Rw2G052460

monodehydroascorbate reductase, cytoplasmic isoform 2

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
80397151 .. 80400896
3746 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G052460.1

Sequence Viewer

Length: 1443 bp
ATGGGGAGGGCATTTGTGTATGTGATTCTTGGAGGAGGGGTGGCAGCTGGTTATGCAGCACTTGAATTCACCAAGAGAGGCATCTCCCATGGTGAACTCTGCATCATTTCCGAGGAGCCAGTTGCCCCTTACGAGAGACCTGCTTTAAGCAAAGGTTTTCTACTTCCAGAAGCCCCTGCATGCCTTCCATCATTCCACACATGTGTTGGTGCTAATGAGGAAAGGTTAACTCCAAAATGGTATAAGGAACATGGGATTGAATTAGTTCTTGGAACTCGAGTCAAGTCTGTTGATGTTAGACGCAAGACAATATTGACAGGATCTGGAGAGACTATAACTTACAGGACTCTCATTATTGCAACAGGTGCTCGGGCACTGAAGCTGGAGGAGTTTGGAGTCAAAGGATCAGATTCTGAAAACGTGTGCTATTTACGAAATTTGGTTGATGCCAATAGACTCGTCGACTTGGTGCAATCTTGCCCTGGCGGAAATGCTGTTGTCATTGGTGGTGGCTACATTGGAATGGAGTGTGCTGCATCGTTGGTGATCAATAGAATGAATGTAACAATGGTTTTTCCAGAAGAACATTGCATGGCTCGATTATTCACACCCAAGATTGCAAGTTATTATGAAGAGTTTTACAAGTCCAAAGGAGTGAATTTTGTTAAAGGAACCATTTTGTCCTCATTTGACATTGACCCGGATGGGAAGGTCACAGCCGTTAATCTTAGAGATGGAAGTAGTCTACCTGCAGATATGGTTGTGGTGGGAATAGGAATCCGTCCAAACACAAGCCTATTTGAAGGTCAGCTGACGCTGGAGAAAGGTGGGATCAAAGTGAATGGAAAAATGCAGTCGAGCAATGGCTCAGTCTATGCAGTTGGAGATGTTGCTGCATTTCCAGTCAAACTATTTGGTGACTCCCGTAGGCTCGAACACGTTGACTCAGCAAGAAAAACTGCCAGACATGCTGTTGCTGCAATTATGGAACCAGACAAAGCGGTTGAATTTGACTATCTACCATTCTTTTACTCCAGAGTCTTCACCTTGTCTTGGCAGTTTTATGGGGACAATATAGGAGATGTAGTCCATTATGGAGATTTCTCAGGAGGCACATTCGGGGCTTATTGGGTCAGCAATGGTCATCTTGTTGGGTCTTTTCTTGAAGGAGGAACCAAAGAAGAGTATGAAGCTATAGCCAAGGCCACCAGGCTGAAGCCAGCAATTGAAGATGTGGCCGAGTTGGAAAGGCAAGGTTTGGGTTTTGCATTGACCGCTAGTCAGAAACCACCACCATCACCATCACCACTTCGTGAAGTTGCTGGTCCTGGCATCATTGTGGAGAGACCAATATATGCTTTTCATGCAACTGCCGGCGTTCTTCTGGCTGCATCAATAGCTGCATTTGCATATTGGTATGGAAGAAAGCGCCGAAGATGGTGA

Protein Analysis

480

Amino Acids

52.12

Weight (kDa)

7.6

Isoelectric Point (pI)

43.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 7 - 320 2e-56 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3 PF13738 83 - 288 8e-07 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 165 - 245 2.1e-13 Pyridine nucleotide-disulphide oxidoreductase
MDHAR3-like_C PF21791 340 - 423 1.3e-38 Monodehydroascorbate reductase 3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011705)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 148, 757
AccI GTMKAC 2 cut(s) 462, 745
AciI CCGC 3 cut(s) 486, 1001, 1275
AclWI GGATC 3 cut(s) 328, 412, 839
AcoI YGGCCR 1 cut(s) 1236
AcsI RAATTY 4 cut(s) 65, 436, 658, 1007
AcuI CTGAAG 2 cut(s) 398, 1235
AdeI CACNNNGTG 1 cut(s) 1313
AfiI CCNNNNNNNGG 1 cut(s) 1053
AflIII ACRYGT 3 cut(s) 200, 420, 937
AgsI TTSAA 6 cut(s) 65, 260, 803, 1007, 1166, 1229
AhdI GACNNNNNGTC 1 cut(s) 1278
AjnI CCWGG 3 cut(s) 481, 1208, 1327
AjuI GAANNNNNNNTTGG 2 cut(s) 252, 284
AleI CACNNNNGTG 1 cut(s) 201
AluBI AGCT 5 cut(s) 47, 382, 811, 1193, 1400
AluI AGCT 5 cut(s) 47, 382, 811, 1193, 1400
Alw21I GWGCWC 1 cut(s) 370
Alw26I GTCTC 3 cut(s) 130, 323, 1339
AlwI GGATC 3 cut(s) 328, 412, 839
AlwNI CAGNNNCTG 2 cut(s) 323, 413
Ama87I CYCGRG 2 cut(s) 276, 369
AoxI GGCC 2 cut(s) 1203, 1236
ApeKI GCWGC 7 cut(s) 44, 56, 533, 893, 977, 1388, 1400
ApoI RAATTY 4 cut(s) 65, 436, 658, 1007
Asp700I GAANNNNTTC 1 cut(s) 264
AspLEI GCGC 1 cut(s) 1431
AspS9I GGNCC 1 cut(s) 1325
AsuC2I CCSGG 1 cut(s) 701
AsuHPI GGTGA 7 cut(s) 61, 104, 556, 929, 1036, 1290, 1296
AvaI CYCGRG 2 cut(s) 276, 369
AvaII GGWCC 1 cut(s) 1325
BaeGI GKGCMC 1 cut(s) 376
BbsI GAAGAC 1 cut(s) 1033
Bbv12I GWGCWC 1 cut(s) 370
BbvI GCAGC 7 cut(s) 56, 68, 520, 880, 964, 1375, 1387
BccI CCATC 6 cut(s) 196, 698, 728, 1303, 1309, 1431
BceAI ACGGC 1 cut(s) 704
BcgI CGANNNNNNTGC 2 cut(s) 122, 156
BciT130I CCWGG 3 cut(s) 483, 1210, 1329
BclI TGATCA 1 cut(s) 546
BcnI CCSGG 1 cut(s) 701
BcoDI GTCTC 3 cut(s) 130, 323, 1339
BfaI CTAG 1 cut(s) 1278
BfmI CTRYAG 2 cut(s) 750, 1194
BfoI RGCGCY 1 cut(s) 1432
BfuAI ACCTGC 2 cut(s) 148, 757
BisI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1389, 1401
BlsI GCNGC 7 cut(s) 46, 58, 535, 895, 979, 1390, 1402
Bme1390I CCNGG 4 cut(s) 483, 701, 1210, 1329
Bme18I GGWCC 1 cut(s) 1325
BmeRI GACNNNNNGTC 1 cut(s) 1278
BmeT110I CYCGRG 2 cut(s) 276, 369
BmgT120I GGNCC 1 cut(s) 1325
BmiI GGNNCC 4 cut(s) 117, 673, 990, 1174
BmrFI CCNGG 4 cut(s) 483, 701, 1210, 1329
BmsI GCATC 6 cut(s) 90, 111, 436, 545, 1341, 1400
BpiI GAAGAC 1 cut(s) 1033
BpmI CTGGAG 4 cut(s) 345, 404, 839, 1018
BpuMI CCSGG 1 cut(s) 701
BsaI GGTCTC 2 cut(s) 130, 1339
BsaJI CCNNGG 4 cut(s) 88, 111, 481, 1200
BsaXI ACNNNNNCTCC 4 cut(s) 24, 54, 1071, 1101
Bsc4I CCNNNNNNNGG 1 cut(s) 1053
Bse118I RCCGGY 1 cut(s) 1373
Bse1I ACTGG 2 cut(s) 119, 902
Bse3DI GCAATG 3 cut(s) 586, 868, 1144
BseBI CCWGG 3 cut(s) 483, 1210, 1329
BseDI CCNNGG 4 cut(s) 88, 111, 481, 1200
BseGI GGATG 1 cut(s) 709
BseLI CCNNNNNNNGG 1 cut(s) 1053
BseMI GCAATG 3 cut(s) 586, 868, 1144
BseMII CTCAG 3 cut(s) 882, 960, 1119
BseNI ACTGG 2 cut(s) 119, 902
BseRI GAGGAG 3 cut(s) 48, 128, 401
BseSI GKGCMC 1 cut(s) 376
BseXI GCAGC 7 cut(s) 56, 68, 520, 880, 964, 1375, 1387
BshFI GGCC 2 cut(s) 1205, 1238
BsiHKAI GWGCWC 1 cut(s) 370
BsiHKCI CYCGRG 2 cut(s) 276, 369
BsiSI CCGG 2 cut(s) 701, 1374
BslFI GGGAC 1 cut(s) 1082
BslI CCNNNNNNNGG 1 cut(s) 1053
BsmAI GTCTC 3 cut(s) 130, 323, 1339
BsmFI GGGAC 1 cut(s) 1082
BsnI GGCC 2 cut(s) 1205, 1238
Bso31I GGTCTC 2 cut(s) 130, 1339
BsoBI CYCGRG 2 cut(s) 276, 369
Bsp1286I GDGCHC 2 cut(s) 370, 376
Bsp143I GATC 4 cut(s) 320, 404, 546, 831
Bsp19I CCATGG 1 cut(s) 88
BspACI CCGC 3 cut(s) 486, 1001, 1275
BspANI GGCC 2 cut(s) 1205, 1238
BspCNI CTCAG 3 cut(s) 881, 959, 1118
BspLI GGNNCC 4 cut(s) 117, 673, 990, 1174
BspMAI CTGCAG 1 cut(s) 754
BspMI ACCTGC 2 cut(s) 148, 757
BspPI GGATC 3 cut(s) 328, 412, 839
BspTNI GGTCTC 2 cut(s) 130, 1339
BsrDI GCAATG 3 cut(s) 586, 868, 1144
BsrFI RCCGGY 1 cut(s) 1373
BsrI ACTGG 2 cut(s) 119, 902
BssAI RCCGGY 1 cut(s) 1373
BssECI CCNNGG 4 cut(s) 88, 111, 481, 1200
BssMI GATC 4 cut(s) 320, 404, 546, 831
BssT1I CCWWGG 2 cut(s) 88, 1200
Bst2UI CCWGG 3 cut(s) 483, 1210, 1329
Bst6I CTCTTC 2 cut(s) 627, 1176
BstAPI GCANNNNNTGC 1 cut(s) 365
BstC8I GCNNGC 3 cut(s) 181, 1221, 1375
BstDEI CTNAG 4 cut(s) 728, 868, 946, 1105
BstDSI CCRYGG 1 cut(s) 88
BstF5I GGATG 1 cut(s) 709
BstH2I RGCGCY 1 cut(s) 1432
BstHHI GCGC 1 cut(s) 1431
BstKTI GATC 4 cut(s) 323, 407, 549, 834
BstMAI GTCTC 3 cut(s) 130, 323, 1339
BstMBI GATC 4 cut(s) 320, 404, 546, 831
BstMWI GCNNNNNNNGC 8 cut(s) 53, 365, 968, 977, 1274, 1364, 1397, 1406
BstNI CCWGG 3 cut(s) 483, 1210, 1329
BstNSI RCATGY 3 cut(s) 183, 204, 971
BstSCI CCNGG 4 cut(s) 481, 699, 1208, 1327
BstSFI CTRYAG 2 cut(s) 750, 1194
BstSLI GKGCMC 1 cut(s) 376
BstV1I GCAGC 7 cut(s) 56, 68, 520, 880, 964, 1375, 1387
BstV2I GAAGAC 1 cut(s) 1033
BstX2I RGATCY 1 cut(s) 320
BstYI RGATCY 1 cut(s) 320
BsuRI GGCC 2 cut(s) 1205, 1238
BtgI CCRYGG 1 cut(s) 88
BtsCI GGATG 1 cut(s) 709
BtsIMutI CAGTG 1 cut(s) 374
BveI ACCTGC 2 cut(s) 148, 757
Cac8I GCNNGC 3 cut(s) 181, 1221, 1375
CaiI CAGNNNCTG 2 cut(s) 323, 413
CfoI GCGC 1 cut(s) 1431
Cfr10I RCCGGY 1 cut(s) 1373
Cfr13I GGNCC 1 cut(s) 1325
CseI GACGC 2 cut(s) 309, 823
CviAII CATG 7 cut(s) 89, 180, 201, 251, 592, 968, 1364
DdeI CTNAG 4 cut(s) 728, 868, 946, 1105
DpnI GATC 4 cut(s) 322, 406, 548, 833
DpnII GATC 4 cut(s) 320, 404, 546, 831
DraIII CACNNNGTG 1 cut(s) 1313
DriI GACNNNNNGTC 1 cut(s) 1278
EaeI YGGCCR 1 cut(s) 1236
Eam1104I CTCTTC 2 cut(s) 627, 1176
Eam1105I GACNNNNNGTC 1 cut(s) 1278
EarI CTCTTC 2 cut(s) 627, 1176
EciI GGCGGA 1 cut(s) 501
Eco130I CCWWGG 2 cut(s) 88, 1200
Eco31I GGTCTC 2 cut(s) 130, 1339
Eco47I GGWCC 1 cut(s) 1325
Eco57I CTGAAG 2 cut(s) 398, 1235
Eco88I CYCGRG 2 cut(s) 276, 369
EcoRI GAATTC 1 cut(s) 65
EcoRII CCWGG 3 cut(s) 481, 1208, 1327
EcoT14I CCWWGG 2 cut(s) 88, 1200
ErhI CCWWGG 2 cut(s) 88, 1200
FaeI CATG 7 cut(s) 92, 183, 204, 254, 595, 971, 1367
FaqI GGGAC 1 cut(s) 1082
FatI CATG 7 cut(s) 88, 179, 200, 250, 591, 967, 1363
FbaI TGATCA 1 cut(s) 546
FblI GTMKAC 2 cut(s) 462, 745
Fnu4HI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1389, 1401
FokI GGATG 1 cut(s) 716
Fsp4HI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1389, 1401
FspBI CTAG 1 cut(s) 1278
GlaI GCGC 1 cut(s) 1430
GluI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1389, 1401
GsuI CTGGAG 4 cut(s) 345, 404, 839, 1018
HaeII RGCGCY 1 cut(s) 1432
HaeIII GGCC 2 cut(s) 1205, 1238
HapII CCGG 2 cut(s) 701, 1374
HgaI GACGC 2 cut(s) 309, 823
HhaI GCGC 1 cut(s) 1431
Hin1II CATG 7 cut(s) 92, 183, 204, 254, 595, 971, 1367
Hin6I GCGC 1 cut(s) 1429
HinP1I GCGC 1 cut(s) 1429
HincII GTYRAC 3 cut(s) 228, 463, 943
HindII GTYRAC 3 cut(s) 228, 463, 943
HpaI GTTAAC 1 cut(s) 228
HpaII CCGG 2 cut(s) 701, 1374
HphI GGTGA 7 cut(s) 61, 104, 556, 929, 1036, 1290, 1296
Hpy166II GTNNAC 5 cut(s) 95, 228, 463, 746, 943
Hpy188I TCNGA 4 cut(s) 112, 409, 415, 1284
Hpy188III TCNNGA 7 cut(s) 167, 324, 578, 1035, 1107, 1163, 1313
Hpy8I GTNNAC 5 cut(s) 95, 228, 463, 746, 943
Hpy99I CGWCG 1 cut(s) 464
HpyAV CCTTC 4 cut(s) 194, 703, 797, 1160
HpyCH4IV ACGT 2 cut(s) 420, 939
HpyF10VI GCNNNNNNNGC 8 cut(s) 53, 365, 968, 977, 1274, 1364, 1397, 1406
HpyF3I CTNAG 4 cut(s) 728, 868, 946, 1105
HpySE526I ACGT 2 cut(s) 420, 939
Hsp92II CATG 7 cut(s) 92, 183, 204, 254, 595, 971, 1367
HspAI GCGC 1 cut(s) 1429
KroI GCCGGC 1 cut(s) 1373
KroNI GCCGGC 1 cut(s) 1375
Ksp22I TGATCA 1 cut(s) 546
KspAI GTTAAC 1 cut(s) 228
Kzo9I GATC 4 cut(s) 320, 404, 546, 831
LmnI GCTCC 1 cut(s) 115
Lsp1109I GCAGC 7 cut(s) 56, 68, 520, 880, 964, 1375, 1387
LweI GCATC 6 cut(s) 90, 111, 436, 545, 1341, 1400
MaeI CTAG 1 cut(s) 1278
MaeII ACGT 2 cut(s) 420, 939
MaeIII GTNAC 3 cut(s) 562, 712, 917
MalI GATC 4 cut(s) 322, 406, 548, 833
MboI GATC 4 cut(s) 320, 404, 546, 831
MboII GAAGA 7 cut(s) 593, 644, 1033, 1193, 1241, 1373, 1434
MfeI CAATTG 1 cut(s) 1224
MflI RGATCY 1 cut(s) 320
MhlI GDGCHC 2 cut(s) 370, 376
MluCI AATT 7 cut(s) 65, 260, 436, 658, 981, 1007, 1224
MlyI GAGTC 7 cut(s) 288, 340, 405, 450, 914, 938, 1047
MmeI TCCRAC 2 cut(s) 862, 1224
MnlI CCTC 9 cut(s) 26, 29, 71, 106, 211, 379, 694, 1103, 1163
MroNI GCCGGC 1 cut(s) 1373
MroXI GAANNNNTTC 1 cut(s) 264
MseI TTAA 4 cut(s) 146, 227, 666, 723
MslI CAYNNNNRTG 3 cut(s) 201, 521, 1337
MspA1I CMGCKG 2 cut(s) 47, 811
MspI CCGG 2 cut(s) 701, 1374
MspR9I CCNGG 4 cut(s) 483, 701, 1210, 1329
MunI CAATTG 1 cut(s) 1224
MvaI CCWGG 3 cut(s) 483, 1210, 1329
MwoI GCNNNNNNNGC 8 cut(s) 53, 365, 968, 977, 1274, 1364, 1397, 1406
NaeI GCCGGC 1 cut(s) 1375
NciI CCSGG 1 cut(s) 701
NcoI CCATGG 1 cut(s) 88
NdeII GATC 4 cut(s) 320, 404, 546, 831
NgoMIV GCCGGC 1 cut(s) 1373
NlaIII CATG 7 cut(s) 92, 183, 204, 254, 595, 971, 1367
NlaIV GGNNCC 4 cut(s) 117, 673, 990, 1174
NmeAIII GCCGAG 1 cut(s) 1264
NmuCI GTSAC 2 cut(s) 712, 917
NspI RCATGY 3 cut(s) 183, 204, 971
OliI CACNNNNGTG 1 cut(s) 201
PaeI GCATGC 1 cut(s) 183
PaeR7I CTCGAG 1 cut(s) 276
PciI ACATGT 1 cut(s) 200
PdiI GCCGGC 1 cut(s) 1375
PdmI GAANNNNTTC 1 cut(s) 264
PfeI GAWTC 3 cut(s) 25, 410, 777
PkrI GCNGC 7 cut(s) 46, 58, 535, 895, 979, 1390, 1402
PleI GAGTC 7 cut(s) 287, 340, 404, 450, 914, 938, 1046
PpsI GAGTC 7 cut(s) 287, 340, 404, 450, 914, 938, 1046
PscI ACATGT 1 cut(s) 200
Psp6I CCWGG 3 cut(s) 481, 1208, 1327
PspGI CCWGG 3 cut(s) 481, 1208, 1327
PspN4I GGNNCC 4 cut(s) 117, 673, 990, 1174
PspPI GGNCC 1 cut(s) 1325
PspXI VCTCGAGB 1 cut(s) 276
PstI CTGCAG 1 cut(s) 754
PstNI CAGNNNCTG 2 cut(s) 323, 413
PsuI RGATCY 1 cut(s) 320
PvuII CAGCTG 2 cut(s) 47, 811
RseI CAYNNNNRTG 3 cut(s) 201, 521, 1337
SalI GTCGAC 1 cut(s) 461
SaqAI TTAA 4 cut(s) 146, 227, 666, 723
SatI GCNGC 7 cut(s) 45, 57, 534, 894, 978, 1389, 1401
Sau3AI GATC 4 cut(s) 320, 404, 546, 831
Sau96I GGNCC 1 cut(s) 1325
SchI GAGTC 7 cut(s) 288, 340, 405, 450, 914, 938, 1047
ScrFI CCNGG 4 cut(s) 483, 701, 1210, 1329
SduI GDGCHC 2 cut(s) 370, 376
SfaNI GCATC 6 cut(s) 90, 111, 436, 545, 1341, 1400
SfcI CTRYAG 2 cut(s) 750, 1194
Sfr274I CTCGAG 1 cut(s) 276
SinI GGWCC 1 cut(s) 1325
SlaI CTCGAG 1 cut(s) 276
SmiMI CAYNNNNRTG 3 cut(s) 201, 521, 1337
SmlI CTYRAG 1 cut(s) 276
SmoI CTYRAG 1 cut(s) 276
SphI GCATGC 1 cut(s) 183
Sse9I AATT 7 cut(s) 65, 260, 436, 658, 981, 1007, 1224
SsiI CCGC 3 cut(s) 486, 1001, 1275
SspI AATATT 1 cut(s) 312
SspMI CTAG 1 cut(s) 1278
StyD4I CCNGG 4 cut(s) 481, 699, 1208, 1327
StyI CCWWGG 2 cut(s) 88, 1200
TaiI ACGT 2 cut(s) 423, 942
TaqI TCGA 5 cut(s) 277, 462, 598, 857, 933
TasI AATT 7 cut(s) 65, 260, 436, 658, 981, 1007, 1224
TfiI GAWTC 3 cut(s) 25, 410, 777
Tru1I TTAA 4 cut(s) 146, 227, 666, 723
Tru9I TTAA 4 cut(s) 146, 227, 666, 723
TscAI CASTG 1 cut(s) 381
TseFI GTSAC 2 cut(s) 712, 917
TseI GCWGC 7 cut(s) 44, 56, 533, 893, 977, 1388, 1400
Tsp45I GTSAC 2 cut(s) 712, 917
TspDTI ATGAA 4 cut(s) 572, 645, 1203, 1352
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 1 cut(s) 381
VpaK11BI GGWCC 1 cut(s) 1325
XapI RAATTY 4 cut(s) 65, 436, 658, 1007
XceI RCATGY 3 cut(s) 183, 204, 971
XcmI CCANNNNNNNNNTGG 1 cut(s) 203
XhoI CTCGAG 1 cut(s) 276
XmiI GTMKAC 2 cut(s) 462, 745
XmnI GAANNNNTTC 1 cut(s) 264
XspI CTAG 1 cut(s) 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.