Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013820

Physical Location & Seq

Genomic Coordinates Forward (+)

82738642 .. 82741334

Gene Structure 2693 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53604

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGTCACCTGCTCTCTCTCTATCTCTCTCCCTCTCTCCAGTCTGTAAAACCCAGGAAACTTCCAAGGACACCTACCTCAACAGCAACAGAGAAACCCCATGTCACAAGTCTCACTCAAACTTGAAATCCACTCGAAGATCTCTATTAAATTTTGCCACTCTTGGACTCATAGTGCCTGGATCCCTCTCTGTTTCTCACCCTGCAAAAGCTGAGCCTAAGCCAGAGAGCCCGATTGCATCAACTTCAAGCAGAATGTCATACTCAAGATTCTTGCAGTACTTGGATGAAGGAGTAGTGAGGAAGGTAGACCTGTTTGATCAGAATGGAACTGTCGCGATCGCCGAGATCTTCAACCCCACATTAGAGAAGCTCCAGAGAGTCAGAGTTCAGCTACCTGGATTGCCACCAGAGTTGCTGAGGAAACTAGAAGAGAAGAACATAGACTTTGCAGCTCATCCAAGGGAAGTGGATTGGTGGCCTGCAGTACTGGACTTGTTGGGGAATTTTGCTTTTCCACTGATACTTCTTGGGATATTGCTTTTGAGGAGTTCATCACCAAACATACCAGGAGGCCCCAACTTACCTTTTGGACTTGGAAGGAGCAAAGCCAAATTCCAAATGGAACCGAATACCGGGGTAACATTTGATGATGTGGCTGGGGTCGATGAAGCAAAGCAAGATTTCCAAGAGATTGTTGAATTTCTCAAAACTCCAGAGAAGTTTGCTGCGGTTGGTGCAAGAATTCCCAAAGGGGTTCTTTTAGTAGGGCCACCAGGGACCGGAAAGACATTGCTGGGTAAGGCCATTGCAGGAGAGGCAGCGGTGCCTTTCTTTTCTCTGTCAGGGTCAGAGTTCATTGAGATGTTTGTAGGAGTAGGAGCTTCTAGAGTAAGAGACTTGTTCAACAAGGCAAAAGAGACTTCGCCGTGCTTGGTTTTCATTGATGAAATTGATGCTGTTGGGAGGCAAAGAGGGACAGGAATTGGTGGAGGAAATGATGAGAGGGAGCAGACATTGAATCAGCTGCTTACTGAAATGGATGGATTTAGTGGGAACAGTGGAGTAATTGTTATTGCTGCTACTAATCGCCCTGAAATTCTTGATTCTGCTTTGCTTAGGCCCGGAAGGTTTGACAGACAAGTCACAGTTGGATTGCCAGATATTAAGGGAAGAAATGATATATTAAAGGTGCATAGTAGCAACAAGAAGCTTGATAAGAGTGTTTCTCTTGACATTATTGCTATGAGAACTCCTGGCTTCAGCGGTGCAGATCTTGCAAACCTCATGAATGAAGCTGCGATTCTTGCTGGCAGGAGAGGCAAAGATAAGATAACAATGAAAGAAATAGATGATTCGATTGATCGAATTGTTGCAGGGATGGAAGGCACCAAAATGACTGATGGAAAGAACAAAACTCTTGTGGCTTACCATGAAGTAGGCCACGCCATTTGCGCAACATTGACTCCAGGCCATGATCCAGTGCAGAAGGTCTCTCTTATTCCCCGAGGCCAAGCTCGAGGTCTCACATGGTTCTTACCGGGTGAAGATCCCGCTCTTATTTCTAAGCAACAGCTGTTTGCTAGAATAGTTGGAGGTCTAGGAGGTAGAGCAGCAGAAGAAGTAATTTTTGGAGAGCCAGAAATAACAACCGGTGCAGCAGGAGACTTGCAGCAGGTCACACAAATAGCAAGACAGATGGTAACAATGTTTGGCATGTCCGAGATTGGACCATGGGCATTGACAGACCCAGCGGCCCAAAGCAGTGATGTAGTGTTGAGGATGCTAGCAAGGAACACTATGTCCGAAAAACTTGCAGAGGATATTGACTTGTCAGTAAGACATATAGTTGAAAGTGCATACGAAGTTGCAAAGAAGCATATAAGGAATAACCGGGAAGCCATTGATAATTTAGTAGATGTACTATTAGAAAAGGAGATCCTCACCGGAGATGAGTTCAGGGCAATTCTGTCTGAATTTACTGATACTTCTATGGTAGAGCCGGATAGAAACTCGGTCAGGGAGATGATTGAAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009668 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext PPR Peptidase_M41

Protein Analysis

678

Amino Acids

73.65

Weight (kDa)

5.69

Isoelectric Point (pI)

40.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	79 - 153	1.1e-07	FtsH Extracellular
AAA	PF00004	252 - 384	8.7e-45	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	407 - 450	7.6e-14	AAA+ lid domain
Peptidase_M41	PF01434	465 - 655	7e-68	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15250 AT5G15250
fragaria_vesca	FvH4_6g48450 FvH4_6g48450 FvH4_6g48450
malus_domestica	MD09G1051800.v1.1
prunus_persica	Prupe.3G266900_v2.0.a1
pyrus_communis	pycom111g04310
rosa_chinensis	RchiOBHm_Chr2g0168361
rosa_laevigata	RLG00000021770
rosa_multiflora	Rmu_sc0003354.1_g000018
rosa_roxburghii	Rroxscaffold_2G00083110
rosa_rugosa	Rorug02G0533200.1
rosa_samantha	Rh2AG602300 Rh2BG615600 Rh2CG583300
rosa_wichuraiana	Rw0G019810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	16
AasI	GACNNNNNNGTC	1 cut(s)	1139
Acc16I	TGCGCA	1 cut(s)	1453
Acc36I	ACCTGC	2 cut(s)	16, 1663
AccB1I	GGYRCC	2 cut(s)	823, 1385
AccBSI	CCGCTC	1 cut(s)	1553
AccI	GTMKAC	1 cut(s)	306
AccII	CGCG	1 cut(s)	335
AciI	CCGC	5 cut(s)	728, 821, 1263, 1551, 1751
AclWI	GGATC	5 cut(s)	174, 187, 1469, 1541, 1930
AcsI	RAATTY	7 cut(s)	148, 502, 611, 698, 741, 1095, 1973
AcuI	CTGAAG	1 cut(s)	1243
AfaI	GTAC	3 cut(s)	278, 486, 1920
AfiI	CCNNNNNNNGG	2 cut(s)	632, 779
AgeI	ACCGGT	1 cut(s)	1649
AgsI	TTSAA	8 cut(s)	124, 246, 352, 698, 904, 1018, 1850, 2030
AjnI	CCWGG	7 cut(s)	51, 175, 394, 565, 772, 1252, 1465
AjuI	GAANNNNNNNTTGG	2 cut(s)	1611, 1643
AloI	GAACNNNNNNTCC	2 cut(s)	1784, 1816
Alw26I	GTCTC	6 cut(s)	114, 888, 911, 1495, 1526, 1656
AlwI	GGATC	5 cut(s)	174, 187, 1469, 1541, 1930
Ama87I	CYCGRG	2 cut(s)	1503, 1515
AoxI	GGCC	9 cut(s)	476, 571, 767, 801, 1118, 1438, 1468, 1507, 1752
ApeKI	GCWGC	9 cut(s)	449, 725, 818, 1024, 1076, 1295, 1610, 1655, 1669
ApoI	RAATTY	7 cut(s)	148, 502, 611, 698, 741, 1095, 1973
AsiGI	ACCGGT	1 cut(s)	1649
AsiSI	GCGATCGC	1 cut(s)	339
AspLEI	GCGC	1 cut(s)	1454
AspS9I	GGNCC	6 cut(s)	572, 767, 777, 1119, 1727, 1753
AsuC2I	CCSGG	4 cut(s)	634, 1122, 1539, 1892
AsuHPI	GGTGA	4 cut(s)	188, 546, 1553, 1933
AsuNHI	GCTAGC	1 cut(s)	1783
AvaI	CYCGRG	2 cut(s)	1503, 1515
AvaII	GGWCC	2 cut(s)	777, 1727
BamHI	GGATCC	1 cut(s)	179
BanI	GGYRCC	2 cut(s)	823, 1385
BanII	GRGCYC	1 cut(s)	230
BbvCI	CCTCAGC	1 cut(s)	416
BbvI	GCAGC	9 cut(s)	461, 712, 830, 1011, 1063, 1282, 1622, 1667, 1681
BccI	CCATC	4 cut(s)	1034, 1372, 1394, 1690
BceAI	ACGGC	1 cut(s)	910
BcgI	CGANNNNNNTGC	2 cut(s)	1793, 1827
BciT130I	CCWGG	7 cut(s)	53, 177, 396, 567, 774, 1254, 1467
BclI	TGATCA	1 cut(s)	316
BcnI	CCSGG	4 cut(s)	634, 1122, 1539, 1892
BcoDI	GTCTC	6 cut(s)	114, 888, 911, 1495, 1526, 1656
BfaI	CTAG	6 cut(s)	425, 885, 1581, 1598, 1784, 2035
BfmI	CTRYAG	1 cut(s)	480
BfuAI	ACCTGC	2 cut(s)	16, 1663
BglII	AGATCT	3 cut(s)	137, 345, 1270
BlpI	GCTNAGC	1 cut(s)	210
BmcAI	AGTACT	2 cut(s)	278, 486
Bme18I	GGWCC	2 cut(s)	777, 1727
BmeT110I	CYCGRG	2 cut(s)	1503, 1515
BmgT120I	GGNCC	6 cut(s)	572, 767, 777, 1119, 1727, 1753
BmiI	GGNNCC	6 cut(s)	181, 574, 624, 778, 825, 1387
BmsI	GCATC	3 cut(s)	245, 943, 1770
BmtI	GCTAGC	1 cut(s)	1787
BplI	GAGNNNNNCTC	2 cut(s)	1210, 1242
BpmI	CTGGAG	4 cut(s)	21, 356, 696, 1449
Bpu10I	CCTNAGC	3 cut(s)	216, 416, 1115
Bpu1102I	GCTNAGC	1 cut(s)	210
BpuEI	CTTGAG	1 cut(s)	247
BpuMI	CCSGG	4 cut(s)	634, 1122, 1539, 1892
BsaI	GGTCTC	2 cut(s)	1495, 1526
BsaJI	CCNNGG	7 cut(s)	51, 63, 458, 633, 773, 1504, 1730
BsaWI	WCCGGW	3 cut(s)	779, 1649, 1943
BsaXI	ACNNNNNCTCC	4 cut(s)	1053, 1083, 1447, 1477
Bsc4I	CCNNNNNNNGG	2 cut(s)	632, 779
Bse118I	RCCGGY	1 cut(s)	1649
Bse1I	ACTGG	3 cut(s)	38, 492, 1478
Bse3DI	GCAATG	2 cut(s)	788, 804
BseBI	CCWGG	7 cut(s)	53, 177, 396, 567, 774, 1254, 1467
BseDI	CCNNGG	7 cut(s)	51, 63, 458, 633, 773, 1504, 1730
BseGI	GGATG	5 cut(s)	289, 454, 1045, 1383, 1785
BseLI	CCNNNNNNNGG	2 cut(s)	632, 779
BseMI	GCAATG	2 cut(s)	788, 804
BseMII	CTCAG	2 cut(s)	201, 407
BseNI	ACTGG	3 cut(s)	38, 492, 1478
BseRI	GAGGAG	1 cut(s)	559
BseXI	GCAGC	9 cut(s)	461, 712, 830, 1011, 1063, 1282, 1622, 1667, 1681
BseYI	CCCAGC	3 cut(s)	656, 793, 1747
BsgI	GTGCAG	3 cut(s)	1287, 1502, 1674
Bsh1236I	CGCG	1 cut(s)	335
Bsh1285I	CGRYCG	1 cut(s)	339
BshFI	GGCC	9 cut(s)	478, 573, 769, 803, 1120, 1440, 1470, 1509, 1754
BshNI	GGYRCC	2 cut(s)	823, 1385
BshTI	ACCGGT	1 cut(s)	1649
BsiEI	CGRYCG	1 cut(s)	339
BsiHKCI	CYCGRG	2 cut(s)	1503, 1515
BsiSI	CCGG	8 cut(s)	633, 780, 1122, 1538, 1650, 1891, 1944, 2000
BslFI	GGGAC	2 cut(s)	790, 988
BslI	CCNNNNNNNGG	2 cut(s)	632, 779
BsmAI	GTCTC	6 cut(s)	114, 888, 911, 1495, 1526, 1656
BsmFI	GGGAC	2 cut(s)	790, 988
BsnI	GGCC	9 cut(s)	478, 573, 769, 803, 1120, 1440, 1470, 1509, 1754
Bso31I	GGTCTC	2 cut(s)	1495, 1526
BsoBI	CYCGRG	2 cut(s)	1503, 1515
Bsp1286I	GDGCHC	1 cut(s)	230
Bsp1720I	GCTNAGC	1 cut(s)	210
Bsp19I	CCATGG	1 cut(s)	1730
Bsp68I	TCGCGA	1 cut(s)	335
BspACI	CCGC	5 cut(s)	728, 821, 1263, 1551, 1751
BspANI	GGCC	9 cut(s)	478, 573, 769, 803, 1120, 1440, 1470, 1509, 1754
BspCNI	CTCAG	2 cut(s)	202, 408
BspFNI	CGCG	1 cut(s)	335
BspHI	TCATGA	1 cut(s)	1284
BspLI	GGNNCC	6 cut(s)	181, 574, 624, 778, 825, 1387
BspMAI	CTGCAG	1 cut(s)	484
BspMI	ACCTGC	2 cut(s)	16, 1663
BspOI	GCTAGC	1 cut(s)	1787
BspPI	GGATC	5 cut(s)	174, 187, 1469, 1541, 1930
BspT107I	GGYRCC	2 cut(s)	823, 1385
BspTNI	GGTCTC	2 cut(s)	1495, 1526
BsrBI	CCGCTC	1 cut(s)	1553
BsrDI	GCAATG	2 cut(s)	788, 804
BsrFI	RCCGGY	1 cut(s)	1649
BsrI	ACTGG	3 cut(s)	38, 492, 1478
BssAI	RCCGGY	1 cut(s)	1649
BssECI	CCNNGG	7 cut(s)	51, 63, 458, 633, 773, 1504, 1730
BssT1I	CCWWGG	3 cut(s)	63, 458, 1730
Bst2UI	CCWGG	7 cut(s)	53, 177, 396, 567, 774, 1254, 1467
Bst4CI	ACNGT	3 cut(s)	331, 1058, 1147
Bst6I	CTCTTC	1 cut(s)	423
BstAPI	GCANNNNNTGC	1 cut(s)	1274
BstC8I	GCNNGC	3 cut(s)	480, 1309, 1785
BstDEI	CTNAG	5 cut(s)	210, 216, 416, 1115, 1563
BstDSI	CCRYGG	1 cut(s)	1730
BstF5I	GGATG	5 cut(s)	289, 454, 1045, 1383, 1785
BstFNI	CGCG	1 cut(s)	335
BstHHI	GCGC	1 cut(s)	1454
BstMAI	GTCTC	6 cut(s)	114, 888, 911, 1495, 1526, 1656
BstMCI	CGRYCG	1 cut(s)	339
BstMWI	GCNNNNNNNGC	6 cut(s)	734, 815, 1274, 1304, 1317, 1451
BstNI	CCWGG	7 cut(s)	53, 177, 396, 567, 774, 1254, 1467
BstNSI	RCATGY	1 cut(s)	1717
BstSFI	CTRYAG	1 cut(s)	480
BstUI	CGCG	1 cut(s)	335
BstV1I	GCAGC	9 cut(s)	461, 712, 830, 1011, 1063, 1282, 1622, 1667, 1681
BstX2I	RGATCY	6 cut(s)	137, 179, 345, 1270, 1546, 1935
BstYI	RGATCY	6 cut(s)	137, 179, 345, 1270, 1546, 1935
BsuRI	GGCC	9 cut(s)	478, 573, 769, 803, 1120, 1440, 1470, 1509, 1754
BtgI	CCRYGG	1 cut(s)	1730
BtsCI	GGATG	5 cut(s)	289, 454, 1045, 1383, 1785
BtsI	GCAGTG	1 cut(s)	1768
BtsIMutI	CAGTG	4 cut(s)	515, 1063, 1485, 1768
BtuMI	TCGCGA	1 cut(s)	335
BveI	ACCTGC	2 cut(s)	16, 1663
Cac8I	GCNNGC	3 cut(s)	480, 1309, 1785
CciI	TCATGA	1 cut(s)	1284
CfoI	GCGC	1 cut(s)	1454
Cfr10I	RCCGGY	1 cut(s)	1649
Cfr13I	GGNCC	6 cut(s)	572, 767, 777, 1119, 1727, 1753
Csp6I	GTAC	3 cut(s)	277, 485, 1919
CspAI	ACCGGT	1 cut(s)	1649
CspCI	CAANNNNNGTGG	6 cut(s)	393, 428, 447, 482, 1430, 1465
CviAII	CATG	7 cut(s)	99, 1285, 1430, 1472, 1527, 1714, 1731
CviQI	GTAC	3 cut(s)	277, 485, 1919
DdeI	CTNAG	5 cut(s)	210, 216, 416, 1115, 1563
DrdI	GACNNNNNNGTC	1 cut(s)	1139
DseDI	GACNNNNNNGTC	1 cut(s)	1139
Eam1104I	CTCTTC	1 cut(s)	423
EarI	CTCTTC	1 cut(s)	423
Eco130I	CCWWGG	3 cut(s)	63, 458, 1730
Eco24I	GRGCYC	1 cut(s)	230
Eco31I	GGTCTC	2 cut(s)	1495, 1526
Eco47I	GGWCC	2 cut(s)	777, 1727
Eco57I	CTGAAG	1 cut(s)	1243
Eco88I	CYCGRG	2 cut(s)	1503, 1515
EcoO109I	RGGNCCY	1 cut(s)	572
EcoRI	GAATTC	1 cut(s)	741
EcoRII	CCWGG	7 cut(s)	51, 175, 394, 565, 772, 1252, 1465
EcoT14I	CCWWGG	3 cut(s)	63, 458, 1730
EcoT38I	GRGCYC	1 cut(s)	230
ErhI	CCWWGG	3 cut(s)	63, 458, 1730
FaeI	CATG	7 cut(s)	102, 1288, 1433, 1475, 1530, 1717, 1734
FalI	AAGNNNNNCTT	2 cut(s)	741, 773
FaqI	GGGAC	2 cut(s)	790, 988
FatI	CATG	7 cut(s)	98, 1284, 1429, 1471, 1526, 1713, 1730
FauI	CCCGC	1 cut(s)	1558
FbaI	TGATCA	1 cut(s)	316
FblI	GTMKAC	1 cut(s)	306
FokI	GGATG	5 cut(s)	296, 441, 1052, 1390, 1792
FriOI	GRGCYC	1 cut(s)	230
FspBI	CTAG	6 cut(s)	425, 885, 1581, 1598, 1784, 2035
FspI	TGCGCA	1 cut(s)	1453
GlaI	GCGC	1 cut(s)	1453
GsaI	CCCAGC	3 cut(s)	660, 797, 1751
GsuI	CTGGAG	4 cut(s)	21, 356, 696, 1449
HaeIII	GGCC	9 cut(s)	478, 573, 769, 803, 1120, 1440, 1470, 1509, 1754
HapII	CCGG	8 cut(s)	633, 780, 1122, 1538, 1650, 1891, 1944, 2000
HhaI	GCGC	1 cut(s)	1454
Hin1II	CATG	7 cut(s)	102, 1288, 1433, 1475, 1530, 1717, 1734
Hin6I	GCGC	1 cut(s)	1452
HinP1I	GCGC	1 cut(s)	1452
HindIII	AAGCTT	1 cut(s)	1208
HinfI	GANTC	8 cut(s)	165, 267, 378, 1018, 1103, 1300, 1352, 1462
HpaII	CCGG	8 cut(s)	633, 780, 1122, 1538, 1650, 1891, 1944, 2000
HphI	GGTGA	4 cut(s)	188, 546, 1553, 1933
Hpy166II	GTNNAC	1 cut(s)	307
Hpy188I	TCNGA	6 cut(s)	321, 383, 850, 1720, 1804, 1972
Hpy188III	TCNNGA	8 cut(s)	264, 334, 373, 713, 885, 1100, 1229, 1285
Hpy8I	GTNNAC	1 cut(s)	307
HpyAV	CCTTC	6 cut(s)	281, 295, 591, 1119, 1376, 1480
HpyCH4III	ACNGT	3 cut(s)	331, 1058, 1147
HpyF10VI	GCNNNNNNNGC	6 cut(s)	734, 815, 1274, 1304, 1317, 1451
HpyF3I	CTNAG	5 cut(s)	210, 216, 416, 1115, 1563
Hsp92II	CATG	7 cut(s)	102, 1288, 1433, 1475, 1530, 1717, 1734
HspAI	GCGC	1 cut(s)	1452
Ksp22I	TGATCA	1 cut(s)	316
LmnI	GCTCC	4 cut(s)	375, 600, 878, 1006
Lsp1109I	GCAGC	9 cut(s)	461, 712, 830, 1011, 1063, 1282, 1622, 1667, 1681
LweI	GCATC	3 cut(s)	245, 943, 1770
MaeI	CTAG	6 cut(s)	425, 885, 1581, 1598, 1784, 2035
MaeIII	GTNAC	6 cut(s)	3, 101, 637, 1141, 1675, 1699
MbiI	CCGCTC	1 cut(s)	1553
MboII	GAAGA	7 cut(s)	147, 340, 440, 445, 1182, 1556, 1628
MflI	RGATCY	6 cut(s)	137, 179, 345, 1270, 1546, 1935
MhlI	GDGCHC	1 cut(s)	230
MlyI	GAGTC	3 cut(s)	159, 387, 1456
MmeI	TCCRAC	2 cut(s)	1129, 1570
MseI	TTAA	3 cut(s)	146, 1164, 1184
MslI	CAYNNNNRTG	2 cut(s)	860, 1391
MspA1I	CMGCKG	5 cut(s)	821, 1024, 1263, 1573, 1751
MspI	CCGG	8 cut(s)	633, 780, 1122, 1538, 1650, 1891, 1944, 2000
MvaI	CCWGG	7 cut(s)	53, 177, 396, 567, 774, 1254, 1467
MvnI	CGCG	1 cut(s)	335
MwoI	GCNNNNNNNGC	6 cut(s)	734, 815, 1274, 1304, 1317, 1451
NciI	CCSGG	4 cut(s)	634, 1122, 1539, 1892
NcoI	CCATGG	1 cut(s)	1730
NheI	GCTAGC	1 cut(s)	1783
NlaIII	CATG	7 cut(s)	102, 1288, 1433, 1475, 1530, 1717, 1734
NlaIV	GGNNCC	6 cut(s)	181, 574, 624, 778, 825, 1387
NmeAIII	GCCGAG	1 cut(s)	367
NmuCI	GTSAC	4 cut(s)	3, 101, 1141, 1675
NruI	TCGCGA	1 cut(s)	335
NsbI	TGCGCA	1 cut(s)	1453
NspI	RCATGY	1 cut(s)	1717
PaeR7I	CTCGAG	1 cut(s)	1515
PagI	TCATGA	1 cut(s)	1284
PaqCI	CACCTGC	1 cut(s)	16
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PfeI	GAWTC	5 cut(s)	267, 1018, 1103, 1300, 1352
PinAI	ACCGGT	1 cut(s)	1649
Ple19I	CGATCG	1 cut(s)	339
PleI	GAGTC	3 cut(s)	159, 386, 1456
PpsI	GAGTC	3 cut(s)	159, 386, 1456
Psp6I	CCWGG	7 cut(s)	51, 175, 394, 565, 772, 1252, 1465
PspFI	CCCAGC	3 cut(s)	656, 793, 1747
PspGI	CCWGG	7 cut(s)	51, 175, 394, 565, 772, 1252, 1465
PspN4I	GGNNCC	6 cut(s)	181, 574, 624, 778, 825, 1387
PspPI	GGNCC	6 cut(s)	572, 767, 777, 1119, 1727, 1753
PspXI	VCTCGAGB	1 cut(s)	1515
PstI	CTGCAG	1 cut(s)	484
PsuI	RGATCY	6 cut(s)	137, 179, 345, 1270, 1546, 1935
PvuI	CGATCG	1 cut(s)	339
PvuII	CAGCTG	2 cut(s)	1024, 1573
RgaI	GCGATCGC	1 cut(s)	339
RruI	TCGCGA	1 cut(s)	335
RsaI	GTAC	3 cut(s)	278, 486, 1920
RsaNI	GTAC	3 cut(s)	277, 485, 1919
RseI	CAYNNNNRTG	2 cut(s)	860, 1391
SaqAI	TTAA	3 cut(s)	146, 1164, 1184
Sau96I	GGNCC	6 cut(s)	572, 767, 777, 1119, 1727, 1753
ScaI	AGTACT	2 cut(s)	278, 486
SchI	GAGTC	3 cut(s)	159, 387, 1456
SduI	GDGCHC	1 cut(s)	230
SfaAI	GCGATCGC	1 cut(s)	339
SfaNI	GCATC	3 cut(s)	245, 943, 1770
SfcI	CTRYAG	1 cut(s)	480
Sfr274I	CTCGAG	1 cut(s)	1515
SgfI	GCGATCGC	1 cut(s)	339
SinI	GGWCC	2 cut(s)	777, 1727
SlaI	CTCGAG	1 cut(s)	1515
SmiMI	CAYNNNNRTG	2 cut(s)	860, 1391
SmlI	CTYRAG	2 cut(s)	262, 1515
SmoI	CTYRAG	2 cut(s)	262, 1515
SsiI	CCGC	5 cut(s)	728, 821, 1263, 1551, 1751
SspMI	CTAG	6 cut(s)	425, 885, 1581, 1598, 1784, 2035
StyI	CCWWGG	3 cut(s)	63, 458, 1730
TaaI	ACNGT	3 cut(s)	331, 1058, 1147
TaqI	TCGA	5 cut(s)	133, 663, 1355, 1363, 1516
TaqII	GACCGA	1 cut(s)	2002
TatI	WGTACW	3 cut(s)	276, 484, 1918
TauI	GCSGC	1 cut(s)	1754
TfiI	GAWTC	5 cut(s)	267, 1018, 1103, 1300, 1352
Tru1I	TTAA	3 cut(s)	146, 1164, 1184
Tru9I	TTAA	3 cut(s)	146, 1164, 1184
TscAI	CASTG	4 cut(s)	522, 1063, 1485, 1768
TseFI	GTSAC	4 cut(s)	3, 101, 1141, 1675
TseI	GCWGC	9 cut(s)	449, 725, 818, 1024, 1076, 1295, 1610, 1655, 1669
Tsp45I	GTSAC	4 cut(s)	3, 101, 1141, 1675
TspRI	CASTG	4 cut(s)	522, 1063, 1485, 1768
VpaK11BI	GGWCC	2 cut(s)	777, 1727
XapI	RAATTY	7 cut(s)	148, 502, 611, 698, 741, 1095, 1973
XbaI	TCTAGA	1 cut(s)	884
XceI	RCATGY	1 cut(s)	1717
XcmI	CCANNNNNNNNNTGG	1 cut(s)	616
XhoI	CTCGAG	1 cut(s)	1515
XmiI	GTMKAC	1 cut(s)	306
XspI	CTAG	6 cut(s)	425, 885, 1581, 1598, 1784, 2035
ZrmI	AGTACT	2 cut(s)	278, 486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.