGGAGTTGGTATTGCTGTACTAGTGCGCTGCTTTGTTAACAAGAGAAGCATGGAGGCAGAAATTATTGATAGACTTGGAAATGGTTTTACTCGTGCGCCATTTGCAACAGTTGTGGCTATTTGTACTGCAGTTTCTATTCTGGCATGTGTACCCCTCAGTGAACTGTTTTTCTTCCACATGATATTAATCAGGAAGGGTATTACTACCTACGAATATGTTGTGGCAATGAGAGCAATGAGTGAGGCACCCGGAGGAGATGTGGATGAGGCTATCAATAATATCATGTACTCACCAACTGGATCAGCTACAACCGGCTTGAGTGGTGGAAGTTCTTTAGGTCTGCAATACAAGGGTGCATGGTGTACCCCTCCAAGAGTATTTGTGGACTATCAGGATGAAGTTGTACCACATTTGGAGCCTGGAATGGTCCCATCAACTATTGATCCAGATGCAGCTGGAACTACAGAAAGAGAGCAAAAAGCTCCAAAAAGGCCTGTTCGTATTAGTGCTTGGAAGCTTGCAAAGCTAGACTCCAATGAGGCCATGAGAGCAGCAGCCAAAGCCAGGGCTTCATCCTCGGTTCTACGACCACTTGATAAACCTGATCATGAGCGTAGCTCAAGTGGCAATATGAGTGTGAGGAGTAGTGTAAGCACTGATACTGGGACAAATAGAGAGATGAAGAATGATCTGAGGTTGTCAAGGAACTCTTATGCGCCAAGTCAAGGTAGCCGAGATGAGTATGAAACTGGAACTCAAAGCATAAGTAGCTTCAGTAGTCCAAGCCATATTCATGAAGCAGTCACACTTAGCCCTCTACCGCAGGGTCAAGGTCTTGGTCCTCTGGGACGTTTCAGTGCAGCCACTTCAGTCCCCAGCTTAGTTCCTGAACGTCCATTACCTTCCAGGACAACATTCCCCAATGTCAATCAGACAATGTCACAGCCCTTGGGATTTGATGAAAAGATAATACAGAAGGGTAGTACTGATCCTATGATACTTTCTGGTCCACCTACTTCTCTTCTCAGAGACGTCAGAAGGACATCAGTTGTTTGGGACCAAGAAGCCGGAAGATATGTCTCAGTTCCTGTATCGGCTTCTGAAGCTCGAAACAACAGGTTATCCATTCCAGGATTATCAAATCCTAATGCAGAAACAAGCAATCTTAGAAGGCCAGTTATTCCGCCACAGGAGGCTTCATCTTCCGCAGCGAAGCCTCCAGTGCAACAAACAGAGAAACTGATGTACACGGGAGACTCCATATTCTTTGGCGGTCCACTTTTAAGTGCACCAGTTAGGGATAATTTGAGAAATGAAAGGAGTTCAGGTTCAAGAGAGGGCCAAGAGAGGGCAGCACTGAACTTGCCTAGGGAGTCTAGATTCAGACGTGATTCTGCGTCAAACCAGCTTCCTGTGTTTGTCCCAGGAGGATTTGAGCAAAACCCTAATTTCGGGTCTGGTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DHHC

Protein Analysis

729

Amino Acids

78.77

Weight (kDa)

8.74

Isoelectric Point (pI)

55.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 179 - 314 1.1e-31 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010928)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15080 AT4G15080
fragaria_vesca FvH4_6g39520 FvH4_6g39520 FvH4_6g39520
malus_domestica MD09G1139400.v1.1 MD17G1128900.v1.1
prunus_persica Prupe.3G186400_v2.0.a1
pyrus_communis pycom09g06000 pycom17g12090
rosa_chinensis RchiOBHm_Chr2g0153581
rosa_laevigata RLG00000020712
rosa_multiflora Rmu_ssc0000024.1_g000020
rosa_roxburghii Rroxscaffold_2G00094900
rosa_rugosa Rorug02G0440700
rosa_samantha Rh2AG503500 Rh2BG514200 Rh2CG489300 Rh2DG525900
rosa_wichuraiana Rw2G041350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 680
AatII GACGTC 1 cut(s) 1758
Acc36I ACCTGC 1 cut(s) 297
AccB1I GGYRCC 1 cut(s) 967
AciI CCGC 6 cut(s) 118, 484, 1544, 1907, 1929, 1995
AclWI GGATC 4 cut(s) 206, 1030, 1160, 1706
AcoI YGGCCR 2 cut(s) 426, 690
AcsI RAATTY 1 cut(s) 299
AcuI CTGAAG 3 cut(s) 1480, 1575, 1845
AcyI GRCGYC 1 cut(s) 1755
AfiI CCNNNNNNNGG 6 cut(s) 110, 124, 1287, 1448, 2071, 2174
AgsI TTSAA 3 cut(s) 354, 719, 2055
AhlI ACTAGT 1 cut(s) 742
AjiI CACGTC 1 cut(s) 2111
AjnI CCWGG 7 cut(s) 214, 227, 1141, 1286, 1628, 1852, 2146
AjuI GAANNNNNNNTTGG 2 cut(s) 711, 743
AloI GAACNNNNNNTCC 2 cut(s) 2035, 2067
Alw21I GWGCWC 1 cut(s) 2014
Alw26I GTCTC 4 cut(s) 346, 1746, 1807, 1971
Alw44I GTGCAC 1 cut(s) 2010
AlwI GGATC 4 cut(s) 206, 1030, 1160, 1706
AlwNI CAGNNNCTG 2 cut(s) 215, 1811
AoxI GGCC 8 cut(s) 115, 321, 426, 690, 1214, 1263, 1895, 2062
ApaLI GTGCAC 1 cut(s) 2010
ApeKI GCWGC 8 cut(s) 503, 750, 1175, 1274, 1277, 1583, 1931, 2075
ApoI RAATTY 1 cut(s) 299
AseI ATTAAT 1 cut(s) 908
Asp700I GAANNNNTTC 1 cut(s) 132
AspA2I CCTAGG 1 cut(s) 2090
AspLEI GCGC 3 cut(s) 750, 820, 1441
AspS9I GGNCC 7 cut(s) 321, 1150, 1562, 1730, 1780, 1997, 2062
AsuC2I CCSGG 1 cut(s) 972
AsuHPI GGTGA 5 cut(s) 16, 533, 542, 617, 1005
AvaII GGWCC 5 cut(s) 1150, 1562, 1730, 1780, 1997
AvrII CCTAGG 1 cut(s) 2090
BaeGI GKGCMC 2 cut(s) 660, 2014
BalI TGGCCA 1 cut(s) 692
BanI GGYRCC 1 cut(s) 967
BauI CACGAG 1 cut(s) 813
Bbv12I GWGCWC 1 cut(s) 2014
BbvI GCAGC 8 cut(s) 515, 737, 1187, 1286, 1289, 1595, 1943, 2087
BccI CCATC 7 cut(s) 12, 302, 340, 608, 682, 701, 1162
BceAI ACGGC 1 cut(s) 441
BciT130I CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
BclI TGATCA 2 cut(s) 622, 1327
BcnI CCSGG 1 cut(s) 972
BcoDI GTCTC 4 cut(s) 346, 1746, 1807, 1971
BcuI ACTAGT 1 cut(s) 742
BfaI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
BfmI CTRYAG 4 cut(s) 207, 589, 849, 1185
BfuAI ACCTGC 1 cut(s) 297
BglII AGATCT 1 cut(s) 394
BlnI CCTAGG 1 cut(s) 2090
BlpI GCTNAGC 1 cut(s) 507
BmcAI AGTACT 1 cut(s) 1708
Bme1390I CCNGG 8 cut(s) 216, 229, 972, 1143, 1288, 1630, 1854, 2148
Bme18I GGWCC 5 cut(s) 1150, 1562, 1730, 1780, 1997
BmgBI CACGTC 1 cut(s) 2111
BmgT120I GGNCC 7 cut(s) 321, 1150, 1562, 1730, 1780, 1997, 2062
BmiI GGNNCC 5 cut(s) 322, 969, 1140, 1152, 1781
BmrFI CCNGG 8 cut(s) 216, 229, 972, 1143, 1288, 1630, 1854, 2148
BmrI ACTGGG 2 cut(s) 327, 1395
BmsI GCATC 3 cut(s) 129, 520, 1162
BmuI ACTGGG 2 cut(s) 327, 1395
BplI GAGNNNNNCTC 2 cut(s) 1325, 1357
BpmI CTGGAG 3 cut(s) 328, 744, 1926
Bpu1102I GCTNAGC 1 cut(s) 507
BpuEI CTTGAG 2 cut(s) 1060, 1327
BpuMI CCSGG 1 cut(s) 972
BsaBI GATNNNNATC 2 cut(s) 692, 908
BsaHI GRCGYC 1 cut(s) 1755
BsaJI CCNNGG 6 cut(s) 109, 1287, 1299, 1671, 2090, 2146
BsaWI WCCGGW 1 cut(s) 154
BsaXI ACNNNNNCTCC 4 cut(s) 966, 996, 2035, 2065
Bsc4I CCNNNNNNNGG 6 cut(s) 110, 124, 1287, 1448, 2071, 2174
Bse118I RCCGGY 1 cut(s) 1034
Bse1I ACTGG 7 cut(s) 322, 1024, 1390, 1477, 1898, 1943, 2015
Bse3DI GCAATG 2 cut(s) 954, 963
Bse8I GATNNNNATC 2 cut(s) 692, 908
BseBI CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
BseDI CCNNGG 6 cut(s) 109, 1287, 1299, 1671, 2090, 2146
BseGI GGATG 4 cut(s) 23, 991, 1123, 1295
BseJI GATNNNNATC 2 cut(s) 692, 908
BseLI CCNNNNNNNGG 6 cut(s) 110, 124, 1287, 1448, 2071, 2174
BseMI GCAATG 2 cut(s) 954, 963
BseMII CTCAG 6 cut(s) 498, 555, 892, 1406, 1762, 1818
BseNI ACTGG 7 cut(s) 322, 1024, 1390, 1477, 1898, 1943, 2015
BseRI GAGGAG 3 cut(s) 456, 990, 1378
BseSI GKGCMC 2 cut(s) 660, 2014
BseXI GCAGC 8 cut(s) 515, 737, 1187, 1286, 1289, 1595, 1943, 2087
BseYI CCCAGC 1 cut(s) 1598
BsgI GTGCAG 1 cut(s) 1602
BshFI GGCC 8 cut(s) 117, 323, 428, 692, 1216, 1265, 1897, 2064
BshNI GGYRCC 1 cut(s) 967
BsiHKAI GWGCWC 1 cut(s) 2014
BsiSI CCGG 4 cut(s) 155, 972, 1035, 1791
BslFI GGGAC 6 cut(s) 1136, 1402, 1580, 1584, 1793, 2129
BslI CCNNNNNNNGG 6 cut(s) 110, 124, 1287, 1448, 2071, 2174
BsmAI GTCTC 4 cut(s) 346, 1746, 1807, 1971
BsmBI CGTCTC 1 cut(s) 1746
BsmFI GGGAC 6 cut(s) 1136, 1402, 1580, 1584, 1793, 2129
BsmI GAATGC 1 cut(s) 83
BsnI GGCC 8 cut(s) 117, 323, 428, 692, 1216, 1265, 1897, 2064
Bsp1286I GDGCHC 2 cut(s) 660, 2014
Bsp1407I TGTACA 3 cut(s) 469, 548, 1968
Bsp143I GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
Bsp1720I GCTNAGC 1 cut(s) 507
BspACI CCGC 6 cut(s) 118, 484, 1544, 1907, 1929, 1995
BspANI GGCC 8 cut(s) 117, 323, 428, 692, 1216, 1265, 1897, 2064
BspCNI CTCAG 6 cut(s) 499, 556, 891, 1407, 1761, 1817
BspHI TCATGA 2 cut(s) 1330, 1516
BspLI GGNNCC 5 cut(s) 322, 969, 1140, 1152, 1781
BspMAI CTGCAG 2 cut(s) 211, 853
BspMI ACCTGC 1 cut(s) 297
BspPI GGATC 4 cut(s) 206, 1030, 1160, 1706
BspT107I GGYRCC 1 cut(s) 967
BsrDI GCAATG 2 cut(s) 954, 963
BsrFI RCCGGY 1 cut(s) 1034
BsrGI TGTACA 3 cut(s) 469, 548, 1968
BsrI ACTGG 7 cut(s) 322, 1024, 1390, 1477, 1898, 1943, 2015
BssAI RCCGGY 1 cut(s) 1034
BssECI CCNNGG 6 cut(s) 109, 1287, 1299, 1671, 2090, 2146
BssMI GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
BssNI GRCGYC 1 cut(s) 1755
BssSI CACGAG 1 cut(s) 813
BssT1I CCWWGG 3 cut(s) 109, 1671, 2090
Bst2BI CACGAG 1 cut(s) 813
Bst2UI CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
Bst4CI ACNGT 5 cut(s) 61, 590, 632, 832, 888
Bst6I CTCTTC 3 cut(s) 331, 528, 1749
BstACI GRCGYC 1 cut(s) 1755
BstAPI GCANNNNNTGC 1 cut(s) 89
BstAUI TGTACA 3 cut(s) 469, 548, 1968
BstC8I GCNNGC 3 cut(s) 30, 711, 1242
BstDEI CTNAG 9 cut(s) 507, 564, 878, 1415, 1532, 1603, 1748, 1804, 1889
BstEII GGTNACC 1 cut(s) 244
BstF5I GGATG 4 cut(s) 23, 991, 1123, 1295
BstHHI GCGC 3 cut(s) 750, 820, 1441
BstKTI GATC 8 cut(s) 214, 397, 625, 1025, 1168, 1330, 1414, 1714
BstMAI GTCTC 4 cut(s) 346, 1746, 1807, 1971
BstMBI GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
BstNI CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
BstNSI RCATGY 1 cut(s) 870
BstPI GGTNACC 1 cut(s) 244
BstSCI CCNGG 8 cut(s) 214, 227, 970, 1141, 1286, 1628, 1852, 2146
BstSFI CTRYAG 4 cut(s) 207, 589, 849, 1185
BstSLI GKGCMC 2 cut(s) 660, 2014
BstV1I GCAGC 8 cut(s) 515, 737, 1187, 1286, 1289, 1595, 1943, 2087
BstX2I RGATCY 2 cut(s) 211, 394
BstYI RGATCY 2 cut(s) 211, 394
BsuRI GGCC 8 cut(s) 117, 323, 428, 692, 1216, 1265, 1897, 2064
BtrI CACGTC 1 cut(s) 2111
BtsCI GGATG 4 cut(s) 23, 991, 1123, 1295
BtsIMutI CAGTG 7 cut(s) 586, 628, 886, 1377, 1585, 1950, 2078
BveI ACCTGC 1 cut(s) 297
Cac8I GCNNGC 3 cut(s) 30, 711, 1242
CaiI CAGNNNCTG 2 cut(s) 215, 1811
CciI TCATGA 2 cut(s) 1330, 1516
CfoI GCGC 3 cut(s) 750, 820, 1441
Cfr10I RCCGGY 1 cut(s) 1034
Cfr13I GGNCC 7 cut(s) 321, 1150, 1562, 1730, 1780, 1997, 2062
CseI GACGC 1 cut(s) 2109
CspCI CAANNNNNGTGG 2 cut(s) 816, 851
DdeI CTNAG 9 cut(s) 507, 564, 878, 1415, 1532, 1603, 1748, 1804, 1889
DpnI GATC 8 cut(s) 213, 396, 624, 1024, 1167, 1329, 1413, 1713
DpnII GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
EaeI YGGCCR 2 cut(s) 426, 690
Eam1104I CTCTTC 3 cut(s) 331, 528, 1749
EarI CTCTTC 3 cut(s) 331, 528, 1749
EciI GGCGGA 1 cut(s) 1896
Eco130I CCWWGG 3 cut(s) 109, 1671, 2090
Eco147I AGGCCT 1 cut(s) 1216
Eco47I GGWCC 5 cut(s) 1150, 1562, 1730, 1780, 1997
Eco57I CTGAAG 3 cut(s) 1480, 1575, 1845
Eco91I GGTNACC 1 cut(s) 244
EcoO109I RGGNCCY 1 cut(s) 321
EcoO65I GGTNACC 1 cut(s) 244
EcoRII CCWGG 7 cut(s) 214, 227, 1141, 1286, 1628, 1852, 2146
EcoT14I CCWWGG 3 cut(s) 109, 1671, 2090
ErhI CCWWGG 3 cut(s) 109, 1671, 2090
Esp3I CGTCTC 1 cut(s) 1746
FalI AAGNNNNNCTT 2 cut(s) 1417, 1449
FaqI GGGAC 6 cut(s) 1136, 1402, 1580, 1584, 1793, 2129
FbaI TGATCA 2 cut(s) 622, 1327
FokI GGATG 4 cut(s) 30, 998, 1130, 1282
FspBI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
GlaI GCGC 3 cut(s) 749, 819, 1440
GsaI CCCAGC 1 cut(s) 1602
GsuI CTGGAG 3 cut(s) 328, 744, 1926
HaeIII GGCC 8 cut(s) 117, 323, 428, 692, 1216, 1265, 1897, 2064
HapII CCGG 4 cut(s) 155, 972, 1035, 1791
HgaI GACGC 1 cut(s) 2109
HhaI GCGC 3 cut(s) 750, 820, 1441
Hin1I GRCGYC 1 cut(s) 1755
Hin6I GCGC 3 cut(s) 748, 818, 1439
HinP1I GCGC 3 cut(s) 748, 818, 1439
HincII GTYRAC 1 cut(s) 760
HindII GTYRAC 1 cut(s) 760
HindIII AAGCTT 1 cut(s) 1238
HinfI GANTC 6 cut(s) 450, 1253, 1979, 2096, 2103, 2114
HpaI GTTAAC 1 cut(s) 760
HpaII CCGG 4 cut(s) 155, 972, 1035, 1791
HphI GGTGA 5 cut(s) 16, 533, 542, 617, 1005
Hpy166II GTNNAC 9 cut(s) 760, 872, 884, 1086, 1108, 1733, 1971, 2000, 2012
Hpy188I TCNGA 8 cut(s) 138, 565, 1416, 1656, 1751, 1760, 1825, 2108
Hpy8I GTNNAC 9 cut(s) 760, 872, 884, 1086, 1108, 1733, 1971, 2000, 2012
HpyAV CCTTC 7 cut(s) 491, 518, 910, 1635, 1693, 1755, 1887
HpyCH4III ACNGT 5 cut(s) 61, 590, 632, 832, 888
HpyCH4IV ACGT 4 cut(s) 1573, 1615, 1755, 2110
HpyF3I CTNAG 9 cut(s) 507, 564, 878, 1415, 1532, 1603, 1748, 1804, 1889
HpySE526I ACGT 4 cut(s) 1573, 1615, 1755, 2110
Hsp92I GRCGYC 1 cut(s) 1755
HspAI GCGC 3 cut(s) 748, 818, 1439
Ksp22I TGATCA 2 cut(s) 622, 1327
KspAI GTTAAC 1 cut(s) 760
Kzo9I GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
LmnI GCTCC 4 cut(s) 106, 362, 1138, 1210
Lsp1109I GCAGC 8 cut(s) 515, 737, 1187, 1286, 1289, 1595, 1943, 2087
LweI GCATC 3 cut(s) 129, 520, 1162
MaeI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
MaeII ACGT 4 cut(s) 1573, 1615, 1755, 2110
MaeIII GTNAC 5 cut(s) 146, 244, 670, 1525, 1662
MalI GATC 8 cut(s) 213, 396, 624, 1024, 1167, 1329, 1413, 1713
MboI GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
MboII GAAGA 7 cut(s) 318, 545, 886, 1417, 1736, 1806, 1917
MflI RGATCY 2 cut(s) 211, 394
MhlI GDGCHC 2 cut(s) 660, 2014
MlsI TGGCCA 1 cut(s) 692
MluCI AATT 8 cut(s) 54, 219, 299, 559, 664, 783, 2026, 2170
MluNI TGGCCA 1 cut(s) 692
MlyI GAGTC 3 cut(s) 1247, 1973, 2105
MmeI TCCRAC 2 cut(s) 418, 427
Mox20I TGGCCA 1 cut(s) 692
MroXI GAANNNNTTC 1 cut(s) 132
MscI TGGCCA 1 cut(s) 692
MseI TTAA 5 cut(s) 258, 642, 759, 908, 2006
MslI CAYNNNNRTG 2 cut(s) 516, 1515
Msp20I TGGCCA 1 cut(s) 692
MspA1I CMGCKG 2 cut(s) 506, 1178
MspI CCGG 4 cut(s) 155, 972, 1035, 1791
MspR9I CCNGG 8 cut(s) 216, 229, 972, 1143, 1288, 1630, 1854, 2148
Mva1269I GAATGC 1 cut(s) 83
MvaI CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
NciI CCSGG 1 cut(s) 972
NdeII GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
NlaIV GGNNCC 5 cut(s) 322, 969, 1140, 1152, 1781
NmeAIII GCCGAG 1 cut(s) 1481
NmuCI GTSAC 3 cut(s) 670, 1525, 1662
NspI RCATGY 1 cut(s) 870
PagI TCATGA 2 cut(s) 1330, 1516
PceI AGGCCT 1 cut(s) 1216
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PctI GAATGC 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 132
PfeI GAWTC 3 cut(s) 450, 2103, 2114
PflFI GACNNNGTC 1 cut(s) 1660
PfoI TCCNGGA 3 cut(s) 214, 1628, 1852
PleI GAGTC 3 cut(s) 1247, 1973, 2104
PpsI GAGTC 3 cut(s) 1247, 1973, 2104
PshBI ATTAAT 1 cut(s) 908
PsiI TTATAA 1 cut(s) 680
Psp6I CCWGG 7 cut(s) 214, 227, 1141, 1286, 1628, 1852, 2146
PspEI GGTNACC 1 cut(s) 244
PspFI CCCAGC 1 cut(s) 1598
PspGI CCWGG 7 cut(s) 214, 227, 1141, 1286, 1628, 1852, 2146
PspN4I GGNNCC 5 cut(s) 322, 969, 1140, 1152, 1781
PspPI GGNCC 7 cut(s) 321, 1150, 1562, 1730, 1780, 1997, 2062
PsrI GAACNNNNNNTAC 2 cut(s) 1605, 1637
PstI CTGCAG 2 cut(s) 211, 853
PstNI CAGNNNCTG 2 cut(s) 215, 1811
PsuI RGATCY 2 cut(s) 211, 394
PsyI GACNNNGTC 1 cut(s) 1660
PvuII CAGCTG 2 cut(s) 506, 1178
RseI CAYNNNNRTG 2 cut(s) 516, 1515
SaqAI TTAA 5 cut(s) 258, 642, 759, 908, 2006
Sau3AI GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
Sau96I GGNCC 7 cut(s) 321, 1150, 1562, 1730, 1780, 1997, 2062
ScaI AGTACT 1 cut(s) 1708
SchI GAGTC 3 cut(s) 1247, 1973, 2105
ScrFI CCNGG 8 cut(s) 216, 229, 972, 1143, 1288, 1630, 1854, 2148
SduI GDGCHC 2 cut(s) 660, 2014
SfaNI GCATC 3 cut(s) 129, 520, 1162
SfcI CTRYAG 4 cut(s) 207, 589, 849, 1185
SinI GGWCC 5 cut(s) 1150, 1562, 1730, 1780, 1997
SmiMI CAYNNNNRTG 2 cut(s) 516, 1515
SmlI CTYRAG 2 cut(s) 1039, 1342
SmoI CTYRAG 2 cut(s) 1039, 1342
SpeI ACTAGT 1 cut(s) 742
Sse9I AATT 8 cut(s) 54, 219, 299, 559, 664, 783, 2026, 2170
SseBI AGGCCT 1 cut(s) 1216
SsiI CCGC 6 cut(s) 118, 484, 1544, 1907, 1929, 1995
SspI AATATT 1 cut(s) 409
SspMI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
StuI AGGCCT 1 cut(s) 1216
StyD4I CCNGG 8 cut(s) 214, 227, 970, 1141, 1286, 1628, 1852, 2146
StyI CCWWGG 3 cut(s) 109, 1671, 2090
TaaI ACNGT 5 cut(s) 61, 590, 632, 832, 888
TaiI ACGT 4 cut(s) 1576, 1618, 1758, 2113
TaqI TCGA 1 cut(s) 1831
TasI AATT 8 cut(s) 54, 219, 299, 559, 664, 783, 2026, 2170
TatI WGTACW 8 cut(s) 191, 469, 548, 739, 845, 1008, 1706, 1968
TauI GCSGC 2 cut(s) 120, 486
TfiI GAWTC 3 cut(s) 450, 2103, 2114
Tru1I TTAA 5 cut(s) 258, 642, 759, 908, 2006
Tru9I TTAA 5 cut(s) 258, 642, 759, 908, 2006
TscAI CASTG 7 cut(s) 593, 635, 886, 1384, 1585, 1950, 2085
TseFI GTSAC 3 cut(s) 670, 1525, 1662
TseI GCWGC 8 cut(s) 503, 750, 1175, 1274, 1277, 1583, 1931, 2075
Tsp45I GTSAC 3 cut(s) 670, 1525, 1662
TspDTI ATGAA 9 cut(s) 1134, 1284, 1418, 1482, 1505, 1533, 1698, 1911, 2052
TspRI CASTG 7 cut(s) 593, 635, 886, 1384, 1585, 1950, 2085
Tth111I GACNNNGTC 1 cut(s) 1660
VneI GTGCAC 1 cut(s) 2010
VpaK11BI GGWCC 5 cut(s) 1150, 1562, 1730, 1780, 1997
VspI ATTAAT 1 cut(s) 908
XapI RAATTY 1 cut(s) 299
XbaI TCTAGA 1 cut(s) 2099
XceI RCATGY 1 cut(s) 870
XmaJI CCTAGG 1 cut(s) 2090
XmnI GAANNNNTTC 1 cut(s) 132
XspI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
ZraI GACGTC 1 cut(s) 1756
ZrmI AGTACT 1 cut(s) 1708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.