Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0012339

Physical Location & Seq

Genomic Coordinates Reverse (-)

22160856 .. 22165732

Gene Structure 4877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g30440.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGCTGCTTCGGAGGAGAATAATGCATTGTTTCCGATTTTTATTTTGACCATTATGGCACTGGCTCTGGTGCCTTACACAATAATAAAGCTTTGTAGTGCTGCATCGAAGGAAACAAAGAGCATCCACTGCAAGTGCAGTGACTGCTCTCGTTCGGGGAAGTACCGTAGGTCGTTGTTCAAGCGGATTTCGAACTTCTCAACGTGCAGTAACTTGACAATAGTACTGCTTTGGGTTGTCATGATCATCCTGGTTTATTACATCAAAACTCAGAGTTCAGAGAATCAAGTTTTCGACCCATTTCAAATTCTTGGTCTGGAACCCGGAGCTCCAGAATCCGAAATAAAGAAGGCTTATAGGAAACTTTCAGTGGTATACCATCCAGATAAAAATCCAGATCCAGATGCCAACAAGTACTTTGTGGAGAAAATTGTGAAGGCTTATCAGGCTCTGACAGATCCAGTATCGCGACAAAATTATGAAACATATGGCCATCCAGATGGCAGACAGGGGTTTGAAATGGGAATAGCTCTTCCTAAATTCCTACTAGAATCCCAAAAAAATGGTGGTATACTATTGCTCGGGATCGTCGGTGTTTGTATTCTCTTGCCCTTGGTAATAGCTGTTGTATATCTCTCAAAGTCTGCGAAATATACTGGCAACTATGTCATGCACCAGACATTGTCCACTTACTATTACTTTATGAAGCCTTCTCTGGCTCCCAGCAAAGTGATGGACGTCTTCATAAAGGCTGCTGAGTATACCGAAATTCCAATTCGTAGAACTGACAACGAACCCCTCCAGAAGCTTTTTATGCTAGTTAGGAGTGAACTGAATTTGGACCTTAAAAACATCAAGCAAGAGCAGGCAAAATTTTGGAAGCAGCGTCCAGCCCTTGTAAAGACTGAACTGTTGATTCAAGCACAGTTAACTCGTGAGCCAGCATCTCTATCTCCATCTCTGCAAGGTGATTTTAAACATGTTTTGGAACTTGCTCCTCGCCTCCTTGAAGAATTGATGAAGATGGCACTGGTTCCACGCAATGCTCAGGGGCAGGGATGGCTGAGGCCTGCAATTGGAGTGGTGGAACTTTCTCAGTGTATAATTCAGGCTGTTCCCCTAAGTGCAAGGAAGGCTACTGGAGGATCAAGTGAAGGCATTGCCCCCTTTTTGCAGCTGCCACATTTTAGTGAGGCTGTTGTAAAAAAGATAGCCCGCAAGAAGTTGAGAGTGTTTCAGGAGCTTCGTGATATGTCTATGCAAGAGCGTGCTGAGCTGCTTTCTCAAGTTGCTGGTTTCTCACCCGCTGAAGTAGAAGATGTTGAAACGGTTTTAGCAGCAATGCCTTCCATATCACTTGACGTTAAATGTGAGACTGAAGGTGAAGAGGGTATACAAGAGGGTGACATTGTCACTATTAATGCTTGGGTGACACTACGACGTGATAATGGTCTGATTGGTGCCCTTCCCCATGCCCCCTACTTCCCGTTCCACAAGGAGGAAAATTTCTGGTTTTTGCTTGCCGACAGTGTTTCCAATAATGTTTGGTTCTGGCAGAAGGTAAATTTCATGGAGGAAGCTGCAGCAATCACTGCTGCTTCCAAGACAATTGAGGATACAATGGAGGGTTCAGGAGCAAACATGAAGGAAATCAGTGCCACTATCAAAAAAACAGTCGACAAGGTAAAGAGCGGATCTAGATTAGTAACAGGCAAGTTACCTGCCCCAGCAGAGGGGAACTACAATTTGACATGTTACTGTCTGTGCGACTCTTGGCTTGGTTGTGATAGAAGGACAAACTTGAAGGTAAAGATTTTGAAGCGTACCCGAGCCGGTACACGTGGCGGTTTTGTGGCCGAAGATGGACCGATTACAGAGGACGGGATTGAAGAGGAGGAAGATGCTGATGACGAGGAATACGACGAGGATTATGAGAGTGAGTACAGTGAAGATGAGGCAGATGAACAACAGGATACAAAACAGAAAGGCCCTGCTGCAAATGGCAAGGCTCATAATCAAGGCTCAGACTCAGAAGGTTCAGGTTCAGAGGAGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001655 GO:0001889 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006620 GO:0006807 GO:0006810 GO:0006886 GO:0007275 GO:0007568 GO:0008104 GO:0008150 GO:0008152 GO:0010259 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034613 GO:0042175 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045047 GO:0045184 GO:0046907 GO:0048513 GO:0048731 GO:0048732 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061008 GO:0070727 GO:0070972 GO:0071702 GO:0071705 GO:0071944 GO:0072001 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko03060 ko04141 map03060 map04141

Pfam Domains

Protein Families

DnaJ Sec63

Protein Analysis

686

Amino Acids

76.38

Weight (kDa)

5.38

Isoelectric Point (pI)

48.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	99 - 161	1.4e-19	DnaJ domain
Sec63	PF02889	221 - 601	1.2e-23	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79940 AT1G79940 AT1G79940 AT1G79940
fragaria_vesca	FvH4_7g30440 FvH4_7g30440
malus_domestica	MD01G1210000.v1.1 MD07G1280100.v1.1
prunus_persica	Prupe.2G302300_v2.0.a1
pyrus_communis	pycom01g22050
rosa_chinensis	RchiOBHm_Chr1g0378591
rosa_laevigata	RLG00000026420
rosa_multiflora	Rmu_sc0002395.1_g000009
rosa_roxburghii	Rroxscaffold_4G00280370
rosa_rugosa	Rorug01G0409800
rosa_samantha	Rh1AG431300 Rh1BG389600 Rh1DG420800
rosa_wichuraiana	Rw1G037780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	741
Acc36I	ACCTGC	1 cut(s)	1729
AccB1I	GGYRCC	2 cut(s)	70, 1460
AccBSI	CCGCTC	1 cut(s)	1692
AccI	GTMKAC	5 cut(s)	375, 571, 761, 1393, 1677
AccII	CGCG	1 cut(s)	469
AciI	CCGC	5 cut(s)	184, 1216, 1305, 1692, 1845
AclWI	GGATC	5 cut(s)	392, 452, 593, 1153, 1702
AcoI	YGGCCR	2 cut(s)	490, 1854
AcsI	RAATTY	7 cut(s)	306, 539, 768, 835, 872, 1504, 1564
AcuI	CTGAAG	2 cut(s)	1329, 1398
AcvI	CACGTG	1 cut(s)	1841
AcyI	GRCGYC	1 cut(s)	738
AfaI	GTAC	6 cut(s)	164, 225, 416, 1825, 1837, 1943
AfiI	CCNNNNNNNGG	4 cut(s)	1076, 1498, 1732, 1733
AflIII	ACRYGT	3 cut(s)	979, 1751, 1838
AgsI	TTSAA	9 cut(s)	181, 305, 518, 920, 1010, 1325, 1804, 1819, 1889
AjiI	CACGTC	1 cut(s)	1442
AjnI	CCWGG	1 cut(s)	249
AluBI	AGCT	9 cut(s)	91, 329, 530, 623, 808, 1177, 1243, 1276, 1580
AluI	AGCT	9 cut(s)	91, 329, 530, 623, 808, 1177, 1243, 1276, 1580
Alw21I	GWGCWC	1 cut(s)	331
Alw26I	GTCTC	1 cut(s)	1367
AlwI	GGATC	5 cut(s)	392, 452, 593, 1153, 1702
AlwNI	CAGNNNCTG	2 cut(s)	144, 451
Ama87I	CYCGRG	2 cut(s)	581, 1827
AoxI	GGCC	4 cut(s)	490, 1067, 1854, 1987
ApoI	RAATTY	7 cut(s)	306, 539, 768, 835, 872, 1504, 1564
ArsI	GACNNNNNNTTYG	4 cut(s)	298, 330, 1659, 1691
AseI	ATTAAT	1 cut(s)	1419
AspS9I	GGNCC	3 cut(s)	841, 1865, 1988
AsuC2I	CCSGG	1 cut(s)	324
AsuHPI	GGTGA	5 cut(s)	980, 1293, 1394, 1415, 1441
AsuII	TTCGAA	1 cut(s)	191
AvaI	CYCGRG	2 cut(s)	581, 1827
AvaII	GGWCC	2 cut(s)	841, 1865
BaeGI	GKGCMC	1 cut(s)	1465
BalI	TGGCCA	1 cut(s)	492
BanI	GGYRCC	2 cut(s)	70, 1460
BanII	GRGCYC	1 cut(s)	331
BarI	GAAGNNNNNNTAC	2 cut(s)	1377, 1409
BauI	CACGAG	1 cut(s)	933
BbrPI	CACGTG	1 cut(s)	1841
BbsI	GAAGAC	1 cut(s)	733
Bbv12I	GWGCWC	1 cut(s)	331
BbvCI	CCTCAGC	1 cut(s)	1064
BccI	CCATC	8 cut(s)	387, 494, 501, 727, 964, 1018, 1053, 1856
BciT130I	CCWGG	1 cut(s)	251
BciVI	GTATCC	2 cut(s)	1609, 1966
BclI	TGATCA	1 cut(s)	243
BcnI	CCSGG	1 cut(s)	324
BcoDI	GTCTC	1 cut(s)	1367
BfaI	CTAG	4 cut(s)	548, 818, 1698, 2056
BfmI	CTRYAG	1 cut(s)	1581
BfuAI	ACCTGC	1 cut(s)	1729
BfuI	GTATCC	2 cut(s)	1609, 1966
BlpI	GCTNAGC	1 cut(s)	1272
BmcAI	AGTACT	2 cut(s)	225, 416
Bme1390I	CCNGG	2 cut(s)	251, 324
Bme18I	GGWCC	2 cut(s)	841, 1865
BmeT110I	CYCGRG	2 cut(s)	581, 1827
BmgBI	CACGTC	1 cut(s)	1442
BmgT120I	GGNCC	3 cut(s)	841, 1865, 1988
BmiI	GGNNCC	5 cut(s)	72, 321, 720, 1035, 1462
BmrFI	CCNGG	2 cut(s)	251, 324
BmsI	GCATC	5 cut(s)	113, 132, 394, 953, 1891
BpiI	GAAGAC	1 cut(s)	733
BpmI	CTGGAG	3 cut(s)	315, 785, 1161
Bpu10I	CCTNAGC	2 cut(s)	1047, 1064
Bpu1102I	GCTNAGC	1 cut(s)	1272
Bpu14I	TTCGAA	1 cut(s)	191
BpuEI	CTTGAG	1 cut(s)	1269
BpuMI	CCSGG	1 cut(s)	324
BsaAI	YACGTR	1 cut(s)	1841
BsaBI	GATNNNNATC	1 cut(s)	390
BsaHI	GRCGYC	1 cut(s)	738
BsaJI	CCNNGG	1 cut(s)	612
Bsc4I	CCNNNNNNNGG	4 cut(s)	1076, 1498, 1732, 1733
Bse118I	RCCGGY	1 cut(s)	1832
Bse1I	ACTGG	5 cut(s)	66, 461, 661, 1035, 1144
Bse3DI	GCAATG	3 cut(s)	1048, 1158, 1347
Bse8I	GATNNNNATC	1 cut(s)	390
BseBI	CCWGG	1 cut(s)	251
BseDI	CCNNGG	1 cut(s)	612
BseGI	GGATG	5 cut(s)	123, 246, 379, 493, 1064
BseJI	GATNNNNATC	1 cut(s)	390
BseLI	CCNNNNNNNGG	4 cut(s)	1076, 1498, 1732, 1733
BseMI	GCAATG	3 cut(s)	1048, 1158, 1347
BseMII	CTCAG	8 cut(s)	284, 747, 1055, 1061, 1109, 1263, 2037, 2043
BseNI	ACTGG	5 cut(s)	66, 461, 661, 1035, 1144
BseRI	GAGGAG	3 cut(s)	29, 987, 1907
BseSI	GKGCMC	1 cut(s)	1465
BseYI	CCCAGC	2 cut(s)	722, 1726
BsgI	GTGCAG	2 cut(s)	157, 226
Bsh1236I	CGCG	1 cut(s)	469
BshFI	GGCC	4 cut(s)	492, 1069, 1856, 1989
BshNI	GGYRCC	2 cut(s)	70, 1460
BsiHKAI	GWGCWC	1 cut(s)	331
BsiHKCI	CYCGRG	2 cut(s)	581, 1827
BsiSI	CCGG	2 cut(s)	324, 1833
BslI	CCNNNNNNNGG	4 cut(s)	1076, 1498, 1732, 1733
BsmAI	GTCTC	1 cut(s)	1367
BsnI	GGCC	4 cut(s)	492, 1069, 1856, 1989
BsoBI	CYCGRG	2 cut(s)	581, 1827
Bsp119I	TTCGAA	1 cut(s)	191
Bsp1286I	GDGCHC	2 cut(s)	331, 1465
Bsp143I	GATC	6 cut(s)	243, 397, 457, 585, 1145, 1694
Bsp1720I	GCTNAGC	1 cut(s)	1272
Bsp68I	TCGCGA	1 cut(s)	469
BspACI	CCGC	5 cut(s)	184, 1216, 1305, 1692, 1845
BspANI	GGCC	4 cut(s)	492, 1069, 1856, 1989
BspCNI	CTCAG	8 cut(s)	283, 748, 1056, 1060, 1108, 1264, 2036, 2042
BspFNI	CGCG	1 cut(s)	469
BspHI	TCATGA	1 cut(s)	240
BspLI	GGNNCC	5 cut(s)	72, 321, 720, 1035, 1462
BspMAI	CTGCAG	1 cut(s)	1585
BspMI	ACCTGC	1 cut(s)	1729
BspPI	GGATC	5 cut(s)	392, 452, 593, 1153, 1702
BspQI	GCTCTTC	1 cut(s)	537
BspT104I	TTCGAA	1 cut(s)	191
BspT107I	GGYRCC	2 cut(s)	70, 1460
BsrBI	CCGCTC	1 cut(s)	1692
BsrDI	GCAATG	3 cut(s)	1048, 1158, 1347
BsrFI	RCCGGY	1 cut(s)	1832
BsrI	ACTGG	5 cut(s)	66, 461, 661, 1035, 1144
BssAI	RCCGGY	1 cut(s)	1832
BssECI	CCNNGG	1 cut(s)	612
BssMI	GATC	6 cut(s)	243, 397, 457, 585, 1145, 1694
BssNAI	GTATAC	4 cut(s)	376, 572, 762, 1394
BssNI	GRCGYC	1 cut(s)	738
BssSI	CACGAG	1 cut(s)	933
BssT1I	CCWWGG	1 cut(s)	612
Bst1107I	GTATAC	4 cut(s)	376, 572, 762, 1394
Bst2BI	CACGAG	1 cut(s)	933
Bst2UI	CCWGG	1 cut(s)	251
Bst4CI	ACNGT	8 cut(s)	167, 912, 927, 1330, 1529, 1675, 1760, 1946
Bst6I	CTCTTC	3 cut(s)	537, 1380, 1884
BstACI	GRCGYC	1 cut(s)	738
BstAPI	GCANNNNNTGC	3 cut(s)	129, 144, 1592
BstBAI	YACGTR	1 cut(s)	1841
BstBI	TTCGAA	1 cut(s)	191
BstC8I	GCNNGC	6 cut(s)	867, 942, 1071, 1216, 1269, 1521
BstDEI	CTNAG	9 cut(s)	270, 756, 1047, 1064, 1095, 1121, 1272, 2023, 2029
BstF5I	GGATG	5 cut(s)	123, 246, 379, 493, 1064
BstFNI	CGCG	1 cut(s)	469
BstKTI	GATC	6 cut(s)	246, 400, 460, 588, 1148, 1697
BstMAI	GTCTC	1 cut(s)	1367
BstMBI	GATC	6 cut(s)	243, 397, 457, 585, 1145, 1694
BstMWI	GCNNNNNNNGC	8 cut(s)	129, 144, 446, 814, 1060, 1133, 1273, 1592
BstNI	CCWGG	1 cut(s)	251
BstNSI	RCATGY	2 cut(s)	983, 1755
BstSCI	CCNGG	2 cut(s)	249, 322
BstSFI	CTRYAG	1 cut(s)	1581
BstSLI	GKGCMC	1 cut(s)	1465
BstUI	CGCG	1 cut(s)	469
BstV2I	GAAGAC	1 cut(s)	733
BstX2I	RGATCY	3 cut(s)	397, 457, 1694
BstXI	CCANNNNNNTGG	2 cut(s)	500, 563
BstYI	RGATCY	3 cut(s)	397, 457, 1694
BstZ17I	GTATAC	4 cut(s)	376, 572, 762, 1394
BsuI	GTATCC	2 cut(s)	1609, 1966
BsuRI	GGCC	4 cut(s)	492, 1069, 1856, 1989
BtrI	CACGTC	1 cut(s)	1442
BtsCI	GGATG	5 cut(s)	123, 246, 379, 493, 1064
BtsI	GCAGTG	3 cut(s)	127, 145, 1590
BtuMI	TCGCGA	1 cut(s)	469
BveI	ACCTGC	1 cut(s)	1729
Cac8I	GCNNGC	6 cut(s)	867, 942, 1071, 1216, 1269, 1521
CaiI	CAGNNNCTG	2 cut(s)	144, 451
CciI	TCATGA	1 cut(s)	240
Cfr10I	RCCGGY	1 cut(s)	1832
Cfr13I	GGNCC	3 cut(s)	841, 1865, 1988
CseI	GACGC	1 cut(s)	875
Csp6I	GTAC	6 cut(s)	163, 224, 415, 1824, 1836, 1942
CspCI	CAANNNNNGTGG	2 cut(s)	1062, 1097
CviAII	CATG	7 cut(s)	241, 670, 980, 1472, 1570, 1642, 1752
CviQI	GTAC	6 cut(s)	163, 224, 415, 1824, 1836, 1942
DdeI	CTNAG	9 cut(s)	270, 756, 1047, 1064, 1095, 1121, 1272, 2023, 2029
DpnI	GATC	6 cut(s)	245, 399, 459, 587, 1147, 1696
DpnII	GATC	6 cut(s)	243, 397, 457, 585, 1145, 1694
DraI	TTTAAA	1 cut(s)	976
EaeI	YGGCCR	2 cut(s)	490, 1854
Eam1104I	CTCTTC	3 cut(s)	537, 1380, 1884
EarI	CTCTTC	3 cut(s)	537, 1380, 1884
Ecl136II	GAGCTC	1 cut(s)	329
Eco130I	CCWWGG	1 cut(s)	612
Eco147I	AGGCCT	1 cut(s)	1069
Eco24I	GRGCYC	1 cut(s)	331
Eco47I	GGWCC	2 cut(s)	841, 1865
Eco53kI	GAGCTC	1 cut(s)	329
Eco57I	CTGAAG	2 cut(s)	1329, 1398
Eco72I	CACGTG	1 cut(s)	1841
Eco88I	CYCGRG	2 cut(s)	581, 1827
EcoICRI	GAGCTC	1 cut(s)	329
EcoO109I	RGGNCCY	1 cut(s)	1988
EcoRII	CCWGG	1 cut(s)	249
EcoT14I	CCWWGG	1 cut(s)	612
EcoT22I	ATGCAT	1 cut(s)	28
EcoT38I	GRGCYC	1 cut(s)	331
ErhI	CCWWGG	1 cut(s)	612
FaeI	CATG	7 cut(s)	244, 673, 983, 1475, 1573, 1645, 1755
FatI	CATG	7 cut(s)	240, 669, 979, 1471, 1569, 1641, 1751
FauI	CCCGC	2 cut(s)	1223, 1312
FauNDI	CATATG	1 cut(s)	487
FbaI	TGATCA	1 cut(s)	243
FblI	GTMKAC	5 cut(s)	375, 571, 761, 1393, 1677
FokI	GGATG	5 cut(s)	110, 233, 366, 480, 1071
FriOI	GRGCYC	1 cut(s)	331
FspBI	CTAG	4 cut(s)	548, 818, 1698, 2056
GsaI	CCCAGC	2 cut(s)	726, 1730
GsuI	CTGGAG	3 cut(s)	315, 785, 1161
HaeIII	GGCC	4 cut(s)	492, 1069, 1856, 1989
HapII	CCGG	2 cut(s)	324, 1833
HgaI	GACGC	1 cut(s)	875
Hin1I	GRCGYC	1 cut(s)	738
Hin1II	CATG	7 cut(s)	244, 673, 983, 1475, 1573, 1645, 1755
HincII	GTYRAC	2 cut(s)	930, 1678
HindII	GTYRAC	2 cut(s)	930, 1678
HindIII	AAGCTT	2 cut(s)	89, 806
HinfI	GANTC	6 cut(s)	283, 335, 551, 916, 1769, 2027
HpaI	GTTAAC	1 cut(s)	930
HpaII	CCGG	2 cut(s)	324, 1833
HphI	GGTGA	5 cut(s)	980, 1293, 1394, 1415, 1441
Hpy166II	GTNNAC	9 cut(s)	376, 572, 687, 762, 830, 930, 1394, 1678, 1838
Hpy8I	GTNNAC	9 cut(s)	376, 572, 687, 762, 830, 930, 1394, 1678, 1838
Hpy99I	CGWCG	3 cut(s)	593, 1443, 1925
HpyCH4III	ACNGT	8 cut(s)	167, 912, 927, 1330, 1529, 1675, 1760, 1946
HpyCH4IV	ACGT	5 cut(s)	203, 738, 1362, 1441, 1840
HpyF10VI	GCNNNNNNNGC	8 cut(s)	129, 144, 446, 814, 1060, 1133, 1273, 1592
HpyF3I	CTNAG	9 cut(s)	270, 756, 1047, 1064, 1095, 1121, 1272, 2023, 2029
HpySE526I	ACGT	5 cut(s)	203, 738, 1362, 1441, 1840
Hsp92I	GRCGYC	1 cut(s)	738
Hsp92II	CATG	7 cut(s)	244, 673, 983, 1475, 1573, 1645, 1755
Ksp22I	TGATCA	1 cut(s)	243
KspAI	GTTAAC	1 cut(s)	930
Kzo9I	GATC	6 cut(s)	243, 397, 457, 585, 1145, 1694
LguI	GCTCTTC	1 cut(s)	537
LmnI	GCTCC	6 cut(s)	326, 334, 724, 1000, 1240, 1634
LweI	GCATC	5 cut(s)	113, 132, 394, 953, 1891
MaeI	CTAG	4 cut(s)	548, 818, 1698, 2056
MaeII	ACGT	5 cut(s)	203, 738, 1362, 1441, 1840
MaeIII	GTNAC	8 cut(s)	140, 209, 1403, 1411, 1429, 1705, 1716, 1754
MalI	GATC	6 cut(s)	245, 399, 459, 587, 1147, 1696
MbiI	CCGCTC	1 cut(s)	1692
MboI	GATC	6 cut(s)	243, 397, 457, 585, 1145, 1694
MfeI	CAATTG	2 cut(s)	1074, 1608
MflI	RGATCY	3 cut(s)	397, 457, 1694
MhlI	GDGCHC	2 cut(s)	331, 1465
MlsI	TGGCCA	1 cut(s)	492
MluNI	TGGCCA	1 cut(s)	492
MlyI	GAGTC	2 cut(s)	1763, 2021
Mox20I	TGGCCA	1 cut(s)	492
Mph1103I	ATGCAT	1 cut(s)	28
MscI	TGGCCA	1 cut(s)	492
MseI	TTAA	5 cut(s)	846, 929, 975, 1365, 1419
MslI	CAYNNNNRTG	2 cut(s)	498, 1188
Msp20I	TGGCCA	1 cut(s)	492
MspA1I	CMGCKG	2 cut(s)	1177, 1307
MspI	CCGG	2 cut(s)	324, 1833
MspR9I	CCNGG	2 cut(s)	251, 324
MunI	CAATTG	2 cut(s)	1074, 1608
MvaI	CCWGG	1 cut(s)	251
MvnI	CGCG	1 cut(s)	469
MwoI	GCNNNNNNNGC	8 cut(s)	129, 144, 446, 814, 1060, 1133, 1273, 1592
NciI	CCSGG	1 cut(s)	324
NdeI	CATATG	1 cut(s)	487
NdeII	GATC	6 cut(s)	243, 397, 457, 585, 1145, 1694
NlaIII	CATG	7 cut(s)	244, 673, 983, 1475, 1573, 1645, 1755
NlaIV	GGNNCC	5 cut(s)	72, 321, 720, 1035, 1462
NmuCI	GTSAC	4 cut(s)	140, 1403, 1411, 1429
NruI	TCGCGA	1 cut(s)	469
NsiI	ATGCAT	1 cut(s)	28
NspI	RCATGY	2 cut(s)	983, 1755
NspV	TTCGAA	1 cut(s)	191
PagI	TCATGA	1 cut(s)	240
PceI	AGGCCT	1 cut(s)	1069
PciI	ACATGT	2 cut(s)	979, 1751
PciSI	GCTCTTC	1 cut(s)	537
PcsI	WCGNNNNNNNCGW	1 cut(s)	1917
PfeI	GAWTC	4 cut(s)	283, 335, 551, 916
PflFI	GACNNNGTC	2 cut(s)	682, 1409
PleI	GAGTC	2 cut(s)	1763, 2021
PmaCI	CACGTG	1 cut(s)	1841
PmlI	CACGTG	1 cut(s)	1841
PpsI	GAGTC	2 cut(s)	1763, 2021
Ppu21I	YACGTR	1 cut(s)	1841
PscI	ACATGT	2 cut(s)	979, 1751
PshBI	ATTAAT	1 cut(s)	1419
Psp124BI	GAGCTC	1 cut(s)	331
Psp6I	CCWGG	1 cut(s)	249
PspCI	CACGTG	1 cut(s)	1841
PspFI	CCCAGC	2 cut(s)	722, 1726
PspGI	CCWGG	1 cut(s)	249
PspN4I	GGNNCC	5 cut(s)	72, 321, 720, 1035, 1462
PspPI	GGNCC	3 cut(s)	841, 1865, 1988
PstI	CTGCAG	1 cut(s)	1585
PstNI	CAGNNNCTG	2 cut(s)	144, 451
PsuI	RGATCY	3 cut(s)	397, 457, 1694
PsyI	GACNNNGTC	2 cut(s)	682, 1409
PvuII	CAGCTG	1 cut(s)	1177
RruI	TCGCGA	1 cut(s)	469
RsaI	GTAC	6 cut(s)	164, 225, 416, 1825, 1837, 1943
RsaNI	GTAC	6 cut(s)	163, 224, 415, 1824, 1836, 1942
RseI	CAYNNNNRTG	2 cut(s)	498, 1188
SacI	GAGCTC	1 cut(s)	331
SalI	GTCGAC	1 cut(s)	1676
SapI	GCTCTTC	1 cut(s)	537
SaqAI	TTAA	5 cut(s)	846, 929, 975, 1365, 1419
Sau3AI	GATC	6 cut(s)	243, 397, 457, 585, 1145, 1694
Sau96I	GGNCC	3 cut(s)	841, 1865, 1988
ScaI	AGTACT	2 cut(s)	225, 416
SchI	GAGTC	2 cut(s)	1763, 2021
ScrFI	CCNGG	2 cut(s)	251, 324
SduI	GDGCHC	2 cut(s)	331, 1465
SfaNI	GCATC	5 cut(s)	113, 132, 394, 953, 1891
SfcI	CTRYAG	1 cut(s)	1581
SfuI	TTCGAA	1 cut(s)	191
SinI	GGWCC	2 cut(s)	841, 1865
SmiMI	CAYNNNNRTG	2 cut(s)	498, 1188
SmlI	CTYRAG	1 cut(s)	1284
SmoI	CTYRAG	1 cut(s)	1284
SseBI	AGGCCT	1 cut(s)	1069
SsiI	CCGC	5 cut(s)	184, 1216, 1305, 1692, 1845
SspMI	CTAG	4 cut(s)	548, 818, 1698, 2056
SstI	GAGCTC	1 cut(s)	331
StuI	AGGCCT	1 cut(s)	1069
StyD4I	CCNGG	2 cut(s)	249, 322
StyI	CCWWGG	1 cut(s)	612
TaaI	ACNGT	8 cut(s)	167, 912, 927, 1330, 1529, 1675, 1760, 1946
TaiI	ACGT	5 cut(s)	206, 741, 1365, 1444, 1843
TaqI	TCGA	4 cut(s)	107, 191, 294, 1677
TaqII	GACCGA	1 cut(s)	1882
TatI	WGTACW	3 cut(s)	223, 414, 1941
TfiI	GAWTC	4 cut(s)	283, 335, 551, 916
Tru1I	TTAA	5 cut(s)	846, 929, 975, 1365, 1419
Tru9I	TTAA	5 cut(s)	846, 929, 975, 1365, 1419
TseFI	GTSAC	4 cut(s)	140, 1403, 1411, 1429
Tsp45I	GTSAC	4 cut(s)	140, 1403, 1411, 1429
TspDTI	ATGAA	7 cut(s)	495, 719, 733, 1034, 1558, 1658, 1977
Tth111I	GACNNNGTC	2 cut(s)	682, 1409
VpaK11BI	GGWCC	2 cut(s)	841, 1865
VspI	ATTAAT	1 cut(s)	1419
XapI	RAATTY	7 cut(s)	306, 539, 768, 835, 872, 1504, 1564
XbaI	TCTAGA	1 cut(s)	1697
XceI	RCATGY	2 cut(s)	983, 1755
XcmI	CCANNNNNNNNNTGG	3 cut(s)	58, 563, 730
XmiI	GTMKAC	5 cut(s)	375, 571, 761, 1393, 1677
XspI	CTAG	4 cut(s)	548, 818, 1698, 2056
ZraI	GACGTC	1 cut(s)	739
ZrmI	AGTACT	2 cut(s)	225, 416
Zsp2I	ATGCAT	1 cut(s)	28

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.