Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0013820

Physical Location & Seq

Genomic Coordinates Forward (+)

36459222 .. 36463495

Gene Structure 4274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g48450.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGTCACCTGCACTCTCCCTATCTCTCTCCCTCTCTCCAGTCTGCAACGCCCAGGAAGTTTCTAAGGACACCCACCTCCTAAAAAACACTAGCAGAGAAACCCCATGTCACAAATCTCAGCCAAACTTGAAATCCTCTAGAAGATCACTATTGAATGCTGCCTCTCTTGGCTTTATAGTGCCTGGAACCCTCATGTCTAACTCCGCAAGAGCTGAGCCTGAGCCAGAGAGCCCGAATGCATCAACTTCAAGCAGACTGTCATACTCCAGATTCTTGCAGTACTTGGATGAAGGTGCTGTGAGGAAGGTAGACCTGTTTGAGAATGGAACCGTCGCGATCGCCGAGATCTTCAATCCCACATTAGAGAAGCTCCAGAGAGTCAGAGTTCAGCTACCTGGATTGCCACAAGAGTTGCTGAGGAAACTAAAAGAGAAGAACATAGATTTTGCTGCTCATCCAAAGGAAGTGGATTGGTGGCCTGCAGTACTAGACTTGTTGGGTAATTTTGCTTTTCCACTGTTACTTCTTGGGTCATTGCTCTTGAGGAGTTCATCATCAAACATGCCAGGAGGCCCCAACTTGCCTTTTGGACTTGGGAGGAGCAAGGCCAAATTTCAAATGGAACCCAATACAGGGGTAACATTTGATGATGTGGCTGGAGTTGATGAAGCAAAGCAAGATTTCCAAGAGATAGTTGAATTTCTGAGAACTCCAGAGAAGTTTGCTGCAGTAGGTGCAAGAATTCCTAAAGGGGTACTTTTAGTAGGGCCGCCGGGGACCGGAAAGACACTGCTGGCCAAGGCCATTGCAGGAGAGGCAGGGGTGCCTTTCTTTTCTCTGTCAGGGTCGGAGTTCATTGAGATGTTTGTAGGAGTAGGAGCTTCTAGAGTAAGAGACTTGTTCAACAAGGCGAAAGATAATTCGCCGTGCTTGGTTTTCATTGATGAGATTGATGCTGTTGGGAGGCAAAGAGGGACAGGAATCGGTGGAGGAAATGATGAGAGGGAGCAGACATTGAATCAGCTTCTTACTGAAATGGATGGATTTAGTGGGAACAGTGGAGTAATTGTTATTGCTGCTACTAACCGCCCTGAAATTCTTGATTCTGCTTTGCTTAGGCCCGGGAGGTTTGACAGACAAGTCTCAGTTGGATTGCCAGATATTAGGGGAAGAGAGGAGATATTAAAGGTGCATAGTAACAACAAGAAGCTTGATAAGAGTGTTTCTATTGATATTATTGCTATGAGAACTCCTGGATTCAGCGGTGCAGATCTCGCAAACCTCATGAATGAAGCTGCGATTCTTGCTGGTAGGAGAGGCAAAGATAAGATAACAGCAAAAGAAATAGATGACTCGATTGATCGGATTGTTGCAGGGATGGAAGGAACAAAAATGACTGATGGAAAGAGCAAGACTCTTGTGGCTTACCATGAAGTTGGCCACGCTATTTGTGCAACATTGACTCCGGGCCATGATCCAGTGCAGAAAGTCTCTCTTATTCCCCGAGGCCAAGCTCGCGGTCTTACATGGTTCTTACCAGGTGAAGATCCTGCTCTCATTTCTAAGCAACAACTGTTTGCTAGAATAGTTGGAGGTCTAGGAGGTAGAGCAGCAGAAGAAATAATTTTTGGGGAGCCAGAAATAACAACTGGTGCAGCAGGAGACTTGCAACAGGTCACACAAATAGCAAAACAGATGGTAACAATGTATGGTATGTCCGAGATTGGACCATGGGCATTGACAGACCCAGCAGCACAAAGCAATGACTTAGTGTTGAGGATGCTAGCAAGGAACACCATGTCCGAAAAACTTGCAGAGGATATTGACTTGTCAGTGAGACGCATAATCGAAAGTGCATATGAGGTTGCGAAGAATCATATAAGGAATAACCGGGCAGCCATGGATCAATTAGTAGATGTGCTATTAGAAAAGGAGATACTCACTGGAGATGAGTTCAGGGCAATTCTGTCTGAATTTACTGATACTTCTTTGGTAGAGGTAAATAGGAACTCCATCAGGGAAATGATTGAAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009668 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext PPR Peptidase_M41

Protein Analysis

679

Amino Acids

73.56

Weight (kDa)

5.67

Isoelectric Point (pI)

42.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	59 - 153	1.5e-07	FtsH Extracellular
AAA	PF00004	252 - 384	2.2e-46	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	407 - 450	7.5e-13	AAA+ lid domain
Peptidase_M41	PF01434	465 - 565	3.1e-40	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15250 AT5G15250
fragaria_vesca	FvH4_6g48450 FvH4_6g48450 FvH4_6g48450
malus_domestica	MD09G1051800.v1.1
prunus_persica	Prupe.3G266900_v2.0.a1
pyrus_communis	pycom111g04310
rosa_chinensis	RchiOBHm_Chr2g0168361
rosa_laevigata	RLG00000021770
rosa_multiflora	Rmu_sc0003354.1_g000018
rosa_roxburghii	Rroxscaffold_2G00083110
rosa_rugosa	Rorug02G0533200.1
rosa_samantha	Rh2AG602300 Rh2BG615600 Rh2CG583300
rosa_wichuraiana	Rw0G019810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	16
AasI	GACNNNNNNGTC	1 cut(s)	1139
Acc36I	ACCTGC	1 cut(s)	16
AccB1I	GGYRCC	1 cut(s)	823
AccI	GTMKAC	1 cut(s)	309
AccII	CGCG	2 cut(s)	335, 1518
AciI	CCGC	5 cut(s)	204, 770, 1087, 1263, 1518
AclWI	GGATC	3 cut(s)	1469, 1541, 1911
AcoI	YGGCCR	2 cut(s)	795, 1438
AcsI	RAATTY	5 cut(s)	611, 698, 741, 1095, 1973
AfaI	GTAC	3 cut(s)	281, 486, 756
AfiI	CCNNNNNNNGG	3 cut(s)	632, 633, 779
AgsI	TTSAA	9 cut(s)	130, 154, 249, 352, 617, 698, 904, 1018, 2030
AjnI	CCWGG	6 cut(s)	51, 181, 394, 565, 1252, 1537
AjuI	GAANNNNNNNTTGG	2 cut(s)	1611, 1643
AloI	GAACNNNNNNTCC	2 cut(s)	1784, 1816
AluBI	AGCT	8 cut(s)	212, 370, 391, 881, 1024, 1210, 1295, 1514
AluI	AGCT	8 cut(s)	212, 370, 391, 881, 1024, 1210, 1295, 1514
Alw26I	GTCTC	5 cut(s)	888, 1147, 1495, 1656, 1831
AlwI	GGATC	3 cut(s)	1469, 1541, 1911
Ama87I	CYCGRG	2 cut(s)	1121, 1503
ApeKI	GCWGC	9 cut(s)	158, 449, 725, 1076, 1295, 1610, 1655, 1751, 1895
ApoI	RAATTY	5 cut(s)	611, 698, 741, 1095, 1973
AsiSI	GCGATCGC	1 cut(s)	339
AspS9I	GGNCC	6 cut(s)	572, 767, 777, 1119, 1468, 1727
AsuC2I	CCSGG	5 cut(s)	774, 1122, 1123, 1467, 1892
AsuHPI	GGTGA	1 cut(s)	1553
AsuNHI	GCTAGC	1 cut(s)	1783
AvaI	CYCGRG	2 cut(s)	1121, 1503
AvaII	GGWCC	2 cut(s)	777, 1727
BalI	TGGCCA	2 cut(s)	797, 1440
BanI	GGYRCC	1 cut(s)	823
BanII	GRGCYC	1 cut(s)	233
BbvCI	CCTCAGC	1 cut(s)	416
BbvI	GCAGC	9 cut(s)	145, 436, 712, 1063, 1282, 1622, 1667, 1763, 1907
BccI	CCATC	5 cut(s)	1034, 1372, 1394, 1690, 2021
BceAI	ACGGC	1 cut(s)	910
BcgI	CGANNNNNNTGC	2 cut(s)	1793, 1827
BciT130I	CCWGG	6 cut(s)	53, 183, 396, 567, 1254, 1539
BcnI	CCSGG	5 cut(s)	774, 1122, 1123, 1467, 1892
BcoDI	GTCTC	5 cut(s)	888, 1147, 1495, 1656, 1831
BfaI	CTAG	7 cut(s)	90, 138, 488, 885, 1581, 1598, 1784
BfmI	CTRYAG	2 cut(s)	480, 726
BfuAI	ACCTGC	1 cut(s)	16
BglII	AGATCT	2 cut(s)	345, 1270
BlpI	GCTNAGC	1 cut(s)	213
BmcAI	AGTACT	2 cut(s)	281, 486
Bme18I	GGWCC	2 cut(s)	777, 1727
BmeT110I	CYCGRG	2 cut(s)	1121, 1503
BmgT120I	GGNCC	6 cut(s)	572, 767, 777, 1119, 1468, 1727
BmiI	GGNNCC	7 cut(s)	187, 328, 574, 624, 778, 825, 1635
BmsI	GCATC	3 cut(s)	248, 943, 1770
BmtI	GCTAGC	1 cut(s)	1787
BplI	GAGNNNNNCTC	2 cut(s)	1399, 1431
BpmI	CTGGAG	6 cut(s)	21, 250, 356, 678, 696, 1965
Bpu10I	CCTNAGC	3 cut(s)	219, 416, 1115
Bpu1102I	GCTNAGC	1 cut(s)	213
BpuEI	CTTGAG	1 cut(s)	562
BpuMI	CCSGG	5 cut(s)	774, 1122, 1123, 1467, 1892
BsaJI	CCNNGG	7 cut(s)	51, 773, 798, 1121, 1504, 1730, 1899
BsaWI	WCCGGW	1 cut(s)	779
BsaXI	ACNNNNNCTCC	4 cut(s)	1053, 1083, 1447, 1477
Bsc4I	CCNNNNNNNGG	3 cut(s)	632, 633, 779
Bse1I	ACTGG	4 cut(s)	38, 1478, 1654, 1948
Bse3DI	GCAATG	3 cut(s)	533, 804, 1768
BseBI	CCWGG	6 cut(s)	53, 183, 396, 567, 1254, 1539
BseDI	CCNNGG	7 cut(s)	51, 773, 798, 1121, 1504, 1730, 1899
BseGI	GGATG	5 cut(s)	292, 454, 1045, 1383, 1785
BseLI	CCNNNNNNNGG	3 cut(s)	632, 633, 779
BseMI	GCAATG	3 cut(s)	533, 804, 1768
BseMII	CTCAG	6 cut(s)	131, 204, 210, 407, 695, 1158
BseNI	ACTGG	4 cut(s)	38, 1478, 1654, 1948
BseRI	GAGGAG	3 cut(s)	559, 613, 1190
BseXI	GCAGC	9 cut(s)	145, 436, 712, 1063, 1282, 1622, 1667, 1763, 1907
BseYI	CCCAGC	1 cut(s)	1747
BsgI	GTGCAG	3 cut(s)	1287, 1502, 1674
Bsh1236I	CGCG	2 cut(s)	335, 1518
Bsh1285I	CGRYCG	1 cut(s)	339
BshNI	GGYRCC	1 cut(s)	823
BsiEI	CGRYCG	1 cut(s)	339
BsiHKCI	CYCGRG	2 cut(s)	1121, 1503
BsiSI	CCGG	5 cut(s)	773, 780, 1122, 1466, 1891
BslFI	GGGAC	2 cut(s)	790, 988
BslI	CCNNNNNNNGG	3 cut(s)	632, 633, 779
BsmAI	GTCTC	5 cut(s)	888, 1147, 1495, 1656, 1831
BsmBI	CGTCTC	1 cut(s)	1831
BsmFI	GGGAC	2 cut(s)	790, 988
BsmI	GAATGC	2 cut(s)	160, 241
BsoBI	CYCGRG	2 cut(s)	1121, 1503
Bsp1286I	GDGCHC	1 cut(s)	233
Bsp143I	GATC	8 cut(s)	143, 336, 345, 1270, 1360, 1474, 1546, 1903
Bsp1720I	GCTNAGC	1 cut(s)	213
Bsp19I	CCATGG	2 cut(s)	1730, 1899
Bsp68I	TCGCGA	1 cut(s)	335
BspACI	CCGC	5 cut(s)	204, 770, 1087, 1263, 1518
BspCNI	CTCAG	6 cut(s)	130, 205, 211, 408, 696, 1157
BspFNI	CGCG	2 cut(s)	335, 1518
BspHI	TCATGA	1 cut(s)	1284
BspLI	GGNNCC	7 cut(s)	187, 328, 574, 624, 778, 825, 1635
BspMAI	CTGCAG	2 cut(s)	484, 730
BspMI	ACCTGC	1 cut(s)	16
BspOI	GCTAGC	1 cut(s)	1787
BspPI	GGATC	3 cut(s)	1469, 1541, 1911
BspT107I	GGYRCC	1 cut(s)	823
BsrDI	GCAATG	3 cut(s)	533, 804, 1768
BsrI	ACTGG	4 cut(s)	38, 1478, 1654, 1948
BssECI	CCNNGG	7 cut(s)	51, 773, 798, 1121, 1504, 1730, 1899
BssMI	GATC	8 cut(s)	143, 336, 345, 1270, 1360, 1474, 1546, 1903
BssT1I	CCWWGG	3 cut(s)	798, 1730, 1899
Bst2UI	CCWGG	6 cut(s)	53, 183, 396, 567, 1254, 1539
Bst4CI	ACNGT	5 cut(s)	258, 331, 519, 1058, 1575
Bst6I	CTCTTC	1 cut(s)	1165
BstAPI	GCANNNNNTGC	1 cut(s)	734
BstC8I	GCNNGC	4 cut(s)	480, 795, 1516, 1785
BstDSI	CCRYGG	2 cut(s)	1730, 1899
BstF5I	GGATG	5 cut(s)	292, 454, 1045, 1383, 1785
BstFNI	CGCG	2 cut(s)	335, 1518
BstKTI	GATC	8 cut(s)	146, 339, 348, 1273, 1363, 1477, 1549, 1906
BstMAI	GTCTC	5 cut(s)	888, 1147, 1495, 1656, 1831
BstMBI	GATC	8 cut(s)	143, 336, 345, 1270, 1360, 1474, 1546, 1903
BstMCI	CGRYCG	1 cut(s)	339
BstMWI	GCNNNNNNNGC	6 cut(s)	734, 815, 1274, 1304, 1451, 1515
BstNI	CCWGG	6 cut(s)	53, 183, 396, 567, 1254, 1539
BstNSI	RCATGY	1 cut(s)	565
BstSFI	CTRYAG	2 cut(s)	480, 726
BstUI	CGCG	2 cut(s)	335, 1518
BstV1I	GCAGC	9 cut(s)	145, 436, 712, 1063, 1282, 1622, 1667, 1763, 1907
BstX2I	RGATCY	3 cut(s)	345, 1270, 1546
BstXI	CCANNNNNNTGG	1 cut(s)	1436
BstYI	RGATCY	3 cut(s)	345, 1270, 1546
BtgI	CCRYGG	2 cut(s)	1730, 1899
BtsCI	GGATG	5 cut(s)	292, 454, 1045, 1383, 1785
BtsI	GCAGTG	1 cut(s)	788
BtsIMutI	CAGTG	6 cut(s)	515, 788, 1063, 1485, 1839, 1941
BtuMI	TCGCGA	1 cut(s)	335
BveI	ACCTGC	1 cut(s)	16
Cac8I	GCNNGC	4 cut(s)	480, 795, 1516, 1785
CciI	TCATGA	1 cut(s)	1284
Cfr13I	GGNCC	6 cut(s)	572, 767, 777, 1119, 1468, 1727
Cfr9I	CCCGGG	1 cut(s)	1121
CseI	GACGC	1 cut(s)	1848
CsiI	ACCWGGT	1 cut(s)	1537
Csp6I	GTAC	3 cut(s)	280, 485, 755
CspCI	CAANNNNNGTGG	6 cut(s)	393, 428, 447, 482, 1430, 1465
CviQI	GTAC	3 cut(s)	280, 485, 755
DpnI	GATC	8 cut(s)	145, 338, 347, 1272, 1362, 1476, 1548, 1905
DpnII	GATC	8 cut(s)	143, 336, 345, 1270, 1360, 1474, 1546, 1903
DrdI	GACNNNNNNGTC	1 cut(s)	1139
DseDI	GACNNNNNNGTC	1 cut(s)	1139
EaeI	YGGCCR	2 cut(s)	795, 1438
Eam1104I	CTCTTC	1 cut(s)	1165
EarI	CTCTTC	1 cut(s)	1165
Eco130I	CCWWGG	3 cut(s)	798, 1730, 1899
Eco24I	GRGCYC	1 cut(s)	233
Eco47I	GGWCC	2 cut(s)	777, 1727
Eco88I	CYCGRG	2 cut(s)	1121, 1503
EcoO109I	RGGNCCY	1 cut(s)	572
EcoRI	GAATTC	1 cut(s)	741
EcoRII	CCWGG	6 cut(s)	51, 181, 394, 565, 1252, 1537
EcoT14I	CCWWGG	3 cut(s)	798, 1730, 1899
EcoT22I	ATGCAT	1 cut(s)	241
EcoT38I	GRGCYC	1 cut(s)	233
ErhI	CCWWGG	3 cut(s)	798, 1730, 1899
Esp3I	CGTCTC	1 cut(s)	1831
FalI	AAGNNNNNCTT	4 cut(s)	741, 773, 1479, 1511
FaqI	GGGAC	2 cut(s)	790, 988
FauNDI	CATATG	1 cut(s)	1858
FblI	GTMKAC	1 cut(s)	309
FokI	GGATG	5 cut(s)	299, 441, 1052, 1390, 1792
FriOI	GRGCYC	1 cut(s)	233
FspBI	CTAG	7 cut(s)	90, 138, 488, 885, 1581, 1598, 1784
GsaI	CCCAGC	1 cut(s)	1751
GsuI	CTGGAG	6 cut(s)	21, 250, 356, 678, 696, 1965
HapII	CCGG	5 cut(s)	773, 780, 1122, 1466, 1891
HgaI	GACGC	1 cut(s)	1848
HindIII	AAGCTT	1 cut(s)	1208
HpaII	CCGG	5 cut(s)	773, 780, 1122, 1466, 1891
HphI	GGTGA	1 cut(s)	1553
Hpy166II	GTNNAC	1 cut(s)	310
Hpy188I	TCNGA	7 cut(s)	383, 705, 850, 1365, 1720, 1804, 1972
Hpy188III	TCNNGA	9 cut(s)	138, 267, 334, 373, 541, 713, 885, 1100, 1285
Hpy8I	GTNNAC	1 cut(s)	310
Hpy99I	CGWCG	1 cut(s)	335
HpyAV	CCTTC	3 cut(s)	284, 298, 1376
HpyCH4III	ACNGT	5 cut(s)	258, 331, 519, 1058, 1575
HpyF10VI	GCNNNNNNNGC	6 cut(s)	734, 815, 1274, 1304, 1451, 1515
Kzo9I	GATC	8 cut(s)	143, 336, 345, 1270, 1360, 1474, 1546, 1903
LmnI	GCTCC	5 cut(s)	375, 600, 878, 1006, 1633
Lsp1109I	GCAGC	9 cut(s)	145, 436, 712, 1063, 1282, 1622, 1667, 1763, 1907
LweI	GCATC	3 cut(s)	248, 943, 1770
MabI	ACCWGGT	1 cut(s)	1537
MaeI	CTAG	7 cut(s)	90, 138, 488, 885, 1581, 1598, 1784
MaeIII	GTNAC	7 cut(s)	3, 107, 519, 637, 1196, 1675, 1699
MalI	GATC	8 cut(s)	145, 338, 347, 1272, 1362, 1476, 1548, 1905
MboI	GATC	8 cut(s)	143, 336, 345, 1270, 1360, 1474, 1546, 1903
MboII	GAAGA	7 cut(s)	153, 340, 445, 1182, 1556, 1628, 1882
MflI	RGATCY	3 cut(s)	345, 1270, 1546
MhlI	GDGCHC	1 cut(s)	233
MlsI	TGGCCA	2 cut(s)	797, 1440
MluNI	TGGCCA	2 cut(s)	797, 1440
MlyI	GAGTC	4 cut(s)	387, 1346, 1408, 1456
MmeI	TCCRAC	3 cut(s)	828, 1129, 1570
Mox20I	TGGCCA	2 cut(s)	797, 1440
Mph1103I	ATGCAT	1 cut(s)	241
MscI	TGGCCA	2 cut(s)	797, 1440
MseI	TTAA	1 cut(s)	1184
MslI	CAYNNNNRTG	1 cut(s)	860
Msp20I	TGGCCA	2 cut(s)	797, 1440
MspA1I	CMGCKG	1 cut(s)	1263
MspI	CCGG	5 cut(s)	773, 780, 1122, 1466, 1891
Mva1269I	GAATGC	2 cut(s)	160, 241
MvaI	CCWGG	6 cut(s)	53, 183, 396, 567, 1254, 1539
MvnI	CGCG	2 cut(s)	335, 1518
MwoI	GCNNNNNNNGC	6 cut(s)	734, 815, 1274, 1304, 1451, 1515
NciI	CCSGG	5 cut(s)	774, 1122, 1123, 1467, 1892
NcoI	CCATGG	2 cut(s)	1730, 1899
NdeI	CATATG	1 cut(s)	1858
NdeII	GATC	8 cut(s)	143, 336, 345, 1270, 1360, 1474, 1546, 1903
NheI	GCTAGC	1 cut(s)	1783
NlaIV	GGNNCC	7 cut(s)	187, 328, 574, 624, 778, 825, 1635
NmeAIII	GCCGAG	1 cut(s)	367
NmuCI	GTSAC	3 cut(s)	3, 107, 1675
NruI	TCGCGA	1 cut(s)	335
NsiI	ATGCAT	1 cut(s)	241
NspI	RCATGY	1 cut(s)	565
PagI	TCATGA	1 cut(s)	1284
PaqCI	CACCTGC	1 cut(s)	16
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PctI	GAATGC	2 cut(s)	160, 241
PfeI	GAWTC	7 cut(s)	270, 981, 1018, 1103, 1257, 1300, 1873
PfoI	TCCNGGA	1 cut(s)	1252
Ple19I	CGATCG	1 cut(s)	339
PleI	GAGTC	4 cut(s)	386, 1346, 1408, 1456
PpsI	GAGTC	4 cut(s)	386, 1346, 1408, 1456
Psp6I	CCWGG	6 cut(s)	51, 181, 394, 565, 1252, 1537
PspFI	CCCAGC	1 cut(s)	1747
PspGI	CCWGG	6 cut(s)	51, 181, 394, 565, 1252, 1537
PspN4I	GGNNCC	7 cut(s)	187, 328, 574, 624, 778, 825, 1635
PspPI	GGNCC	6 cut(s)	572, 767, 777, 1119, 1468, 1727
PstI	CTGCAG	2 cut(s)	484, 730
PsuI	RGATCY	3 cut(s)	345, 1270, 1546
PvuI	CGATCG	1 cut(s)	339
RgaI	GCGATCGC	1 cut(s)	339
RruI	TCGCGA	1 cut(s)	335
RsaI	GTAC	3 cut(s)	281, 486, 756
RsaNI	GTAC	3 cut(s)	280, 485, 755
RseI	CAYNNNNRTG	1 cut(s)	860
SaqAI	TTAA	1 cut(s)	1184
Sau3AI	GATC	8 cut(s)	143, 336, 345, 1270, 1360, 1474, 1546, 1903
Sau96I	GGNCC	6 cut(s)	572, 767, 777, 1119, 1468, 1727
ScaI	AGTACT	2 cut(s)	281, 486
SchI	GAGTC	4 cut(s)	387, 1346, 1408, 1456
SduI	GDGCHC	1 cut(s)	233
SexAI	ACCWGGT	1 cut(s)	1537
SfaAI	GCGATCGC	1 cut(s)	339
SfaNI	GCATC	3 cut(s)	248, 943, 1770
SfcI	CTRYAG	2 cut(s)	480, 726
SgfI	GCGATCGC	1 cut(s)	339
SinI	GGWCC	2 cut(s)	777, 1727
SmaI	CCCGGG	1 cut(s)	1123
SmiMI	CAYNNNNRTG	1 cut(s)	860
SmlI	CTYRAG	1 cut(s)	541
SmoI	CTYRAG	1 cut(s)	541
SsiI	CCGC	5 cut(s)	204, 770, 1087, 1263, 1518
SspMI	CTAG	7 cut(s)	90, 138, 488, 885, 1581, 1598, 1784
StyI	CCWWGG	3 cut(s)	798, 1730, 1899
TaaI	ACNGT	5 cut(s)	258, 331, 519, 1058, 1575
TaqI	TCGA	2 cut(s)	1355, 1848
TatI	WGTACW	2 cut(s)	279, 484
TauI	GCSGC	1 cut(s)	772
TfiI	GAWTC	7 cut(s)	270, 981, 1018, 1103, 1257, 1300, 1873
Tru1I	TTAA	1 cut(s)	1184
Tru9I	TTAA	1 cut(s)	1184
TscAI	CASTG	6 cut(s)	522, 795, 1063, 1485, 1839, 1948
TseFI	GTSAC	3 cut(s)	3, 107, 1675
TseI	GCWGC	9 cut(s)	158, 449, 725, 1076, 1295, 1610, 1655, 1751, 1895
Tsp45I	GTSAC	3 cut(s)	3, 107, 1675
TspDTI	ATGAA	8 cut(s)	303, 540, 681, 844, 928, 1301, 1305, 1446
TspMI	CCCGGG	1 cut(s)	1121
TspRI	CASTG	6 cut(s)	522, 795, 1063, 1485, 1839, 1948
VpaK11BI	GGWCC	2 cut(s)	777, 1727
XapI	RAATTY	5 cut(s)	611, 698, 741, 1095, 1973
XbaI	TCTAGA	2 cut(s)	137, 884
XceI	RCATGY	1 cut(s)	565
XcmI	CCANNNNNNNNNTGG	1 cut(s)	616
XmaI	CCCGGG	1 cut(s)	1121
XmiI	GTMKAC	1 cut(s)	309
XspI	CTAG	7 cut(s)	90, 138, 488, 885, 1581, 1598, 1784
ZrmI	AGTACT	2 cut(s)	281, 486
Zsp2I	ATGCAT	1 cut(s)	241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.