FvH4_7g15750

intracellular protein transport protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
13575760 .. 13579816
4057 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g15750.t2

Sequence Viewer

Length: 1755 bp
ATGGAAAGAAAAGAAAAGGGTGCAGCAGAAAGTGAAAGAAAAAAGCGAGGATGGATGGTGAAAAAGTTGAAACGCAGAGGAGTATCAGTAAGAGGAGGGGTTTGTAGTACGCCACCGCCCATTTGGAGACTCGAATTATATACTGAGCCTCACACCAACAAACCCAACAACTCTGAGTTTCTCAACCTGAAAGCCAACACCACATCAATCTCTGCCAGAAATCTCTGTGCTGGTCTCTGGGAAATTGAGTCTTACCAGAACCCACTTGCCCAAATGAGTAGAGCAGGAGCTAGACTTGCCCACAAGCACAGGAAGAACAATGGGGCTGAGCTTAACACTCCTACTACTAGGGGCCCTCATGATCAGCCGGCAAGTGCAAGCAGTTTGAGGAAGCTTGTATCCACATCACTGATACAGCACCATCAAGCAGTTGAGAGCAATGGTCATGCTCGTCAGCCCCTATCTCCTTCTAGTTGTGGTAGCTCAATGGAGGCTATAATTAAACAGCTGGTGCATGAAAAGCAATGGGACAGGCAAGAAATGGATGACTTGATGAAGCATATTTCAGAACAAAGTCAAATCAAAGCAGCTGTCCAGTTGGTTAGGGATGAGCTAGAAGGTGAAAGGAAGTTGAGAAAGCATTCAGAGAGCCTACATCGCAAGCTAGCTCGAGAGCTTTCTGAAGTGAAATCTGCTTTCTCCAATGCTTTGAGAGAGCTTGAAAGGGAGAACAAAGCGCGTATCCTATTGGAAAACTTGTGCGATGAGTTTTCCAAGGGAATAAGAGAGTATGAGAAAGAGGTGCGGTCTCTGAAGCACAATCATGAGAAAGATCAGGGTGGTTTGGCCAGCTCTGAAAGATTAATTCTCCATATTTCAGAAGCATGGCTCGATGAACGGATGCAAATGAAGATAGCTGAAGGTCAGAATGATTTTGGAGAGAAGAATACAATTGTGGACAAGTTAGGTTTTGATATAGAGACCTTTCTTCAAGCTAAACGATCTGCTGACTTGAAGATAAATATTGATTTGCCCCAAAAGCAGCTCAAGGAAAACTGCTCACGCCGACAATCATTAGAGTCCTTTCCATTGAATGAGGCTGTAAGTGCACCAGGAAATGCGGCTGGAGATTCTACTGATAGTGGTTCACACTATTTAGTCAGGAGTGTTAGTGGAAAACGAATCGCACGAAGCTCTAGCCAATGGAAAAATAATGATGCAAAGGGACAATATGGAGGAATAGAGAAATCGAGTTCCATGAAGAAAAAGGCAGAGGAGCCCATGAAGAGAAATATGTCGTCTGGTTTGCAAGGACAGTTTAAACAACACATGGCGAGAACCATGTCCTGTGATGGAAACAGAACCCTGCCTGCAGATAGGGAAGATGGCGAGCTGGGAGAAGAGAATGCAGCTATGGTTGACAATCTTGAACAGTCTGTATACTCTAATGCAATCAGAGAAGGTCTGCAGGAAACACAAAGCAAAAGGGTGGAGGCACATGGATTGGATTTATTAAAATCCAATAATCCTGACAGTAACTGCAAGGTGAAAACTTGTATCCAATCTGTGTTTACAGGTAATGCTAGTCCAGTTCAGAAATGGAAGTCTAATCTAACAGCCCCAGATTTTGGAAAATCTGAATCTTCTTTGGATTGGCCCCCAGACCTTGATGAAAATACCTTGATGGCAAAATTACTTGAGGCAAGGTTAGAAGCAAAGAACTCGCGCACCAGAAGTTCTAAAGGGCCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

585

Amino Acids

65.5

Weight (kDa)

9.16

Isoelectric Point (pI)

52.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1628
AccI GTMKAC 1 cut(s) 1440
AccII CGCG 2 cut(s) 739, 1726
AciI CCGC 3 cut(s) 116, 805, 1121
AcoI YGGCCR 1 cut(s) 846
AcuI CTGAAG 3 cut(s) 702, 833, 939
AfaI GTAC 1 cut(s) 109
AfiI CCNNNNNNNGG 1 cut(s) 1628
AgsI TTSAA 6 cut(s) 70, 722, 992, 1015, 1093, 1430
AjnI CCWGG 1 cut(s) 1111
Alw21I GWGCWC 1 cut(s) 1111
Alw26I GTCTC 4 cut(s) 121, 239, 813, 974
Alw44I GTGCAC 1 cut(s) 1107
AlwNI CAGNNNCTG 1 cut(s) 1539
Ama87I CYCGRG 1 cut(s) 669
AoxI GGCC 4 cut(s) 352, 846, 1655, 1745
ApaI GGGCCC 1 cut(s) 356
ApaLI GTGCAC 1 cut(s) 1107
ApeKI GCWGC 4 cut(s) 23, 587, 1042, 1409
ArsI GACNNNNNNTTYG 2 cut(s) 576, 608
AseI ATTAAT 1 cut(s) 863
Asp700I GAANNNNTTC 1 cut(s) 640
AspLEI GCGC 2 cut(s) 739, 1728
AspS9I GGNCC 4 cut(s) 352, 353, 1656, 1745
AsuHPI GGTGA 3 cut(s) 70, 632, 1558
AsuNHI GCTAGC 1 cut(s) 664
AvaI CYCGRG 1 cut(s) 669
BaeGI GKGCMC 2 cut(s) 356, 1111
BalI TGGCCA 1 cut(s) 848
BanII GRGCYC 2 cut(s) 356, 1281
Bbv12I GWGCWC 1 cut(s) 1111
BbvI GCAGC 4 cut(s) 35, 599, 1054, 1421
BccI CCATC 6 cut(s) 45, 49, 429, 1346, 1379, 1678
BcgI CGANNNNNNTGC 2 cut(s) 1704, 1738
BciT130I CCWGG 1 cut(s) 1113
BciVI GTATCC 3 cut(s) 409, 752, 1568
BclI TGATCA 1 cut(s) 361
BcoDI GTCTC 4 cut(s) 121, 239, 813, 974
BfaI CTAG 7 cut(s) 291, 348, 471, 614, 665, 1197, 1584
BfmI CTRYAG 2 cut(s) 1371, 1466
BfuI GTATCC 3 cut(s) 409, 752, 1568
BisI GCNGC 5 cut(s) 24, 588, 1043, 1122, 1410
BlpI GCTNAGC 1 cut(s) 327
BlsI GCNGC 5 cut(s) 25, 589, 1044, 1123, 1411
Bme1390I CCNGG 1 cut(s) 1113
BmeT110I CYCGRG 1 cut(s) 669
BmgT120I GGNCC 4 cut(s) 352, 353, 1656, 1745
BmiI GGNNCC 4 cut(s) 353, 354, 1278, 1658
BmrFI CCNGG 1 cut(s) 1113
BmsI GCATC 2 cut(s) 891, 1207
BmtI GCTAGC 1 cut(s) 668
BpmI CTGGAG 1 cut(s) 1146
Bpu1102I GCTNAGC 1 cut(s) 327
BpuEI CTTGAG 2 cut(s) 1031, 1718
BsaI GGTCTC 3 cut(s) 239, 813, 974
BsaJI CCNNGG 1 cut(s) 774
BsaXI ACNNNNNCTCC 4 cut(s) 72, 102, 1156, 1186
Bsc4I CCNNNNNNNGG 1 cut(s) 1628
Bse118I RCCGGY 1 cut(s) 367
Bse1I ACTGG 2 cut(s) 595, 1589
Bse3DI GCAATG 2 cut(s) 445, 530
BseBI CCWGG 1 cut(s) 1113
BseDI CCNNGG 1 cut(s) 774
BseGI GGATG 5 cut(s) 56, 60, 550, 613, 906
BseLI CCNNNNNNNGG 1 cut(s) 1628
BseMI GCAATG 2 cut(s) 445, 530
BseMII CTCAG 3 cut(s) 135, 165, 318
BseNI ACTGG 2 cut(s) 595, 1589
BseRI GAGGAG 3 cut(s) 93, 108, 1289
BseSI GKGCMC 2 cut(s) 356, 1111
BseXI GCAGC 4 cut(s) 35, 599, 1054, 1421
BseYI CCCAGC 1 cut(s) 1393
BsgI GTGCAG 1 cut(s) 42
Bsh1236I CGCG 2 cut(s) 739, 1726
BshFI GGCC 4 cut(s) 354, 848, 1657, 1747
BsiHKAI GWGCWC 1 cut(s) 1111
BsiHKCI CYCGRG 1 cut(s) 669
BsiSI CCGG 1 cut(s) 368
BslFI GGGAC 2 cut(s) 542, 1239
BslI CCNNNNNNNGG 1 cut(s) 1628
BsmAI GTCTC 4 cut(s) 121, 239, 813, 974
BsmFI GGGAC 2 cut(s) 542, 1239
BsmI GAATGC 2 cut(s) 640, 1411
BsnI GGCC 4 cut(s) 354, 848, 1657, 1747
Bso31I GGTCTC 3 cut(s) 239, 813, 974
BsoBI CYCGRG 1 cut(s) 669
Bsp120I GGGCCC 1 cut(s) 352
Bsp1286I GDGCHC 3 cut(s) 356, 1111, 1281
Bsp143I GATC 3 cut(s) 361, 832, 1001
Bsp1720I GCTNAGC 1 cut(s) 327
BspACI CCGC 3 cut(s) 116, 805, 1121
BspANI GGCC 4 cut(s) 354, 848, 1657, 1747
BspCNI CTCAG 3 cut(s) 136, 166, 319
BspFNI CGCG 2 cut(s) 739, 1726
BspHI TCATGA 2 cut(s) 358, 823
BspLI GGNNCC 4 cut(s) 353, 354, 1278, 1658
BspMAI CTGCAG 2 cut(s) 1375, 1470
BspOI GCTAGC 1 cut(s) 668
BspTNI GGTCTC 3 cut(s) 239, 813, 974
BsrDI GCAATG 2 cut(s) 445, 530
BsrFI RCCGGY 1 cut(s) 367
BsrI ACTGG 2 cut(s) 595, 1589
BssAI RCCGGY 1 cut(s) 367
BssECI CCNNGG 1 cut(s) 774
BssMI GATC 3 cut(s) 361, 832, 1001
BssNAI GTATAC 1 cut(s) 1441
BssT1I CCWWGG 1 cut(s) 774
Bst1107I GTATAC 1 cut(s) 1441
Bst2UI CCWGG 1 cut(s) 1113
Bst4CI ACNGT 3 cut(s) 1317, 1434, 1535
Bst6I CTCTTC 2 cut(s) 1280, 1395
BstC8I GCNNGC 7 cut(s) 369, 379, 662, 666, 850, 1371, 1391
BstDEI CTNAG 3 cut(s) 144, 174, 327
BstF5I GGATG 5 cut(s) 56, 60, 550, 613, 906
BstFNI CGCG 2 cut(s) 739, 1726
BstHHI GCGC 2 cut(s) 739, 1728
BstKTI GATC 3 cut(s) 364, 835, 1004
BstMAI GTCTC 4 cut(s) 121, 239, 813, 974
BstMBI GATC 3 cut(s) 361, 832, 1001
BstMWI GCNNNNNNNGC 5 cut(s) 296, 520, 657, 1039, 1106
BstNI CCWGG 1 cut(s) 1113
BstSCI CCNGG 1 cut(s) 1111
BstSFI CTRYAG 2 cut(s) 1371, 1466
BstSLI GKGCMC 2 cut(s) 356, 1111
BstUI CGCG 2 cut(s) 739, 1726
BstV1I GCAGC 4 cut(s) 35, 599, 1054, 1421
BstZ17I GTATAC 1 cut(s) 1441
BsuI GTATCC 3 cut(s) 409, 752, 1568
BsuRI GGCC 4 cut(s) 354, 848, 1657, 1747
BtgZI GCGATG 2 cut(s) 641, 777
BtsCI GGATG 5 cut(s) 56, 60, 550, 613, 906
BtsIMutI CAGTG 1 cut(s) 407
Cac8I GCNNGC 7 cut(s) 369, 379, 662, 666, 850, 1371, 1391
CaiI CAGNNNCTG 1 cut(s) 1539
CciI TCATGA 2 cut(s) 358, 823
CfoI GCGC 2 cut(s) 739, 1728
Cfr10I RCCGGY 1 cut(s) 367
Cfr13I GGNCC 4 cut(s) 352, 353, 1656, 1745
Csp6I GTAC 1 cut(s) 108
CviQI GTAC 1 cut(s) 108
DdeI CTNAG 3 cut(s) 144, 174, 327
DpnI GATC 3 cut(s) 363, 834, 1003
DpnII GATC 3 cut(s) 361, 832, 1001
DraI TTTAAA 1 cut(s) 1321
EaeI YGGCCR 1 cut(s) 846
Eam1104I CTCTTC 2 cut(s) 1280, 1395
EarI CTCTTC 2 cut(s) 1280, 1395
Eco130I CCWWGG 1 cut(s) 774
Eco24I GRGCYC 2 cut(s) 356, 1281
Eco31I GGTCTC 3 cut(s) 239, 813, 974
Eco57I CTGAAG 3 cut(s) 702, 833, 939
Eco88I CYCGRG 1 cut(s) 669
EcoO109I RGGNCCY 3 cut(s) 352, 353, 1745
EcoRII CCWGG 1 cut(s) 1111
EcoT14I CCWWGG 1 cut(s) 774
EcoT38I GRGCYC 2 cut(s) 356, 1281
ErhI CCWWGG 1 cut(s) 774
FaqI GGGAC 2 cut(s) 542, 1239
FbaI TGATCA 1 cut(s) 361
FblI GTMKAC 1 cut(s) 1440
Fnu4HI GCNGC 5 cut(s) 24, 588, 1043, 1122, 1410
FokI GGATG 5 cut(s) 63, 67, 557, 620, 913
FriOI GRGCYC 2 cut(s) 356, 1281
Fsp4HI GCNGC 5 cut(s) 24, 588, 1043, 1122, 1410
FspBI CTAG 7 cut(s) 291, 348, 471, 614, 665, 1197, 1584
GlaI GCGC 2 cut(s) 738, 1727
GluI GCNGC 5 cut(s) 24, 588, 1043, 1122, 1410
GsaI CCCAGC 1 cut(s) 1397
GsuI CTGGAG 1 cut(s) 1146
HaeIII GGCC 4 cut(s) 354, 848, 1657, 1747
HapII CCGG 1 cut(s) 368
HhaI GCGC 2 cut(s) 739, 1728
Hin6I GCGC 2 cut(s) 737, 1726
HinP1I GCGC 2 cut(s) 737, 1726
HincII GTYRAC 1 cut(s) 1420
HindII GTYRAC 1 cut(s) 1420
HindIII AAGCTT 1 cut(s) 392
HinfI GANTC 6 cut(s) 129, 248, 1079, 1130, 1182, 1640
HpaII CCGG 1 cut(s) 368
HphI GGTGA 3 cut(s) 70, 632, 1558
Hpy166II GTNNAC 6 cut(s) 958, 1109, 1148, 1420, 1441, 1572
Hpy188III TCNNGA 6 cut(s) 359, 671, 824, 1162, 1427, 1529
Hpy8I GTNNAC 6 cut(s) 958, 1109, 1148, 1420, 1441, 1572
HpyAV CCTTC 4 cut(s) 477, 611, 914, 1454
HpyCH4III ACNGT 3 cut(s) 1317, 1434, 1535
HpyF10VI GCNNNNNNNGC 5 cut(s) 296, 520, 657, 1039, 1106
HpyF3I CTNAG 3 cut(s) 144, 174, 327
HspAI GCGC 2 cut(s) 737, 1726
KroI GCCGGC 1 cut(s) 367
KroNI GCCGGC 1 cut(s) 369
Ksp22I TGATCA 1 cut(s) 361
Kzo9I GATC 3 cut(s) 361, 832, 1001
LmnI GCTCC 2 cut(s) 287, 1276
Lsp1109I GCAGC 4 cut(s) 35, 599, 1054, 1421
LweI GCATC 2 cut(s) 891, 1207
MaeI CTAG 7 cut(s) 291, 348, 471, 614, 665, 1197, 1584
MaeIII GTNAC 1 cut(s) 1535
MalI GATC 3 cut(s) 363, 834, 1003
MboI GATC 3 cut(s) 361, 832, 1001
MfeI CAATTG 1 cut(s) 951
MhlI GDGCHC 3 cut(s) 356, 1111, 1281
MlsI TGGCCA 1 cut(s) 848
MluCI AATT 6 cut(s) 134, 243, 498, 864, 951, 1691
MluNI TGGCCA 1 cut(s) 848
MlyI GAGTC 3 cut(s) 123, 257, 1088
Mox20I TGGCCA 1 cut(s) 848
MroNI GCCGGC 1 cut(s) 367
MroXI GAANNNNTTC 1 cut(s) 640
MscI TGGCCA 1 cut(s) 848
MseI TTAA 5 cut(s) 333, 501, 863, 1320, 1514
MslI CAYNNNNRTG 1 cut(s) 822
Msp20I TGGCCA 1 cut(s) 848
MspA1I CMGCKG 2 cut(s) 508, 590
MspI CCGG 1 cut(s) 368
MspR9I CCNGG 1 cut(s) 1113
MssI GTTTAAAC 1 cut(s) 1321
MunI CAATTG 1 cut(s) 951
Mva1269I GAATGC 2 cut(s) 640, 1411
MvaI CCWGG 1 cut(s) 1113
MvnI CGCG 2 cut(s) 739, 1726
MwoI GCNNNNNNNGC 5 cut(s) 296, 520, 657, 1039, 1106
NaeI GCCGGC 1 cut(s) 369
NdeII GATC 3 cut(s) 361, 832, 1001
NgoMIV GCCGGC 1 cut(s) 367
NheI GCTAGC 1 cut(s) 664
NlaIV GGNNCC 4 cut(s) 353, 354, 1278, 1658
PaeR7I CTCGAG 1 cut(s) 669
PagI TCATGA 2 cut(s) 358, 823
PcsI WCGNNNNNNNCGW 1 cut(s) 1186
PctI GAATGC 2 cut(s) 640, 1411
PdiI GCCGGC 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 640
PfeI GAWTC 3 cut(s) 1130, 1182, 1640
PflMI CCANNNNNTGG 1 cut(s) 1628
PkrI GCNGC 5 cut(s) 25, 589, 1044, 1123, 1411
PleI GAGTC 3 cut(s) 123, 256, 1087
PmeI GTTTAAAC 1 cut(s) 1321
PpsI GAGTC 3 cut(s) 123, 256, 1087
PshBI ATTAAT 1 cut(s) 863
Psp6I CCWGG 1 cut(s) 1111
PspFI CCCAGC 1 cut(s) 1393
PspGI CCWGG 1 cut(s) 1111
PspN4I GGNNCC 4 cut(s) 353, 354, 1278, 1658
PspOMI GGGCCC 1 cut(s) 352
PspPI GGNCC 4 cut(s) 352, 353, 1656, 1745
PstI CTGCAG 2 cut(s) 1375, 1470
PstNI CAGNNNCTG 1 cut(s) 1539
PvuII CAGCTG 2 cut(s) 508, 590
RsaI GTAC 1 cut(s) 109
RsaNI GTAC 1 cut(s) 108
RseI CAYNNNNRTG 1 cut(s) 822
SaqAI TTAA 5 cut(s) 333, 501, 863, 1320, 1514
SatI GCNGC 5 cut(s) 24, 588, 1043, 1122, 1410
Sau3AI GATC 3 cut(s) 361, 832, 1001
Sau96I GGNCC 4 cut(s) 352, 353, 1656, 1745
SchI GAGTC 3 cut(s) 123, 257, 1088
ScrFI CCNGG 1 cut(s) 1113
SduI GDGCHC 3 cut(s) 356, 1111, 1281
SfaNI GCATC 2 cut(s) 891, 1207
SfcI CTRYAG 2 cut(s) 1371, 1466
Sfr274I CTCGAG 1 cut(s) 669
SlaI CTCGAG 1 cut(s) 669
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 3 cut(s) 669, 1046, 1697
SmoI CTYRAG 3 cut(s) 669, 1046, 1697
Sse9I AATT 6 cut(s) 134, 243, 498, 864, 951, 1691
SsiI CCGC 3 cut(s) 116, 805, 1121
SspI AATATT 1 cut(s) 1024
SspMI CTAG 7 cut(s) 291, 348, 471, 614, 665, 1197, 1584
StyD4I CCNGG 1 cut(s) 1111
StyI CCWWGG 1 cut(s) 774
TaaI ACNGT 3 cut(s) 1317, 1434, 1535
TaqI TCGA 4 cut(s) 132, 670, 891, 1250
TasI AATT 6 cut(s) 134, 243, 498, 864, 951, 1691
TauI GCSGC 1 cut(s) 1124
TfiI GAWTC 3 cut(s) 1130, 1182, 1640
Tru1I TTAA 5 cut(s) 333, 501, 863, 1320, 1514
Tru9I TTAA 5 cut(s) 333, 501, 863, 1320, 1514
TscAI CASTG 1 cut(s) 414
TseI GCWGC 4 cut(s) 23, 587, 1042, 1409
TspDTI ATGAA 7 cut(s) 531, 569, 909, 923, 1274, 1298, 1686
TspGWI ACGGA 1 cut(s) 913
TspRI CASTG 1 cut(s) 414
Van91I CCANNNNNTGG 1 cut(s) 1628
VneI GTGCAC 1 cut(s) 1107
VspI ATTAAT 1 cut(s) 863
XcmI CCANNNNNNNNNTGG 2 cut(s) 120, 1596
XhoI CTCGAG 1 cut(s) 669
XmiI GTMKAC 1 cut(s) 1440
XmnI GAANNNNTTC 1 cut(s) 640
XspI CTAG 7 cut(s) 291, 348, 471, 614, 665, 1197, 1584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.