Nodulin-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g18460 FvH4_7g18460 |
| malus_domestica | MD01G1101300.v1.1 |
| prunus_persica | Prupe.2G206500_v2.0.a1 |
| pyrus_communis | pycom01g12790 |
| rosa_chinensis | RchiOBHm_Chr1g0362271 |
| rosa_laevigata | RLG00000027660 |
| rosa_multiflora | Rmu_sc0001237.1_g000019 Rmu_ssc0000009.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00294320 Rroxscaffold_4G00294340 |
| rosa_rugosa | Rorug01G0296500 |
| rosa_samantha | Rh1AG305500 Rh1BG268700 Rh1CG286700 Rh1DG298800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1571 |
| AatII | GACGTC | 1 cut(s) | 1803 |
| AccB1I | GGYRCC | 1 cut(s) | 197 |
| AccBSI | CCGCTC | 1 cut(s) | 703 |
| AciI | CCGC | 6 cut(s) | 628, 703, 956, 1038, 1047, 1298 |
| AcoI | YGGCCR | 2 cut(s) | 1337, 1704 |
| AcsI | RAATTY | 2 cut(s) | 644, 1432 |
| AcyI | GRCGYC | 1 cut(s) | 1800 |
| AdeI | CACNNNGTG | 1 cut(s) | 725 |
| AfaI | GTAC | 6 cut(s) | 356, 731, 832, 1202, 1545, 1620 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 250, 339, 435, 460, 965 |
| AflII | CTTAAG | 1 cut(s) | 1376 |
| AflIII | ACRYGT | 1 cut(s) | 345 |
| AgsI | TTSAA | 6 cut(s) | 187, 277, 1007, 1276, 1507, 1666 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 136 |
| AhlI | ACTAGT | 1 cut(s) | 827 |
| AleI | CACNNNNGTG | 2 cut(s) | 413, 1124 |
| Alw21I | GWGCWC | 2 cut(s) | 237, 403 |
| Alw26I | GTCTC | 2 cut(s) | 1295, 1747 |
| AoxI | GGCC | 7 cut(s) | 115, 451, 856, 1039, 1337, 1674, 1704 |
| ApeKI | GCWGC | 5 cut(s) | 269, 482, 743, 1301, 1682 |
| ApoI | RAATTY | 2 cut(s) | 644, 1432 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 26 |
| AspA2I | CCTAGG | 2 cut(s) | 1042, 1153 |
| AsuC2I | CCSGG | 1 cut(s) | 437 |
| AsuHPI | GGTGA | 3 cut(s) | 22, 530, 1250 |
| AvrII | CCTAGG | 2 cut(s) | 1042, 1153 |
| BalI | TGGCCA | 2 cut(s) | 1339, 1706 |
| BanI | GGYRCC | 1 cut(s) | 197 |
| BanII | GRGCYC | 2 cut(s) | 237, 403 |
| Bbv12I | GWGCWC | 2 cut(s) | 237, 403 |
| BbvI | GCAGC | 5 cut(s) | 281, 494, 730, 1288, 1694 |
| BccI | CCATC | 1 cut(s) | 79 |
| BceAI | ACGGC | 3 cut(s) | 293, 776, 849 |
| BciVI | GTATCC | 1 cut(s) | 1091 |
| BcnI | CCSGG | 1 cut(s) | 437 |
| BcoDI | GTCTC | 2 cut(s) | 1295, 1747 |
| BcuI | ACTAGT | 1 cut(s) | 827 |
| BfaI | CTAG | 8 cut(s) | 404, 828, 1043, 1154, 1212, 1629, 1724, 1734 |
| BfmI | CTRYAG | 3 cut(s) | 106, 747, 1639 |
| BfrI | CTTAAG | 1 cut(s) | 1376 |
| BfuI | GTATCC | 1 cut(s) | 1091 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1047 |
| BisI | GCNGC | 9 cut(s) | 270, 483, 704, 744, 1039, 1048, 1299, 1302, 1683 |
| BlnI | CCTAGG | 2 cut(s) | 1042, 1153 |
| BlsI | GCNGC | 9 cut(s) | 271, 484, 705, 745, 1040, 1049, 1300, 1303, 1684 |
| Bme1390I | CCNGG | 1 cut(s) | 437 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 136 |
| BmiI | GGNNCC | 1 cut(s) | 199 |
| BmrFI | CCNGG | 1 cut(s) | 437 |
| BmrI | ACTGGG | 3 cut(s) | 881, 1433, 1709 |
| BmuI | ACTGGG | 3 cut(s) | 881, 1433, 1709 |
| BpmI | CTGGAG | 1 cut(s) | 1599 |
| BpuEI | CTTGAG | 3 cut(s) | 44, 1778, 1779 |
| BpuMI | CCSGG | 1 cut(s) | 437 |
| Bsa29I | ATCGAT | 1 cut(s) | 846 |
| BsaHI | GRCGYC | 1 cut(s) | 1800 |
| BsaI | GGTCTC | 1 cut(s) | 1295 |
| BsaJI | CCNNGG | 4 cut(s) | 245, 436, 1042, 1153 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 250, 339, 435, 460, 965 |
| Bse118I | RCCGGY | 1 cut(s) | 604 |
| Bse1I | ACTGG | 5 cut(s) | 475, 887, 1428, 1582, 1715 |
| Bse3DI | GCAATG | 1 cut(s) | 637 |
| BseCI | ATCGAT | 1 cut(s) | 846 |
| BseDI | CCNNGG | 4 cut(s) | 245, 436, 1042, 1153 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 250, 339, 435, 460, 965 |
| BseMI | GCAATG | 1 cut(s) | 637 |
| BseMII | CTCAG | 3 cut(s) | 860, 1194, 1353 |
| BseNI | ACTGG | 5 cut(s) | 475, 887, 1428, 1582, 1715 |
| BseXI | GCAGC | 5 cut(s) | 281, 494, 730, 1288, 1694 |
| BseYI | CCCAGC | 1 cut(s) | 734 |
| BsgI | GTGCAG | 2 cut(s) | 288, 501 |
| BshFI | GGCC | 7 cut(s) | 117, 453, 858, 1041, 1339, 1676, 1706 |
| BshNI | GGYRCC | 1 cut(s) | 197 |
| BshVI | ATCGAT | 1 cut(s) | 846 |
| BsiHKAI | GWGCWC | 2 cut(s) | 237, 403 |
| BsiSI | CCGG | 2 cut(s) | 436, 605 |
| BslFI | GGGAC | 3 cut(s) | 453, 868, 1265 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 250, 339, 435, 460, 965 |
| BsmAI | GTCTC | 2 cut(s) | 1295, 1747 |
| BsmFI | GGGAC | 3 cut(s) | 453, 868, 1265 |
| BsnI | GGCC | 7 cut(s) | 117, 453, 858, 1041, 1339, 1676, 1706 |
| Bso31I | GGTCTC | 1 cut(s) | 1295 |
| Bsp1286I | GDGCHC | 2 cut(s) | 237, 403 |
| Bsp1407I | TGTACA | 1 cut(s) | 354 |
| Bsp19I | CCATGG | 1 cut(s) | 245 |
| BspACI | CCGC | 6 cut(s) | 628, 703, 956, 1038, 1047, 1298 |
| BspANI | GGCC | 7 cut(s) | 117, 453, 858, 1041, 1339, 1676, 1706 |
| BspCNI | CTCAG | 3 cut(s) | 861, 1193, 1354 |
| BspDI | ATCGAT | 1 cut(s) | 846 |
| BspHI | TCATGA | 1 cut(s) | 294 |
| BspLI | GGNNCC | 1 cut(s) | 199 |
| BspT107I | GGYRCC | 1 cut(s) | 197 |
| BspTI | CTTAAG | 1 cut(s) | 1376 |
| BspTNI | GGTCTC | 1 cut(s) | 1295 |
| BsrBI | CCGCTC | 1 cut(s) | 703 |
| BsrDI | GCAATG | 1 cut(s) | 637 |
| BsrFI | RCCGGY | 1 cut(s) | 604 |
| BsrGI | TGTACA | 1 cut(s) | 354 |
| BsrI | ACTGG | 5 cut(s) | 475, 887, 1428, 1582, 1715 |
| BssAI | RCCGGY | 1 cut(s) | 604 |
| BssECI | CCNNGG | 4 cut(s) | 245, 436, 1042, 1153 |
| BssNI | GRCGYC | 1 cut(s) | 1800 |
| BssT1I | CCWWGG | 3 cut(s) | 245, 1042, 1153 |
| Bst4CI | ACNGT | 3 cut(s) | 1289, 1335, 1699 |
| BstACI | GRCGYC | 1 cut(s) | 1800 |
| BstAFI | CTTAAG | 1 cut(s) | 1376 |
| BstAUI | TGTACA | 1 cut(s) | 354 |
| BstC8I | GCNNGC | 3 cut(s) | 103, 306, 1417 |
| BstDEI | CTNAG | 5 cut(s) | 476, 869, 1180, 1362, 1622 |
| BstDSI | CCRYGG | 1 cut(s) | 245 |
| BstEII | GGTNACC | 1 cut(s) | 1256 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 458 |
| BstMAI | GTCTC | 2 cut(s) | 1295, 1747 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 491, 740, 1044, 1047, 1597, 1682 |
| BstNSI | RCATGY | 4 cut(s) | 349, 355, 414, 1054 |
| BstPI | GGTNACC | 1 cut(s) | 1256 |
| BstSCI | CCNGG | 1 cut(s) | 435 |
| BstSFI | CTRYAG | 3 cut(s) | 106, 747, 1639 |
| BstV1I | GCAGC | 5 cut(s) | 281, 494, 730, 1288, 1694 |
| Bsu15I | ATCGAT | 1 cut(s) | 846 |
| BsuI | GTATCC | 1 cut(s) | 1091 |
| BsuRI | GGCC | 7 cut(s) | 117, 453, 858, 1041, 1339, 1676, 1706 |
| BsuTUI | ATCGAT | 1 cut(s) | 846 |
| BtgI | CCRYGG | 1 cut(s) | 245 |
| BtsI | GCAGTG | 2 cut(s) | 999, 1381 |
| BtsIMutI | CAGTG | 8 cut(s) | 468, 999, 1340, 1340, 1381, 1421, 1575, 1644 |
| Cac8I | GCNNGC | 3 cut(s) | 103, 306, 1417 |
| CciI | TCATGA | 1 cut(s) | 294 |
| Cfr10I | RCCGGY | 1 cut(s) | 604 |
| ClaI | ATCGAT | 1 cut(s) | 846 |
| CseI | GACGC | 1 cut(s) | 172 |
| Csp6I | GTAC | 6 cut(s) | 355, 730, 831, 1201, 1544, 1619 |
| CviQI | GTAC | 6 cut(s) | 355, 730, 831, 1201, 1544, 1619 |
| DdeI | CTNAG | 5 cut(s) | 476, 869, 1180, 1362, 1622 |
| DraIII | CACNNNGTG | 1 cut(s) | 725 |
| DriI | GACNNNNNGTC | 1 cut(s) | 136 |
| EaeI | YGGCCR | 2 cut(s) | 1337, 1704 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 136 |
| EciI | GGCGGA | 1 cut(s) | 945 |
| Ecl136II | GAGCTC | 2 cut(s) | 235, 401 |
| Eco130I | CCWWGG | 3 cut(s) | 245, 1042, 1153 |
| Eco147I | AGGCCT | 1 cut(s) | 453 |
| Eco24I | GRGCYC | 2 cut(s) | 237, 403 |
| Eco31I | GGTCTC | 1 cut(s) | 1295 |
| Eco32I | GATATC | 1 cut(s) | 1186 |
| Eco53kI | GAGCTC | 2 cut(s) | 235, 401 |
| Eco91I | GGTNACC | 1 cut(s) | 1256 |
| EcoICRI | GAGCTC | 2 cut(s) | 235, 401 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 458 |
| EcoO65I | GGTNACC | 1 cut(s) | 1256 |
| EcoRV | GATATC | 1 cut(s) | 1186 |
| EcoT14I | CCWWGG | 3 cut(s) | 245, 1042, 1153 |
| EcoT22I | ATGCAT | 1 cut(s) | 1253 |
| EcoT38I | GRGCYC | 2 cut(s) | 237, 403 |
| ErhI | CCWWGG | 3 cut(s) | 245, 1042, 1153 |
| FaqI | GGGAC | 3 cut(s) | 453, 868, 1265 |
| FauNDI | CATATG | 1 cut(s) | 1142 |
| Fnu4HI | GCNGC | 9 cut(s) | 270, 483, 704, 744, 1039, 1048, 1299, 1302, 1683 |
| FriOI | GRGCYC | 2 cut(s) | 237, 403 |
| Fsp4HI | GCNGC | 9 cut(s) | 270, 483, 704, 744, 1039, 1048, 1299, 1302, 1683 |
| FspBI | CTAG | 8 cut(s) | 404, 828, 1043, 1154, 1212, 1629, 1724, 1734 |
| GluI | GCNGC | 9 cut(s) | 270, 483, 704, 744, 1039, 1048, 1299, 1302, 1683 |
| GsaI | CCCAGC | 1 cut(s) | 738 |
| GsuI | CTGGAG | 1 cut(s) | 1599 |
| HaeIII | GGCC | 7 cut(s) | 117, 453, 858, 1041, 1339, 1676, 1706 |
| HapII | CCGG | 2 cut(s) | 436, 605 |
| HgaI | GACGC | 1 cut(s) | 172 |
| Hin1I | GRCGYC | 1 cut(s) | 1800 |
| HincII | GTYRAC | 2 cut(s) | 712, 1056 |
| HindII | GTYRAC | 2 cut(s) | 712, 1056 |
| HindIII | AAGCTT | 1 cut(s) | 1494 |
| HinfI | GANTC | 6 cut(s) | 27, 441, 597, 848, 940, 1766 |
| HpaI | GTTAAC | 2 cut(s) | 712, 1056 |
| HpaII | CCGG | 2 cut(s) | 436, 605 |
| HphI | GGTGA | 3 cut(s) | 22, 530, 1250 |
| Hpy166II | GTNNAC | 4 cut(s) | 712, 1056, 1227, 1331 |
| Hpy188I | TCNGA | 7 cut(s) | 587, 1080, 1183, 1266, 1363, 1395, 1805 |
| Hpy188III | TCNNGA | 3 cut(s) | 295, 1024, 1796 |
| Hpy8I | GTNNAC | 4 cut(s) | 712, 1056, 1227, 1331 |
| Hpy99I | CGWCG | 2 cut(s) | 166, 551 |
| HpyAV | CCTTC | 7 cut(s) | 16, 45, 544, 570, 1271, 1501, 1573 |
| HpyCH4III | ACNGT | 3 cut(s) | 1289, 1335, 1699 |
| HpyCH4IV | ACGT | 1 cut(s) | 1800 |
| HpyCH4V | TGCA | 6 cut(s) | 101, 269, 351, 460, 482, 1251 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 491, 740, 1044, 1047, 1597, 1682 |
| HpyF3I | CTNAG | 5 cut(s) | 476, 869, 1180, 1362, 1622 |
| HpySE526I | ACGT | 1 cut(s) | 1800 |
| Hsp92I | GRCGYC | 1 cut(s) | 1800 |
| KspAI | GTTAAC | 2 cut(s) | 712, 1056 |
| LmnI | GCTCC | 2 cut(s) | 398, 1580 |
| Lsp1109I | GCAGC | 5 cut(s) | 281, 494, 730, 1288, 1694 |
| MaeI | CTAG | 8 cut(s) | 404, 828, 1043, 1154, 1212, 1629, 1724, 1734 |
| MaeII | ACGT | 1 cut(s) | 1800 |
| MbiI | CCGCTC | 1 cut(s) | 703 |
| MboII | GAAGA | 5 cut(s) | 175, 430, 1180, 1525, 1794 |
| MhlI | GDGCHC | 2 cut(s) | 237, 403 |
| MlsI | TGGCCA | 2 cut(s) | 1339, 1706 |
| MluCI | AATT | 7 cut(s) | 644, 876, 921, 934, 1432, 1531, 1556 |
| MluNI | TGGCCA | 2 cut(s) | 1339, 1706 |
| MlyI | GAGTC | 1 cut(s) | 435 |
| MmeI | TCCRAC | 2 cut(s) | 911, 1699 |
| Mox20I | TGGCCA | 2 cut(s) | 1339, 1706 |
| Mph1103I | ATGCAT | 1 cut(s) | 1253 |
| MroXI | GAANNNNTTC | 1 cut(s) | 26 |
| MscI | TGGCCA | 2 cut(s) | 1339, 1706 |
| MseI | TTAA | 4 cut(s) | 711, 1055, 1377, 1529 |
| MslI | CAYNNNNRTG | 5 cut(s) | 350, 362, 413, 1007, 1124 |
| Msp20I | TGGCCA | 2 cut(s) | 1339, 1706 |
| MspA1I | CMGCKG | 1 cut(s) | 868 |
| MspCI | CTTAAG | 1 cut(s) | 1376 |
| MspI | CCGG | 2 cut(s) | 436, 605 |
| MspR9I | CCNGG | 1 cut(s) | 437 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 491, 740, 1044, 1047, 1597, 1682 |
| NciI | CCSGG | 1 cut(s) | 437 |
| NcoI | CCATGG | 1 cut(s) | 245 |
| NdeI | CATATG | 1 cut(s) | 1142 |
| NlaIV | GGNNCC | 1 cut(s) | 199 |
| NmuCI | GTSAC | 4 cut(s) | 310, 1128, 1192, 1256 |
| NsiI | ATGCAT | 1 cut(s) | 1253 |
| NspI | RCATGY | 4 cut(s) | 349, 355, 414, 1054 |
| OliI | CACNNNNGTG | 2 cut(s) | 413, 1124 |
| PagI | TCATGA | 1 cut(s) | 294 |
| PceI | AGGCCT | 1 cut(s) | 453 |
| PciI | ACATGT | 1 cut(s) | 345 |
| PdmI | GAANNNNTTC | 1 cut(s) | 26 |
| PfeI | GAWTC | 5 cut(s) | 27, 597, 848, 940, 1766 |
| PkrI | GCNGC | 9 cut(s) | 271, 484, 705, 745, 1040, 1049, 1300, 1303, 1684 |
| PleI | GAGTC | 1 cut(s) | 435 |
| PpsI | GAGTC | 1 cut(s) | 435 |
| PscI | ACATGT | 1 cut(s) | 345 |
| PsiI | TTATAA | 1 cut(s) | 1571 |
| Psp124BI | GAGCTC | 2 cut(s) | 237, 403 |
| PspEI | GGTNACC | 1 cut(s) | 1256 |
| PspFI | CCCAGC | 1 cut(s) | 734 |
| PspN4I | GGNNCC | 1 cut(s) | 199 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1646, 1678 |
| PvuII | CAGCTG | 1 cut(s) | 868 |
| RsaI | GTAC | 6 cut(s) | 356, 731, 832, 1202, 1545, 1620 |
| RsaNI | GTAC | 6 cut(s) | 355, 730, 831, 1201, 1544, 1619 |
| RseI | CAYNNNNRTG | 5 cut(s) | 350, 362, 413, 1007, 1124 |
| SacI | GAGCTC | 2 cut(s) | 237, 403 |
| SaqAI | TTAA | 4 cut(s) | 711, 1055, 1377, 1529 |
| SatI | GCNGC | 9 cut(s) | 270, 483, 704, 744, 1039, 1048, 1299, 1302, 1683 |
| SchI | GAGTC | 1 cut(s) | 435 |
| ScrFI | CCNGG | 1 cut(s) | 437 |
| SduI | GDGCHC | 2 cut(s) | 237, 403 |
| SfcI | CTRYAG | 3 cut(s) | 106, 747, 1639 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 350, 362, 413, 1007, 1124 |
| SmlI | CTYRAG | 4 cut(s) | 59, 1376, 1757, 1794 |
| SmoI | CTYRAG | 4 cut(s) | 59, 1376, 1757, 1794 |
| SpeI | ACTAGT | 1 cut(s) | 827 |
| Sse9I | AATT | 7 cut(s) | 644, 876, 921, 934, 1432, 1531, 1556 |
| SseBI | AGGCCT | 1 cut(s) | 453 |
| SsiI | CCGC | 6 cut(s) | 628, 703, 956, 1038, 1047, 1298 |
| SspI | AATATT | 2 cut(s) | 805, 1402 |
| SspMI | CTAG | 8 cut(s) | 404, 828, 1043, 1154, 1212, 1629, 1724, 1734 |
| SstI | GAGCTC | 2 cut(s) | 237, 403 |
| StuI | AGGCCT | 1 cut(s) | 453 |
| StyD4I | CCNGG | 1 cut(s) | 435 |
| StyI | CCWWGG | 3 cut(s) | 245, 1042, 1153 |
| TaaI | ACNGT | 3 cut(s) | 1289, 1335, 1699 |
| TaiI | ACGT | 1 cut(s) | 1803 |
| TaqI | TCGA | 2 cut(s) | 820, 846 |
| TasI | AATT | 7 cut(s) | 644, 876, 921, 934, 1432, 1531, 1556 |
| TatI | WGTACW | 2 cut(s) | 354, 1200 |
| TauI | GCSGC | 4 cut(s) | 706, 1041, 1050, 1301 |
| TfiI | GAWTC | 5 cut(s) | 27, 597, 848, 940, 1766 |
| Tru1I | TTAA | 4 cut(s) | 711, 1055, 1377, 1529 |
| Tru9I | TTAA | 4 cut(s) | 711, 1055, 1377, 1529 |
| TscAI | CASTG | 8 cut(s) | 475, 999, 1340, 1347, 1388, 1428, 1582, 1651 |
| TseFI | GTSAC | 4 cut(s) | 310, 1128, 1192, 1256 |
| TseI | GCWGC | 5 cut(s) | 269, 482, 743, 1301, 1682 |
| Tsp45I | GTSAC | 4 cut(s) | 310, 1128, 1192, 1256 |
| TspDTI | ATGAA | 6 cut(s) | 35, 283, 376, 840, 1555, 1707 |
| TspRI | CASTG | 8 cut(s) | 475, 999, 1340, 1347, 1388, 1428, 1582, 1651 |
| Vha464I | CTTAAG | 1 cut(s) | 1376 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 458 |
| XapI | RAATTY | 2 cut(s) | 644, 1432 |
| XceI | RCATGY | 4 cut(s) | 349, 355, 414, 1054 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 512, 679 |
| XmaJI | CCTAGG | 2 cut(s) | 1042, 1153 |
| XmnI | GAANNNNTTC | 1 cut(s) | 26 |
| XspI | CTAG | 8 cut(s) | 404, 828, 1043, 1154, 1212, 1629, 1724, 1734 |
| ZraI | GACGTC | 1 cut(s) | 1801 |
| Zsp2I | ATGCAT | 1 cut(s) | 1253 |