MD01G1101300.v1.1

Nodulin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0015691
Physical Location & Seq
Reverse (-)
21423249 .. 21426170
2922 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1101300.v1.1.491

Sequence Viewer

Length: 1824 bp
ATGGAGGTTCATGGCAATAGTGGTAGTGGTAATGGTGTGAGAACTTGGGCAGATATGAAAGGCTTCGCCGTCCAAGTAATCACAGGCCGGTGGCTCATGTTGTTTGCCTCATTCCTAATGATGGCTAGTGCCGGTGCAAGCTACATGTTTGGCCTCTACTCAAACGACATCAAGTCTGTCCTTGGCTACAGCCAATCCACCCTCAACACCATCAGTTTCTTCAAGGATTTGGGGGCCAACATCGGCATCTTTTCTGGCCTAATCAACGAGGTCACGCCGCCATGGGTGGTCTTATCAATTGGTGCAGCATTCAACTTTTTCGGATACTTCATGATATGGCTAGCCGTGGCCGAAAAAATTGCCAAACCTCAAGTTTGGCACATGTGCTTGTACATCACAATGGGGGCAAATTCACATACTTTCATCAACACCGGAGCTCTAGTCACGTGTGTCAAAAACTTCCCAAGAAACCGCGGCCTCTTAATCGGGCTTTTGGAAGGCTACATAGGCCTAAGTGCAGCTGTAATTGCACAGATATACCATGCTTTGTATGGTAATGACACAAAGTCCTTCACTTTGTTTGTGGCATGGCTTCCCTCAGCTATTTCTTTGATATTTCTTCGTACCATTCGGATAATGAAGGTTATACCGCAGAAGAAATATTCCAAGGTACTACAAAAATTCTTTTTTATTTCACTTGGACTGGCAGGGTACTTATTGATCATAATCATAGTAGAGCAAAAGGTGAAATTCACACAATTTGAGTACTGTGGGAGTGCAGCTGTCGTGCTTTTCTTGCTTTTTCTCCCACTTGCTGTTGTAGTTGCAGAAGAGTACACTTCTTGGAGGACTAAGACATCTTTAAGTACCGTAAACATCGAAATTTCATCACCAGATTCGCCACCTGTGGATCAAATAATGGTAAGCCAAAACAAGGAAATGTTGAAGGTAAAAAAGCTTTCTTGTTGGGAAAATGTATTTAGTCCACCGGAGATCGGACAAGACTATACAATCCTCCAAGCAATATTCAGCATTGAGATGTTAACTTTATTTTTAACCACATTGTGTGGCCTTGGAGGCATGCTAACACTGATGGACAATTTGGGCCAGATTGGAACTGCATTAGGCTACTCTTTGGAAAGCATAACCACTTTTGTTTCGCTCGCAAGCATATGGATTTACCTTGGAGAGGTCATGTTGGGTTTTCTCTCAGAAGTCTTTATCACAAAATACAAAATCCCTAGGCCTCTTACGCTCACTGTGTCCCTCTTGGTGTCCTGCATTGGCCACCTTCTCATCGCTTTCAACGTCCCAAATGGTCTCTACGTAGCTTCAATAATCACAGGGTTTTGCTTCGGTGGACAATGGCCGTTGATTTTCGCAATCATTTCCGAGGTTTTCGGGCTTAAGCATTGCTCTACTTTGAACAATGTTGGGGTGATGGCTTGCCCACTTGGTTCATATTTGCTTAATGTGAAAGTCACAGGCTATCTTTATGATAAGGAGGCAGAGAAGCAACTGAACGCTTTAGGGTTGGAGAGGAAGCCCGGGGAGGGATTAAATTGTACTGGAGGACAATGCTACAAATTGCCCTTCCTTATAATCACCGGTGCGACAATTCTTGGTGTGTTTTTTTCCCTCATTTTGGTGCTTAGGACTTGGAAGTTTTATAACAGTGACATCTATAAGAAGTTCAAAGATGAGTCGAAAGCGGTTGAATCTGATGAGGTGGTGGCGACAAACCGGAATGTTGGACTAGTATCGAAGCCGGAAACTGAGACTGATGTAAGAAGTCCTGGAAACAACCCAGATATTCGGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1 Nodulin-like

Protein Analysis

608

Amino Acids

67.0

Weight (kDa)

8.67

Isoelectric Point (pI)

27.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nodulin-like PF06813 30 - 275 1.2e-87 Nodulin-like
NFD4_C PF23262 351 - 557 1.2e-15 NFD4, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015691)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18460 FvH4_7g18460
malus_domestica MD01G1101300.v1.1
prunus_persica Prupe.2G206500_v2.0.a1
pyrus_communis pycom01g12790
rosa_chinensis RchiOBHm_Chr1g0362271
rosa_laevigata RLG00000027660
rosa_multiflora Rmu_sc0001237.1_g000019 Rmu_ssc0000009.1_g000005
rosa_roxburghii Rroxscaffold_4G00294320 Rroxscaffold_4G00294340
rosa_rugosa Rorug01G0296500
rosa_samantha Rh1AG305500 Rh1BG268700 Rh1CG286700 Rh1DG298800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1601, 1671
AccII CGCG 1 cut(s) 474
AciI CCGC 5 cut(s) 278, 472, 474, 650, 1712
AclWI GGATC 1 cut(s) 918
AcoI YGGCCR 3 cut(s) 348, 1285, 1367
AcsI RAATTY 4 cut(s) 409, 680, 749, 882
AcvI CACGTG 1 cut(s) 447
AdeI CACNNNGTG 1 cut(s) 1065
AfaI GTAC 8 cut(s) 392, 625, 672, 713, 767, 836, 868, 1567
AfiI CCNNNNNNNGG 6 cut(s) 121, 934, 995, 1189, 1553, 1645
AflII CTTAAG 1 cut(s) 1406
AflIII ACRYGT 3 cut(s) 144, 381, 446
AgeI ACCGGT 1 cut(s) 1607
AgsI TTSAA 8 cut(s) 223, 313, 946, 1306, 1335, 1426, 1696, 1718
AhdI GACNNNNNGTC 2 cut(s) 172, 565
AhlI ACTAGT 1 cut(s) 1756
AjnI CCWGG 1 cut(s) 1795
AluBI AGCT 7 cut(s) 141, 437, 521, 602, 782, 958, 1331
AluI AGCT 7 cut(s) 141, 437, 521, 602, 782, 958, 1331
Alw21I GWGCWC 1 cut(s) 439
Alw26I GTCTC 2 cut(s) 1325, 1772
AlwI GGATC 1 cut(s) 918
Ama87I CYCGRG 1 cut(s) 1547
ApeKI GCWGC 3 cut(s) 305, 518, 779
ApoI RAATTY 4 cut(s) 409, 680, 749, 882
AsiGI ACCGGT 1 cut(s) 1607
Asp700I GAANNNNTTC 1 cut(s) 62
AspA2I CCTAGG 1 cut(s) 1241
AspS9I GGNCC 2 cut(s) 234, 1105
AsuC2I CCSGG 2 cut(s) 1548, 1549
AsuHPI GGTGA 4 cut(s) 757, 882, 1450, 1597
AsuNHI GCTAGC 1 cut(s) 340
AvaI CYCGRG 1 cut(s) 1547
AvrII CCTAGG 1 cut(s) 1241
BalI TGGCCA 1 cut(s) 1287
BanII GRGCYC 1 cut(s) 439
BbrPI CACGTG 1 cut(s) 447
Bbv12I GWGCWC 1 cut(s) 439
BbvCI CCTCAGC 1 cut(s) 598
BbvI GCAGC 3 cut(s) 317, 530, 791
BccI CCATC 4 cut(s) 115, 218, 1087, 1435
BceAI ACGGC 3 cut(s) 53, 329, 1354
BcgI CGANNNNNNTGC 2 cut(s) 341, 375
BciT130I CCWGG 1 cut(s) 1797
BciVI GTATCC 1 cut(s) 317
BclI TGATCA 1 cut(s) 720
BcnI CCSGG 2 cut(s) 1548, 1549
BcoDI GTCTC 2 cut(s) 1325, 1772
BcuI ACTAGT 1 cut(s) 1756
BfaI CTAG 5 cut(s) 126, 341, 440, 1242, 1757
BfmI CTRYAG 1 cut(s) 187
BfrI CTTAAG 1 cut(s) 1406
BfuI GTATCC 1 cut(s) 317
BglI GCCNNNNNGGC 1 cut(s) 1077
BisI GCNGC 5 cut(s) 278, 306, 475, 519, 780
BlnI CCTAGG 1 cut(s) 1241
BlsI GCNGC 5 cut(s) 279, 307, 476, 520, 781
BmcAI AGTACT 1 cut(s) 767
Bme1390I CCNGG 3 cut(s) 1548, 1549, 1797
BmeRI GACNNNNNGTC 2 cut(s) 172, 565
BmeT110I CYCGRG 1 cut(s) 1547
BmgT120I GGNCC 2 cut(s) 234, 1105
BmiI GGNNCC 1 cut(s) 235
BmrFI CCNGG 3 cut(s) 1548, 1549, 1797
BmsI GCATC 1 cut(s) 255
BmtI GCTAGC 1 cut(s) 344
BpmI CTGGAG 1 cut(s) 1590
Bpu10I CCTNAGC 2 cut(s) 598, 1652
BpuEI CTTGAG 1 cut(s) 354
BpuMI CCSGG 2 cut(s) 1548, 1549
BsaAI YACGTR 2 cut(s) 447, 1327
BsaBI GATNNNNATC 1 cut(s) 725
BsaI GGTCTC 1 cut(s) 1325
BsaWI WCCGGW 4 cut(s) 431, 988, 1607, 1743
BsaXI ACNNNNNCTCC 2 cut(s) 426, 456
Bsc4I CCNNNNNNNGG 6 cut(s) 121, 934, 995, 1189, 1553, 1645
Bse118I RCCGGY 3 cut(s) 87, 131, 1607
Bse1I ACTGG 2 cut(s) 708, 1573
Bse3DI GCAATG 1 cut(s) 1411
Bse8I GATNNNNATC 1 cut(s) 725
BseBI CCWGG 1 cut(s) 1797
BseJI GATNNNNATC 1 cut(s) 725
BseLI CCNNNNNNNGG 6 cut(s) 121, 934, 995, 1189, 1553, 1645
BseMI GCAATG 1 cut(s) 1411
BseMII CTCAG 3 cut(s) 612, 1224, 1767
BseNI ACTGG 2 cut(s) 708, 1573
BseXI GCAGC 3 cut(s) 317, 530, 791
BsgI GTGCAG 3 cut(s) 324, 537, 798
Bsh1236I CGCG 1 cut(s) 474
BshTI ACCGGT 1 cut(s) 1607
BsiHKAI GWGCWC 1 cut(s) 439
BsiHKCI CYCGRG 1 cut(s) 1547
BsiSI CCGG 8 cut(s) 88, 132, 432, 989, 1548, 1608, 1744, 1769
BslFI GGGAC 2 cut(s) 1249, 1295
BslI CCNNNNNNNGG 6 cut(s) 121, 934, 995, 1189, 1553, 1645
BsmAI GTCTC 2 cut(s) 1325, 1772
BsmFI GGGAC 2 cut(s) 1249, 1295
BsmI GAATGC 1 cut(s) 308
Bso31I GGTCTC 1 cut(s) 1325
BsoBI CYCGRG 1 cut(s) 1547
Bsp1286I GDGCHC 1 cut(s) 439
Bsp1407I TGTACA 1 cut(s) 390
Bsp143I GATC 3 cut(s) 720, 910, 993
Bsp19I CCATGG 1 cut(s) 281
BspACI CCGC 5 cut(s) 278, 472, 474, 650, 1712
BspCNI CTCAG 3 cut(s) 611, 1223, 1768
BspFNI CGCG 1 cut(s) 474
BspHI TCATGA 1 cut(s) 330
BspLI GGNNCC 1 cut(s) 235
BspOI GCTAGC 1 cut(s) 344
BspPI GGATC 1 cut(s) 918
BspTI CTTAAG 1 cut(s) 1406
BspTNI GGTCTC 1 cut(s) 1325
BsrDI GCAATG 1 cut(s) 1411
BsrFI RCCGGY 3 cut(s) 87, 131, 1607
BsrGI TGTACA 1 cut(s) 390
BsrI ACTGG 2 cut(s) 708, 1573
BssAI RCCGGY 3 cut(s) 87, 131, 1607
BssMI GATC 3 cut(s) 720, 910, 993
BssT1I CCWWGG 6 cut(s) 181, 281, 666, 1072, 1183, 1241
Bst2UI CCWGG 1 cut(s) 1797
Bst4CI ACNGT 4 cut(s) 770, 871, 1261, 1676
Bst6I CTCTTC 1 cut(s) 825
BstAFI CTTAAG 1 cut(s) 1406
BstAUI TGTACA 1 cut(s) 390
BstBAI YACGTR 2 cut(s) 447, 1327
BstC8I GCNNGC 6 cut(s) 139, 342, 1082, 1164, 1168, 1447
BstDEI CTNAG 6 cut(s) 512, 598, 852, 1210, 1652, 1776
BstDSI CCRYGG 3 cut(s) 281, 345, 472
BstENI CCTNNNNNAGG 1 cut(s) 1187
BstFNI CGCG 1 cut(s) 474
BstKTI GATC 3 cut(s) 723, 913, 996
BstMAI GTCTC 2 cut(s) 1325, 1772
BstMBI GATC 3 cut(s) 720, 910, 993
BstMWI GCNNNNNNNGC 5 cut(s) 507, 527, 796, 1077, 1252
BstNI CCWGG 1 cut(s) 1797
BstNSI RCATGY 3 cut(s) 148, 385, 1084
BstSCI CCNGG 3 cut(s) 1546, 1547, 1795
BstSFI CTRYAG 1 cut(s) 187
BstSNI TACGTA 1 cut(s) 1327
BstUI CGCG 1 cut(s) 474
BstV1I GCAGC 3 cut(s) 317, 530, 791
BsuI GTATCC 1 cut(s) 317
BtgI CCRYGG 3 cut(s) 281, 345, 472
BtgZI GCGATG 1 cut(s) 1282
BtsIMutI CAGTG 3 cut(s) 1088, 1257, 1681
Cac8I GCNNGC 6 cut(s) 139, 342, 1082, 1164, 1168, 1447
CciI TCATGA 1 cut(s) 330
Cfr10I RCCGGY 3 cut(s) 87, 131, 1607
Cfr13I GGNCC 2 cut(s) 234, 1105
Cfr42I CCGCGG 1 cut(s) 475
Cfr9I CCCGGG 1 cut(s) 1547
Csp6I GTAC 8 cut(s) 391, 624, 671, 712, 766, 835, 867, 1566
CspAI ACCGGT 1 cut(s) 1607
CviQI GTAC 8 cut(s) 391, 624, 671, 712, 766, 835, 867, 1566
DdeI CTNAG 6 cut(s) 512, 598, 852, 1210, 1652, 1776
DpnI GATC 3 cut(s) 722, 912, 995
DpnII GATC 3 cut(s) 720, 910, 993
DraIII CACNNNGTG 1 cut(s) 1065
DriI GACNNNNNGTC 2 cut(s) 172, 565
EaeI YGGCCR 3 cut(s) 348, 1285, 1367
Eam1104I CTCTTC 1 cut(s) 825
Eam1105I GACNNNNNGTC 2 cut(s) 172, 565
EarI CTCTTC 1 cut(s) 825
Ecl136II GAGCTC 1 cut(s) 437
Eco105I TACGTA 1 cut(s) 1327
Eco130I CCWWGG 6 cut(s) 181, 281, 666, 1072, 1183, 1241
Eco147I AGGCCT 2 cut(s) 510, 1246
Eco24I GRGCYC 1 cut(s) 439
Eco31I GGTCTC 1 cut(s) 1325
Eco53kI GAGCTC 1 cut(s) 437
Eco72I CACGTG 1 cut(s) 447
Eco88I CYCGRG 1 cut(s) 1547
EcoICRI GAGCTC 1 cut(s) 437
EcoNI CCTNNNNNAGG 1 cut(s) 1187
EcoRII CCWGG 1 cut(s) 1795
EcoT14I CCWWGG 6 cut(s) 181, 281, 666, 1072, 1183, 1241
EcoT38I GRGCYC 1 cut(s) 439
ErhI CCWWGG 6 cut(s) 181, 281, 666, 1072, 1183, 1241
FaqI GGGAC 2 cut(s) 1249, 1295
FauNDI CATATG 1 cut(s) 1172
FbaI TGATCA 1 cut(s) 720
Fnu4HI GCNGC 5 cut(s) 278, 306, 475, 519, 780
FriOI GRGCYC 1 cut(s) 439
Fsp4HI GCNGC 5 cut(s) 278, 306, 475, 519, 780
FspBI CTAG 5 cut(s) 126, 341, 440, 1242, 1757
GluI GCNGC 5 cut(s) 278, 306, 475, 519, 780
GsuI CTGGAG 1 cut(s) 1590
HapII CCGG 8 cut(s) 88, 132, 432, 989, 1548, 1608, 1744, 1769
HincII GTYRAC 1 cut(s) 1044
HindII GTYRAC 1 cut(s) 1044
HindIII AAGCTT 1 cut(s) 956
HinfI GANTC 3 cut(s) 896, 1703, 1718
HpaI GTTAAC 1 cut(s) 1044
HpaII CCGG 8 cut(s) 88, 132, 432, 989, 1548, 1608, 1744, 1769
HphI GGTGA 4 cut(s) 757, 882, 1450, 1597
Hpy166II GTNNAC 5 cut(s) 837, 874, 986, 1044, 1361
Hpy188I TCNGA 7 cut(s) 323, 633, 998, 1213, 1393, 1723, 1818
Hpy188III TCNNGA 1 cut(s) 331
Hpy8I GTNNAC 5 cut(s) 837, 874, 986, 1044, 1361
HpyAV CCTTC 6 cut(s) 491, 580, 634, 940, 1301, 1603
HpyCH4III ACNGT 4 cut(s) 770, 871, 1261, 1676
HpyCH4IV ACGT 3 cut(s) 446, 1308, 1326
HpyCH4V TGCA 8 cut(s) 137, 305, 518, 530, 779, 827, 1121, 1281
HpyF10VI GCNNNNNNNGC 5 cut(s) 507, 527, 796, 1077, 1252
HpyF3I CTNAG 6 cut(s) 512, 598, 852, 1210, 1652, 1776
HpySE526I ACGT 3 cut(s) 446, 1308, 1326
Ksp22I TGATCA 1 cut(s) 720
KspAI GTTAAC 1 cut(s) 1044
KspI CCGCGG 1 cut(s) 475
Kzo9I GATC 3 cut(s) 720, 910, 993
LmnI GCTCC 1 cut(s) 434
Lsp1109I GCAGC 3 cut(s) 317, 530, 791
LweI GCATC 1 cut(s) 255
MaeI CTAG 5 cut(s) 126, 341, 440, 1242, 1757
MaeII ACGT 3 cut(s) 446, 1308, 1326
MaeIII GTNAC 4 cut(s) 271, 442, 1480, 1676
MalI GATC 3 cut(s) 722, 912, 995
MboI GATC 3 cut(s) 720, 910, 993
MboII GAAGA 4 cut(s) 211, 611, 667, 842
MfeI CAATTG 1 cut(s) 297
MhlI GDGCHC 1 cut(s) 439
MlsI TGGCCA 1 cut(s) 1287
MluNI TGGCCA 1 cut(s) 1287
MlyI GAGTC 1 cut(s) 1712
MmeI TCCRAC 2 cut(s) 1515, 1732
Mox20I TGGCCA 1 cut(s) 1287
MroXI GAANNNNTTC 1 cut(s) 62
MscI TGGCCA 1 cut(s) 1287
MseI TTAA 7 cut(s) 482, 863, 1043, 1055, 1407, 1470, 1559
MslI CAYNNNNRTG 3 cut(s) 398, 1037, 1646
Msp20I TGGCCA 1 cut(s) 1287
MspA1I CMGCKG 3 cut(s) 474, 521, 782
MspCI CTTAAG 1 cut(s) 1406
MspI CCGG 8 cut(s) 88, 132, 432, 989, 1548, 1608, 1744, 1769
MspR9I CCNGG 3 cut(s) 1548, 1549, 1797
MunI CAATTG 1 cut(s) 297
Mva1269I GAATGC 1 cut(s) 308
MvaI CCWGG 1 cut(s) 1797
MvnI CGCG 1 cut(s) 474
MwoI GCNNNNNNNGC 5 cut(s) 507, 527, 796, 1077, 1252
NciI CCSGG 2 cut(s) 1548, 1549
NcoI CCATGG 1 cut(s) 281
NdeI CATATG 1 cut(s) 1172
NdeII GATC 3 cut(s) 720, 910, 993
NheI GCTAGC 1 cut(s) 340
NlaIV GGNNCC 1 cut(s) 235
NmuCI GTSAC 4 cut(s) 271, 442, 1480, 1676
NspI RCATGY 3 cut(s) 148, 385, 1084
PaeI GCATGC 1 cut(s) 1084
PagI TCATGA 1 cut(s) 330
PceI AGGCCT 2 cut(s) 510, 1246
PciI ACATGT 2 cut(s) 144, 381
PcsI WCGNNNNNNNCGW 1 cut(s) 1305
PctI GAATGC 1 cut(s) 308
PdmI GAANNNNTTC 1 cut(s) 62
PfeI GAWTC 2 cut(s) 896, 1718
PfoI TCCNGGA 1 cut(s) 1795
PinAI ACCGGT 1 cut(s) 1607
PkrI GCNGC 5 cut(s) 279, 307, 476, 520, 781
PleI GAGTC 1 cut(s) 1711
PmaCI CACGTG 1 cut(s) 447
PmlI CACGTG 1 cut(s) 447
PpsI GAGTC 1 cut(s) 1711
Ppu21I YACGTR 2 cut(s) 447, 1327
PscI ACATGT 2 cut(s) 144, 381
PsiI TTATAA 2 cut(s) 1601, 1671
Psp124BI GAGCTC 1 cut(s) 439
Psp6I CCWGG 1 cut(s) 1795
PspCI CACGTG 1 cut(s) 447
PspGI CCWGG 1 cut(s) 1795
PspN4I GGNNCC 1 cut(s) 235
PspPI GGNCC 2 cut(s) 234, 1105
PvuII CAGCTG 2 cut(s) 521, 782
RsaI GTAC 8 cut(s) 392, 625, 672, 713, 767, 836, 868, 1567
RsaNI GTAC 8 cut(s) 391, 624, 671, 712, 766, 835, 867, 1566
RseI CAYNNNNRTG 3 cut(s) 398, 1037, 1646
SacI GAGCTC 1 cut(s) 439
SacII CCGCGG 1 cut(s) 475
SaqAI TTAA 7 cut(s) 482, 863, 1043, 1055, 1407, 1470, 1559
SatI GCNGC 5 cut(s) 278, 306, 475, 519, 780
Sau3AI GATC 3 cut(s) 720, 910, 993
Sau96I GGNCC 2 cut(s) 234, 1105
ScaI AGTACT 1 cut(s) 767
SchI GAGTC 1 cut(s) 1712
ScrFI CCNGG 3 cut(s) 1548, 1549, 1797
SduI GDGCHC 1 cut(s) 439
SfaNI GCATC 1 cut(s) 255
SfcI CTRYAG 1 cut(s) 187
Sfr303I CCGCGG 1 cut(s) 475
SgrAI CRCCGGYG 1 cut(s) 1607
SgrBI CCGCGG 1 cut(s) 475
SmaI CCCGGG 1 cut(s) 1549
SmiMI CAYNNNNRTG 3 cut(s) 398, 1037, 1646
SmlI CTYRAG 2 cut(s) 369, 1406
SmoI CTYRAG 2 cut(s) 369, 1406
SnaBI TACGTA 1 cut(s) 1327
SpeI ACTAGT 1 cut(s) 1756
SphI GCATGC 1 cut(s) 1084
SseBI AGGCCT 2 cut(s) 510, 1246
SsiI CCGC 5 cut(s) 278, 472, 474, 650, 1712
SspI AATATT 2 cut(s) 662, 1026
SspMI CTAG 5 cut(s) 126, 341, 440, 1242, 1757
SstI GAGCTC 1 cut(s) 439
StuI AGGCCT 2 cut(s) 510, 1246
StyD4I CCNGG 3 cut(s) 1546, 1547, 1795
StyI CCWWGG 6 cut(s) 181, 281, 666, 1072, 1183, 1241
TaaI ACNGT 4 cut(s) 770, 871, 1261, 1676
TaiI ACGT 3 cut(s) 449, 1311, 1329
TaqI TCGA 3 cut(s) 879, 1706, 1763
TatI WGTACW 4 cut(s) 390, 765, 834, 1565
TauI GCSGC 2 cut(s) 280, 477
TfiI GAWTC 2 cut(s) 896, 1718
Tru1I TTAA 7 cut(s) 482, 863, 1043, 1055, 1407, 1470, 1559
Tru9I TTAA 7 cut(s) 482, 863, 1043, 1055, 1407, 1470, 1559
TscAI CASTG 3 cut(s) 1095, 1264, 1681
TseFI GTSAC 4 cut(s) 271, 442, 1480, 1676
TseI GCWGC 3 cut(s) 305, 518, 779
Tsp45I GTSAC 4 cut(s) 271, 442, 1480, 1676
TspDTI ATGAA 6 cut(s) 71, 319, 412, 653, 876, 1449
TspMI CCCGGG 1 cut(s) 1547
TspRI CASTG 3 cut(s) 1095, 1264, 1681
Vha464I CTTAAG 1 cut(s) 1406
XagI CCTNNNNNAGG 1 cut(s) 1187
XapI RAATTY 4 cut(s) 409, 680, 749, 882
XceI RCATGY 3 cut(s) 148, 385, 1084
XcmI CCANNNNNNNNNTGG 1 cut(s) 548
XmaI CCCGGG 1 cut(s) 1547
XmaJI CCTAGG 1 cut(s) 1241
XmnI GAANNNNTTC 1 cut(s) 62
XspI CTAG 5 cut(s) 126, 341, 440, 1242, 1757
ZrmI AGTACT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.