FvH4_6g50920

monodehydroascorbate reductase, cytoplasmic isoform 2

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
37816494 .. 37821860
5367 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g50920.t2

Sequence Viewer

Length: 1437 bp
ATGGGGAGGGCATTTGTGTATGTGATACTTGGGGGAGGGGTGGCAGCTGGTTATGCAGCTCTTGAATTCACCAGGAGAGGAATCTCCCATGGTGAGCTCTGCATCATTTCCGAGGAGCCTGTTCCTCCTTATGAGAGGCCTGCTTTAAGCAAAGGTTTCTTACTTCCAGAAGCCCCTTCACGCCTTCCATCATTTCACACATGTGTTGGTGCCAATGAGGAAAAATTGACTCCAAAATGGTACAAGGAACATGGGATTGAATTAGTTCTTGGAACTCGAGTTAAGTCTGTTGACGTCAGACGCAAGACAATATTGACAGGATCTGGAGAGACTATAACTTACAAGATTCTCGTTATTGCAACAGGTGCTCGGGCACTCAAGCTGGAGGAGTTTGGAGTCAAAGGATCAGATTCTGAAAATGTGTGCTATTTACGAAATTTGGCTGATGCAAATAGACTAGTCAACTTGGTGCAATCTTGCCCTGGTGGGAATGCTGTTGTCATTGGTGGTGGTTACATTGGTATGGAGTGCGCTGCATCGTTGGTGATCAATAGAGTGAATGTGACAATGGTTTTTCCTGAAGAACACTGCATGGCTCGATTATTCACACCCAAGATTGCAAGTTATTATGAAGAGTTTTACAAGTCCAAGGGAGTGAATTTTGTTAAAGGAACCATTTTGTCCTCATTTGATATTGACCCTAATGGGAAGGTCACAGCCGTTAATCTCAGAGATGGAAGTTGTCTACCAGCAGACATGGTTGTGGTGGGAATAGGAATCCGTCCAAACACAAGCCTTTTTGAAGGTCAGCTGACGCTGGAGAAGGGCGGGATCAAAGTGAATGGAAAAATGCAGTCGAGCAATAGTTCAGTCTATGCAGTTGGAGATGTGGCAGCATTTCCCGTCAAACTATTTGGTGACTCCCGTAGGCTCGAACATGTTGACTCTGCAAGAAAAACTGCCAGACATGCTGTTGCTGCCATTATGGAACCAAGCAAAGCTGTTGAATTTGACTATCTACCGTTCTTTTACTCCAGAGTCTTCACCTTGTCTTGGCAGTTTTATGGGGACAATATAGGAGATGTGGTTCATTTTGGAGATTTCTCAGGAGGCACATTCGGGGCATATTGGGTCAGCAATGGTCAACTTGTCGGGTCTTTTCTTGAAGGGGGAACCAAAGAAGAGTATGAAGCAATAGCCAAGGCCACCAGGCTGAAGCCAGCAGTTGAAGATGTGGCCGAGTTGGAAAGGCAAGGTTTGGTTTTCGCATTGACTGCTAGTCAGAAACCACCACCGTCTCCTCCTCGTGAAGTTGCTGGTTCTAGCATCGTTGTGGACAGACCGATATACGCTTTCCATGCAACTGCCGGTGTTCTTCTGGCTGCATCAATAGCTGCGTTTGCATATTGGTATGGAAGAAAGCGTAGAAGATGGTGA

Protein Analysis

479

Amino Acids

51.94

Weight (kDa)

8.65

Isoelectric Point (pI)

43.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 16 - 293 3e-49 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3 PF13738 57 - 264 3.9e-06 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 138 - 218 3.8e-13 Pyridine nucleotide-disulphide oxidoreductase
MDHAR3-like_C PF21791 313 - 396 7.4e-39 Monodehydroascorbate reductase 3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011705)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 297
AccB1I GGYRCC 1 cut(s) 209
AccI GTMKAC 1 cut(s) 745
AciI CCGC 1 cut(s) 828
AclWI GGATC 3 cut(s) 328, 412, 839
AcoI YGGCCR 1 cut(s) 1236
AcsI RAATTY 4 cut(s) 65, 436, 658, 1007
AcuI CTGAAG 2 cut(s) 600, 1235
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 1 cut(s) 242
AfiI CCNNNNNNNGG 1 cut(s) 1053
AflIII ACRYGT 2 cut(s) 200, 937
AgsI TTSAA 6 cut(s) 65, 260, 803, 1007, 1166, 1229
AhdI GACNNNNNGTC 1 cut(s) 1278
AhlI ACTAGT 1 cut(s) 457
AjnI CCWGG 3 cut(s) 71, 481, 1208
AjuI GAANNNNNNNTTGG 2 cut(s) 252, 284
AleI CACNNNNGTG 1 cut(s) 201
AloI GAACNNNNNNTCC 2 cut(s) 1071, 1103
AluBI AGCT 7 cut(s) 47, 59, 97, 382, 811, 1001, 1394
AluI AGCT 7 cut(s) 47, 59, 97, 382, 811, 1001, 1394
Alw21I GWGCWC 2 cut(s) 99, 370
Alw26I GTCTC 2 cut(s) 323, 1302
AlwI GGATC 3 cut(s) 328, 412, 839
AlwNI CAGNNNCTG 2 cut(s) 323, 413
Ama87I CYCGRG 2 cut(s) 276, 369
AoxI GGCC 3 cut(s) 137, 1203, 1236
ApeKI GCWGC 7 cut(s) 44, 56, 533, 893, 977, 1382, 1394
ApoI RAATTY 4 cut(s) 65, 436, 658, 1007
Asp700I GAANNNNTTC 1 cut(s) 264
AspLEI GCGC 1 cut(s) 533
AsuHPI GGTGA 5 cut(s) 61, 104, 556, 929, 1036
AvaI CYCGRG 2 cut(s) 276, 369
BaeGI GKGCMC 1 cut(s) 376
BanI GGYRCC 1 cut(s) 209
BanII GRGCYC 1 cut(s) 99
BauI CACGAG 1 cut(s) 1305
BbsI GAAGAC 1 cut(s) 1033
Bbv12I GWGCWC 2 cut(s) 99, 370
BbvI GCAGC 7 cut(s) 56, 68, 520, 905, 964, 1369, 1381
BccI CCATC 3 cut(s) 196, 728, 1425
BceAI ACGGC 1 cut(s) 704
BciT130I CCWGG 3 cut(s) 73, 483, 1210
BclI TGATCA 1 cut(s) 546
BcoDI GTCTC 2 cut(s) 323, 1302
BcuI ACTAGT 1 cut(s) 457
BfaI CTAG 3 cut(s) 458, 1278, 1323
BisI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1383, 1395
BlsI GCNGC 7 cut(s) 46, 58, 535, 895, 979, 1384, 1396
Bme1390I CCNGG 3 cut(s) 73, 483, 1210
BmeRI GACNNNNNGTC 1 cut(s) 1278
BmeT110I CYCGRG 2 cut(s) 276, 369
BmiI GGNNCC 5 cut(s) 117, 211, 673, 990, 1174
BmrFI CCNGG 3 cut(s) 73, 483, 1210
BmsI GCATC 5 cut(s) 111, 436, 545, 1335, 1394
BpiI GAAGAC 1 cut(s) 1033
BpmI CTGGAG 4 cut(s) 345, 404, 839, 1018
BpuEI CTTGAG 1 cut(s) 362
BsaHI GRCGYC 1 cut(s) 294
BsaJI CCNNGG 5 cut(s) 88, 111, 481, 648, 1200
BsaXI ACNNNNNCTCC 2 cut(s) 1071, 1101
Bsc4I CCNNNNNNNGG 1 cut(s) 1053
Bse118I RCCGGY 1 cut(s) 1367
Bse3DI GCAATG 1 cut(s) 1144
BseBI CCWGG 3 cut(s) 73, 483, 1210
BseDI CCNNGG 5 cut(s) 88, 111, 481, 648, 1200
BseLI CCNNNNNNNGG 1 cut(s) 1053
BseMI GCAATG 1 cut(s) 1144
BseMII CTCAG 2 cut(s) 742, 1119
BseRI GAGGAG 4 cut(s) 128, 401, 1290, 1293
BseSI GKGCMC 1 cut(s) 376
BseXI GCAGC 7 cut(s) 56, 68, 520, 905, 964, 1369, 1381
BshFI GGCC 3 cut(s) 139, 1205, 1238
BshNI GGYRCC 1 cut(s) 209
BsiHKAI GWGCWC 2 cut(s) 99, 370
BsiHKCI CYCGRG 2 cut(s) 276, 369
BsiSI CCGG 1 cut(s) 1368
BslFI GGGAC 1 cut(s) 1082
BslI CCNNNNNNNGG 1 cut(s) 1053
BsmAI GTCTC 2 cut(s) 323, 1302
BsmBI CGTCTC 1 cut(s) 1302
BsmFI GGGAC 1 cut(s) 1082
BsmI GAATGC 1 cut(s) 496
BsnI GGCC 3 cut(s) 139, 1205, 1238
BsoBI CYCGRG 2 cut(s) 276, 369
Bsp1286I GDGCHC 3 cut(s) 99, 370, 376
Bsp143I GATC 4 cut(s) 320, 404, 546, 831
Bsp19I CCATGG 1 cut(s) 88
BspACI CCGC 1 cut(s) 828
BspANI GGCC 3 cut(s) 139, 1205, 1238
BspCNI CTCAG 2 cut(s) 741, 1118
BspLI GGNNCC 5 cut(s) 117, 211, 673, 990, 1174
BspPI GGATC 3 cut(s) 328, 412, 839
BspT107I GGYRCC 1 cut(s) 209
BsrDI GCAATG 1 cut(s) 1144
BsrFI RCCGGY 1 cut(s) 1367
BssAI RCCGGY 1 cut(s) 1367
BssECI CCNNGG 5 cut(s) 88, 111, 481, 648, 1200
BssMI GATC 4 cut(s) 320, 404, 546, 831
BssNI GRCGYC 1 cut(s) 294
BssSI CACGAG 1 cut(s) 1305
BssT1I CCWWGG 3 cut(s) 88, 648, 1200
Bst2BI CACGAG 1 cut(s) 1305
Bst2UI CCWGG 3 cut(s) 73, 483, 1210
Bst4CI ACNGT 2 cut(s) 1023, 1296
Bst6I CTCTTC 2 cut(s) 627, 1176
BstACI GRCGYC 1 cut(s) 294
BstAPI GCANNNNNTGC 2 cut(s) 365, 1274
BstC8I GCNNGC 2 cut(s) 141, 1221
BstDEI CTNAG 2 cut(s) 728, 1105
BstDSI CCRYGG 1 cut(s) 88
BstHHI GCGC 1 cut(s) 533
BstKTI GATC 4 cut(s) 323, 407, 549, 834
BstMAI GTCTC 2 cut(s) 323, 1302
BstMBI GATC 4 cut(s) 320, 404, 546, 831
BstMWI GCNNNNNNNGC 8 cut(s) 53, 365, 968, 977, 1274, 1358, 1391, 1400
BstNI CCWGG 3 cut(s) 73, 483, 1210
BstNSI RCATGY 3 cut(s) 204, 941, 971
BstSCI CCNGG 3 cut(s) 71, 481, 1208
BstSLI GKGCMC 1 cut(s) 376
BstV1I GCAGC 7 cut(s) 56, 68, 520, 905, 964, 1369, 1381
BstV2I GAAGAC 1 cut(s) 1033
BstX2I RGATCY 1 cut(s) 320
BstYI RGATCY 1 cut(s) 320
BsuRI GGCC 3 cut(s) 139, 1205, 1238
BtgI CCRYGG 1 cut(s) 88
BtsI GCAGTG 1 cut(s) 586
BtsIMutI CAGTG 1 cut(s) 586
Cac8I GCNNGC 2 cut(s) 141, 1221
CaiI CAGNNNCTG 2 cut(s) 323, 413
CfoI GCGC 1 cut(s) 533
Cfr10I RCCGGY 1 cut(s) 1367
CseI GACGC 2 cut(s) 309, 823
Csp6I GTAC 1 cut(s) 241
CviAII CATG 8 cut(s) 89, 201, 251, 592, 757, 938, 968, 1358
CviQI GTAC 1 cut(s) 241
DdeI CTNAG 2 cut(s) 728, 1105
DpnI GATC 4 cut(s) 322, 406, 548, 833
DpnII GATC 4 cut(s) 320, 404, 546, 831
DriI GACNNNNNGTC 1 cut(s) 1278
EaeI YGGCCR 1 cut(s) 1236
Eam1104I CTCTTC 2 cut(s) 627, 1176
Eam1105I GACNNNNNGTC 1 cut(s) 1278
EarI CTCTTC 2 cut(s) 627, 1176
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 3 cut(s) 88, 648, 1200
Eco147I AGGCCT 1 cut(s) 139
Eco24I GRGCYC 1 cut(s) 99
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 2 cut(s) 600, 1235
Eco88I CYCGRG 2 cut(s) 276, 369
EcoICRI GAGCTC 1 cut(s) 97
EcoRI GAATTC 1 cut(s) 65
EcoRII CCWGG 3 cut(s) 71, 481, 1208
EcoT14I CCWWGG 3 cut(s) 88, 648, 1200
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 3 cut(s) 88, 648, 1200
Esp3I CGTCTC 1 cut(s) 1302
FaeI CATG 8 cut(s) 92, 204, 254, 595, 760, 941, 971, 1361
FaqI GGGAC 1 cut(s) 1082
FatI CATG 8 cut(s) 88, 200, 250, 591, 756, 937, 967, 1357
FauI CCCGC 1 cut(s) 821
FbaI TGATCA 1 cut(s) 546
FblI GTMKAC 1 cut(s) 745
Fnu4HI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1383, 1395
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1383, 1395
FspBI CTAG 3 cut(s) 458, 1278, 1323
GlaI GCGC 1 cut(s) 532
GluI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1383, 1395
GsuI CTGGAG 4 cut(s) 345, 404, 839, 1018
HaeIII GGCC 3 cut(s) 139, 1205, 1238
HapII CCGG 1 cut(s) 1368
HgaI GACGC 2 cut(s) 309, 823
HhaI GCGC 1 cut(s) 533
Hin1I GRCGYC 1 cut(s) 294
Hin1II CATG 8 cut(s) 92, 204, 254, 595, 760, 941, 971, 1361
Hin6I GCGC 1 cut(s) 531
HinP1I GCGC 1 cut(s) 531
HincII GTYRAC 4 cut(s) 292, 463, 943, 1145
HindII GTYRAC 4 cut(s) 292, 463, 943, 1145
HinfI GANTC 9 cut(s) 81, 229, 346, 396, 410, 777, 920, 944, 1038
HpaII CCGG 1 cut(s) 1368
HphI GGTGA 5 cut(s) 61, 104, 556, 929, 1036
Hpy166II GTNNAC 6 cut(s) 292, 463, 746, 943, 1145, 1336
Hpy188I TCNGA 6 cut(s) 112, 299, 409, 415, 731, 1284
Hpy188III TCNNGA 8 cut(s) 62, 167, 324, 578, 1035, 1107, 1163, 1307
Hpy8I GTNNAC 6 cut(s) 292, 463, 746, 943, 1145, 1336
HpyAV CCTTC 6 cut(s) 186, 194, 703, 797, 817, 1160
HpyCH4III ACNGT 2 cut(s) 1023, 1296
HpyCH4IV ACGT 1 cut(s) 294
HpyF10VI GCNNNNNNNGC 8 cut(s) 53, 365, 968, 977, 1274, 1358, 1391, 1400
HpyF3I CTNAG 2 cut(s) 728, 1105
HpySE526I ACGT 1 cut(s) 294
Hsp92I GRCGYC 1 cut(s) 294
Hsp92II CATG 8 cut(s) 92, 204, 254, 595, 760, 941, 971, 1361
HspAI GCGC 1 cut(s) 531
Ksp22I TGATCA 1 cut(s) 546
Kzo9I GATC 4 cut(s) 320, 404, 546, 831
LmnI GCTCC 1 cut(s) 115
Lsp1109I GCAGC 7 cut(s) 56, 68, 520, 905, 964, 1369, 1381
LweI GCATC 5 cut(s) 111, 436, 545, 1335, 1394
MaeI CTAG 3 cut(s) 458, 1278, 1323
MaeII ACGT 1 cut(s) 294
MaeIII GTNAC 4 cut(s) 512, 562, 712, 917
MalI GATC 4 cut(s) 322, 406, 548, 833
MboI GATC 4 cut(s) 320, 404, 546, 831
MboII GAAGA 7 cut(s) 593, 644, 1033, 1193, 1241, 1367, 1428
MflI RGATCY 1 cut(s) 320
MhlI GDGCHC 3 cut(s) 99, 370, 376
MluCI AATT 6 cut(s) 65, 224, 260, 436, 658, 1007
MlyI GAGTC 5 cut(s) 223, 405, 914, 938, 1047
MmeI TCCRAC 2 cut(s) 862, 1224
MroXI GAANNNNTTC 1 cut(s) 264
MseI TTAA 4 cut(s) 146, 282, 666, 723
MslI CAYNNNNRTG 4 cut(s) 201, 521, 761, 1331
MspA1I CMGCKG 2 cut(s) 47, 811
MspI CCGG 1 cut(s) 1368
MspR9I CCNGG 3 cut(s) 73, 483, 1210
Mva1269I GAATGC 1 cut(s) 496
MvaI CCWGG 3 cut(s) 73, 483, 1210
MwoI GCNNNNNNNGC 8 cut(s) 53, 365, 968, 977, 1274, 1358, 1391, 1400
NcoI CCATGG 1 cut(s) 88
NdeII GATC 4 cut(s) 320, 404, 546, 831
NlaIII CATG 8 cut(s) 92, 204, 254, 595, 760, 941, 971, 1361
NlaIV GGNNCC 5 cut(s) 117, 211, 673, 990, 1174
NmeAIII GCCGAG 1 cut(s) 1264
NmuCI GTSAC 3 cut(s) 562, 712, 917
NspI RCATGY 3 cut(s) 204, 941, 971
OliI CACNNNNGTG 1 cut(s) 201
PaeR7I CTCGAG 1 cut(s) 276
PceI AGGCCT 1 cut(s) 139
PciI ACATGT 2 cut(s) 200, 937
PctI GAATGC 1 cut(s) 496
PdmI GAANNNNTTC 1 cut(s) 264
PfeI GAWTC 4 cut(s) 81, 346, 410, 777
PkrI GCNGC 7 cut(s) 46, 58, 535, 895, 979, 1384, 1396
PleI GAGTC 5 cut(s) 223, 404, 914, 938, 1046
PpsI GAGTC 5 cut(s) 223, 404, 914, 938, 1046
PscI ACATGT 2 cut(s) 200, 937
Psp124BI GAGCTC 1 cut(s) 99
Psp6I CCWGG 3 cut(s) 71, 481, 1208
PspGI CCWGG 3 cut(s) 71, 481, 1208
PspN4I GGNNCC 5 cut(s) 117, 211, 673, 990, 1174
PspXI VCTCGAGB 1 cut(s) 276
PstNI CAGNNNCTG 2 cut(s) 323, 413
PsuI RGATCY 1 cut(s) 320
PvuII CAGCTG 2 cut(s) 47, 811
RsaI GTAC 1 cut(s) 242
RsaNI GTAC 1 cut(s) 241
RseI CAYNNNNRTG 4 cut(s) 201, 521, 761, 1331
SacI GAGCTC 1 cut(s) 99
SaqAI TTAA 4 cut(s) 146, 282, 666, 723
SatI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1383, 1395
Sau3AI GATC 4 cut(s) 320, 404, 546, 831
SchI GAGTC 5 cut(s) 223, 405, 914, 938, 1047
ScrFI CCNGG 3 cut(s) 73, 483, 1210
SduI GDGCHC 3 cut(s) 99, 370, 376
SfaNI GCATC 5 cut(s) 111, 436, 545, 1335, 1394
Sfr274I CTCGAG 1 cut(s) 276
SlaI CTCGAG 1 cut(s) 276
SmiMI CAYNNNNRTG 4 cut(s) 201, 521, 761, 1331
SmlI CTYRAG 2 cut(s) 276, 377
SmoI CTYRAG 2 cut(s) 276, 377
SpeI ACTAGT 1 cut(s) 457
Sse9I AATT 6 cut(s) 65, 224, 260, 436, 658, 1007
SseBI AGGCCT 1 cut(s) 139
SsiI CCGC 1 cut(s) 828
SspI AATATT 1 cut(s) 312
SspMI CTAG 3 cut(s) 458, 1278, 1323
SstI GAGCTC 1 cut(s) 99
StuI AGGCCT 1 cut(s) 139
StyD4I CCNGG 3 cut(s) 71, 481, 1208
StyI CCWWGG 3 cut(s) 88, 648, 1200
TaaI ACNGT 2 cut(s) 1023, 1296
TaiI ACGT 1 cut(s) 297
TaqI TCGA 4 cut(s) 277, 598, 857, 933
TaqII GACCGA 1 cut(s) 1357
TasI AATT 6 cut(s) 65, 224, 260, 436, 658, 1007
TfiI GAWTC 4 cut(s) 81, 346, 410, 777
Tru1I TTAA 4 cut(s) 146, 282, 666, 723
Tru9I TTAA 4 cut(s) 146, 282, 666, 723
TscAI CASTG 1 cut(s) 593
TseFI GTSAC 3 cut(s) 562, 712, 917
TseI GCWGC 7 cut(s) 44, 56, 533, 893, 977, 1382, 1394
Tsp45I GTSAC 3 cut(s) 562, 712, 917
TspDTI ATGAA 3 cut(s) 645, 1079, 1203
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 1 cut(s) 593
XapI RAATTY 4 cut(s) 65, 436, 658, 1007
XceI RCATGY 3 cut(s) 204, 941, 971
XhoI CTCGAG 1 cut(s) 276
XmiI GTMKAC 1 cut(s) 745
XmnI GAANNNNTTC 1 cut(s) 264
XspI CTAG 3 cut(s) 458, 1278, 1323
ZraI GACGTC 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.