Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0013820

Physical Location & Seq

Genomic Coordinates Reverse (-)

3459564 .. 3462639

Gene Structure 3076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1051800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGTCACCTGCTCTCTGCCTCTCAATCTCTCTCTCTCCACTCTGCAAATCCCAGGACATTTCAAAGGACACCCAACTCCCCAAAAACCCTAAAAAACAGAACCCATGTCACAAAACTCCCTCAAACTTCAAATCTACCAGAAGGTCGCTGTTAAATTCCACTTCACTGGGACTGACCCTGTTAGGAGCTGCAGGACCCCTCTCTGTTTCTAACCCTGCAAAAGCAGAGCCAGAGCCAGAGAGCCCGGCCGCGTCGACTTCGAGCAGAATGTCATACTCCAGGTTCTTGGAATACTTGGACCAAGACGCTGTGAAGAAGGTGGACTTGTTTGAGAACGGCACCGTCGCGATCGCCGAGATTTTTAATCCGGCGTTGGAAAAAGTCCAGAGGGTTAAGATTCAGTTGCCTGGACTGCCACCGGAGCTGCTGAGGAAAATGAGACAGAAGAACGTAGATTTTGCAGCTCATCCAATGGAGGTTAATTGGTTGCCTGCAGTGCTGGATTTGTTGGGAAATTTTGCTTTTCCTTTGATCCTGCTCGGGACATTGCTGTTGAGGAGTAGTTCTTCAAACGTGCCAGGAGGCCCCAACTTGCCTTTTGGACTTGGAAGGAGCACAGCCAAGTTTCAGATGGAGCCCAATACAGGGGTGACATTTGATGATGTGGCCGGAGTCGATGAAGCAAAGCAAGATTTCCAAGAGATTGTTGAATTCCTGAAAACCCCAGAAAAGTTTTCTGCAGTTGGAGCAAGAATTCCCAAAGGGGTTCTTCTTGTGGGGCCGCCAGGGACCGGAAAGACACTGCTGGCCAAGGCCATTGCAGGTGAAGCGGGAGTGCCTTTTTTCTCTCTGTCGGGATCAGAGTTCATTGAGATGTTTGTGGGAGTAGGAGCTTCTAGGGTTAGAGATTTGTTCAACAAGGCGAAGGCGAATTCTCCGTGCCTGGTTTTCATTGACGAGATAGATGCTGTGGGGAGGCAGAGAGGCACAGGAATCGGCGGCGGAAATGATGAGAGGGAGCAAACTCTGAATCAGCTGCTCACTGAAATGGATGGGTTTAGTGGGAACAGTGGAGTGATTGTCATCGCCGCCACAAACCGCCCTGAAATTCTTGATTCTGCTTTGCTTAGGGCTGGCAGATTCGACAGGCAGGTTAGCGTTGGATTACCGGATATAAGGGGAAGAGAAGAGATGCTAAAAGTTCACAGCAGCAATAAGAGGCTTGATAAGGATGTTTCTCTGAGTGTTATTGCCATGAGAACTCCTGGATTCAGCGGTGCAGACCTTGCAAACCTCATGAATGAAGCTGCCATTCTTGCTGGTAGGAGAGGCAAAAATCAGATAACAATGAAGGAAATCGATGACTCGATTGATCGAATTGTGGCAGGGATGGAAGGCACAAAAATGACTGATGGGAAGAGCCGAGTTCTTGTGGCTTATCATGAAGTTGGCCACGCTATTTGTGCGACACTGACTCCCGGCCACGATCCAGTGCAGAAGGTCTCCTTGATTCCTCGAGGCCAAGCACGCGGTTTGACATGGTTCATACCAGGCGAAGATCCTACTCTTGTTTCTAAGCAACAACTATTTGCTAGAATAGTTGGAGGTCTAGGAGGTAGGGCAGCAGAAGAGGTGATTTTTGGGGAACCAGAAATAACAACTGGTGCAGCAGGAGACTTGCAACAAGTCACACAGATAGCAAGACAGATGGTGACAATGTTTGGGATGTCGGAGATTGGACCCTGGGCGCTGATAGATCCGGCAACACAAAACAGCGATGTCGTGCTGAGGATGCTGGCAAGAAACATCATGTCTGAGAAGCTGGCGGAGGACATTGATTTGTCAGTGAGACAGATAATTGAAAACGCATATGAGATGGCTAAGAAGCATGTGAGGAACAACAGGGAGGCCATTGATAAGTTAGTAGAAGTGCTTTTGGAAAAGGAGATTCTCACAGGAGATGAATTCAGAGCAATTCTTTCTGAATTCACAGATACTTCTATGGCAAAGTTGGATAGGAAATCAGTAAGGGCGATGATTGAAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009668 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext PPR Peptidase_M41

Protein Analysis

683

Amino Acids

73.82

Weight (kDa)

6.29

Isoelectric Point (pI)

39.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	84 - 157	7.1e-07	FtsH Extracellular
AAA	PF00004	256 - 388	2.1e-46	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	411 - 454	3.7e-14	AAA+ lid domain
Peptidase_M41	PF01434	469 - 659	6.9e-67	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15250 AT5G15250
fragaria_vesca	FvH4_6g48450 FvH4_6g48450 FvH4_6g48450
malus_domestica	MD09G1051800.v1.1
prunus_persica	Prupe.3G266900_v2.0.a1
pyrus_communis	pycom111g04310
rosa_chinensis	RchiOBHm_Chr2g0168361
rosa_laevigata	RLG00000021770
rosa_multiflora	Rmu_sc0003354.1_g000018
rosa_roxburghii	Rroxscaffold_2G00083110
rosa_rugosa	Rorug02G0533200.1
rosa_samantha	Rh2AG602300 Rh2BG615600 Rh2CG583300
rosa_wichuraiana	Rw0G019810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	16, 812
AbsI	CCTCGAGG	1 cut(s)	1515
Acc36I	ACCTGC	3 cut(s)	16, 812, 1141
AccB1I	GGYRCC	1 cut(s)	338
AccI	GTMKAC	1 cut(s)	254
AccII	CGCG	3 cut(s)	251, 347, 1530
AclWI	GGATC	5 cut(s)	526, 865, 1481, 1553, 1751
AcoI	YGGCCR	5 cut(s)	246, 666, 807, 1450, 1480
AcsI	RAATTY	8 cut(s)	154, 514, 710, 753, 931, 1107, 1964, 1985
AfiI	CCNNNNNNNGG	3 cut(s)	644, 645, 791
AgsI	TTSAA	7 cut(s)	63, 130, 570, 710, 916, 1862, 2042
AjnI	CCWGG	9 cut(s)	51, 278, 406, 577, 784, 942, 1264, 1549, 1742
AluBI	AGCT	7 cut(s)	188, 424, 464, 893, 1036, 1307, 1822
AluI	AGCT	7 cut(s)	188, 424, 464, 893, 1036, 1307, 1822
Alw21I	GWGCWC	1 cut(s)	617
Alw26I	GTCTC	4 cut(s)	433, 1507, 1668, 1843
AlwI	GGATC	5 cut(s)	526, 865, 1481, 1553, 1751
Ama87I	CYCGRG	2 cut(s)	539, 1515
ApeKI	GCWGC	8 cut(s)	188, 424, 461, 1036, 1209, 1307, 1622, 1667
ApoI	RAATTY	8 cut(s)	154, 514, 710, 753, 931, 1107, 1964, 1985
AsiSI	GCGATCGC	1 cut(s)	351
AspLEI	GCGC	1 cut(s)	1750
AspS9I	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
AsuC2I	CCSGG	2 cut(s)	245, 1479
AsuHPI	GGTGA	4 cut(s)	661, 836, 1645, 1723
AvaI	CYCGRG	2 cut(s)	539, 1515
AvaII	GGWCC	4 cut(s)	194, 298, 789, 1739
BalI	TGGCCA	2 cut(s)	809, 1452
BanI	GGYRCC	1 cut(s)	338
BanII	GRGCYC	2 cut(s)	245, 639
Bbv12I	GWGCWC	1 cut(s)	617
BbvCI	CCTCAGC	2 cut(s)	428, 1787
BbvI	GCAGC	8 cut(s)	175, 411, 473, 1023, 1221, 1294, 1634, 1679
BccI	CCATC	6 cut(s)	625, 1046, 1384, 1406, 1702, 1870
BceAI	ACGGC	1 cut(s)	352
BcgI	CGANNNNNNTGC	4 cut(s)	947, 976, 981, 1010
BciT130I	CCWGG	9 cut(s)	53, 280, 408, 579, 786, 944, 1266, 1551, 1744
BcnI	CCSGG	2 cut(s)	245, 1479
BcoDI	GTCTC	4 cut(s)	433, 1507, 1668, 1843
BfaI	CTAG	4 cut(s)	897, 1593, 1610, 2047
BfmI	CTRYAG	3 cut(s)	189, 492, 738
BfoI	RGCGCY	1 cut(s)	1751
BfuAI	ACCTGC	3 cut(s)	16, 812, 1141
Bme18I	GGWCC	4 cut(s)	194, 298, 789, 1739
BmeT110I	CYCGRG	2 cut(s)	539, 1515
BmgT120I	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
BmiI	GGNNCC	8 cut(s)	196, 340, 586, 636, 780, 790, 1647, 1741
BmrI	ACTGGG	1 cut(s)	176
BmsI	GCATC	3 cut(s)	955, 1182, 1782
BmuI	ACTGGG	1 cut(s)	176
BpmI	CTGGAG	1 cut(s)	262
Bpu10I	CCTNAGC	3 cut(s)	428, 1127, 1787
BpuMI	CCSGG	2 cut(s)	245, 1479
Bsa29I	ATCGAT	1 cut(s)	1359
BsaBI	GATNNNNATC	1 cut(s)	1082
BsaI	GGTCTC	1 cut(s)	1507
BsaJI	CCNNGG	5 cut(s)	51, 785, 810, 1742, 1743
BsaWI	WCCGGW	3 cut(s)	418, 791, 1168
BsaXI	ACNNNNNCTCC	4 cut(s)	1065, 1095, 1459, 1489
Bsc4I	CCNNNNNNNGG	3 cut(s)	644, 645, 791
Bse1I	ACTGG	3 cut(s)	171, 1490, 1666
Bse3DI	GCAATG	2 cut(s)	545, 816
Bse8I	GATNNNNATC	1 cut(s)	1082
BseBI	CCWGG	9 cut(s)	53, 280, 408, 579, 786, 944, 1266, 1551, 1744
BseCI	ATCGAT	1 cut(s)	1359
BseDI	CCNNGG	5 cut(s)	51, 785, 810, 1742, 1743
BseGI	GGATG	6 cut(s)	466, 1057, 1237, 1395, 1731, 1797
BseJI	GATNNNNATC	1 cut(s)	1082
BseLI	CCNNNNNNNGG	3 cut(s)	644, 645, 791
BseMI	GCAATG	2 cut(s)	545, 816
BseMII	CTCAG	4 cut(s)	419, 1232, 1778, 1806
BseNI	ACTGG	3 cut(s)	171, 1490, 1666
BseRI	GAGGAG	1 cut(s)	571
BseX3I	CGGCCG	1 cut(s)	246
BseXI	GCAGC	8 cut(s)	175, 411, 473, 1023, 1221, 1294, 1634, 1679
BsgI	GTGCAG	3 cut(s)	1299, 1514, 1686
Bsh1236I	CGCG	3 cut(s)	251, 347, 1530
Bsh1285I	CGRYCG	2 cut(s)	249, 351
BshNI	GGYRCC	1 cut(s)	338
BshVI	ATCGAT	1 cut(s)	1359
BsiEI	CGRYCG	2 cut(s)	249, 351
BsiHKAI	GWGCWC	1 cut(s)	617
BsiHKCI	CYCGRG	2 cut(s)	539, 1515
BsiSI	CCGG	8 cut(s)	245, 368, 419, 669, 792, 1169, 1479, 1760
BslFI	GGGAC	3 cut(s)	183, 556, 802
BslI	CCNNNNNNNGG	3 cut(s)	644, 645, 791
BsmAI	GTCTC	4 cut(s)	433, 1507, 1668, 1843
BsmFI	GGGAC	3 cut(s)	183, 556, 802
Bso31I	GGTCTC	1 cut(s)	1507
BsoBI	CYCGRG	2 cut(s)	539, 1515
Bsp1286I	GDGCHC	3 cut(s)	245, 617, 639
Bsp143I	GATC	7 cut(s)	348, 531, 857, 1372, 1486, 1558, 1756
Bsp68I	TCGCGA	1 cut(s)	347
BspCNI	CTCAG	4 cut(s)	420, 1233, 1779, 1807
BspDI	ATCGAT	1 cut(s)	1359
BspFNI	CGCG	3 cut(s)	251, 347, 1530
BspHI	TCATGA	2 cut(s)	1296, 1441
BspLI	GGNNCC	8 cut(s)	196, 340, 586, 636, 780, 790, 1647, 1741
BspMAI	CTGCAG	3 cut(s)	193, 496, 742
BspMI	ACCTGC	3 cut(s)	16, 812, 1141
BspPI	GGATC	5 cut(s)	526, 865, 1481, 1553, 1751
BspQI	GCTCTTC	1 cut(s)	1412
BspT107I	GGYRCC	1 cut(s)	338
BspTNI	GGTCTC	1 cut(s)	1507
BsrDI	GCAATG	2 cut(s)	545, 816
BsrI	ACTGG	3 cut(s)	171, 1490, 1666
BssECI	CCNNGG	5 cut(s)	51, 785, 810, 1742, 1743
BssMI	GATC	7 cut(s)	348, 531, 857, 1372, 1486, 1558, 1756
BssT1I	CCWWGG	1 cut(s)	810
Bst2UI	CCWGG	9 cut(s)	53, 280, 408, 579, 786, 944, 1266, 1551, 1744
Bst4CI	ACNGT	2 cut(s)	343, 1070
Bst6I	CTCTTC	4 cut(s)	1177, 1182, 1412, 1623
BstAPI	GCANNNNNTGC	1 cut(s)	1286
BstC8I	GCNNGC	6 cut(s)	492, 807, 1135, 1528, 1797, 1824
BstDEI	CTNAG	7 cut(s)	428, 1127, 1241, 1575, 1787, 1815, 1881
BstF5I	GGATG	6 cut(s)	466, 1057, 1237, 1395, 1731, 1797
BstFNI	CGCG	3 cut(s)	251, 347, 1530
BstH2I	RGCGCY	1 cut(s)	1751
BstHHI	GCGC	1 cut(s)	1750
BstKTI	GATC	7 cut(s)	351, 534, 860, 1375, 1489, 1561, 1759
BstMAI	GTCTC	4 cut(s)	433, 1507, 1668, 1843
BstMBI	GATC	7 cut(s)	348, 531, 857, 1372, 1486, 1558, 1756
BstMCI	CGRYCG	2 cut(s)	249, 351
BstNI	CCWGG	9 cut(s)	53, 280, 408, 579, 786, 944, 1266, 1551, 1744
BstNSI	RCATGY	1 cut(s)	1892
BstSFI	CTRYAG	3 cut(s)	189, 492, 738
BstUI	CGCG	3 cut(s)	251, 347, 1530
BstV1I	GCAGC	8 cut(s)	175, 411, 473, 1023, 1221, 1294, 1634, 1679
BstX2I	RGATCY	2 cut(s)	1558, 1756
BstXI	CCANNNNNNTGG	2 cut(s)	166, 286
BstYI	RGATCY	2 cut(s)	1558, 1756
BstZI	CGGCCG	1 cut(s)	246
Bsu15I	ATCGAT	1 cut(s)	1359
BsuTUI	ATCGAT	1 cut(s)	1359
BtgZI	GCGATG	2 cut(s)	1069, 1791
BtsCI	GGATG	6 cut(s)	466, 1057, 1237, 1395, 1731, 1797
BtsI	GCAGTG	2 cut(s)	501, 800
BtsIMutI	CAGTG	8 cut(s)	164, 501, 800, 1041, 1075, 1469, 1497, 1851
BtuMI	TCGCGA	1 cut(s)	347
BveI	ACCTGC	3 cut(s)	16, 812, 1141
Cac8I	GCNNGC	6 cut(s)	492, 807, 1135, 1528, 1797, 1824
CciI	TCATGA	2 cut(s)	1296, 1441
CfoI	GCGC	1 cut(s)	1750
Cfr13I	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
ClaI	ATCGAT	1 cut(s)	1359
CseI	GACGC	2 cut(s)	240, 314
CspCI	CAANNNNNGTGG	2 cut(s)	1442, 1477
CviAII	CATG	7 cut(s)	105, 1255, 1297, 1442, 1539, 1810, 1889
DdeI	CTNAG	7 cut(s)	428, 1127, 1241, 1575, 1787, 1815, 1881
DpnI	GATC	7 cut(s)	350, 533, 859, 1374, 1488, 1560, 1758
DpnII	GATC	7 cut(s)	348, 531, 857, 1372, 1486, 1558, 1756
EaeI	YGGCCR	5 cut(s)	246, 666, 807, 1450, 1480
EagI	CGGCCG	1 cut(s)	246
Eam1104I	CTCTTC	4 cut(s)	1177, 1182, 1412, 1623
EarI	CTCTTC	4 cut(s)	1177, 1182, 1412, 1623
EciI	GGCGGA	2 cut(s)	1017, 1841
EclXI	CGGCCG	1 cut(s)	246
Eco130I	CCWWGG	1 cut(s)	810
Eco24I	GRGCYC	2 cut(s)	245, 639
Eco31I	GGTCTC	1 cut(s)	1507
Eco47I	GGWCC	4 cut(s)	194, 298, 789, 1739
Eco52I	CGGCCG	1 cut(s)	246
Eco88I	CYCGRG	2 cut(s)	539, 1515
EcoO109I	RGGNCCY	2 cut(s)	194, 584
EcoRI	GAATTC	5 cut(s)	710, 753, 931, 1964, 1985
EcoRII	CCWGG	9 cut(s)	51, 278, 406, 577, 784, 942, 1264, 1549, 1742
EcoT14I	CCWWGG	1 cut(s)	810
EcoT38I	GRGCYC	2 cut(s)	245, 639
ErhI	CCWWGG	1 cut(s)	810
FaeI	CATG	7 cut(s)	108, 1258, 1300, 1445, 1542, 1813, 1892
FalI	AAGNNNNNCTT	6 cut(s)	308, 340, 753, 785, 1490, 1522
FaqI	GGGAC	3 cut(s)	183, 556, 802
FatI	CATG	7 cut(s)	104, 1254, 1296, 1441, 1538, 1809, 1888
FauI	CCCGC	1 cut(s)	823
FauNDI	CATATG	1 cut(s)	1870
FblI	GTMKAC	1 cut(s)	254
FokI	GGATG	6 cut(s)	453, 1064, 1244, 1402, 1738, 1804
FriOI	GRGCYC	2 cut(s)	245, 639
FspBI	CTAG	4 cut(s)	897, 1593, 1610, 2047
GlaI	GCGC	1 cut(s)	1749
GsuI	CTGGAG	1 cut(s)	262
HaeII	RGCGCY	1 cut(s)	1751
HapII	CCGG	8 cut(s)	245, 368, 419, 669, 792, 1169, 1479, 1760
HgaI	GACGC	2 cut(s)	240, 314
HhaI	GCGC	1 cut(s)	1750
Hin1II	CATG	7 cut(s)	108, 1258, 1300, 1445, 1542, 1813, 1892
Hin6I	GCGC	1 cut(s)	1748
HinP1I	GCGC	1 cut(s)	1748
HincII	GTYRAC	1 cut(s)	255
HindII	GTYRAC	1 cut(s)	255
HpaII	CCGG	8 cut(s)	245, 368, 419, 669, 792, 1169, 1479, 1760
HphI	GGTGA	4 cut(s)	661, 836, 1645, 1723
Hpy166II	GTNNAC	3 cut(s)	255, 322, 1204
Hpy188I	TCNGA	9 cut(s)	630, 862, 1029, 1242, 1341, 1732, 1816, 1970, 1984
Hpy188III	TCNNGA	8 cut(s)	346, 385, 541, 715, 855, 1112, 1297, 1442
Hpy8I	GTNNAC	3 cut(s)	255, 322, 1204
Hpy99I	CGWCG	2 cut(s)	256, 347
HpyAV	CCTTC	7 cut(s)	135, 310, 603, 919, 1345, 1388, 1492
HpyCH4III	ACNGT	2 cut(s)	343, 1070
HpyCH4IV	ACGT	2 cut(s)	450, 573
HpyF3I	CTNAG	7 cut(s)	428, 1127, 1241, 1575, 1787, 1815, 1881
HpySE526I	ACGT	2 cut(s)	450, 573
Hsp92II	CATG	7 cut(s)	108, 1258, 1300, 1445, 1542, 1813, 1892
HspAI	GCGC	1 cut(s)	1748
Kzo9I	GATC	7 cut(s)	348, 531, 857, 1372, 1486, 1558, 1756
LguI	GCTCTTC	1 cut(s)	1412
LmnI	GCTCC	7 cut(s)	185, 421, 612, 634, 746, 890, 1018
Lsp1109I	GCAGC	8 cut(s)	175, 411, 473, 1023, 1221, 1294, 1634, 1679
LweI	GCATC	3 cut(s)	955, 1182, 1782
MaeI	CTAG	4 cut(s)	897, 1593, 1610, 2047
MaeII	ACGT	2 cut(s)	450, 573
MaeIII	GTNAC	5 cut(s)	3, 107, 649, 1687, 1711
MalI	GATC	7 cut(s)	350, 533, 859, 1374, 1488, 1560, 1758
MboI	GATC	7 cut(s)	348, 531, 857, 1372, 1486, 1558, 1756
MboII	GAAGA	9 cut(s)	325, 457, 558, 761, 1194, 1199, 1429, 1568, 1640
MflI	RGATCY	2 cut(s)	1558, 1756
MhlI	GDGCHC	3 cut(s)	245, 617, 639
MlsI	TGGCCA	2 cut(s)	809, 1452
MluNI	TGGCCA	2 cut(s)	809, 1452
MlyI	GAGTC	3 cut(s)	681, 1358, 1468
MmeI	TCCRAC	6 cut(s)	354, 724, 1141, 1582, 1710, 1992
Mox20I	TGGCCA	2 cut(s)	809, 1452
MscI	TGGCCA	2 cut(s)	809, 1452
MseI	TTAA	4 cut(s)	152, 363, 393, 480
MslI	CAYNNNNRTG	3 cut(s)	872, 1046, 1403
Msp20I	TGGCCA	2 cut(s)	809, 1452
MspA1I	CMGCKG	2 cut(s)	1036, 1275
MspI	CCGG	8 cut(s)	245, 368, 419, 669, 792, 1169, 1479, 1760
MvaI	CCWGG	9 cut(s)	53, 280, 408, 579, 786, 944, 1266, 1551, 1744
MvnI	CGCG	3 cut(s)	251, 347, 1530
NciI	CCSGG	2 cut(s)	245, 1479
NdeI	CATATG	1 cut(s)	1870
NdeII	GATC	7 cut(s)	348, 531, 857, 1372, 1486, 1558, 1756
NlaIII	CATG	7 cut(s)	108, 1258, 1300, 1445, 1542, 1813, 1892
NlaIV	GGNNCC	8 cut(s)	196, 340, 586, 636, 780, 790, 1647, 1741
NmeAIII	GCCGAG	2 cut(s)	379, 1448
NmuCI	GTSAC	5 cut(s)	3, 107, 649, 1687, 1711
NruI	TCGCGA	1 cut(s)	347
NspI	RCATGY	1 cut(s)	1892
PaeR7I	CTCGAG	1 cut(s)	1515
PagI	TCATGA	2 cut(s)	1296, 1441
PaqCI	CACCTGC	2 cut(s)	16, 812
PasI	CCCWGGG	1 cut(s)	1743
PciSI	GCTCTTC	1 cut(s)	1412
PcsI	WCGNNNNNNNCGW	1 cut(s)	351
PfeI	GAWTC	8 cut(s)	397, 993, 1030, 1115, 1140, 1269, 1510, 1948
PfoI	TCCNGGA	1 cut(s)	1264
Ple19I	CGATCG	1 cut(s)	351
PleI	GAGTC	3 cut(s)	680, 1358, 1468
PpsI	GAGTC	3 cut(s)	680, 1358, 1468
PpuMI	RGGWCCY	1 cut(s)	194
Psp5II	RGGWCCY	1 cut(s)	194
Psp6I	CCWGG	9 cut(s)	51, 278, 406, 577, 784, 942, 1264, 1549, 1742
PspGI	CCWGG	9 cut(s)	51, 278, 406, 577, 784, 942, 1264, 1549, 1742
PspN4I	GGNNCC	8 cut(s)	196, 340, 586, 636, 780, 790, 1647, 1741
PspPI	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
PspPPI	RGGWCCY	1 cut(s)	194
PspXI	VCTCGAGB	1 cut(s)	1515
PstI	CTGCAG	3 cut(s)	193, 496, 742
PsuI	RGATCY	2 cut(s)	1558, 1756
PvuI	CGATCG	1 cut(s)	351
PvuII	CAGCTG	1 cut(s)	1036
RgaI	GCGATCGC	1 cut(s)	351
RruI	TCGCGA	1 cut(s)	347
RseI	CAYNNNNRTG	3 cut(s)	872, 1046, 1403
SalI	GTCGAC	1 cut(s)	253
SapI	GCTCTTC	1 cut(s)	1412
SaqAI	TTAA	4 cut(s)	152, 363, 393, 480
Sau3AI	GATC	7 cut(s)	348, 531, 857, 1372, 1486, 1558, 1756
Sau96I	GGNCC	6 cut(s)	194, 298, 584, 779, 789, 1739
SchI	GAGTC	3 cut(s)	681, 1358, 1468
SduI	GDGCHC	3 cut(s)	245, 617, 639
SfaAI	GCGATCGC	1 cut(s)	351
SfaNI	GCATC	3 cut(s)	955, 1182, 1782
SfcI	CTRYAG	3 cut(s)	189, 492, 738
Sfr274I	CTCGAG	1 cut(s)	1515
SgfI	GCGATCGC	1 cut(s)	351
SinI	GGWCC	4 cut(s)	194, 298, 789, 1739
SlaI	CTCGAG	1 cut(s)	1515
SmiMI	CAYNNNNRTG	3 cut(s)	872, 1046, 1403
SmlI	CTYRAG	1 cut(s)	1515
SmoI	CTYRAG	1 cut(s)	1515
SspMI	CTAG	4 cut(s)	897, 1593, 1610, 2047
StyI	CCWWGG	1 cut(s)	810
TaaI	ACNGT	2 cut(s)	343, 1070
TaiI	ACGT	2 cut(s)	453, 576
TaqI	TCGA	8 cut(s)	254, 260, 675, 1143, 1359, 1367, 1375, 1516
TauI	GCSGC	4 cut(s)	251, 784, 1002, 1091
TfiI	GAWTC	8 cut(s)	397, 993, 1030, 1115, 1140, 1269, 1510, 1948
Tru1I	TTAA	4 cut(s)	152, 363, 393, 480
Tru9I	TTAA	4 cut(s)	152, 363, 393, 480
TscAI	CASTG	8 cut(s)	171, 501, 807, 1048, 1075, 1476, 1497, 1851
TseFI	GTSAC	5 cut(s)	3, 107, 649, 1687, 1711
TseI	GCWGC	8 cut(s)	188, 424, 461, 1036, 1209, 1307, 1622, 1667
Tsp45I	GTSAC	5 cut(s)	3, 107, 649, 1687, 1711
TspDTI	ATGAA	9 cut(s)	693, 856, 940, 1313, 1317, 1364, 1458, 1534, 1977
TspGWI	ACGGA	1 cut(s)	927
TspRI	CASTG	8 cut(s)	171, 501, 807, 1048, 1075, 1476, 1497, 1851
VpaK11BI	GGWCC	4 cut(s)	194, 298, 789, 1739
XapI	RAATTY	8 cut(s)	154, 514, 710, 753, 931, 1107, 1964, 1985
XceI	RCATGY	1 cut(s)	1892
XcmI	CCANNNNNNNNNTGG	1 cut(s)	628
XhoI	CTCGAG	1 cut(s)	1515
XmiI	GTMKAC	1 cut(s)	254
XspI	CTAG	4 cut(s)	897, 1593, 1610, 2047

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.