Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0010259

Physical Location & Seq

Genomic Coordinates Forward (+)

4742168 .. 4754594

Gene Structure 12427 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1028900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3453 bp

ATGTTCTCCGGCACCACCTCCAGCTCAAGGTCTCAAAGGTCCTCCATTTCGCCTTTTCGCTCCCGGAAGTCCTCCGGACCCACCAAGCCTCCTACGGCCTCGCCTCGCCCTGCCACCCCTTCTTCCTCCACGACGTCTTCTCGGCATCCCACTTCCAAGCCCTCTCTGTCTCCAGCCTCCTCCTCCGCCAGCCCAAACCCGCCGTCCCTGCCGTCCCCGCCCGATGTCTCCAAGTCCAAGGAGAATGTCACCGTCACTGTCCGCTTTCGTCCCCTCAGTGCTCGGGAGATTAACAAAGGGGACGAAATAGCGTGGTATGCTGATGGCGATTATACAGTCAGGAACGAGTCCAATTCCTCCATTGCTTACGGTTTCGATAAGGTTTTTGGTCCAGCAACGACGACACGCCATGTCTATGATGTCGCCGCACAGCACGTTGTTAGTGGTGTTATGCAAGGGATTAATGGTACTGTGTTTGCATATGGGGTTACTAGTAGTGGGAAAACACATACAATGCATGGGGAGCAAAAGTCACCTGGAATTATTCCACTGGCAGTGAAGGATGTTTTTGGAATTATACAGGAGACACCTGGGCGGGAGTTTCTTCTTCGTGTTTCATATCTGGAAATATACAATGAGGTCATAAATGACTTACTTGATCCAACAGGACAGAACCTACGAATAAGAGAGGATGCTCAGGGAACTTATGTTGAAGCAATCAAAGAGGAAGTTGTATTATCTCCTGCTCATGCTCTTTCCTTGATAGCAACAGGAGAAGAGCATAGGCATGTTGGTTCTAATAATTTCAATCTGCTTAGCAGTCGCAGCCACACTATATTCACACTGACTATTGAAAGCAGTCCACATGGTGAAAATCATGATGAAGAAGATGTCACCTTGTCCCAGTTGCACTTAATTGATCTTGCAGGATCTGAGAGTTCTAAAACTGAAACAACTGGATTGCGAAGAAGGGAGGGTTCATACATCAATAAAAGCTTACTTACGCTTGGCACTGTGATTTCTAAATTGACAGATGGAAAGGCAACTCATGTTCCATATCGAGATTCAAAACTCACCCGTTTATTGCAGTCATCCCTAAGCGGTCATGGGCGTGTATCTCTTATTTGCACCGTGACTCCTGCATCAAGCAATAGTGAGGAGACACACAACACACTGAAGTTTGCACACCGGAGCAAGCATGTGGAACTCAAGGCTTCCCAAAATAAGATTGTGGATGAAAAGTCTCTTATAAAGAAGTATCAGAAAGAAATTTCCAGTTTAAAGCAAGAACTTCAGCAATTAAGACGTGGGATGATGGAGAATCCAAATATGACTCCAACTGCTCAGGAAGACCTAGTTAATTTGAAGCTTCAGCTGGAAGCTGGTCAGGTAAAGTTGAGGTCAAGATTGGAAGAGGAAGAAGAAGCCAAGGCAGCTTTAATGGGAAGGATACAACGATTGACTAAACTAATCTTAGTTTCCACGAAAAATACTATCCCGCCAAGCATATCTGAACGACCTAGCCATAGGCGGAGACATTCTTTTGGGGAAGATGAGCTTGCATATCTGCCTGACAAGAAACGGGAATACCTTGTTGATGATGATACTGGAAGTTATGCGTCTGAGATTTCAGTGGAAGGAAGAGATGAGATCACTAATCTAGATGAGTTGGTCAAAGATTACAAAAGAAACAAAAAGCGTGGAATGCTAGGATGGTTTAAATTGAAAAAACCTGAGAATTTTGTTGGATTATCATCGAGCGGCGATAGTGAGAGCTCTACAAGTGGGTCACCAGCAGCTTGTTCAATATCTTCTCAAAATAGAGTCAAATTTAGTGATATGAAGGATGGACGAAGAAATTCTGTCAGTAGAAAGGGAGATGATTATACCATTATTGACCCATTTCCGGAAAGAACCCAAGCAGGTGATTTGTTTGGTGCAGGTTGCCGTTTGCCTCGGACTGGGTCCACAATTACAGATCAAATCGAACTTCTTCATGAGCAAGTGAAAATGTTAGCTGGGGAGGTGGCATTGTGTACAAGTTCTCTCAAAAGACTTTCAGAGCAAGCGCCTACAAACCCTGAAGATTCACAGCTTAAGGAACAAATGCAAAAGTTGAAGGAGGAAATTAGTGAAAAGAAGCTTCAGATATGTGTTCTAGAGCAACGCATGATTGGATCACTCGAGAGGTCTCCACAAATGTCAAATAACATTGAAATGTCTCAGGCTCTGTCCAAGCTTACTACACAGCTAAATGAGAAAACTTTTGAACTTGAGATTAAGTCAGCTGACAATAGGATACTTCAGGAACAACTACAGATTAAGATTTCTGAGAATGCAGAAATGCAAGAGACGATTCTTCTGCTAAGACAACAGCTCAGTTCACAACAAATTCCTGATAGTGAGGCTACCAGACTCGAAACATATCCCAAAGAGCTAGTGCAAAAGAACAATGAAAAGAGGGATAGGTTTGGTCTGTGTCAAGAAACTTGTGCTGATGAAAATACACCGACCAGTGTGATGAGCTTAAACAAAATCTTTTCCCTCGATTACTCCAAAGACTGCAACAAAGATGCATATCTGAATTCCCAAATCCATGTACAGGCTTCTGAAATAGAGGACTTAAAGCAAGATAAGGTGAGACTGTCTGAGGAAAAGGAGGGGCTTGAAGTTCAGAATATGAAACTTTCAGAAGAAGCTTCATATGCCAAAGAGTTGGCCGCAGCTGCAGCAGTTGAGCTTAGAAACTTGGCTCAAGAAGTAACCAAACTTTCTTATGAAAATGCAAAGCTGACTGGTGACCTCGCTGCTGCAAAGGAGGTTCAGTGCCGATCAAATTGTCAGAGGTCTACTTCATATGATTTCAAGAGAAATGGCTTAAATGGTCCTCGAGGCCATAAAGGGCCAGAGGATGTAGTTTTTGTTGAGGAGCTGCAGAGGGAACTTAGTGCAAGATGCCAAAGAGAAGCTTCTCTGGAGAAAGAACTATCCAAGAGAGATCAGACAGAAGATGATTTGCAAAGAACGTTAGATAAAGTAAAACAACGTGAAGTTGATTTAGAAAATGAGCTGGCAAACATGTGGGTGCTGGTTGCACAATTGAGAAAGTCTGGCATTAATTCCGAGGATGTGTCACTCGATGGGGTTCATCTATCTGAAAGTTCACGTGCAAGAGTCAAAAATGCGTTTCTTCCAAGTAATGGTCATTCAGATGTTATTTTCAAAGACGATGGAATCCGTGAAAACCTAAATGAGATGGGTACATTAGAAGATTTAAGAACCAGCTATCAGAAAGAAAGGAGAAGATGCAAAGAGTTAGAATGCTATATCTCTAGACTTAAGGGTGAAGATCTTGCTGGTCTTGATGTCACTACTCTTGAAGAACTGCAGAACCTTCATGTTGAGGCTATAACAAAGATTTGCCACGCGAAGTGTGCAAATCGTGTAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0035371 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0071944 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1151

Amino Acids

128.36

Weight (kDa)

6.25

Isoelectric Point (pI)

53.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	81 - 219	5.9e-20	Microtubule binding
Kinesin	PF00225	88 - 401	3e-104	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010259)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21730
fragaria_vesca	FvH4_2g27380 FvH4_2g27380 FvH4_2g27380
malus_domestica	MD00G1028900.v1.1
prunus_persica	Prupe.1G493400_v2.0.a1 Prupe.1G493400_v2.0.a1
pyrus_communis	pycom08g13740
rosa_chinensis	RchiOBHm_Chr6g0296241
rosa_laevigata	RLG00000011714
rosa_multiflora	Rmu_sc0000562.1_g000002 Rmu_sc0004708.1_g000012
rosa_roxburghii	Rroxscaffold_7G00171710 Rroxscaffold_7G00178350
rosa_rugosa	Rorug06G0259900.1 Rorug06G0260000
rosa_samantha	Rh6AG372000 Rh6BG379900 Rh6CG385300 Rh6DG372500
rosa_wichuraiana	Rw6G032420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1250
AarI	CACCTGC	1 cut(s)	1913
AatII	GACGTC	1 cut(s)	137
AbsI	CCTCGAGG	1 cut(s)	2889
Acc36I	ACCTGC	2 cut(s)	1913, 1931
AccB1I	GGYRCC	1 cut(s)	11
AccB7I	CCANNNNNTGG	1 cut(s)	3200
AccBSI	CCGCTC	1 cut(s)	1761
AccI	GTMKAC	1 cut(s)	2849
AccII	CGCG	1 cut(s)	3428
AccIII	TCCGGA	2 cut(s)	74, 1906
AclI	AACGTT	1 cut(s)	3026
AclWI	GGATC	3 cut(s)	653, 937, 2185
AcoI	YGGCCR	1 cut(s)	2718
AcsI	RAATTY	6 cut(s)	1269, 1738, 1829, 1858, 2391, 2584
AcuI	CTGAAG	6 cut(s)	1196, 1277, 1355, 2103, 2129, 2288
AcvI	CACGTG	1 cut(s)	3167
AcyI	GRCGYC	1 cut(s)	134
AdeI	CACNNNGTG	1 cut(s)	869
AfaI	GTAC	4 cut(s)	469, 2038, 2601, 3262
AfiI	CCNNNNNNNGG	5 cut(s)	27, 1906, 1961, 2602, 3200
AflII	CTTAAG	2 cut(s)	2096, 3338
AflIII	ACRYGT	1 cut(s)	3078
AhlI	ACTAGT	1 cut(s)	491
AjiI	CACGTC	1 cut(s)	1307
AjnI	CCWGG	2 cut(s)	535, 589
Alw21I	GWGCWC	2 cut(s)	283, 1778
AlwI	GGATC	3 cut(s)	653, 937, 2185
AlwNI	CAGNNNCTG	2 cut(s)	932, 2230
Ama87I	CYCGRG	3 cut(s)	282, 2183, 2889
Aor13HI	TCCGGA	2 cut(s)	74, 1906
AoxI	GGCC	4 cut(s)	96, 2718, 2893, 2903
ApeKI	GCWGC	9 cut(s)	825, 1433, 1796, 2723, 2726, 2729, 2807, 2810, 2932
ApoI	RAATTY	6 cut(s)	1269, 1738, 1829, 1858, 2391, 2584
ArsI	GACNNNNNNTTYG	2 cut(s)	188, 220
AseI	ATTAAT	2 cut(s)	462, 3117
Asp700I	GAANNNNTTC	2 cut(s)	1858, 1992
AspLEI	GCGC	1 cut(s)	2071
AspS9I	GGNCC	6 cut(s)	39, 77, 389, 1965, 2885, 2903
AsuC2I	CCSGG	1 cut(s)	64
AvaI	CYCGRG	3 cut(s)	282, 2183, 2889
AvaII	GGWCC	5 cut(s)	39, 77, 389, 1965, 2885
BanI	GGYRCC	1 cut(s)	11
BanII	GRGCYC	1 cut(s)	1778
BbrPI	CACGTG	1 cut(s)	3167
BbsI	GAAGAC	2 cut(s)	129, 1356
Bbv12I	GWGCWC	2 cut(s)	283, 1778
BbvI	GCAGC	9 cut(s)	837, 1445, 1808, 2713, 2735, 2741, 2794, 2797, 2919
BccI	CCATC	8 cut(s)	317, 1028, 1309, 1707, 1841, 3134, 3224, 3250
BceAI	ACGGC	4 cut(s)	111, 187, 196, 1932
BcgI	CGANNNNNNTGC	2 cut(s)	2344, 2378
BciT130I	CCWGG	2 cut(s)	537, 591
BciVI	GTATCC	2 cut(s)	1443, 2292
BcnI	CCSGG	1 cut(s)	64
BcuI	ACTAGT	1 cut(s)	491
BfaI	CTAG	8 cut(s)	492, 1355, 1521, 1661, 1709, 2159, 2438, 3333
BfmI	CTRYAG	4 cut(s)	2315, 2727, 2933, 3386
BfoI	RGCGCY	1 cut(s)	2072
BfrI	CTTAAG	2 cut(s)	2096, 3338
BfuAI	ACCTGC	2 cut(s)	1913, 1931
BfuI	GTATCC	2 cut(s)	1443, 2292
BglII	AGATCT	1 cut(s)	3349
BlpI	GCTNAGC	1 cut(s)	815
Bme1390I	CCNGG	3 cut(s)	64, 537, 591
Bme18I	GGWCC	5 cut(s)	39, 77, 389, 1965, 2885
BmeT110I	CYCGRG	3 cut(s)	282, 2183, 2889
BmgBI	CACGTC	1 cut(s)	1307
BmgT120I	GGNCC	6 cut(s)	39, 77, 389, 1965, 2885, 2903
BmiI	GGNNCC	3 cut(s)	13, 79, 1966
BmrFI	CCNGG	3 cut(s)	64, 537, 591
BmrI	ACTGGG	2 cut(s)	898, 1971
BmsI	GCATC	6 cut(s)	154, 682, 1151, 2563, 2945, 3296
BmuI	ACTGGG	2 cut(s)	898, 1971
BpiI	GAAGAC	2 cut(s)	129, 1356
BpmI	CTGGAG	3 cut(s)	4, 156, 2996
Bpu10I	CCTNAGC	3 cut(s)	696, 1097, 1344
Bpu1102I	GCTNAGC	1 cut(s)	815
BpuEI	CTTGAG	4 cut(s)	10, 1193, 2294, 2739
BpuMI	CCSGG	1 cut(s)	64
BsaAI	YACGTR	1 cut(s)	3167
BsaBI	GATNNNNATC	2 cut(s)	1753, 2577
BsaHI	GRCGYC	1 cut(s)	134
BsaI	GGTCTC	2 cut(s)	36, 2196
BsaJI	CCNNGG	5 cut(s)	237, 590, 1428, 1955, 3123
BsaWI	WCCGGW	3 cut(s)	74, 1188, 1906
BsaXI	ACNNNNNCTCC	8 cut(s)	73, 103, 515, 545, 1120, 1150, 2810, 2840
Bsc4I	CCNNNNNNNGG	5 cut(s)	27, 1906, 1961, 2602, 3200
Bse1I	ACTGG	8 cut(s)	555, 904, 961, 1275, 1612, 1966, 2514, 2800
Bse3DI	GCAATG	1 cut(s)	360
Bse8I	GATNNNNATC	2 cut(s)	1753, 2577
BseAI	TCCGGA	2 cut(s)	74, 1906
BseBI	CCWGG	2 cut(s)	537, 591
BseDI	CCNNGG	5 cut(s)	237, 590, 1428, 1955, 3123
BseJI	GATNNNNATC	2 cut(s)	1753, 2577
BseLI	CCNNNNNNNGG	5 cut(s)	27, 1906, 1961, 2602, 3200
BseMI	GCAATG	1 cut(s)	360
BseNI	ACTGG	8 cut(s)	555, 904, 961, 1275, 1612, 1966, 2514, 2800
BseRI	GAGGAG	4 cut(s)	169, 172, 1172, 2942
BseXI	GCAGC	9 cut(s)	837, 1445, 1808, 2713, 2735, 2741, 2794, 2797, 2919
BseYI	CCCAGC	1 cut(s)	2018
BsgI	GTGCAG	1 cut(s)	1959
Bsh1236I	CGCG	1 cut(s)	3428
BshFI	GGCC	4 cut(s)	98, 2720, 2895, 2905
BshNI	GGYRCC	1 cut(s)	11
BsiHKAI	GWGCWC	2 cut(s)	283, 1778
BsiHKCI	CYCGRG	3 cut(s)	282, 2183, 2889
BsiSI	CCGG	5 cut(s)	9, 64, 75, 1189, 1907
BslFI	GGGAC	5 cut(s)	190, 199, 255, 314, 886
BslI	CCNNNNNNNGG	5 cut(s)	27, 1906, 1961, 2602, 3200
BsmBI	CGTCTC	1 cut(s)	2345
BsmFI	GGGAC	5 cut(s)	190, 199, 255, 314, 886
BsmI	GAATGC	3 cut(s)	1710, 2341, 3326
BsnI	GGCC	4 cut(s)	98, 2720, 2895, 2905
Bso31I	GGTCTC	2 cut(s)	36, 2196
BsoBI	CYCGRG	3 cut(s)	282, 2183, 2889
Bsp1286I	GDGCHC	2 cut(s)	283, 1778
Bsp13I	TCCGGA	2 cut(s)	74, 1906
Bsp1407I	TGTACA	2 cut(s)	2036, 2599
Bsp143I	GATC	9 cut(s)	658, 919, 929, 1650, 1978, 2177, 2831, 2998, 3349
Bsp1720I	GCTNAGC	1 cut(s)	815
BspANI	GGCC	4 cut(s)	98, 2720, 2895, 2905
BspEI	TCCGGA	2 cut(s)	74, 1906
BspFNI	CGCG	1 cut(s)	3428
BspHI	TCATGA	2 cut(s)	877, 1996
BspLI	GGNNCC	3 cut(s)	13, 79, 1966
BspMAI	CTGCAG	3 cut(s)	2731, 2937, 3390
BspMI	ACCTGC	2 cut(s)	1913, 1931
BspPI	GGATC	3 cut(s)	653, 937, 2185
BspQI	GCTCTTC	1 cut(s)	771
BspT107I	GGYRCC	1 cut(s)	11
BspTI	CTTAAG	2 cut(s)	2096, 3338
BspTNI	GGTCTC	2 cut(s)	36, 2196
BsrBI	CCGCTC	1 cut(s)	1761
BsrDI	GCAATG	1 cut(s)	360
BsrGI	TGTACA	2 cut(s)	2036, 2599
BsrI	ACTGG	8 cut(s)	555, 904, 961, 1275, 1612, 1966, 2514, 2800
BssECI	CCNNGG	5 cut(s)	237, 590, 1428, 1955, 3123
BssMI	GATC	9 cut(s)	658, 919, 929, 1650, 1978, 2177, 2831, 2998, 3349
BssNI	GRCGYC	1 cut(s)	134
BssT1I	CCWWGG	2 cut(s)	237, 1428
Bst2UI	CCWGG	2 cut(s)	537, 591
Bst4CI	ACNGT	8 cut(s)	253, 259, 337, 371, 472, 1015, 1132, 2646
Bst6I	CTCTTC	3 cut(s)	771, 1407, 1636
BstACI	GRCGYC	1 cut(s)	134
BstAFI	CTTAAG	2 cut(s)	2096, 3338
BstAUI	TGTACA	2 cut(s)	2036, 2599
BstBAI	YACGTR	1 cut(s)	3167
BstC8I	GCNNGC	5 cut(s)	190, 1196, 1560, 2067, 3072
BstEII	GGTNACC	2 cut(s)	1788, 2798
BstFNI	CGCG	1 cut(s)	3428
BstH2I	RGCGCY	1 cut(s)	2072
BstHHI	GCGC	1 cut(s)	2071
BstKTI	GATC	9 cut(s)	661, 922, 932, 1653, 1981, 2180, 2834, 3001, 3352
BstMBI	GATC	9 cut(s)	658, 919, 929, 1650, 1978, 2177, 2831, 2998, 3349
BstNI	CCWGG	2 cut(s)	537, 591
BstNSI	RCATGY	3 cut(s)	791, 1202, 3082
BstPI	GGTNACC	2 cut(s)	1788, 2798
BstSCI	CCNGG	3 cut(s)	62, 535, 589
BstSFI	CTRYAG	4 cut(s)	2315, 2727, 2933, 3386
BstUI	CGCG	1 cut(s)	3428
BstV1I	GCAGC	9 cut(s)	837, 1445, 1808, 2713, 2735, 2741, 2794, 2797, 2919
BstV2I	GAAGAC	2 cut(s)	129, 1356
BstX2I	RGATCY	2 cut(s)	929, 3349
BstXI	CCANNNNNNTGG	1 cut(s)	2716
BstYI	RGATCY	2 cut(s)	929, 3349
BsuI	GTATCC	2 cut(s)	1443, 2292
BsuRI	GGCC	4 cut(s)	98, 2720, 2895, 2905
BtrI	CACGTC	1 cut(s)	1307
BtsI	GCAGTG	1 cut(s)	561
BveI	ACCTGC	2 cut(s)	1913, 1931
Cac8I	GCNNGC	5 cut(s)	190, 1196, 1560, 2067, 3072
CaiI	CAGNNNCTG	2 cut(s)	932, 2230
CciI	TCATGA	2 cut(s)	877, 1996
CfoI	GCGC	1 cut(s)	2071
Cfr13I	GGNCC	6 cut(s)	39, 77, 389, 1965, 2885, 2903
CseI	GACGC	1 cut(s)	1608
Csp6I	GTAC	4 cut(s)	468, 2037, 2600, 3261
CspCI	CAANNNNNGTGG	2 cut(s)	1681, 1716
CviQI	GTAC	4 cut(s)	468, 2037, 2600, 3261
DpnI	GATC	9 cut(s)	660, 921, 931, 1652, 1980, 2179, 2833, 3000, 3351
DpnII	GATC	9 cut(s)	658, 919, 929, 1650, 1978, 2177, 2831, 2998, 3349
DraI	TTTAAA	2 cut(s)	1281, 1720
DraIII	CACNNNGTG	1 cut(s)	869
EaeI	YGGCCR	1 cut(s)	2718
Eam1104I	CTCTTC	3 cut(s)	771, 1407, 1636
EarI	CTCTTC	3 cut(s)	771, 1407, 1636
EciI	GGCGGA	2 cut(s)	175, 1546
Ecl136II	GAGCTC	1 cut(s)	1776
Eco130I	CCWWGG	2 cut(s)	237, 1428
Eco24I	GRGCYC	1 cut(s)	1778
Eco31I	GGTCTC	2 cut(s)	36, 2196
Eco47I	GGWCC	5 cut(s)	39, 77, 389, 1965, 2885
Eco53kI	GAGCTC	1 cut(s)	1776
Eco57I	CTGAAG	6 cut(s)	1196, 1277, 1355, 2103, 2129, 2288
Eco72I	CACGTG	1 cut(s)	3167
Eco88I	CYCGRG	3 cut(s)	282, 2183, 2889
Eco91I	GGTNACC	2 cut(s)	1788, 2798
EcoICRI	GAGCTC	1 cut(s)	1776
EcoO109I	RGGNCCY	1 cut(s)	39
EcoO65I	GGTNACC	2 cut(s)	1788, 2798
EcoRI	GAATTC	1 cut(s)	2584
EcoRII	CCWGG	2 cut(s)	535, 589
EcoT14I	CCWWGG	2 cut(s)	237, 1428
EcoT22I	ATGCAT	2 cut(s)	519, 2578
EcoT38I	GRGCYC	1 cut(s)	1778
ErhI	CCWWGG	2 cut(s)	237, 1428
Esp3I	CGTCTC	1 cut(s)	2345
FalI	AAGNNNNNCTT	4 cut(s)	1542, 1574, 2953, 2985
FaqI	GGGAC	5 cut(s)	190, 199, 255, 314, 886
FauI	CCCGC	4 cut(s)	207, 225, 588, 1506
FauNDI	CATATG	3 cut(s)	481, 2704, 2857
FblI	GTMKAC	1 cut(s)	2849
FriOI	GRGCYC	1 cut(s)	1778
FspBI	CTAG	8 cut(s)	492, 1355, 1521, 1661, 1709, 2159, 2438, 3333
GlaI	GCGC	1 cut(s)	2070
GsaI	CCCAGC	1 cut(s)	2022
GsuI	CTGGAG	3 cut(s)	4, 156, 2996
HaeII	RGCGCY	1 cut(s)	2072
HaeIII	GGCC	4 cut(s)	98, 2720, 2895, 2905
HapII	CCGG	5 cut(s)	9, 64, 75, 1189, 1907
HgaI	GACGC	1 cut(s)	1608
HhaI	GCGC	1 cut(s)	2071
Hin1I	GRCGYC	1 cut(s)	134
Hin6I	GCGC	1 cut(s)	2069
HinP1I	GCGC	1 cut(s)	2069
HindIII	AAGCTT	6 cut(s)	994, 1367, 2141, 2237, 2697, 2967
HpaII	CCGG	5 cut(s)	9, 64, 75, 1189, 1907
Hpy166II	GTNNAC	6 cut(s)	863, 1968, 2037, 2384, 2850, 3164
Hpy8I	GTNNAC	6 cut(s)	863, 1968, 2037, 2384, 2850, 3164
Hpy99I	CGWCG	2 cut(s)	136, 403
HpyAV	CCTTC	8 cut(s)	129, 553, 963, 1440, 1631, 1837, 2113, 3404
HpyCH4III	ACNGT	8 cut(s)	253, 259, 337, 371, 472, 1015, 1132, 2646
HpyCH4IV	ACGT	6 cut(s)	134, 435, 1306, 3026, 3046, 3166
HpySE526I	ACGT	6 cut(s)	134, 435, 1306, 3026, 3046, 3166
Hsp92I	GRCGYC	1 cut(s)	134
HspAI	GCGC	1 cut(s)	2069
Kpn2I	TCCGGA	2 cut(s)	74, 1906
Kzo9I	GATC	9 cut(s)	658, 919, 929, 1650, 1978, 2177, 2831, 2998, 3349
LguI	GCTCTTC	1 cut(s)	771
LmnI	GCTCC	4 cut(s)	65, 523, 1191, 2929
Lsp1109I	GCAGC	9 cut(s)	837, 1445, 1808, 2713, 2735, 2741, 2794, 2797, 2919
LweI	GCATC	6 cut(s)	154, 682, 1151, 2563, 2945, 3296
MaeI	CTAG	8 cut(s)	492, 1355, 1521, 1661, 1709, 2159, 2438, 3333
MaeII	ACGT	6 cut(s)	134, 435, 1306, 3026, 3046, 3166
MalI	GATC	9 cut(s)	660, 921, 931, 1652, 1980, 2179, 2833, 3000, 3351
MbiI	CCGCTC	1 cut(s)	1761
MboI	GATC	9 cut(s)	658, 919, 929, 1650, 1978, 2177, 2831, 2998, 3349
MfeI	CAATTG	1 cut(s)	3098
MflI	RGATCY	2 cut(s)	929, 3349
MhlI	GDGCHC	2 cut(s)	283, 1778
MlyI	GAGTC	6 cut(s)	356, 1129, 1327, 1833, 2409, 3183
MmeI	TCCRAC	3 cut(s)	686, 1361, 1726
Mph1103I	ATGCAT	2 cut(s)	519, 2578
MroI	TCCGGA	2 cut(s)	74, 1906
MroXI	GAANNNNTTC	2 cut(s)	1858, 1992
MslI	CAYNNNNRTG	6 cut(s)	414, 786, 1110, 2216, 3083, 3210
MspA1I	CMGCKG	3 cut(s)	1375, 2288, 2726
MspCI	CTTAAG	2 cut(s)	2096, 3338
MspI	CCGG	5 cut(s)	9, 64, 75, 1189, 1907
MspR9I	CCNGG	3 cut(s)	64, 537, 591
MunI	CAATTG	1 cut(s)	3098
Mva1269I	GAATGC	3 cut(s)	1710, 2341, 3326
MvaI	CCWGG	2 cut(s)	537, 591
MvnI	CGCG	1 cut(s)	3428
NciI	CCSGG	1 cut(s)	64
NdeI	CATATG	3 cut(s)	481, 2704, 2857
NdeII	GATC	9 cut(s)	658, 919, 929, 1650, 1978, 2177, 2831, 2998, 3349
NlaIV	GGNNCC	3 cut(s)	13, 79, 1966
NmeAIII	GCCGAG	1 cut(s)	121
NmuCI	GTSAC	9 cut(s)	247, 253, 531, 892, 1132, 1788, 2798, 3132, 3367
NsiI	ATGCAT	2 cut(s)	519, 2578
NspI	RCATGY	3 cut(s)	791, 1202, 3082
PaeR7I	CTCGAG	2 cut(s)	2183, 2889
PagI	TCATGA	2 cut(s)	877, 1996
PaqCI	CACCTGC	1 cut(s)	1913
PciI	ACATGT	1 cut(s)	3078
PciSI	GCTCTTC	1 cut(s)	771
PctI	GAATGC	3 cut(s)	1710, 2341, 3326
PdmI	GAANNNNTTC	2 cut(s)	1858, 1992
PfeI	GAWTC	5 cut(s)	1064, 1321, 2087, 2356, 3234
PflFI	GACNNNGTC	1 cut(s)	1963
PflMI	CCANNNNNTGG	1 cut(s)	3200
PfoI	TCCNGGA	1 cut(s)	62
PleI	GAGTC	6 cut(s)	355, 1129, 1327, 1832, 2409, 3182
PmaCI	CACGTG	1 cut(s)	3167
PmlI	CACGTG	1 cut(s)	3167
PpsI	GAGTC	6 cut(s)	355, 1129, 1327, 1832, 2409, 3182
Ppu21I	YACGTR	1 cut(s)	3167
PpuMI	RGGWCCY	1 cut(s)	39
PscI	ACATGT	1 cut(s)	3078
PshBI	ATTAAT	2 cut(s)	462, 3117
PsiI	TTATAA	1 cut(s)	1250
Psp124BI	GAGCTC	1 cut(s)	1778
Psp1406I	AACGTT	1 cut(s)	3026
Psp5II	RGGWCCY	1 cut(s)	39
Psp6I	CCWGG	2 cut(s)	535, 589
PspCI	CACGTG	1 cut(s)	3167
PspEI	GGTNACC	2 cut(s)	1788, 2798
PspFI	CCCAGC	1 cut(s)	2018
PspGI	CCWGG	2 cut(s)	535, 589
PspN4I	GGNNCC	3 cut(s)	13, 79, 1966
PspPI	GGNCC	6 cut(s)	39, 77, 389, 1965, 2885, 2903
PspPPI	RGGWCCY	1 cut(s)	39
PspXI	VCTCGAGB	1 cut(s)	2889
PstI	CTGCAG	3 cut(s)	2731, 2937, 3390
PstNI	CAGNNNCTG	2 cut(s)	932, 2230
PsuI	RGATCY	2 cut(s)	929, 3349
PsyI	GACNNNGTC	1 cut(s)	1963
PvuII	CAGCTG	3 cut(s)	1375, 2288, 2726
RsaI	GTAC	4 cut(s)	469, 2038, 2601, 3262
RsaNI	GTAC	4 cut(s)	468, 2037, 2600, 3261
RseI	CAYNNNNRTG	6 cut(s)	414, 786, 1110, 2216, 3083, 3210
SacI	GAGCTC	1 cut(s)	1778
SapI	GCTCTTC	1 cut(s)	771
Sau3AI	GATC	9 cut(s)	658, 919, 929, 1650, 1978, 2177, 2831, 2998, 3349
Sau96I	GGNCC	6 cut(s)	39, 77, 389, 1965, 2885, 2903
SchI	GAGTC	6 cut(s)	356, 1129, 1327, 1833, 2409, 3183
ScrFI	CCNGG	3 cut(s)	64, 537, 591
SduI	GDGCHC	2 cut(s)	283, 1778
SfaNI	GCATC	6 cut(s)	154, 682, 1151, 2563, 2945, 3296
SfcI	CTRYAG	4 cut(s)	2315, 2727, 2933, 3386
Sfr274I	CTCGAG	2 cut(s)	2183, 2889
SinI	GGWCC	5 cut(s)	39, 77, 389, 1965, 2885
SlaI	CTCGAG	2 cut(s)	2183, 2889
SmiMI	CAYNNNNRTG	6 cut(s)	414, 786, 1110, 2216, 3083, 3210
SmlI	CTYRAG	8 cut(s)	25, 1208, 2096, 2183, 2273, 2754, 2889, 3338
SmoI	CTYRAG	8 cut(s)	25, 1208, 2096, 2183, 2273, 2754, 2889, 3338
SpeI	ACTAGT	1 cut(s)	491
SspMI	CTAG	8 cut(s)	492, 1355, 1521, 1661, 1709, 2159, 2438, 3333
SstI	GAGCTC	1 cut(s)	1778
StyD4I	CCNGG	3 cut(s)	62, 535, 589
StyI	CCWWGG	2 cut(s)	237, 1428
TaaI	ACNGT	8 cut(s)	253, 259, 337, 371, 472, 1015, 1132, 2646
TaiI	ACGT	6 cut(s)	137, 438, 1309, 3029, 3049, 3169
TaqI	TCGA	9 cut(s)	375, 1060, 1757, 1986, 2184, 2418, 2547, 2890, 3138
TatI	WGTACW	2 cut(s)	2036, 2599
TauI	GCSGC	3 cut(s)	428, 1764, 2723
TfiI	GAWTC	5 cut(s)	1064, 1321, 2087, 2356, 3234
TseFI	GTSAC	9 cut(s)	247, 253, 531, 892, 1132, 1788, 2798, 3132, 3367
TseI	GCWGC	9 cut(s)	825, 1433, 1796, 2723, 2726, 2729, 2807, 2810, 2932
Tsp45I	GTSAC	9 cut(s)	247, 253, 531, 892, 1132, 1788, 2798, 3132, 3367
TspGWI	ACGGA	1 cut(s)	3227
Tth111I	GACNNNGTC	1 cut(s)	1963
Van91I	CCANNNNNTGG	1 cut(s)	3200
Vha464I	CTTAAG	2 cut(s)	2096, 3338
VpaK11BI	GGWCC	5 cut(s)	39, 77, 389, 1965, 2885
VspI	ATTAAT	2 cut(s)	462, 3117
XapI	RAATTY	6 cut(s)	1269, 1738, 1829, 1858, 2391, 2584
XbaI	TCTAGA	3 cut(s)	1660, 2158, 3332
XceI	RCATGY	3 cut(s)	791, 1202, 3082
XhoI	CTCGAG	2 cut(s)	2183, 2889
XmiI	GTMKAC	1 cut(s)	2849
XmnI	GAANNNNTTC	2 cut(s)	1858, 1992
XspI	CTAG	8 cut(s)	492, 1355, 1521, 1661, 1709, 2159, 2438, 3333
ZraI	GACGTC	1 cut(s)	135
Zsp2I	ATGCAT	2 cut(s)	519, 2578

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.