Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0009554

Physical Location & Seq

Genomic Coordinates Forward (+)

30048209 .. 30053679

Gene Structure 5471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1205100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGAACATAACCTTAGAATTTTCTTTAAAATTCCATTTAATATATTTATTTTCATTTATTTTATTTTATTTTTTCCTTTTACTGCAAAGGGTTCCCTTCCTTCTCTTCCATCTCTCGCCTTTATATTTTCTCCTTACGAACTCTCTCACTGTCTCCGTTCACCTTCGGCTTGTCAATTTCTTGCATTTTCTCGGCGATTTTCCTTCCCGCCAAACACTCCGAATCTCCCTCCCGCCTGCTCCGATTCCCGCAGATATCCCGACGTCCTCCCTGTTCTTGAACCGATCTCTGCTCGCGCCTCCACTGACATCTGGTGGATTTGTATTTCTGATGTCAATTGCAAAACCTACGACCTCAGACTCTCTGTATGCTATGAAATCAGAGGAGGAAAATGATTCCCTTGACACTATCATTGGACAAGTTGCGAAAGAGCCATCTATTTCTTTCTCAAGGGCCGGGGATAGCCCAGTCCCGTGGATTCAGCTACTTCATGCCTTAGATCAACAAGAACTTCCAGGTTGGCCCCTGCACTCTCCTATTAAAGTGCAGATGCAAAAGTGTGACAAATGCCCACGAGAGTTTTGCTCATCCATCAACTACAGAAGACACATACGTGTACGCCATCGGTTGAAAAAGCTTGATAAGGATTCTTCTAAAAATAGGGAGCTTCTACGTGAATTTTGGGACAAGCTCTCGCCAGAAGAGGCAAAAGAAGCTGTATCATTCAATAATGTGACTTTGGAGGAAGTTCCAGGGTCTTCAATTATAAAGGCATTGACAATACTTATAAGGAAACCGGGATTTTCTTCTTTGCCTCACGTTTGTTTGAAGGCTGGTCCTGCCCTTCTGGATATTGTTCAAGCTAGACCTTCCAGATTTCCCATATCATCCCAGGAGTTATTCTCTATCCTCGATGATGCAAGTGAAAAGACGTTTCTGTGTGGGACAGCCATATCAATGCAGAGATATGTTTTTGATGGAGAGGCTGGGAAAATTGGCCTTGAATCAAAAAACTTAGTTGCTTGTACAAGCTTCCTGGTGGAACAGATATTGTTGAAAGCCTGGCATGCTGACAAGGATGCGGAAGCTTTGAGGTTACAGAAGTTGCTAGTGGAGGAAGAAGAAGCTGCTCAAAGAAGGCAAGAAGAGCTCTTGGAAAGGAAAAGGCAGAAGAAGCTTAGGCAGAAAGAACAGAAGGAAAAGGATCAAGGACATGGGGAGAAGGTTGATGTTAAGGAGAACATTGATGAAACTCTGGAGGCTGTGCCACTCGTAGAAACATCTAGTCCTTCAGCAACATTTGATTCTGACACGGCCAGTTCGGATGTGCTGGATCATGTCTGCTTATCACTTGAACCATTCCATTTCTCAAATACGGATGAAAATGCAGATCTCGAATCTCAGACTGGAGTTAGCGTTGGACATGTTGATTCGGCGAGTGGACCAAATGTTGAACGGCGGGTGGTGCAAGGAAATGGTAGTCGGCGTGCAGTTGCTCGATGGCACATGTCTCCAAAATCACAGCGGTGTGTGCCCAATGGATTTCATGGAGGCCATAGTTCTCAAACAGCGAAGCATTCATCCATACACCACCACGGTAACCACAGGGATGTAAGGGCTGCTTCCAGTGGCAATAGAGTATGGAGTCGAAAGCCCAAACCAGAATATGATGGGGGGAGTTTGAAAGCTGGAGTACAGGAAGAAGCATCTGAACCAGATCAAATCAAGAACCATGAGGTTTTGATTGGTTCTATACCAGTCAATCTTGGAAATTTTTGCCAGGAAAGTAATAATCTGGCTGGTGTTCATGATGACTGTCTTTCGGAGAAAGGTCAAATGCTAAAGGACAATCTTCAGGATAAAACCAATAAACCTGATCTGGTACAGAGTGGCACAAACCGGTCAACAGTGAAGCTTTGGAGGCCAGTGAGCCGGAATGGAACAAAAGGTCCTACGCCAATTCAGAATGGCAGCAAAGAATCTGACATAAATGTGGTAGCTGAAAAGGGCAACAGCCAAAGCCCTTACAGTGAAAATTGTAAAAGATCGTGTGTTGTGGATGGCCATAATGATGGAAACGGGAACGGCTCTACTCACCCCGATGAAACACAAAGCCTGGGCTTCTGTAGCCGTGCGGCAGAAGATTTTCTTGCACAGAGATGGAAGGAGGCTATTGCTGCAGATCATGTGGAATTGGTTCTATTCCAAGACTCCGAACCTCCCAGATGCCCAGACAATCAAAATGACGGTGAAGTAGGAGCGAATCATTTGTTGAAGTCTAAACACAGCATTCTTGGCAATGCGGAAAACAGGCTTGTAGATGGGGAGGCATTTGATTTGCCAACTGCTGGAGCTGCTAAAGTCAGGCGCAGGACGAAGCATGACAAGGGTGTGAAGGTTAAGTACATTCCGAAACATAGCACAGTTGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

811

Amino Acids

90.09

Weight (kDa)

6.79

Isoelectric Point (pI)

49.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25610 AT4G25610 AT4G25610
fragaria_vesca	FvH4_7g29860 FvH4_7g29860 FvH4_7g29860 FvH4_7g29860
malus_domestica	MD01G1205100.v1.1 MD07G1273500.v1.1
prunus_persica	Prupe.2G297500_v2.0.a1
pyrus_communis	pycom01g21470 pycom07g25010
rosa_chinensis	RchiOBHm_Chr1g0377821
rosa_laevigata	RLG00000026495
rosa_multiflora	Rmu_sc0004824.1_g000006
rosa_roxburghii	Rroxscaffold_4G00281030
rosa_rugosa	Rorug01G0405300
rosa_samantha	Rh1AG427000 Rh1BG382300 Rh1CG396200 Rh1DG413300
rosa_wichuraiana	Rw1G037160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	767, 788
AatII	GACGTC	1 cut(s)	266
AccB7I	CCANNNNNTGG	1 cut(s)	2348
AccII	CGCG	1 cut(s)	296
AciI	CCGC	8 cut(s)	208, 233, 249, 1082, 1459, 1525, 2135, 2303
AclWI	GGATC	2 cut(s)	1212, 1341
AcoI	YGGCCR	2 cut(s)	1314, 2062
AcsI	RAATTY	4 cut(s)	17, 29, 677, 1771
AcuI	CTGAAG	2 cut(s)	1275, 1838
AcyI	GRCGYC	1 cut(s)	263
AfaI	GTAC	5 cut(s)	618, 1027, 1695, 1884, 2405
AfiI	CCNNNNNNNGG	1 cut(s)	2348
AflIII	ACRYGT	3 cut(s)	613, 1423, 1506
AgeI	ACCGGT	1 cut(s)	1899
AjnI	CCWGG	7 cut(s)	514, 751, 891, 1035, 1061, 1779, 2115
AleI	CACNNNNGTG	2 cut(s)	612, 1525
AloI	GAACNNNNNNTCC	2 cut(s)	1933, 1965
Alw21I	GWGCWC	1 cut(s)	1152
Alw26I	GTCTC	2 cut(s)	157, 1515
AlwI	GGATC	2 cut(s)	1212, 1341
AoxI	GGCC	7 cut(s)	453, 521, 997, 1314, 1552, 1922, 2062
ApeKI	GCWGC	5 cut(s)	1127, 1619, 1971, 2177, 2354
ApoI	RAATTY	4 cut(s)	17, 29, 677, 1771
AsiGI	ACCGGT	1 cut(s)	1899
Asp700I	GAANNNNTTC	2 cut(s)	2145, 2196
AspLEI	GCGC	2 cut(s)	298, 2370
AspS9I	GGNCC	5 cut(s)	453, 522, 836, 1442, 1949
AsuC2I	CCSGG	2 cut(s)	457, 798
AsuHPI	GGTGA	3 cut(s)	152, 2087, 2261
AvaII	GGWCC	3 cut(s)	836, 1442, 1949
BaeGI	GKGCMC	1 cut(s)	1536
BalI	TGGCCA	1 cut(s)	2064
BanII	GRGCYC	1 cut(s)	1152
BarI	GAAGNNNNNNTAC	2 cut(s)	2387, 2419
BauI	CACGAG	1 cut(s)	573
BbsI	GAAGAC	2 cut(s)	610, 750
Bbv12I	GWGCWC	1 cut(s)	1152
BbvI	GCAGC	5 cut(s)	1114, 1606, 1983, 2164, 2341
BceAI	ACGGC	4 cut(s)	1329, 1472, 2101, 2115
BcgI	CGANNNNNNTGC	2 cut(s)	564, 598
BciT130I	CCWGG	7 cut(s)	516, 753, 893, 1037, 1063, 1781, 2117
BcnI	CCSGG	2 cut(s)	457, 798
BcoDI	GTCTC	2 cut(s)	157, 1515
BfaI	CTAG	4 cut(s)	864, 1109, 1284, 2431
BfmI	CTRYAG	3 cut(s)	598, 2125, 2178
BglII	AGATCT	1 cut(s)	1390
BisI	GCNGC	6 cut(s)	1128, 1620, 1972, 2136, 2178, 2355
BlsI	GCNGC	6 cut(s)	1129, 1621, 1973, 2137, 2179, 2356
Bme1390I	CCNGG	9 cut(s)	457, 516, 753, 798, 893, 1037, 1063, 1781, 2117
Bme18I	GGWCC	3 cut(s)	836, 1442, 1949
BmgT120I	GGNCC	5 cut(s)	453, 522, 836, 1442, 1949
BmiI	GGNNCC	2 cut(s)	93, 524
BmrFI	CCNGG	9 cut(s)	457, 516, 753, 798, 893, 1037, 1063, 1781, 2117
BmrI	ACTGGG	1 cut(s)	461
BmsI	GCATC	5 cut(s)	540, 907, 1069, 1715, 2216
BmuI	ACTGGG	1 cut(s)	461
BpiI	GAAGAC	2 cut(s)	610, 750
BplI	GAGNNNNNCTC	4 cut(s)	569, 601, 887, 919
BpmI	CTGGAG	4 cut(s)	1277, 1428, 1710, 2370
Bpu10I	CCTNAGC	1 cut(s)	1178
BpuEI	CTTGAG	1 cut(s)	433
BpuMI	CCSGG	2 cut(s)	457, 798
BsaAI	YACGTR	2 cut(s)	614, 674
BsaHI	GRCGYC	1 cut(s)	263
BsaJI	CCNNGG	6 cut(s)	456, 473, 752, 891, 1594, 2116
BsaWI	WCCGGW	1 cut(s)	1899
BsaXI	ACNNNNNCTCC	2 cut(s)	1401, 1431
Bsc4I	CCNNNNNNNGG	1 cut(s)	2348
Bse118I	RCCGGY	1 cut(s)	1899
Bse1I	ACTGG	6 cut(s)	467, 1317, 1411, 1626, 1757, 1925
Bse3DI	GCAATG	1 cut(s)	2305
BseBI	CCWGG	7 cut(s)	516, 753, 893, 1037, 1063, 1781, 2117
BseDI	CCNNGG	6 cut(s)	456, 473, 752, 891, 1594, 2116
BseGI	GGATG	8 cut(s)	587, 887, 1084, 1330, 1384, 1580, 1615, 2065
BseLI	CCNNNNNNNGG	1 cut(s)	2348
BseMI	GCAATG	1 cut(s)	2305
BseMII	CTCAG	2 cut(s)	369, 1415
BseNI	ACTGG	6 cut(s)	467, 1317, 1411, 1626, 1757, 1925
BseRI	GAGGAG	1 cut(s)	398
BseSI	GKGCMC	1 cut(s)	1536
BseXI	GCAGC	5 cut(s)	1114, 1606, 1983, 2164, 2341
BseYI	CCCAGC	1 cut(s)	986
BsgI	GTGCAG	3 cut(s)	512, 566, 1509
Bsh1236I	CGCG	1 cut(s)	296
BshFI	GGCC	7 cut(s)	455, 523, 999, 1316, 1554, 1924, 2064
BshTI	ACCGGT	1 cut(s)	1899
BsiHKAI	GWGCWC	1 cut(s)	1152
BsiSI	CCGG	4 cut(s)	456, 797, 1900, 1933
BslFI	GGGAC	3 cut(s)	455, 698, 958
BslI	CCNNNNNNNGG	1 cut(s)	2348
BsmAI	GTCTC	2 cut(s)	157, 1515
BsmFI	GGGAC	3 cut(s)	455, 698, 958
BsmI	GAATGC	2 cut(s)	1576, 2289
BsnI	GGCC	7 cut(s)	455, 523, 999, 1316, 1554, 1924, 2064
Bsp1286I	GDGCHC	2 cut(s)	1152, 1536
Bsp1407I	TGTACA	1 cut(s)	1025
Bsp143I	GATC	9 cut(s)	284, 499, 1204, 1333, 1390, 1717, 1876, 2045, 2182
BspACI	CCGC	8 cut(s)	208, 233, 249, 1082, 1459, 1525, 2135, 2303
BspANI	GGCC	7 cut(s)	455, 523, 999, 1316, 1554, 1924, 2064
BspCNI	CTCAG	2 cut(s)	368, 1414
BspFNI	CGCG	1 cut(s)	296
BspHI	TCATGA	1 cut(s)	1807
BspLI	GGNNCC	2 cut(s)	93, 524
BspMAI	CTGCAG	1 cut(s)	2182
BspPI	GGATC	2 cut(s)	1212, 1341
BspQI	GCTCTTC	1 cut(s)	1140
BsrDI	GCAATG	1 cut(s)	2305
BsrFI	RCCGGY	1 cut(s)	1899
BsrGI	TGTACA	1 cut(s)	1025
BsrI	ACTGG	6 cut(s)	467, 1317, 1411, 1626, 1757, 1925
BssAI	RCCGGY	1 cut(s)	1899
BssECI	CCNNGG	6 cut(s)	456, 473, 752, 891, 1594, 2116
BssMI	GATC	9 cut(s)	284, 499, 1204, 1333, 1390, 1717, 1876, 2045, 2182
BssNI	GRCGYC	1 cut(s)	263
BssSI	CACGAG	1 cut(s)	573
Bst2BI	CACGAG	1 cut(s)	573
Bst2UI	CCWGG	7 cut(s)	516, 753, 893, 1037, 1063, 1781, 2117
Bst4CI	ACNGT	7 cut(s)	151, 1598, 1817, 1909, 2030, 2249, 2425
Bst6I	CTCTTC	3 cut(s)	110, 696, 1140
BstACI	GRCGYC	1 cut(s)	263
BstAUI	TGTACA	1 cut(s)	1025
BstBAI	YACGTR	2 cut(s)	614, 674
BstC8I	GCNNGC	4 cut(s)	237, 294, 1068, 1488
BstDEI	CTNAG	6 cut(s)	13, 355, 496, 1015, 1178, 1401
BstDSI	CCRYGG	2 cut(s)	473, 1594
BstEII	GGTNACC	1 cut(s)	1598
BstF5I	GGATG	8 cut(s)	587, 887, 1084, 1330, 1384, 1580, 1615, 2065
BstFNI	CGCG	1 cut(s)	296
BstHHI	GCGC	2 cut(s)	298, 2370
BstKTI	GATC	9 cut(s)	287, 502, 1207, 1336, 1393, 1720, 1879, 2048, 2185
BstMAI	GTCTC	2 cut(s)	157, 1515
BstMBI	GATC	9 cut(s)	284, 499, 1204, 1333, 1390, 1717, 1876, 2045, 2182
BstNI	CCWGG	7 cut(s)	516, 753, 893, 1037, 1063, 1781, 2117
BstNSI	RCATGY	3 cut(s)	1070, 1427, 1510
BstPI	GGTNACC	1 cut(s)	1598
BstSCI	CCNGG	9 cut(s)	455, 514, 751, 796, 891, 1035, 1061, 1779, 2115
BstSFI	CTRYAG	3 cut(s)	598, 2125, 2178
BstSLI	GKGCMC	1 cut(s)	1536
BstUI	CGCG	1 cut(s)	296
BstV1I	GCAGC	5 cut(s)	1114, 1606, 1983, 2164, 2341
BstV2I	GAAGAC	2 cut(s)	610, 750
BstX2I	RGATCY	1 cut(s)	1390
BstXI	CCANNNNNNTGG	2 cut(s)	474, 2072
BstYI	RGATCY	1 cut(s)	1390
BsuRI	GGCC	7 cut(s)	455, 523, 999, 1316, 1554, 1924, 2064
BtgI	CCRYGG	2 cut(s)	473, 1594
BtsCI	GGATG	8 cut(s)	587, 887, 1084, 1330, 1384, 1580, 1615, 2065
BtsIMutI	CAGTG	6 cut(s)	147, 302, 1633, 1914, 1932, 2035
Cac8I	GCNNGC	4 cut(s)	237, 294, 1068, 1488
CciI	TCATGA	1 cut(s)	1807
CfoI	GCGC	2 cut(s)	298, 2370
Cfr10I	RCCGGY	1 cut(s)	1899
Cfr13I	GGNCC	5 cut(s)	453, 522, 836, 1442, 1949
Csp6I	GTAC	5 cut(s)	617, 1026, 1694, 1883, 2404
CspAI	ACCGGT	1 cut(s)	1899
CviQI	GTAC	5 cut(s)	617, 1026, 1694, 1883, 2404
DdeI	CTNAG	6 cut(s)	13, 355, 496, 1015, 1178, 1401
DpnI	GATC	9 cut(s)	286, 501, 1206, 1335, 1392, 1719, 1878, 2047, 2184
DpnII	GATC	9 cut(s)	284, 499, 1204, 1333, 1390, 1717, 1876, 2045, 2182
DraI	TTTAAA	1 cut(s)	27
EaeI	YGGCCR	2 cut(s)	1314, 2062
Eam1104I	CTCTTC	3 cut(s)	110, 696, 1140
EarI	CTCTTC	3 cut(s)	110, 696, 1140
Ecl136II	GAGCTC	1 cut(s)	1150
Eco24I	GRGCYC	1 cut(s)	1152
Eco32I	GATATC	1 cut(s)	256
Eco47I	GGWCC	3 cut(s)	836, 1442, 1949
Eco53kI	GAGCTC	1 cut(s)	1150
Eco57I	CTGAAG	2 cut(s)	1275, 1838
Eco91I	GGTNACC	1 cut(s)	1598
EcoICRI	GAGCTC	1 cut(s)	1150
EcoO109I	RGGNCCY	1 cut(s)	1949
EcoO65I	GGTNACC	1 cut(s)	1598
EcoRII	CCWGG	7 cut(s)	514, 751, 891, 1035, 1061, 1779, 2115
EcoRV	GATATC	1 cut(s)	256
EcoT38I	GRGCYC	1 cut(s)	1152
FalI	AAGNNNNNCTT	4 cut(s)	1606, 1638, 2133, 2165
FaqI	GGGAC	3 cut(s)	455, 698, 958
FauI	CCCGC	4 cut(s)	215, 240, 256, 1452
Fnu4HI	GCNGC	6 cut(s)	1128, 1620, 1972, 2136, 2178, 2355
FokI	GGATG	8 cut(s)	574, 874, 1091, 1337, 1391, 1567, 1622, 2072
FriOI	GRGCYC	1 cut(s)	1152
Fsp4HI	GCNGC	6 cut(s)	1128, 1620, 1972, 2136, 2178, 2355
FspBI	CTAG	4 cut(s)	864, 1109, 1284, 2431
GlaI	GCGC	2 cut(s)	297, 2369
GluI	GCNGC	6 cut(s)	1128, 1620, 1972, 2136, 2178, 2355
GsaI	CCCAGC	1 cut(s)	990
GsuI	CTGGAG	4 cut(s)	1277, 1428, 1710, 2370
HaeIII	GGCC	7 cut(s)	455, 523, 999, 1316, 1554, 1924, 2064
HapII	CCGG	4 cut(s)	456, 797, 1900, 1933
HhaI	GCGC	2 cut(s)	298, 2370
Hin1I	GRCGYC	1 cut(s)	263
Hin6I	GCGC	2 cut(s)	296, 2368
HinP1I	GCGC	2 cut(s)	296, 2368
HincII	GTYRAC	1 cut(s)	1905
HindII	GTYRAC	1 cut(s)	1905
HindIII	AAGCTT	5 cut(s)	635, 1030, 1086, 1175, 1913
HpaII	CCGG	4 cut(s)	456, 797, 1900, 1933
HphI	GGTGA	3 cut(s)	152, 2087, 2261
Hpy166II	GTNNAC	4 cut(s)	160, 617, 1442, 1905
Hpy188III	TCNNGA	9 cut(s)	259, 277, 848, 873, 1256, 1394, 1726, 1808, 1856
Hpy8I	GTNNAC	4 cut(s)	160, 617, 1442, 1905
Hpy99I	CGWCG	1 cut(s)	265
HpyCH4III	ACNGT	7 cut(s)	151, 1598, 1817, 1909, 2030, 2249, 2425
HpyCH4IV	ACGT	5 cut(s)	263, 613, 673, 819, 932
HpyF3I	CTNAG	6 cut(s)	13, 355, 496, 1015, 1178, 1401
HpySE526I	ACGT	5 cut(s)	263, 613, 673, 819, 932
Hsp92I	GRCGYC	1 cut(s)	263
HspAI	GCGC	2 cut(s)	296, 2368
Kzo9I	GATC	9 cut(s)	284, 499, 1204, 1333, 1390, 1717, 1876, 2045, 2182
LguI	GCTCTTC	1 cut(s)	1140
LmnI	GCTCC	4 cut(s)	244, 664, 2258, 2351
Lsp1109I	GCAGC	5 cut(s)	1114, 1606, 1983, 2164, 2341
LweI	GCATC	5 cut(s)	540, 907, 1069, 1715, 2216
MaeI	CTAG	4 cut(s)	864, 1109, 1284, 2431
MaeII	ACGT	5 cut(s)	263, 613, 673, 819, 932
MaeIII	GTNAC	4 cut(s)	560, 733, 1095, 1598
MalI	GATC	9 cut(s)	286, 501, 1206, 1335, 1392, 1719, 1878, 2047, 2184
MboI	GATC	9 cut(s)	284, 499, 1204, 1333, 1390, 1717, 1876, 2045, 2182
MfeI	CAATTG	1 cut(s)	336
MflI	RGATCY	1 cut(s)	1390
MhlI	GDGCHC	2 cut(s)	1152, 1536
MlsI	TGGCCA	1 cut(s)	2064
MluNI	TGGCCA	1 cut(s)	2064
MlyI	GAGTC	3 cut(s)	353, 1654, 2204
MmeI	TCCRAC	1 cut(s)	1399
Mox20I	TGGCCA	1 cut(s)	2064
MroXI	GAANNNNTTC	2 cut(s)	2145, 2196
MscI	TGGCCA	1 cut(s)	2064
MseI	TTAA	5 cut(s)	26, 38, 540, 1233, 2400
MslI	CAYNNNNRTG	8 cut(s)	612, 956, 1525, 1608, 1991, 2070, 2100, 2158
Msp20I	TGGCCA	1 cut(s)	2064
MspA1I	CMGCKG	1 cut(s)	1525
MspI	CCGG	4 cut(s)	456, 797, 1900, 1933
MspR9I	CCNGG	9 cut(s)	457, 516, 753, 798, 893, 1037, 1063, 1781, 2117
MunI	CAATTG	1 cut(s)	336
Mva1269I	GAATGC	2 cut(s)	1576, 2289
MvaI	CCWGG	7 cut(s)	516, 753, 893, 1037, 1063, 1781, 2117
MvnI	CGCG	1 cut(s)	296
NciI	CCSGG	2 cut(s)	457, 798
NdeII	GATC	9 cut(s)	284, 499, 1204, 1333, 1390, 1717, 1876, 2045, 2182
NlaIV	GGNNCC	2 cut(s)	93, 524
NmeAIII	GCCGAG	1 cut(s)	171
NmuCI	GTSAC	2 cut(s)	560, 733
NspI	RCATGY	3 cut(s)	1070, 1427, 1510
OliI	CACNNNNGTG	2 cut(s)	612, 1525
PaeI	GCATGC	1 cut(s)	1070
PagI	TCATGA	1 cut(s)	1807
PciI	ACATGT	2 cut(s)	1423, 1506
PciSI	GCTCTTC	1 cut(s)	1140
PctI	GAATGC	2 cut(s)	1576, 2289
PdmI	GAANNNNTTC	2 cut(s)	2145, 2196
PflMI	CCANNNNNTGG	1 cut(s)	2348
PinAI	ACCGGT	1 cut(s)	1899
PkrI	GCNGC	6 cut(s)	1129, 1621, 1973, 2137, 2179, 2356
PleI	GAGTC	3 cut(s)	353, 1653, 2204
PpsI	GAGTC	3 cut(s)	353, 1653, 2204
Ppu21I	YACGTR	2 cut(s)	614, 674
PpuMI	RGGWCCY	1 cut(s)	1949
PscI	ACATGT	2 cut(s)	1423, 1506
PsiI	TTATAA	2 cut(s)	767, 788
Psp124BI	GAGCTC	1 cut(s)	1152
Psp5II	RGGWCCY	1 cut(s)	1949
Psp6I	CCWGG	7 cut(s)	514, 751, 891, 1035, 1061, 1779, 2115
PspEI	GGTNACC	1 cut(s)	1598
PspFI	CCCAGC	1 cut(s)	986
PspGI	CCWGG	7 cut(s)	514, 751, 891, 1035, 1061, 1779, 2115
PspN4I	GGNNCC	2 cut(s)	93, 524
PspPI	GGNCC	5 cut(s)	453, 522, 836, 1442, 1949
PspPPI	RGGWCCY	1 cut(s)	1949
PstI	CTGCAG	1 cut(s)	2182
PsuI	RGATCY	1 cut(s)	1390
RsaI	GTAC	5 cut(s)	618, 1027, 1695, 1884, 2405
RsaNI	GTAC	5 cut(s)	617, 1026, 1694, 1883, 2404
RseI	CAYNNNNRTG	8 cut(s)	612, 956, 1525, 1608, 1991, 2070, 2100, 2158
SacI	GAGCTC	1 cut(s)	1152
SapI	GCTCTTC	1 cut(s)	1140
SaqAI	TTAA	5 cut(s)	26, 38, 540, 1233, 2400
SatI	GCNGC	6 cut(s)	1128, 1620, 1972, 2136, 2178, 2355
Sau3AI	GATC	9 cut(s)	284, 499, 1204, 1333, 1390, 1717, 1876, 2045, 2182
Sau96I	GGNCC	5 cut(s)	453, 522, 836, 1442, 1949
SchI	GAGTC	3 cut(s)	353, 1654, 2204
ScrFI	CCNGG	9 cut(s)	457, 516, 753, 798, 893, 1037, 1063, 1781, 2117
SduI	GDGCHC	2 cut(s)	1152, 1536
SfaNI	GCATC	5 cut(s)	540, 907, 1069, 1715, 2216
SfcI	CTRYAG	3 cut(s)	598, 2125, 2178
SinI	GGWCC	3 cut(s)	836, 1442, 1949
SmiMI	CAYNNNNRTG	8 cut(s)	612, 956, 1525, 1608, 1991, 2070, 2100, 2158
SmlI	CTYRAG	1 cut(s)	448
SmoI	CTYRAG	1 cut(s)	448
SphI	GCATGC	1 cut(s)	1070
SsiI	CCGC	8 cut(s)	208, 233, 249, 1082, 1459, 1525, 2135, 2303
SspMI	CTAG	4 cut(s)	864, 1109, 1284, 2431
SstI	GAGCTC	1 cut(s)	1152
StyD4I	CCNGG	9 cut(s)	455, 514, 751, 796, 891, 1035, 1061, 1779, 2115
TaaI	ACNGT	7 cut(s)	151, 1598, 1817, 1909, 2030, 2249, 2425
TaiI	ACGT	5 cut(s)	266, 616, 676, 822, 935
TaqI	TCGA	4 cut(s)	912, 1395, 1498, 1648
TatI	WGTACW	3 cut(s)	1025, 1693, 2403
TauI	GCSGC	1 cut(s)	2138
Tru1I	TTAA	5 cut(s)	26, 38, 540, 1233, 2400
Tru9I	TTAA	5 cut(s)	26, 38, 540, 1233, 2400
TscAI	CASTG	6 cut(s)	154, 309, 1633, 1914, 1932, 2035
TseFI	GTSAC	2 cut(s)	560, 733
TseI	GCWGC	5 cut(s)	1127, 1619, 1971, 2177, 2354
Tsp45I	GTSAC	2 cut(s)	560, 733
TspGWI	ACGGA	2 cut(s)	145, 1391
TspRI	CASTG	6 cut(s)	154, 309, 1633, 1914, 1932, 2035
Van91I	CCANNNNNTGG	1 cut(s)	2348
VpaK11BI	GGWCC	3 cut(s)	836, 1442, 1949
XapI	RAATTY	4 cut(s)	17, 29, 677, 1771
XceI	RCATGY	3 cut(s)	1070, 1427, 1510
XmnI	GAANNNNTTC	2 cut(s)	2145, 2196
XspI	CTAG	4 cut(s)	864, 1109, 1284, 2431
ZraI	GACGTC	1 cut(s)	264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.