Rroxscaffold_7G00171710
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
12004174 .. 12014727
10554 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00171710.1

Sequence Viewer

Length: 3276 bp
ATGTTCTCCAGGTCCCAGCAGAGATCGTCAATCTCGCCGTTCCGGTCCCGGAAGTCGCCGGCGCCGTCCAAGCCTCACGTGCGTCCCGCCACCACGCCTTCCTCCACGTCTTCGTCTCGACCGCCGTCCAAGCCCTCTGTCTCGCCGGCCTCCGCCTCCGCCTCCAGCTTGAGCCTGCCGGCGCCGCCCGATGTCTCCAAGTCCAAGGAGAATGTCACCGTCACCGTTAGGTTTCGCCCCCTCAGTGCTCGGGAGATTAACAAAGGGGACGAGATTGCGTGGTATGCAGATGGGGACTATACAGTGAGGAATGAGTTCAATTCTAACATTGCTTATGGCTTTGATAGGGTTTTTGGTCCAGCAACGACGACACGCCATGTATATGATATTGCAGCGCAGCAAGTTGTCAGTGGTGTTATGCAAGGGATTAATGGTACTGTATTTGCATATGGTGTTACTAGTAGTGGGAAGACACATACAATGCATTGTCTTGCTCAAGTTCTGCTCGTTCCTGGGGAGCAGAAGTCACCCGGTGTTATTCCACTGGCAGTGAAGGATGTGTTTGGAATTATACAAGAGACACCTGGGCGAGAGTTTCTTCTTCGTGTTTCATATCTTGAAATTTACAATGAGGTCATAAACGACTTACTTGATCCAACAGGACAGAACCTACGAATCAGAGAGGATGCTCAGGGAACTTATGTTGAAGGAATCAAAGAGGAAGTTGTTTTGTCTCCTGCTCATGCTCTTTCCTTGATAGCAACCGGAGAAGGATCTGAAAGTTCTAAAACCGAAACAACTGGATTGAGGAGAAAGGAGGGCTCATACATCAATAAAAGCTTGCTTACACTTGGCACTGTGATATCTAAACTTACAGATGGGAAGGCAACTCATGTTCCTTATCGAGATTCAAAACTCACCCGTTTGTTGCAGTCCTCCCTCAGTGGTCATGGTCGTATATCTCTCATTTGCACTCTGACCCCTGCATCTAGCAATACTGAGGAGACGCACAACACACTAAAGTTTGCACATCGGAGCAAGTATGTGGAAATAAAAGCTGCCCAAAATAAGATTATCGATGAAAAGTCTCTTATCAAAAAGTATCAAAGGGAAATTACCATTTTAAAGGAAGAGCTTCAGCAGTTAAAACGTGGCATGATGGAGACTCCAAATATACCTGCATCTACTCAGGAAGACCTGGTTAATTTAAAGCTTCAGCTGGAAGCTGGTCAGGTGAGATTGCGGTCAAGATTGGAAGAGGAGGAAGAAGCCAAGGCAGCTTTAATGGGAAGAATACAACGATTGACTAAACTAATCTTAGTCTCCACAAAAAATACCATACCACATAGCATATCTTTGCCTAGCAATAGACGGAGGCATTCATTTGGGGAAGATGAGATACTTCATGCTTCCGAGCTTTCAGTGGAAGGAAGAGATGATATCACTAATCTTGATGAGTTGGTCAAGGATTACAAAAGCAACAGAAGACGTGGAATGCTTGGATGGTTTAAACTGAAAAAACCTGAGAATCTCATGGGATTATCACCAAGTGCTGATAGTGAGAGCTCTTCTACTAGTGGTTCACCAGCACCTTGTTCAAAATCTTCTCAAAATAGAGTTAACCCCAATGATTTGAAGGATGGACGAAGAAAGTCTGTCAGTAGAAGGGGTGATGATCATACCATCATTGACTCATTTCCGGAAAGAACCCAAGCTGGTGATTTGTTTGCTGCTGCAGTTGGTGGTCGCCATTTGCCTCCAACTGGATTCACAATAACCGATCAAATGGATCTCCTTCGTGAGCAAGTGAAAATGTTGGCTGGGGAGGTAGCATTATGTACAAGTTCTCTGAAAAGATTGTCCGAGCAAGCAGCTACCAACCCAGAAGATTCAAAACTTAGGGAACAAATGCAAAAGTTGAAGGATGAAATTAGTGAAAAGAAGTTTCAGATACGTGTCCTAGAGCAACGCATGATTGGATCACTTGAGATGACTCCGCACAGGTCGAACAATAGTGAAATGTCTCAGGCTTTGTCCAAGCTTACGACTCAGTTAAATGAGAAAACTTTTGAACTTGAGATCAAGACAGCAGACAATAGGATACTTCAGGAGCAGCTACAGATGAAGATTTCAGAAAACTCAGAAATGCAAGAGACAATTCTGCTGCTAAGACAACAGCTTAGTTCTAAAGAAAAGAACAATGATGAAAGAGATATGATTGCTCCATGTGAAGAAACCTGTGCTGATGAAAATACACCGACCAGTGTGATGAGCTTAAACAGAATCCTTTCCCTTGAGGATTCCAAAGAGTGTAACAAAGATGCATACTTTAATTCCCAAATCCATGCACAGGCTTCTAAAATAGAAGATCTAAAGCAAGAGAAGGTGATACTGTCTGAGGAAAAGGAGGGGCTTGAAGTTCAGAATCTGAAACTTTCAGAAGAAGCTTCCTATGCCAAAGAGTTGGCTTCAGCTGCAGCAGTGGAGCTTAGAAACTTGGCTGAAGAAGTAACAAAGCTTTCTTATGAAAACGCCAAGCTGACTGGTGACCTTGCTGCTGCAAAAGAGGTTCAATGCCGATCAAACTGTTGCCAAAGGTCTACTTCATATGATTTCAAGAAAAATAGCATAAATGGGGCTCGAGCTAATGGATTCCATAAAAGGTCAGAGGATGAAGTTTTGGTTGAGGAGCTGCAGAAGGAACTTACTTCAAGATGTCAAAGAGAAGCTGCTCTGGAGAAAGAACTATATGAGAGAGATCAGTTAGAAGATGATTTACGAAAAACACTAGAGAATGTGAAACAACATGAAGCTGACTTGGAAAATGAGCTGGCAAATATGTGGGTGCGAGTTGCAAAATTGAGGAAGTCTGGTAATAATGCTGAGGATGTGTCACTTCAAGGGGTTCTTGAGTCTGAAAGTTCACATACGAGAATTAGAAATGGGAATGTGCCATCTAATAATCACTCATATGCTATGTTCAAGGACAATGAAAGCAATGAAAACTTGAATGAGATGGGTACATTAGAAGATTTAAGAGCTAGCTATCTGGAAGAAAAGAGAAGATGCAAAGAGCTAGAATCCTATATTTCTAGGTTGAAGGGTGAAGATGTTGCTGGTCTGGATGTCACCGCTCTTGAACAGTTGCAGAACCTTCATGTTGAGGCTATAACAAAGATTTGCCATGCAAAGGTGATTCTTCTTGTGCAAATCGTGTTTTATAGCGAGCTGAGTTCACTTAATCCCCAGATTCACGGATTTAGGTATTTCAGGTAG

Protein Analysis

1091

Amino Acids

122.07

Weight (kDa)

6.36

Isoelectric Point (pI)

53.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 71 - 217 2.3e-17 Microtubule binding
Kinesin PF00225 77 - 261 2.9e-43 Kinesin motor domain
Kinesin PF00225 258 - 348 2.9e-31 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1186
AccB1I GGYRCC 2 cut(s) 61, 181
AccBSI CCGCTC 1 cut(s) 3134
AccI GTMKAC 1 cut(s) 2600
AccIII TCCGGA 1 cut(s) 1699
AciI CCGC 8 cut(s) 87, 122, 153, 159, 185, 1243, 1997, 3132
AclWI GGATC 4 cut(s) 647, 781, 1797, 1987
AcsI RAATTY 1 cut(s) 621
AcuI CTGAAG 5 cut(s) 1121, 1199, 2090, 2454, 2523
AcvI CACGTG 1 cut(s) 79
AcyI GRCGYC 2 cut(s) 62, 182
AdeI CACNNNGTG 2 cut(s) 533, 1550
AfaI GTAC 3 cut(s) 436, 1840, 3022
AfiI CCNNNNNNNGG 3 cut(s) 1763, 2350, 3190
AflIII ACRYGT 1 cut(s) 1954
AhlI ACTAGT 2 cut(s) 458, 1574
AjiI CACGTC 2 cut(s) 108, 1490
AjnI CCWGG 4 cut(s) 8, 511, 583, 1197
Alw21I GWGCWC 2 cut(s) 250, 1568
AlwI GGATC 4 cut(s) 647, 781, 1797, 1987
AlwNI CAGNNNCTG 1 cut(s) 2428
Ama87I CYCGRG 2 cut(s) 249, 2640
Aor13HI TCCGGA 1 cut(s) 1699
AoxI GGCC 1 cut(s) 147
ApoI RAATTY 1 cut(s) 621
AseI ATTAAT 1 cut(s) 429
Asp700I GAANNNNTTC 3 cut(s) 314, 1134, 2287
AspLEI GCGC 3 cut(s) 64, 184, 397
AspS9I GGNCC 3 cut(s) 12, 45, 356
AsuC2I CCSGG 2 cut(s) 49, 531
AsuNHI GCTAGC 1 cut(s) 3041
AvaI CYCGRG 2 cut(s) 249, 2640
AvaII GGWCC 3 cut(s) 12, 45, 356
BanI GGYRCC 2 cut(s) 61, 181
BanII GRGCYC 3 cut(s) 824, 1568, 2641
BarI GAAGNNNNNNTAC 4 cut(s) 1383, 1415, 2760, 2792
BbrPI CACGTG 1 cut(s) 79
BbsI GAAGAC 4 cut(s) 102, 476, 1200, 1492
Bbv12I GWGCWC 2 cut(s) 250, 1568
BbvCI CCTCAGC 1 cut(s) 2883
BccI CCATC 8 cut(s) 284, 872, 1153, 1497, 1634, 1691, 2962, 3010
BceAI ACGGC 3 cut(s) 22, 49, 109
BciT130I CCWGG 4 cut(s) 10, 513, 585, 1199
BciVI GTATCC 1 cut(s) 2094
BclI TGATCA 1 cut(s) 1675
BcnI CCSGG 2 cut(s) 49, 531
BcuI ACTAGT 2 cut(s) 458, 1574
BfaI CTAG 9 cut(s) 459, 990, 1362, 1575, 1961, 2789, 3042, 3077, 3093
BfmI CTRYAG 4 cut(s) 1734, 2117, 2475, 2693
BfoI RGCGCY 2 cut(s) 65, 185
BfuAI ACCTGC 1 cut(s) 1186
BfuI GTATCC 1 cut(s) 2094
BglII AGATCT 1 cut(s) 2368
Bme1390I CCNGG 6 cut(s) 10, 49, 513, 531, 585, 1199
Bme18I GGWCC 3 cut(s) 12, 45, 356
BmeT110I CYCGRG 2 cut(s) 249, 2640
BmgBI CACGTC 2 cut(s) 108, 1490
BmgT120I GGNCC 3 cut(s) 12, 45, 356
BmiI GGNNCC 4 cut(s) 14, 47, 63, 183
BmrFI CCNGG 6 cut(s) 10, 49, 513, 531, 585, 1199
BmsI GCATC 5 cut(s) 676, 995, 1190, 2311, 3056
BmtI GCTAGC 1 cut(s) 3045
BoxI GACNNNNGTC 1 cut(s) 124
BpiI GAAGAC 4 cut(s) 102, 476, 1200, 1492
BpmI CTGGAG 2 cut(s) 148, 2756
Bpu10I CCTNAGC 2 cut(s) 690, 2883
BpuEI CTTGAG 6 cut(s) 190, 480, 2006, 2096, 2315, 2930
BpuMI CCSGG 2 cut(s) 49, 531
Bsa29I ATCGAT 1 cut(s) 1077
BsaAI YACGTR 2 cut(s) 79, 1955
BsaHI GRCGYC 2 cut(s) 62, 182
BsaJI CCNNGG 4 cut(s) 204, 512, 584, 1272
BsaWI WCCGGW 3 cut(s) 42, 764, 1699
BsaXI ACNNNNNCTCC 2 cut(s) 509, 539
Bsc4I CCNNNNNNNGG 3 cut(s) 1763, 2350, 3190
Bse118I RCCGGY 3 cut(s) 58, 145, 178
Bse1I ACTGG 5 cut(s) 549, 805, 1768, 2262, 2548
Bse3DI GCAATG 2 cut(s) 327, 3004
BseAI TCCGGA 1 cut(s) 1699
BseBI CCWGG 4 cut(s) 10, 513, 585, 1199
BseCI ATCGAT 1 cut(s) 1077
BseDI CCNNGG 4 cut(s) 204, 512, 584, 1272
BseGI GGATG 8 cut(s) 562, 691, 1508, 1645, 1930, 2677, 2893, 3130
BseLI CCNNNNNNNGG 3 cut(s) 1763, 2350, 3190
BseMI GCAATG 2 cut(s) 327, 3004
BseNI ACTGG 5 cut(s) 549, 805, 1768, 2262, 2548
BseRI GAGGAG 4 cut(s) 823, 1016, 1274, 2702
BseYI CCCAGC 2 cut(s) 15, 1820
Bsh1285I CGRYCG 1 cut(s) 122
BshFI GGCC 1 cut(s) 149
BshNI GGYRCC 2 cut(s) 61, 181
BshVI ATCGAT 1 cut(s) 1077
BsiEI CGRYCG 1 cut(s) 122
BsiHKAI GWGCWC 2 cut(s) 250, 1568
BsiHKCI CYCGRG 2 cut(s) 249, 2640
BsiSI CCGG 8 cut(s) 43, 49, 59, 146, 179, 531, 765, 1700
BslFI GGGAC 4 cut(s) 31, 69, 281, 308
BslI CCNNNNNNNGG 3 cut(s) 1763, 2350, 3190
BsmBI CGTCTC 2 cut(s) 120, 998
BsmFI GGGAC 4 cut(s) 31, 69, 281, 308
BsmI GAATGC 2 cut(s) 1378, 1500
BsnI GGCC 1 cut(s) 149
BsoBI CYCGRG 2 cut(s) 249, 2640
Bsp1286I GDGCHC 4 cut(s) 250, 824, 1568, 2641
Bsp13I TCCGGA 1 cut(s) 1699
Bsp1407I TGTACA 1 cut(s) 1838
BspACI CCGC 8 cut(s) 87, 122, 153, 159, 185, 1243, 1997, 3132
BspANI GGCC 1 cut(s) 149
BspDI ATCGAT 1 cut(s) 1077
BspEI TCCGGA 1 cut(s) 1699
BspLI GGNNCC 4 cut(s) 14, 47, 63, 183
BspMAI CTGCAG 3 cut(s) 1738, 2479, 2697
BspMI ACCTGC 1 cut(s) 1186
BspOI GCTAGC 1 cut(s) 3045
BspPI GGATC 4 cut(s) 647, 781, 1797, 1987
BspQI GCTCTTC 2 cut(s) 1125, 1573
BspT107I GGYRCC 2 cut(s) 61, 181
BsrBI CCGCTC 1 cut(s) 3134
BsrDI GCAATG 2 cut(s) 327, 3004
BsrFI RCCGGY 3 cut(s) 58, 145, 178
BsrGI TGTACA 1 cut(s) 1838
BsrI ACTGG 5 cut(s) 549, 805, 1768, 2262, 2548
BssAI RCCGGY 3 cut(s) 58, 145, 178
BssECI CCNNGG 4 cut(s) 204, 512, 584, 1272
BssNI GRCGYC 2 cut(s) 62, 182
BssT1I CCWWGG 2 cut(s) 204, 1272
Bst2UI CCWGG 4 cut(s) 10, 513, 585, 1199
Bst4CI ACNGT 8 cut(s) 220, 226, 304, 439, 859, 2394, 2588, 3144
Bst6I CTCTTC 4 cut(s) 1125, 1251, 1426, 1573
BstACI GRCGYC 2 cut(s) 62, 182
BstAUI TGTACA 1 cut(s) 1838
BstBAI YACGTR 2 cut(s) 79, 1955
BstC8I GCNNGC 9 cut(s) 60, 147, 176, 180, 842, 1869, 2832, 3043, 3227
BstEII GGTNACC 1 cut(s) 2546
BstF5I GGATG 8 cut(s) 562, 691, 1508, 1645, 1930, 2677, 2893, 3130
BstH2I RGCGCY 2 cut(s) 65, 185
BstHHI GCGC 3 cut(s) 64, 184, 397
BstMCI CGRYCG 1 cut(s) 122
BstMWI GCNNNNNNNGC 8 cut(s) 70, 79, 130, 184, 284, 1277, 2453, 2474
BstNI CCWGG 4 cut(s) 10, 513, 585, 1199
BstPAI GACNNNNGTC 1 cut(s) 124
BstPI GGTNACC 1 cut(s) 2546
BstSCI CCNGG 6 cut(s) 8, 47, 511, 529, 583, 1197
BstSFI CTRYAG 4 cut(s) 1734, 2117, 2475, 2693
BstV2I GAAGAC 4 cut(s) 102, 476, 1200, 1492
BstX2I RGATCY 3 cut(s) 773, 1789, 2368
BstXI CCANNNNNNTGG 1 cut(s) 2464
BstYI RGATCY 3 cut(s) 773, 1789, 2368
Bsu15I ATCGAT 1 cut(s) 1077
BsuI GTATCC 1 cut(s) 2094
BsuRI GGCC 1 cut(s) 149
BsuTUI ATCGAT 1 cut(s) 1077
BtrI CACGTC 2 cut(s) 108, 1490
BtsCI GGATG 8 cut(s) 562, 691, 1508, 1645, 1930, 2677, 2893, 3130
BtsI GCAGTG 2 cut(s) 555, 2487
BveI ACCTGC 1 cut(s) 1186
Cac8I GCNNGC 9 cut(s) 60, 147, 176, 180, 842, 1869, 2832, 3043, 3227
CaiI CAGNNNCTG 1 cut(s) 2428
CfoI GCGC 3 cut(s) 64, 184, 397
Cfr10I RCCGGY 3 cut(s) 58, 145, 178
Cfr13I GGNCC 3 cut(s) 12, 45, 356
ClaI ATCGAT 1 cut(s) 1077
CseI GACGC 2 cut(s) 71, 1015
CsiI ACCWGGT 1 cut(s) 1197
Csp6I GTAC 3 cut(s) 435, 1839, 3021
CviQI GTAC 3 cut(s) 435, 1839, 3021
DinI GGCGCC 2 cut(s) 63, 183
DraI TTTAAA 3 cut(s) 1125, 1209, 1510
DraIII CACNNNGTG 2 cut(s) 533, 1550
Eam1104I CTCTTC 4 cut(s) 1125, 1251, 1426, 1573
EarI CTCTTC 4 cut(s) 1125, 1251, 1426, 1573
EciI GGCGGA 2 cut(s) 142, 148
Ecl136II GAGCTC 1 cut(s) 1566
Eco130I CCWWGG 2 cut(s) 204, 1272
Eco24I GRGCYC 3 cut(s) 824, 1568, 2641
Eco32I GATATC 2 cut(s) 864, 1441
Eco47I GGWCC 3 cut(s) 12, 45, 356
Eco53kI GAGCTC 1 cut(s) 1566
Eco57I CTGAAG 5 cut(s) 1121, 1199, 2090, 2454, 2523
Eco72I CACGTG 1 cut(s) 79
Eco88I CYCGRG 2 cut(s) 249, 2640
Eco91I GGTNACC 1 cut(s) 2546
EcoICRI GAGCTC 1 cut(s) 1566
EcoO109I RGGNCCY 1 cut(s) 12
EcoO65I GGTNACC 1 cut(s) 2546
EcoRII CCWGG 4 cut(s) 8, 511, 583, 1197
EcoRV GATATC 2 cut(s) 864, 1441
EcoT14I CCWWGG 2 cut(s) 204, 1272
EcoT22I ATGCAT 2 cut(s) 486, 2326
EcoT38I GRGCYC 3 cut(s) 824, 1568, 2641
EgeI GGCGCC 2 cut(s) 63, 183
EheI GGCGCC 2 cut(s) 63, 183
ErhI CCWWGG 2 cut(s) 204, 1272
Esp3I CGTCTC 2 cut(s) 120, 998
FalI AAGNNNNNCTT 4 cut(s) 2587, 2619, 2892, 2924
FaqI GGGAC 4 cut(s) 31, 69, 281, 308
FauI CCCGC 1 cut(s) 94
FauNDI CATATG 3 cut(s) 448, 2608, 2971
FbaI TGATCA 1 cut(s) 1675
FblI GTMKAC 1 cut(s) 2600
FokI GGATG 8 cut(s) 569, 698, 1515, 1652, 1937, 2684, 2900, 3137
FriOI GRGCYC 3 cut(s) 824, 1568, 2641
FspBI CTAG 9 cut(s) 459, 990, 1362, 1575, 1961, 2789, 3042, 3077, 3093
GlaI GCGC 3 cut(s) 63, 183, 396
GsaI CCCAGC 2 cut(s) 19, 1824
GsuI CTGGAG 2 cut(s) 148, 2756
HaeII RGCGCY 2 cut(s) 65, 185
HaeIII GGCC 1 cut(s) 149
HapII CCGG 8 cut(s) 43, 49, 59, 146, 179, 531, 765, 1700
HgaI GACGC 2 cut(s) 71, 1015
HhaI GCGC 3 cut(s) 64, 184, 397
Hin1I GRCGYC 2 cut(s) 62, 182
Hin6I GCGC 3 cut(s) 62, 182, 395
HinP1I GCGC 3 cut(s) 62, 182, 395
HincII GTYRAC 1 cut(s) 1621
HindII GTYRAC 1 cut(s) 1621
HindIII AAGCTT 5 cut(s) 838, 1211, 2039, 2445, 2516
HpaI GTTAAC 1 cut(s) 1621
HpaII CCGG 8 cut(s) 43, 49, 59, 146, 179, 531, 765, 1700
Hpy166II GTNNAC 5 cut(s) 1583, 1621, 2601, 2924, 3236
Hpy8I GTNNAC 5 cut(s) 1583, 1621, 2601, 2924, 3236
Hpy99I CGWCG 1 cut(s) 370
HpyCH4III ACNGT 8 cut(s) 220, 226, 304, 439, 859, 2394, 2588, 3144
HpyCH4IV ACGT 5 cut(s) 78, 107, 1150, 1489, 1954
HpyF10VI GCNNNNNNNGC 8 cut(s) 70, 79, 130, 184, 284, 1277, 2453, 2474
HpySE526I ACGT 5 cut(s) 78, 107, 1150, 1489, 1954
Hsp92I GRCGYC 2 cut(s) 62, 182
HspAI GCGC 3 cut(s) 62, 182, 395
KasI GGCGCC 2 cut(s) 61, 181
Kpn2I TCCGGA 1 cut(s) 1699
KroI GCCGGC 3 cut(s) 58, 145, 178
KroNI GCCGGC 3 cut(s) 60, 147, 180
Ksp22I TGATCA 1 cut(s) 1675
KspAI GTTAAC 1 cut(s) 1621
LguI GCTCTTC 2 cut(s) 1125, 1573
LmnI GCTCC 6 cut(s) 517, 1035, 2110, 2227, 2485, 2689
LweI GCATC 5 cut(s) 676, 995, 1190, 2311, 3056
MabI ACCWGGT 1 cut(s) 1197
MaeI CTAG 9 cut(s) 459, 990, 1362, 1575, 1961, 2789, 3042, 3077, 3093
MaeII ACGT 5 cut(s) 78, 107, 1150, 1489, 1954
MaeIII GTNAC 9 cut(s) 214, 220, 454, 525, 2312, 2509, 2546, 2892, 3127
MbiI CCGCTC 1 cut(s) 3134
MflI RGATCY 3 cut(s) 773, 1789, 2368
MhlI GDGCHC 4 cut(s) 250, 824, 1568, 2641
Mly113I GGCGCC 2 cut(s) 62, 182
MlyI GAGTC 5 cut(s) 1159, 1685, 1987, 2041, 2921
MmeI TCCRAC 2 cut(s) 680, 1784
Mph1103I ATGCAT 2 cut(s) 486, 2326
MreI CGCCGGCG 1 cut(s) 58
MroI TCCGGA 1 cut(s) 1699
MroNI GCCGGC 3 cut(s) 58, 145, 178
MroXI GAANNNNTTC 3 cut(s) 314, 1134, 2287
MslI CAYNNNNRTG 2 cut(s) 381, 2970
MspA1I CMGCKG 2 cut(s) 1219, 2474
MspI CCGG 8 cut(s) 43, 49, 59, 146, 179, 531, 765, 1700
MspR9I CCNGG 6 cut(s) 10, 49, 513, 531, 585, 1199
MssI GTTTAAAC 1 cut(s) 1510
Mva1269I GAATGC 2 cut(s) 1378, 1500
MvaI CCWGG 4 cut(s) 10, 513, 585, 1199
MwoI GCNNNNNNNGC 8 cut(s) 70, 79, 130, 184, 284, 1277, 2453, 2474
NaeI GCCGGC 3 cut(s) 60, 147, 180
NarI GGCGCC 2 cut(s) 62, 182
NciI CCSGG 2 cut(s) 49, 531
NdeI CATATG 3 cut(s) 448, 2608, 2971
NgoMIV GCCGGC 3 cut(s) 58, 145, 178
NheI GCTAGC 1 cut(s) 3041
NlaIV GGNNCC 4 cut(s) 14, 47, 63, 183
NmuCI GTSAC 6 cut(s) 214, 220, 525, 2546, 2892, 3127
NsiI ATGCAT 2 cut(s) 486, 2326
PaeR7I CTCGAG 1 cut(s) 2640
PciSI GCTCTTC 2 cut(s) 1125, 1573
PcsI WCGNNNNNNNCGW 1 cut(s) 62
PctI GAATGC 2 cut(s) 1378, 1500
PdiI GCCGGC 3 cut(s) 60, 147, 180
PdmI GAANNNNTTC 3 cut(s) 314, 1134, 2287
PfoI TCCNGGA 1 cut(s) 47
PleI GAGTC 5 cut(s) 1159, 1685, 1987, 2041, 2920
PluTI GGCGCC 2 cut(s) 65, 185
PmaCI CACGTG 1 cut(s) 79
PmeI GTTTAAAC 1 cut(s) 1510
PmlI CACGTG 1 cut(s) 79
PpsI GAGTC 5 cut(s) 1159, 1685, 1987, 2041, 2920
Ppu21I YACGTR 2 cut(s) 79, 1955
PpuMI RGGWCCY 1 cut(s) 12
PshAI GACNNNNGTC 1 cut(s) 124
PshBI ATTAAT 1 cut(s) 429
Psp124BI GAGCTC 1 cut(s) 1568
Psp5II RGGWCCY 1 cut(s) 12
Psp6I CCWGG 4 cut(s) 8, 511, 583, 1197
PspCI CACGTG 1 cut(s) 79
PspEI GGTNACC 1 cut(s) 2546
PspFI CCCAGC 2 cut(s) 15, 1820
PspGI CCWGG 4 cut(s) 8, 511, 583, 1197
PspN4I GGNNCC 4 cut(s) 14, 47, 63, 183
PspPI GGNCC 3 cut(s) 12, 45, 356
PspPPI RGGWCCY 1 cut(s) 12
PspXI VCTCGAGB 1 cut(s) 2640
PstI CTGCAG 3 cut(s) 1738, 2479, 2697
PstNI CAGNNNCTG 1 cut(s) 2428
PsuI RGATCY 3 cut(s) 773, 1789, 2368
PvuII CAGCTG 2 cut(s) 1219, 2474
RsaI GTAC 3 cut(s) 436, 1840, 3022
RsaNI GTAC 3 cut(s) 435, 1839, 3021
RseI CAYNNNNRTG 2 cut(s) 381, 2970
SacI GAGCTC 1 cut(s) 1568
SapI GCTCTTC 2 cut(s) 1125, 1573
Sau96I GGNCC 3 cut(s) 12, 45, 356
SchI GAGTC 5 cut(s) 1159, 1685, 1987, 2041, 2921
ScrFI CCNGG 6 cut(s) 10, 49, 513, 531, 585, 1199
SduI GDGCHC 4 cut(s) 250, 824, 1568, 2641
SexAI ACCWGGT 1 cut(s) 1197
SfaNI GCATC 5 cut(s) 676, 995, 1190, 2311, 3056
SfcI CTRYAG 4 cut(s) 1734, 2117, 2475, 2693
SfoI GGCGCC 2 cut(s) 63, 183
Sfr274I CTCGAG 1 cut(s) 2640
SgrAI CRCCGGYG 1 cut(s) 58
SinI GGWCC 3 cut(s) 12, 45, 356
SlaI CTCGAG 1 cut(s) 2640
SmiMI CAYNNNNRTG 2 cut(s) 381, 2970
SmlI CTYRAG 7 cut(s) 169, 495, 1985, 2075, 2294, 2640, 2909
SmoI CTYRAG 7 cut(s) 169, 495, 1985, 2075, 2294, 2640, 2909
SpeI ACTAGT 2 cut(s) 458, 1574
SsiI CCGC 8 cut(s) 87, 122, 153, 159, 185, 1243, 1997, 3132
SspDI GGCGCC 2 cut(s) 61, 181
SspMI CTAG 9 cut(s) 459, 990, 1362, 1575, 1961, 2789, 3042, 3077, 3093
SstI GAGCTC 1 cut(s) 1568
StyD4I CCNGG 6 cut(s) 8, 47, 511, 529, 583, 1197
StyI CCWWGG 2 cut(s) 204, 1272
TaaI ACNGT 8 cut(s) 220, 226, 304, 439, 859, 2394, 2588, 3144
TaiI ACGT 5 cut(s) 81, 110, 1153, 1492, 1957
TaqI TCGA 5 cut(s) 118, 904, 1077, 2006, 2641
TatI WGTACW 1 cut(s) 1838
TauI GCSGC 1 cut(s) 187
TseFI GTSAC 6 cut(s) 214, 220, 525, 2546, 2892, 3127
Tsp45I GTSAC 6 cut(s) 214, 220, 525, 2546, 2892, 3127
TspGWI ACGGA 2 cut(s) 1387, 3270
VpaK11BI GGWCC 3 cut(s) 12, 45, 356
VspI ATTAAT 1 cut(s) 429
XapI RAATTY 1 cut(s) 621
XhoI CTCGAG 1 cut(s) 2640
XmiI GTMKAC 1 cut(s) 2600
XmnI GAANNNNTTC 3 cut(s) 314, 1134, 2287
XspI CTAG 9 cut(s) 459, 990, 1362, 1575, 1961, 2789, 3042, 3077, 3093
Zsp2I ATGCAT 2 cut(s) 486, 2326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.