Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0012339

Physical Location & Seq

Genomic Coordinates Forward (+)

2933668 .. 2938815

Gene Structure 5148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00280370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGGCTGCTTCGGAGGAGAATAATGCGTTGTTTCCGATTTTTATCTTGACCATAATGGCACTGGCTCTAGTGCCTTACACGATAACAAAGTTGTGTCGTGCTGCGTCAAAGGAAACAAAGAGCATCCATTGTAAGTGCAGTGACTGCTGCCGTTCAGGAAAGTACCGTAGGTCATTGTTCAAGCGGATTTCAAACTTCTCAACATGCAGTAACTTGACAATAGTACTGCTTTGGGTTGTCATGATAGTCCTGGTTTATTACATCAAAACTCAGAGCGCAGAGAATCAAGTTTTCGACCCATTCCATATTCTTGGTCTGGAACCTGGAGCTCCAGATTCTGAAATAAAGAAGGCGTACAGAAGACTTTCTATACTATACCATCCAGATAAAAATCCAGATCCAGAGGCCAACAAGTACTTTGTGGAGAAAATAGCTAAGGCTTATCAGGCTCTGACAGATCCAGTATCTCGTGAAAATTATGAAAAGTATGGCCATCCAGATGGCAGACAGGGGTTTGAAATGGGCATAGCTCTTCCTCAATTCCTACTAGACACCCAAAAAAATGGTGGTATACTCTTGCTTGGGATCGTCGGTGTTTGTATTCTCTTGCCCTTGGTAATAGCTGTTGTATATCTCTCAAGGTCGGCAAAATATACTGGCAACTATGTCATGCACCAGACGTTGTCCACTTACTATTACTTTATGAAGCCTTCTCTGGCTCCCAGCAAAGTAATGGACGTCTTCATAAAGGCTGCCGAGTACACTGAAATTCCAGTTCGTAGAACTGACAACGAACCCCTCCAGAAGCTTTTTATGCTAGTTAGGAGTGAACTGAATTTGGACCTTAAGAACATCAAGCAAGAGCAGGCAAAATTTTGGAAGCAGCATCCAGCCCTTGTAAAGACTGAACTGTTGATTCAAGCGCAGTTAACTCGTGAGACAGCATCTTTATCTCCATCTCTGCAAGGTGATTTTAAACATGTTCTGGAACTTGCTCCTCGCCTCCTTGAAGAATTGATGAAGATGGCACTGGTTCCACGCAATGCTCAGGGGCAGGGATGGCTGAGGCCTGCAATTGGGGTAGTTGAACTTTCTCAGTGCATAATTCAGGCTGTTCCATTAAGTGCAAGGAAGGCTATTGGAGGATCAAGTGAAGGCATTGCCCCCTTTCTGCAGCTGCCACATTTCAGTGAGGCTGTTGTAAAAAAGATAGCCCGCAAGAAGCTGAGAGTGTTTCAGGAGCTTCGGGATATGTCTATGCAAGAGCGTGCTGAGTTGCTTTCTCAAGTTGCTGGTTTCTCGCCCACTGAAGTAGAAGATGTTGAAATGGTTTTAGCAGCAATGCCATCCATATCGCTTGACGTTAAGTGTGAGACTGAAGGTGAAGAGGGTATACAAGAGGGTGACATTGTCACTGTTCATGCTTGGGTGACACTACAACGCGATAATGGCCTGATTGGTGCCCTTCCCCATGCCCCCTACTTCCCGTTTCGCAAGGAGGAAAATTTCTGGTTTTTGCTTGCAGATAGTGTCTCCAATAATGTGTGGTTCTGGCAGAAGGTAAATTTCATGGAGGAAGCTGCAGCAATTACTGCTGCTTCCAAGGCAATTGAGGAGACAATGGAGGGTTCAGGAGCAAACATGAAGGAGATTAGTGCTGCTATCAAAGAAGCAGTTGACAAGGTGAAGAGTGGATCTAGATTGGTAACGGGCAAGTTACCTGCCCCAGCAGAGGGGAATTACAATTTGACATGCTACTGTCTGTGCGACTCTTGGCTTGGTTGTGATAGACGGACAAACTTGAAGGTAAAGGTTTTGAAGCGTACCCGAGCTGGTACACGTGGCGGTTTTGTGGCCGAAGATGGACCGATTACAGAGGACGGGATTGAAGAGGAGGAAGATGTTGATGACGAGGAATATGATGAGGATTATGAGAGTGAGTACAGCGAAGATGAGGCGGATGAACAACAGGATACAAAACAGAAAGGCCCTGCTGCAAATGGCAACGCTCATACACAAGGCACGGAAGGTTCAGGTTCAGAGGAGGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001655 GO:0001889 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006620 GO:0006807 GO:0006810 GO:0006886 GO:0007275 GO:0007568 GO:0008104 GO:0008150 GO:0008152 GO:0010259 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034613 GO:0042175 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045047 GO:0045184 GO:0046907 GO:0048513 GO:0048731 GO:0048732 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061008 GO:0070727 GO:0070972 GO:0071702 GO:0071705 GO:0071944 GO:0072001 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko03060 ko04141 map03060 map04141

Pfam Domains

Protein Families

DnaJ Sec63

Protein Analysis

683

Amino Acids

76.29

Weight (kDa)

5.33

Isoelectric Point (pI)

47.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	99 - 161	7.1e-20	DnaJ domain
Sec63	PF02889	221 - 601	6.5e-24	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79940 AT1G79940 AT1G79940 AT1G79940
fragaria_vesca	FvH4_7g30440 FvH4_7g30440
malus_domestica	MD01G1210000.v1.1 MD07G1280100.v1.1
prunus_persica	Prupe.2G302300_v2.0.a1
pyrus_communis	pycom01g22050
rosa_chinensis	RchiOBHm_Chr1g0378591
rosa_laevigata	RLG00000026420
rosa_multiflora	Rmu_sc0002395.1_g000009
rosa_roxburghii	Rroxscaffold_4G00280370
rosa_rugosa	Rorug01G0409800
rosa_samantha	Rh1AG431300 Rh1BG389600 Rh1DG420800
rosa_wichuraiana	Rw1G037780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	741
Acc36I	ACCTGC	1 cut(s)	1729
AccB1I	GGYRCC	1 cut(s)	1460
AccI	GTMKAC	2 cut(s)	571, 1393
AccII	CGCG	1 cut(s)	1443
AciI	CCGC	4 cut(s)	184, 1216, 1845, 1958
AclWI	GGATC	5 cut(s)	392, 452, 593, 1153, 1702
AcoI	YGGCCR	2 cut(s)	490, 1854
AcsI	RAATTY	5 cut(s)	768, 835, 872, 1504, 1564
AcuI	CTGAAG	2 cut(s)	1329, 1398
AcvI	CACGTG	1 cut(s)	1841
AcyI	GRCGYC	1 cut(s)	738
AfaI	GTAC	8 cut(s)	164, 225, 356, 416, 761, 1825, 1837, 1943
AfiI	CCNNNNNNNGG	3 cut(s)	1076, 1732, 1733
AflII	CTTAAG	1 cut(s)	845
AflIII	ACRYGT	2 cut(s)	979, 1838
AjnI	CCWGG	2 cut(s)	249, 322
Alw21I	GWGCWC	1 cut(s)	331
Alw26I	GTCTC	4 cut(s)	932, 1367, 1537, 1610
AlwI	GGATC	5 cut(s)	392, 452, 593, 1153, 1702
AlwNI	CAGNNNCTG	3 cut(s)	144, 338, 451
Ama87I	CYCGRG	1 cut(s)	1827
AoxI	GGCC	6 cut(s)	405, 490, 1067, 1450, 1854, 1987
ApoI	RAATTY	5 cut(s)	768, 835, 872, 1504, 1564
Asp700I	GAANNNNTTC	1 cut(s)	364
AspLEI	GCGC	2 cut(s)	278, 925
AspS9I	GGNCC	3 cut(s)	841, 1865, 1988
AsuHPI	GGTGA	5 cut(s)	980, 1394, 1415, 1441, 1696
AvaI	CYCGRG	1 cut(s)	1827
AvaII	GGWCC	2 cut(s)	841, 1865
BaeGI	GKGCMC	1 cut(s)	1465
BalI	TGGCCA	1 cut(s)	492
BanI	GGYRCC	1 cut(s)	1460
BanII	GRGCYC	1 cut(s)	331
BarI	GAAGNNNNNNTAC	2 cut(s)	1377, 1409
BauI	CACGAG	2 cut(s)	468, 933
BbrPI	CACGTG	1 cut(s)	1841
BbsI	GAAGAC	2 cut(s)	367, 733
Bbv12I	GWGCWC	1 cut(s)	331
BbvCI	CCTCAGC	1 cut(s)	1064
BccI	CCATC	8 cut(s)	387, 494, 501, 964, 1018, 1053, 1354, 1856
BceAI	ACGGC	1 cut(s)	135
BcgI	CGANNNNNNTGC	2 cut(s)	914, 948
BciT130I	CCWGG	2 cut(s)	251, 324
BciVI	GTATCC	1 cut(s)	1966
BcoDI	GTCTC	4 cut(s)	932, 1367, 1537, 1610
BfaI	CTAG	4 cut(s)	68, 548, 818, 1698
BfmI	CTRYAG	2 cut(s)	1172, 1581
BfrI	CTTAAG	1 cut(s)	845
BfuAI	ACCTGC	1 cut(s)	1729
BfuI	GTATCC	1 cut(s)	1966
BmcAI	AGTACT	2 cut(s)	225, 416
Bme1390I	CCNGG	2 cut(s)	251, 324
Bme18I	GGWCC	2 cut(s)	841, 1865
BmeT110I	CYCGRG	1 cut(s)	1827
BmgT120I	GGNCC	3 cut(s)	841, 1865, 1988
BmiI	GGNNCC	4 cut(s)	321, 720, 1035, 1462
BmrFI	CCNGG	2 cut(s)	251, 324
BmsI	GCATC	3 cut(s)	132, 895, 953
BpiI	GAAGAC	2 cut(s)	367, 733
BpmI	CTGGAG	3 cut(s)	315, 345, 785
Bpu10I	CCTNAGC	3 cut(s)	435, 1047, 1064
BpuEI	CTTGAG	2 cut(s)	622, 1269
BsaAI	YACGTR	1 cut(s)	1841
BsaBI	GATNNNNATC	2 cut(s)	41, 390
BsaHI	GRCGYC	1 cut(s)	738
BsaJI	CCNNGG	2 cut(s)	612, 1602
Bsc4I	CCNNNNNNNGG	3 cut(s)	1076, 1732, 1733
Bse1I	ACTGG	5 cut(s)	66, 461, 661, 773, 1035
Bse3DI	GCAATG	3 cut(s)	1048, 1158, 1347
Bse8I	GATNNNNATC	2 cut(s)	41, 390
BseBI	CCWGG	2 cut(s)	251, 324
BseDI	CCNNGG	2 cut(s)	612, 1602
BseGI	GGATG	7 cut(s)	123, 379, 493, 886, 1064, 1346, 1966
BseJI	GATNNNNATC	2 cut(s)	41, 390
BseLI	CCNNNNNNNGG	3 cut(s)	1076, 1732, 1733
BseMI	GCAATG	3 cut(s)	1048, 1158, 1347
BseMII	CTCAG	6 cut(s)	284, 1055, 1061, 1109, 1217, 1263
BseNI	ACTGG	5 cut(s)	66, 461, 661, 773, 1035
BseRI	GAGGAG	4 cut(s)	29, 987, 1628, 1907
BseSI	GKGCMC	1 cut(s)	1465
BseYI	CCCAGC	2 cut(s)	722, 1726
BsgI	GTGCAG	1 cut(s)	157
Bsh1236I	CGCG	1 cut(s)	1443
BshFI	GGCC	6 cut(s)	407, 492, 1069, 1452, 1856, 1989
BshNI	GGYRCC	1 cut(s)	1460
BsiHKAI	GWGCWC	1 cut(s)	331
BsiHKCI	CYCGRG	1 cut(s)	1827
BslI	CCNNNNNNNGG	3 cut(s)	1076, 1732, 1733
BsmAI	GTCTC	4 cut(s)	932, 1367, 1537, 1610
BsnI	GGCC	6 cut(s)	407, 492, 1069, 1452, 1856, 1989
BsoBI	CYCGRG	1 cut(s)	1827
Bsp1286I	GDGCHC	2 cut(s)	331, 1465
Bsp143I	GATC	5 cut(s)	397, 457, 585, 1145, 1694
BspACI	CCGC	4 cut(s)	184, 1216, 1845, 1958
BspANI	GGCC	6 cut(s)	407, 492, 1069, 1452, 1856, 1989
BspCNI	CTCAG	6 cut(s)	283, 1056, 1060, 1108, 1218, 1264
BspFNI	CGCG	1 cut(s)	1443
BspHI	TCATGA	1 cut(s)	240
BspLI	GGNNCC	4 cut(s)	321, 720, 1035, 1462
BspMAI	CTGCAG	2 cut(s)	1176, 1585
BspMI	ACCTGC	1 cut(s)	1729
BspPI	GGATC	5 cut(s)	392, 452, 593, 1153, 1702
BspQI	GCTCTTC	1 cut(s)	537
BspT107I	GGYRCC	1 cut(s)	1460
BspTI	CTTAAG	1 cut(s)	845
BsrDI	GCAATG	3 cut(s)	1048, 1158, 1347
BsrI	ACTGG	5 cut(s)	66, 461, 661, 773, 1035
BssECI	CCNNGG	2 cut(s)	612, 1602
BssMI	GATC	5 cut(s)	397, 457, 585, 1145, 1694
BssNAI	GTATAC	2 cut(s)	572, 1394
BssNI	GRCGYC	1 cut(s)	738
BssSI	CACGAG	2 cut(s)	468, 933
BssT1I	CCWWGG	2 cut(s)	612, 1602
Bst1107I	GTATAC	2 cut(s)	572, 1394
Bst2BI	CACGAG	2 cut(s)	468, 933
Bst2UI	CCWGG	2 cut(s)	251, 324
Bst4CI	ACNGT	4 cut(s)	167, 912, 1417, 1760
Bst6I	CTCTTC	4 cut(s)	537, 1380, 1682, 1884
BstACI	GRCGYC	1 cut(s)	738
BstAFI	CTTAAG	1 cut(s)	845
BstAPI	GCANNNNNTGC	2 cut(s)	144, 1592
BstBAI	YACGTR	1 cut(s)	1841
BstC8I	GCNNGC	5 cut(s)	867, 1071, 1216, 1269, 1521
BstDEI	CTNAG	7 cut(s)	270, 435, 1047, 1064, 1095, 1226, 1272
BstF5I	GGATG	7 cut(s)	123, 379, 493, 886, 1064, 1346, 1966
BstFNI	CGCG	1 cut(s)	1443
BstHHI	GCGC	2 cut(s)	278, 925
BstKTI	GATC	5 cut(s)	400, 460, 588, 1148, 1697
BstMAI	GTCTC	4 cut(s)	932, 1367, 1537, 1610
BstMBI	GATC	5 cut(s)	397, 457, 585, 1145, 1694
BstMWI	GCNNNNNNNGC	8 cut(s)	144, 446, 814, 1060, 1133, 1449, 1592, 1604
BstNI	CCWGG	2 cut(s)	251, 324
BstNSI	RCATGY	3 cut(s)	207, 983, 1755
BstSCI	CCNGG	2 cut(s)	249, 322
BstSFI	CTRYAG	2 cut(s)	1172, 1581
BstSLI	GKGCMC	1 cut(s)	1465
BstUI	CGCG	1 cut(s)	1443
BstV2I	GAAGAC	2 cut(s)	367, 733
BstX2I	RGATCY	3 cut(s)	397, 457, 1694
BstXI	CCANNNNNNTGG	3 cut(s)	311, 500, 563
BstYI	RGATCY	3 cut(s)	397, 457, 1694
BstZ17I	GTATAC	2 cut(s)	572, 1394
BsuI	GTATCC	1 cut(s)	1966
BsuRI	GGCC	6 cut(s)	407, 492, 1069, 1452, 1856, 1989
BtsCI	GGATG	7 cut(s)	123, 379, 493, 886, 1064, 1346, 1966
BtsI	GCAGTG	1 cut(s)	145
BtsIMutI	CAGTG	8 cut(s)	59, 145, 762, 1028, 1103, 1195, 1305, 1413
BveI	ACCTGC	1 cut(s)	1729
Cac8I	GCNNGC	5 cut(s)	867, 1071, 1216, 1269, 1521
CaiI	CAGNNNCTG	3 cut(s)	144, 338, 451
CciI	TCATGA	1 cut(s)	240
CfoI	GCGC	2 cut(s)	278, 925
Cfr13I	GGNCC	3 cut(s)	841, 1865, 1988
CseI	GACGC	1 cut(s)	93
Csp6I	GTAC	8 cut(s)	163, 224, 355, 415, 760, 1824, 1836, 1942
CviAII	CATG	9 cut(s)	204, 241, 670, 980, 1421, 1472, 1570, 1642, 1752
CviQI	GTAC	8 cut(s)	163, 224, 355, 415, 760, 1824, 1836, 1942
DdeI	CTNAG	7 cut(s)	270, 435, 1047, 1064, 1095, 1226, 1272
DpnI	GATC	5 cut(s)	399, 459, 587, 1147, 1696
DpnII	GATC	5 cut(s)	397, 457, 585, 1145, 1694
DraI	TTTAAA	1 cut(s)	976
EaeI	YGGCCR	2 cut(s)	490, 1854
Eam1104I	CTCTTC	4 cut(s)	537, 1380, 1682, 1884
EarI	CTCTTC	4 cut(s)	537, 1380, 1682, 1884
EciI	GGCGGA	1 cut(s)	1973
Ecl136II	GAGCTC	1 cut(s)	329
Eco130I	CCWWGG	2 cut(s)	612, 1602
Eco147I	AGGCCT	1 cut(s)	1069
Eco24I	GRGCYC	1 cut(s)	331
Eco47I	GGWCC	2 cut(s)	841, 1865
Eco53kI	GAGCTC	1 cut(s)	329
Eco57I	CTGAAG	2 cut(s)	1329, 1398
Eco72I	CACGTG	1 cut(s)	1841
Eco88I	CYCGRG	1 cut(s)	1827
EcoICRI	GAGCTC	1 cut(s)	329
EcoO109I	RGGNCCY	1 cut(s)	1988
EcoRII	CCWGG	2 cut(s)	249, 322
EcoT14I	CCWWGG	2 cut(s)	612, 1602
EcoT38I	GRGCYC	1 cut(s)	331
ErhI	CCWWGG	2 cut(s)	612, 1602
FaeI	CATG	9 cut(s)	207, 244, 673, 983, 1424, 1475, 1573, 1645, 1755
FatI	CATG	9 cut(s)	203, 240, 669, 979, 1420, 1471, 1569, 1641, 1751
FauI	CCCGC	1 cut(s)	1223
FblI	GTMKAC	2 cut(s)	571, 1393
FokI	GGATG	7 cut(s)	110, 366, 480, 873, 1071, 1333, 1973
FriOI	GRGCYC	1 cut(s)	331
FspBI	CTAG	4 cut(s)	68, 548, 818, 1698
GlaI	GCGC	2 cut(s)	277, 924
GsaI	CCCAGC	2 cut(s)	726, 1730
GsuI	CTGGAG	3 cut(s)	315, 345, 785
HaeIII	GGCC	6 cut(s)	407, 492, 1069, 1452, 1856, 1989
HgaI	GACGC	1 cut(s)	93
HhaI	GCGC	2 cut(s)	278, 925
Hin1I	GRCGYC	1 cut(s)	738
Hin1II	CATG	9 cut(s)	207, 244, 673, 983, 1424, 1475, 1573, 1645, 1755
Hin6I	GCGC	2 cut(s)	276, 923
HinP1I	GCGC	2 cut(s)	276, 923
HincII	GTYRAC	2 cut(s)	930, 1678
HindII	GTYRAC	2 cut(s)	930, 1678
HindIII	AAGCTT	1 cut(s)	806
HinfI	GANTC	4 cut(s)	283, 335, 916, 1769
HpaI	GTTAAC	1 cut(s)	930
HphI	GGTGA	5 cut(s)	980, 1394, 1415, 1441, 1696
Hpy166II	GTNNAC	8 cut(s)	572, 687, 762, 830, 930, 1394, 1678, 1838
Hpy188I	TCNGA	6 cut(s)	13, 36, 273, 340, 453, 2041
Hpy8I	GTNNAC	8 cut(s)	572, 687, 762, 830, 930, 1394, 1678, 1838
Hpy99I	CGWCG	1 cut(s)	593
HpyCH4III	ACNGT	4 cut(s)	167, 912, 1417, 1760
HpyCH4IV	ACGT	4 cut(s)	680, 738, 1362, 1840
HpyF10VI	GCNNNNNNNGC	8 cut(s)	144, 446, 814, 1060, 1133, 1449, 1592, 1604
HpyF3I	CTNAG	7 cut(s)	270, 435, 1047, 1064, 1095, 1226, 1272
HpySE526I	ACGT	4 cut(s)	680, 738, 1362, 1840
Hsp92I	GRCGYC	1 cut(s)	738
Hsp92II	CATG	9 cut(s)	207, 244, 673, 983, 1424, 1475, 1573, 1645, 1755
HspAI	GCGC	2 cut(s)	276, 923
KspAI	GTTAAC	1 cut(s)	930
Kzo9I	GATC	5 cut(s)	397, 457, 585, 1145, 1694
LguI	GCTCTTC	1 cut(s)	537
LmnI	GCTCC	6 cut(s)	326, 334, 724, 1000, 1240, 1634
LweI	GCATC	3 cut(s)	132, 895, 953
MaeI	CTAG	4 cut(s)	68, 548, 818, 1698
MaeII	ACGT	4 cut(s)	680, 738, 1362, 1840
MaeIII	GTNAC	7 cut(s)	140, 209, 1403, 1411, 1429, 1705, 1716
MalI	GATC	5 cut(s)	399, 459, 587, 1147, 1696
MboI	GATC	5 cut(s)	397, 457, 585, 1145, 1694
MfeI	CAATTG	2 cut(s)	1074, 1608
MflI	RGATCY	3 cut(s)	397, 457, 1694
MhlI	GDGCHC	2 cut(s)	331, 1465
MlsI	TGGCCA	1 cut(s)	492
MluNI	TGGCCA	1 cut(s)	492
MlyI	GAGTC	1 cut(s)	1763
Mox20I	TGGCCA	1 cut(s)	492
MroXI	GAANNNNTTC	1 cut(s)	364
MscI	TGGCCA	1 cut(s)	492
MseI	TTAA	5 cut(s)	846, 929, 975, 1121, 1365
MslI	CAYNNNNRTG	2 cut(s)	498, 1188
Msp20I	TGGCCA	1 cut(s)	492
MspA1I	CMGCKG	1 cut(s)	1177
MspCI	CTTAAG	1 cut(s)	845
MspR9I	CCNGG	2 cut(s)	251, 324
MunI	CAATTG	2 cut(s)	1074, 1608
MvaI	CCWGG	2 cut(s)	251, 324
MvnI	CGCG	1 cut(s)	1443
MwoI	GCNNNNNNNGC	8 cut(s)	144, 446, 814, 1060, 1133, 1449, 1592, 1604
NdeII	GATC	5 cut(s)	397, 457, 585, 1145, 1694
NlaIII	CATG	9 cut(s)	207, 244, 673, 983, 1424, 1475, 1573, 1645, 1755
NlaIV	GGNNCC	4 cut(s)	321, 720, 1035, 1462
NmeAIII	GCCGAG	1 cut(s)	781
NmuCI	GTSAC	4 cut(s)	140, 1403, 1411, 1429
NspI	RCATGY	3 cut(s)	207, 983, 1755
PagI	TCATGA	1 cut(s)	240
PceI	AGGCCT	1 cut(s)	1069
PciI	ACATGT	1 cut(s)	979
PciSI	GCTCTTC	1 cut(s)	537
PdmI	GAANNNNTTC	1 cut(s)	364
PfeI	GAWTC	3 cut(s)	283, 335, 916
PflFI	GACNNNGTC	2 cut(s)	682, 1409
PleI	GAGTC	1 cut(s)	1763
PmaCI	CACGTG	1 cut(s)	1841
PmlI	CACGTG	1 cut(s)	1841
PpsI	GAGTC	1 cut(s)	1763
Ppu21I	YACGTR	1 cut(s)	1841
PscI	ACATGT	1 cut(s)	979
Psp124BI	GAGCTC	1 cut(s)	331
Psp6I	CCWGG	2 cut(s)	249, 322
PspCI	CACGTG	1 cut(s)	1841
PspFI	CCCAGC	2 cut(s)	722, 1726
PspGI	CCWGG	2 cut(s)	249, 322
PspN4I	GGNNCC	4 cut(s)	321, 720, 1035, 1462
PspPI	GGNCC	3 cut(s)	841, 1865, 1988
PstI	CTGCAG	2 cut(s)	1176, 1585
PstNI	CAGNNNCTG	3 cut(s)	144, 338, 451
PsuI	RGATCY	3 cut(s)	397, 457, 1694
PsyI	GACNNNGTC	2 cut(s)	682, 1409
PvuII	CAGCTG	1 cut(s)	1177
RsaI	GTAC	8 cut(s)	164, 225, 356, 416, 761, 1825, 1837, 1943
RsaNI	GTAC	8 cut(s)	163, 224, 355, 415, 760, 1824, 1836, 1942
RseI	CAYNNNNRTG	2 cut(s)	498, 1188
SacI	GAGCTC	1 cut(s)	331
SapI	GCTCTTC	1 cut(s)	537
SaqAI	TTAA	5 cut(s)	846, 929, 975, 1121, 1365
Sau3AI	GATC	5 cut(s)	397, 457, 585, 1145, 1694
Sau96I	GGNCC	3 cut(s)	841, 1865, 1988
ScaI	AGTACT	2 cut(s)	225, 416
SchI	GAGTC	1 cut(s)	1763
ScrFI	CCNGG	2 cut(s)	251, 324
SduI	GDGCHC	2 cut(s)	331, 1465
SfaNI	GCATC	3 cut(s)	132, 895, 953
SfcI	CTRYAG	2 cut(s)	1172, 1581
SinI	GGWCC	2 cut(s)	841, 1865
SmiMI	CAYNNNNRTG	2 cut(s)	498, 1188
SmlI	CTYRAG	3 cut(s)	637, 845, 1284
SmoI	CTYRAG	3 cut(s)	637, 845, 1284
SseBI	AGGCCT	1 cut(s)	1069
SsiI	CCGC	4 cut(s)	184, 1216, 1845, 1958
SspMI	CTAG	4 cut(s)	68, 548, 818, 1698
SstI	GAGCTC	1 cut(s)	331
StuI	AGGCCT	1 cut(s)	1069
StyD4I	CCNGG	2 cut(s)	249, 322
StyI	CCWWGG	2 cut(s)	612, 1602
TaaI	ACNGT	4 cut(s)	167, 912, 1417, 1760
TaiI	ACGT	4 cut(s)	683, 741, 1365, 1843
TaqI	TCGA	1 cut(s)	294
TaqII	GACCGA	1 cut(s)	1882
TatI	WGTACW	4 cut(s)	223, 414, 759, 1941
TfiI	GAWTC	3 cut(s)	283, 335, 916
Tru1I	TTAA	5 cut(s)	846, 929, 975, 1121, 1365
Tru9I	TTAA	5 cut(s)	846, 929, 975, 1121, 1365
TscAI	CASTG	8 cut(s)	66, 145, 769, 1035, 1103, 1195, 1312, 1420
TseFI	GTSAC	4 cut(s)	140, 1403, 1411, 1429
Tsp45I	GTSAC	4 cut(s)	140, 1403, 1411, 1429
TspDTI	ATGAA	8 cut(s)	495, 719, 733, 1034, 1409, 1558, 1658, 1977
TspGWI	ACGGA	2 cut(s)	1807, 2039
TspRI	CASTG	8 cut(s)	66, 145, 769, 1035, 1103, 1195, 1312, 1420
Tth111I	GACNNNGTC	2 cut(s)	682, 1409
Vha464I	CTTAAG	1 cut(s)	845
VpaK11BI	GGWCC	2 cut(s)	841, 1865
XapI	RAATTY	5 cut(s)	768, 835, 872, 1504, 1564
XbaI	TCTAGA	1 cut(s)	1697
XceI	RCATGY	3 cut(s)	207, 983, 1755
XcmI	CCANNNNNNNNNTGG	3 cut(s)	58, 563, 730
XmiI	GTMKAC	2 cut(s)	571, 1393
XmnI	GAANNNNTTC	1 cut(s)	364
XspI	CTAG	4 cut(s)	68, 548, 818, 1698
ZraI	GACGTC	1 cut(s)	739
ZrmI	AGTACT	2 cut(s)	225, 416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.