Rh1AG276700

intracellular protein transport protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
50512721 .. 50516374
3654 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG276700.1

Sequence Viewer

Length: 1425 bp
ATGGAGGTTGCACCATATAAGGGAAGGAAGGGTGAGTCAAGTTGCGGTCTTAAAACATCCACAGAATTACTTAAAGTACTCAATCGTATCTGGAGTCTTGAAGAACAACATGCATCTAATATATCATTGGTAAAAGCACTGAAAATGGAACTGCATCATTCTCAAGCTATAATTAAAGAGTTGGTGCATGAAAAGCAATGGGATAGGCAAGAAATGGATGACTTGATGAAGCAAGTTTCAGACCAAAGTCGAAACAAAGCTGCTGTTCAGTTGGTCAGTGATGAGCTAGAAGGTGAAAGGAAGTTGAGAAAGCATTCAGAGAGCCTGCATCGCAAGCTAGCTCGAGAGCTTTCTGAAGTGAAATCCGCTTTCTCCAATGCTTTGAGAGAGCTTGAAAGGGAGAGCAAAGCACGTATCCTATTGGAAAACTTGTGCGATGAGTTTTCCAAGGGAATAAGAGAGTATGAGCAAGAGGTGCGATCTCTGAAGCACAATCCTGAGAAGGATCAGAGTGGTTTGGCGAGCTCTGAGAGATTAATTCTCCATATTTCAGAAGCATGGCTTGATGAACGGATGCAAATGAAGATAGCCGAAGCTCAGAATAATCTTGGAGAGAAGAATACTATTGTGGACAAGTTAGGTTTTGATATAGAGACTTTTCTTCAAGCTAAACGATCTGTTGACTCGAAGATAAATATTGAGTTATCCCAAAAGCAGCTCAAGGGAAACTGCTCACGCCGACATTCATTAGAGTCCTTTCCATTGAATGAGGCTGTAAGCGCACCAGGAAATGCGGCTGAAGATTCTACTGATAGTGATTCACACTATTCACCGGCAGTCAGGAGTGCTAGTGGAAAACAAATCACACGAAGCTCTAGACAACAGAAAAATAATGATGCAGAAAGACAATATGGAGGAATAGAGAAATCGAATTCCATGAAGAAAAAGGCAGAGGAGCACATTAAGGGAAATATCTTGTCTGGTTTGCAAGGCCAGTTTAAACAACACATGGCGAGAACCATGTCCTGTCATGGAAACAGGACCCTGGCTGCAGATAGGGAAGATGGCAAGCTGGGAGAAGAGAATCCCGTTATGGTTGACAATCTTGAAGAATCTGTATACTCTGATGCAATCAGAGAAGGTCTTCACGAAATACAAAGCAAAAGGGTTGACGCACATGGATTAAAATCCAATCATCCTGACAGTAACTGCAGGGTGAAAACTTGTATCCAATCTGTGTTTACAGGTAATGCTAGTCCAGTTCAGGGATGGAAGTCTAATTTAACAGCCCCAGATTTTGGAAAATCTGAATCTTCTTTGGATTGGCCCCCAGACCTTGATGAAAATACCTTGATGGCAAAATTACTTGAAGCAAGGTTAGAAGCAAAACAGTCGCGCACCAGAAGTTCAAAAGGGCCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

474

Amino Acids

53.4

Weight (kDa)

6.99

Isoelectric Point (pI)

55.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1298
AccI GTMKAC 1 cut(s) 1119
AccII CGCG 1 cut(s) 1396
AciI CCGC 3 cut(s) 45, 366, 794
AclWI GGATC 1 cut(s) 513
AcsI RAATTY 1 cut(s) 931
AcuI CTGAAG 3 cut(s) 375, 506, 819
AfaI GTAC 1 cut(s) 78
AfiI CCNNNNNNNGG 3 cut(s) 20, 1265, 1298
AgsI TTSAA 7 cut(s) 101, 395, 665, 766, 1109, 1370, 1410
AjnI CCWGG 2 cut(s) 784, 1044
Alw21I GWGCWC 2 cut(s) 527, 960
Alw26I GTCTC 1 cut(s) 647
AlwI GGATC 1 cut(s) 513
AlwNI CAGNNNCTG 1 cut(s) 1209
Ama87I CYCGRG 1 cut(s) 342
AoxI GGCC 3 cut(s) 991, 1325, 1415
ApeKI GCWGC 3 cut(s) 260, 715, 1049
ApoI RAATTY 1 cut(s) 931
AseI ATTAAT 1 cut(s) 536
Asp700I GAANNNNTTC 2 cut(s) 313, 1143
AspLEI GCGC 2 cut(s) 782, 1398
AspS9I GGNCC 3 cut(s) 1041, 1326, 1415
AsuHPI GGTGA 4 cut(s) 44, 305, 822, 1228
AsuNHI GCTAGC 1 cut(s) 337
AvaI CYCGRG 1 cut(s) 342
AvaII GGWCC 1 cut(s) 1041
BanII GRGCYC 1 cut(s) 527
BbsI GAAGAC 1 cut(s) 1136
Bbv12I GWGCWC 2 cut(s) 527, 960
BbvI GCAGC 3 cut(s) 247, 727, 1036
BccI CCATC 3 cut(s) 1058, 1263, 1348
BcgI CGANNNNNNTGC 2 cut(s) 1374, 1408
BciT130I CCWGG 2 cut(s) 786, 1046
BciVI GTATCC 2 cut(s) 425, 1238
BcoDI GTCTC 1 cut(s) 647
BfaI CTAG 5 cut(s) 287, 338, 849, 876, 1254
BfmI CTRYAG 2 cut(s) 1050, 1210
BfuI GTATCC 2 cut(s) 425, 1238
BisI GCNGC 4 cut(s) 261, 716, 795, 1050
BlsI GCNGC 4 cut(s) 262, 717, 796, 1051
BmcAI AGTACT 1 cut(s) 78
Bme1390I CCNGG 2 cut(s) 786, 1046
Bme18I GGWCC 1 cut(s) 1041
BmeT110I CYCGRG 1 cut(s) 342
BmgT120I GGNCC 3 cut(s) 1041, 1326, 1415
BmiI GGNNCC 2 cut(s) 1043, 1328
BmrFI CCNGG 2 cut(s) 786, 1046
BmsI GCATC 6 cut(s) 122, 163, 337, 564, 886, 1117
BmtI GCTAGC 1 cut(s) 341
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 1 cut(s) 1136
BpmI CTGGAG 1 cut(s) 112
BpuEI CTTGAG 2 cut(s) 147, 704
BsaAI YACGTR 1 cut(s) 413
BsaBI GATNNNNATC 1 cut(s) 1186
BsaJI CCNNGG 2 cut(s) 447, 1044
BsaXI ACNNNNNCTCC 2 cut(s) 835, 865
Bsc4I CCNNNNNNNGG 3 cut(s) 20, 1265, 1298
Bse118I RCCGGY 1 cut(s) 832
Bse1I ACTGG 2 cut(s) 994, 1259
Bse3DI GCAATG 1 cut(s) 203
Bse8I GATNNNNATC 1 cut(s) 1186
BseBI CCWGG 2 cut(s) 786, 1046
BseDI CCNNGG 2 cut(s) 447, 1044
BseGI GGATG 5 cut(s) 56, 223, 579, 1195, 1274
BseJI GATNNNNATC 1 cut(s) 1186
BseLI CCNNNNNNNGG 3 cut(s) 20, 1265, 1298
BseMI GCAATG 1 cut(s) 203
BseMII CTCAG 3 cut(s) 489, 519, 611
BseNI ACTGG 2 cut(s) 994, 1259
BseRI GAGGAG 1 cut(s) 968
BseXI GCAGC 3 cut(s) 247, 727, 1036
BseYI CCCAGC 1 cut(s) 1072
Bsh1236I CGCG 1 cut(s) 1396
BshFI GGCC 3 cut(s) 993, 1327, 1417
BsiHKAI GWGCWC 2 cut(s) 527, 960
BsiHKCI CYCGRG 1 cut(s) 342
BsiSI CCGG 1 cut(s) 833
BslI CCNNNNNNNGG 3 cut(s) 20, 1265, 1298
BsmAI GTCTC 1 cut(s) 647
BsmI GAATGC 1 cut(s) 313
BsnI GGCC 3 cut(s) 993, 1327, 1417
BsoBI CYCGRG 1 cut(s) 342
Bsp1286I GDGCHC 2 cut(s) 527, 960
Bsp143I GATC 3 cut(s) 479, 505, 674
BspACI CCGC 3 cut(s) 45, 366, 794
BspANI GGCC 3 cut(s) 993, 1327, 1417
BspCNI CTCAG 3 cut(s) 490, 520, 610
BspFNI CGCG 1 cut(s) 1396
BspLI GGNNCC 2 cut(s) 1043, 1328
BspMAI CTGCAG 2 cut(s) 1054, 1214
BspOI GCTAGC 1 cut(s) 341
BspPI GGATC 1 cut(s) 513
BsrDI GCAATG 1 cut(s) 203
BsrFI RCCGGY 1 cut(s) 832
BsrI ACTGG 2 cut(s) 994, 1259
BssAI RCCGGY 1 cut(s) 832
BssECI CCNNGG 2 cut(s) 447, 1044
BssMI GATC 3 cut(s) 479, 505, 674
BssNAI GTATAC 1 cut(s) 1120
BssT1I CCWWGG 1 cut(s) 447
Bst1107I GTATAC 1 cut(s) 1120
Bst2UI CCWGG 2 cut(s) 786, 1046
Bst4CI ACNGT 2 cut(s) 1205, 1392
Bst6I CTCTTC 1 cut(s) 1074
BstAPI GCANNNNNTGC 1 cut(s) 475
BstBAI YACGTR 1 cut(s) 413
BstC8I GCNNGC 5 cut(s) 326, 335, 339, 523, 1070
BstDEI CTNAG 3 cut(s) 498, 528, 597
BstF5I GGATG 5 cut(s) 56, 223, 579, 1195, 1274
BstFNI CGCG 1 cut(s) 1396
BstHHI GCGC 2 cut(s) 782, 1398
BstKTI GATC 3 cut(s) 482, 508, 677
BstMAI GTCTC 1 cut(s) 647
BstMBI GATC 3 cut(s) 479, 505, 674
BstMWI GCNNNNNNNGC 5 cut(s) 193, 330, 334, 475, 779
BstNI CCWGG 2 cut(s) 786, 1046
BstNSI RCATGY 1 cut(s) 113
BstPAI GACNNNNGTC 1 cut(s) 246
BstSCI CCNGG 2 cut(s) 784, 1044
BstSFI CTRYAG 2 cut(s) 1050, 1210
BstUI CGCG 1 cut(s) 1396
BstV1I GCAGC 3 cut(s) 247, 727, 1036
BstV2I GAAGAC 1 cut(s) 1136
BstZ17I GTATAC 1 cut(s) 1120
BsuI GTATCC 2 cut(s) 425, 1238
BsuRI GGCC 3 cut(s) 993, 1327, 1417
BtgZI GCGATG 2 cut(s) 314, 450
BtsCI GGATG 5 cut(s) 56, 223, 579, 1195, 1274
BtsIMutI CAGTG 2 cut(s) 137, 283
Cac8I GCNNGC 5 cut(s) 326, 335, 339, 523, 1070
CaiI CAGNNNCTG 1 cut(s) 1209
CfoI GCGC 2 cut(s) 782, 1398
Cfr10I RCCGGY 1 cut(s) 832
Cfr13I GGNCC 3 cut(s) 1041, 1326, 1415
CseI GACGC 1 cut(s) 1181
Csp6I GTAC 1 cut(s) 77
CviAII CATG 8 cut(s) 110, 188, 558, 937, 1009, 1021, 1031, 1178
CviQI GTAC 1 cut(s) 77
DdeI CTNAG 3 cut(s) 498, 528, 597
DpnI GATC 3 cut(s) 481, 507, 676
DpnII GATC 3 cut(s) 479, 505, 674
DraI TTTAAA 1 cut(s) 1000
Eam1104I CTCTTC 1 cut(s) 1074
EarI CTCTTC 1 cut(s) 1074
Ecl136II GAGCTC 1 cut(s) 525
Eco130I CCWWGG 1 cut(s) 447
Eco24I GRGCYC 1 cut(s) 527
Eco47I GGWCC 1 cut(s) 1041
Eco53kI GAGCTC 1 cut(s) 525
Eco57I CTGAAG 3 cut(s) 375, 506, 819
Eco88I CYCGRG 1 cut(s) 342
EcoICRI GAGCTC 1 cut(s) 525
EcoO109I RGGNCCY 2 cut(s) 1041, 1415
EcoRI GAATTC 1 cut(s) 931
EcoRII CCWGG 2 cut(s) 784, 1044
EcoT14I CCWWGG 1 cut(s) 447
EcoT22I ATGCAT 1 cut(s) 115
EcoT38I GRGCYC 1 cut(s) 527
ErhI CCWWGG 1 cut(s) 447
FaeI CATG 8 cut(s) 113, 191, 561, 940, 1012, 1024, 1034, 1181
FalI AAGNNNNNCTT 2 cut(s) 546, 578
FatI CATG 8 cut(s) 109, 187, 557, 936, 1008, 1020, 1030, 1177
FblI GTMKAC 1 cut(s) 1119
Fnu4HI GCNGC 4 cut(s) 261, 716, 795, 1050
FokI GGATG 5 cut(s) 43, 230, 586, 1182, 1281
FriOI GRGCYC 1 cut(s) 527
Fsp4HI GCNGC 4 cut(s) 261, 716, 795, 1050
FspBI CTAG 5 cut(s) 287, 338, 849, 876, 1254
GlaI GCGC 2 cut(s) 781, 1397
GluI GCNGC 4 cut(s) 261, 716, 795, 1050
GsaI CCCAGC 1 cut(s) 1076
GsuI CTGGAG 1 cut(s) 112
HaeIII GGCC 3 cut(s) 993, 1327, 1417
HapII CCGG 1 cut(s) 833
HgaI GACGC 1 cut(s) 1181
HhaI GCGC 2 cut(s) 782, 1398
Hin1II CATG 8 cut(s) 113, 191, 561, 940, 1012, 1024, 1034, 1181
Hin6I GCGC 2 cut(s) 780, 1396
HinP1I GCGC 2 cut(s) 780, 1396
HincII GTYRAC 3 cut(s) 682, 1099, 1171
HindII GTYRAC 3 cut(s) 682, 1099, 1171
HinfI GANTC 9 cut(s) 35, 94, 683, 752, 803, 818, 1084, 1112, 1310
HpaII CCGG 1 cut(s) 833
HphI GGTGA 4 cut(s) 44, 305, 822, 1228
Hpy166II GTNNAC 6 cut(s) 631, 682, 1099, 1120, 1171, 1242
Hpy188III TCNNGA 9 cut(s) 91, 98, 344, 497, 841, 876, 1106, 1148, 1199
Hpy8I GTNNAC 6 cut(s) 631, 682, 1099, 1120, 1171, 1242
HpyAV CCTTC 5 cut(s) 18, 22, 284, 496, 1133
HpyCH4III ACNGT 2 cut(s) 1205, 1392
HpyCH4IV ACGT 1 cut(s) 412
HpyF10VI GCNNNNNNNGC 5 cut(s) 193, 330, 334, 475, 779
HpyF3I CTNAG 3 cut(s) 498, 528, 597
HpySE526I ACGT 1 cut(s) 412
Hsp92II CATG 8 cut(s) 113, 191, 561, 940, 1012, 1024, 1034, 1181
HspAI GCGC 2 cut(s) 780, 1396
Kzo9I GATC 3 cut(s) 479, 505, 674
LmnI GCTCC 1 cut(s) 955
Lsp1109I GCAGC 3 cut(s) 247, 727, 1036
LweI GCATC 6 cut(s) 122, 163, 337, 564, 886, 1117
MaeI CTAG 5 cut(s) 287, 338, 849, 876, 1254
MaeII ACGT 1 cut(s) 412
MaeIII GTNAC 1 cut(s) 1205
MalI GATC 3 cut(s) 481, 507, 676
MboI GATC 3 cut(s) 479, 505, 674
MhlI GDGCHC 2 cut(s) 527, 960
MluCI AATT 6 cut(s) 65, 171, 537, 931, 1279, 1361
MlyI GAGTC 4 cut(s) 44, 103, 677, 761
MnlI CCTC 4 cut(s) 466, 763, 908, 946
Mph1103I ATGCAT 1 cut(s) 115
MroXI GAANNNNTTC 2 cut(s) 313, 1143
MseI TTAA 8 cut(s) 51, 72, 174, 536, 963, 999, 1184, 1283
MspI CCGG 1 cut(s) 833
MspR9I CCNGG 2 cut(s) 786, 1046
MssI GTTTAAAC 1 cut(s) 1000
Mva1269I GAATGC 1 cut(s) 313
MvaI CCWGG 2 cut(s) 786, 1046
MvnI CGCG 1 cut(s) 1396
MwoI GCNNNNNNNGC 5 cut(s) 193, 330, 334, 475, 779
NdeII GATC 3 cut(s) 479, 505, 674
NheI GCTAGC 1 cut(s) 337
NlaIII CATG 8 cut(s) 113, 191, 561, 940, 1012, 1024, 1034, 1181
NlaIV GGNNCC 2 cut(s) 1043, 1328
NsiI ATGCAT 1 cut(s) 115
NspI RCATGY 1 cut(s) 113
PaeR7I CTCGAG 1 cut(s) 342
PctI GAATGC 1 cut(s) 313
PdmI GAANNNNTTC 2 cut(s) 313, 1143
PfeI GAWTC 5 cut(s) 803, 818, 1084, 1112, 1310
PflMI CCANNNNNTGG 1 cut(s) 1298
PkrI GCNGC 4 cut(s) 262, 717, 796, 1051
PleI GAGTC 4 cut(s) 43, 102, 677, 760
PmeI GTTTAAAC 1 cut(s) 1000
PpsI GAGTC 4 cut(s) 43, 102, 677, 760
Ppu21I YACGTR 1 cut(s) 413
PpuMI RGGWCCY 1 cut(s) 1041
PshAI GACNNNNGTC 1 cut(s) 246
PshBI ATTAAT 1 cut(s) 536
Psp124BI GAGCTC 1 cut(s) 527
Psp5II RGGWCCY 1 cut(s) 1041
Psp6I CCWGG 2 cut(s) 784, 1044
PspFI CCCAGC 1 cut(s) 1072
PspGI CCWGG 2 cut(s) 784, 1044
PspN4I GGNNCC 2 cut(s) 1043, 1328
PspPI GGNCC 3 cut(s) 1041, 1326, 1415
PspPPI RGGWCCY 1 cut(s) 1041
PstI CTGCAG 2 cut(s) 1054, 1214
PstNI CAGNNNCTG 1 cut(s) 1209
RsaI GTAC 1 cut(s) 78
RsaNI GTAC 1 cut(s) 77
SacI GAGCTC 1 cut(s) 527
SaqAI TTAA 8 cut(s) 51, 72, 174, 536, 963, 999, 1184, 1283
SatI GCNGC 4 cut(s) 261, 716, 795, 1050
Sau3AI GATC 3 cut(s) 479, 505, 674
Sau96I GGNCC 3 cut(s) 1041, 1326, 1415
ScaI AGTACT 1 cut(s) 78
SchI GAGTC 4 cut(s) 44, 103, 677, 761
ScrFI CCNGG 2 cut(s) 786, 1046
SduI GDGCHC 2 cut(s) 527, 960
SfaNI GCATC 6 cut(s) 122, 163, 337, 564, 886, 1117
SfcI CTRYAG 2 cut(s) 1050, 1210
Sfr274I CTCGAG 1 cut(s) 342
SinI GGWCC 1 cut(s) 1041
SlaI CTCGAG 1 cut(s) 342
SmlI CTYRAG 3 cut(s) 162, 342, 719
SmoI CTYRAG 3 cut(s) 162, 342, 719
Sse9I AATT 6 cut(s) 65, 171, 537, 931, 1279, 1361
SsiI CCGC 3 cut(s) 45, 366, 794
SspI AATATT 1 cut(s) 697
SspMI CTAG 5 cut(s) 287, 338, 849, 876, 1254
SstI GAGCTC 1 cut(s) 527
StyD4I CCNGG 2 cut(s) 784, 1044
StyI CCWWGG 1 cut(s) 447
TaaI ACNGT 2 cut(s) 1205, 1392
TaiI ACGT 1 cut(s) 415
TaqI TCGA 4 cut(s) 250, 343, 686, 929
TasI AATT 6 cut(s) 65, 171, 537, 931, 1279, 1361
TatI WGTACW 1 cut(s) 76
TauI GCSGC 1 cut(s) 797
TfiI GAWTC 5 cut(s) 803, 818, 1084, 1112, 1310
Tru1I TTAA 8 cut(s) 51, 72, 174, 536, 963, 999, 1184, 1283
Tru9I TTAA 8 cut(s) 51, 72, 174, 536, 963, 999, 1184, 1283
TscAI CASTG 2 cut(s) 144, 283
TseI GCWGC 3 cut(s) 260, 715, 1049
TspDTI ATGAA 7 cut(s) 204, 242, 582, 596, 735, 953, 1356
TspGWI ACGGA 1 cut(s) 586
TspRI CASTG 2 cut(s) 144, 283
Van91I CCANNNNNTGG 1 cut(s) 1298
VpaK11BI GGWCC 1 cut(s) 1041
VspI ATTAAT 1 cut(s) 536
XapI RAATTY 1 cut(s) 931
XbaI TCTAGA 1 cut(s) 875
XceI RCATGY 1 cut(s) 113
XcmI CCANNNNNNNNNTGG 1 cut(s) 1266
XhoI CTCGAG 1 cut(s) 342
XmiI GTMKAC 1 cut(s) 1119
XmnI GAANNNNTTC 2 cut(s) 313, 1143
XspI CTAG 5 cut(s) 287, 338, 849, 876, 1254
ZrmI AGTACT 1 cut(s) 78
Zsp2I ATGCAT 1 cut(s) 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.