MD02G1003700.v1.1

Acyl-coenzyme A thioesterase 9, mitochondrial-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
262188 .. 265058
2871 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1003700.v1.1.491

Sequence Viewer

Length: 1542 bp
ATGACACCACTCAGAAAACCACTTCCCCACCTCCTCTTCACCCCCAAATCCAAATCTTCATCCTTCCAATCACTCGCCTCCTACTTCACTCTCACTCCAAATCTTCATCCTTCCTCACCACACCCGCCTGAATCACCCACTACCCGCATACCAAATCCACCACAACAGCCAAAACCCACCTTCAAGATCCCACCTTTCTTTCCTATTCCCCCGCCATTCACTCACACCAGGTCCTTCTCAACCGCAAATTCCGACCCTTCTCAGCCAATCCCGGTTGTTTCCACCGTGACTTCGCCCCACGACAGTTCGCAGCCCATCGATGCAGGCTCTTCTATTCGAAAACCGATCAGTTTATGGCCTGGAATGTACAGTTCCCCTGTCACAAATGCTCTGTGGGAAGCGAGATCAAGGATGTACGGGGACGCATCGGGTGACGCGCCTCCGCAGAGTGAATTGGTGGCGAGGACTCCGGCGCAGAGTCGGACCAGTATTCTGTACAAGTTTTCGTCTGATTATAAACTGAGAGAGCAGTACAGGAACCCCTGGAATGGGATTAGAATGGGGAAGTTGCTTGAGGATCTCGATGCTCTTGCTGGAACCATTGCATTCAAGCATTGCTGCAATGAAGATGGCACAACAAGGCCTCTGCTACTGGTGACTGCTTCTGTTGACAAGATGGTTTTGAAAAAACCTATCCTTGTCGACACTGATTTGAATATAGGTGGCGCTGTCATATGGGTTGGGAAGTCATCCATGGAAATTCAGCTGGAAGTGACTCAATCGTTGCAGGGATCCTCATACCCATCAGAGTCCATTGCTCTTACAGCAAACTTCACTTTTGTAGCCCGTGATTCTAAGTCTGGAAAATCAGCTCCGGTTAACCAGATATTGCCGGAGACTGAGAAAGAAAAATTGCTCTGGGAAGAAGCAGATAAGAGGAATAAAATGAGGAAAAAGAAAAGAGCAGAACATAAAACAGATACAGAAAACCAGGACACAGACAGACTCAACGCCTTGTTAGCCGAAGGTCGAGTTTTCTGTGACATGCCAGCACTGGCAGACCGAGATAGCATTCTTATAAGGGATACTTGCCTCCAGAACTCCTTTATTTGCCAGCCACAGCAAAGGAACATCCATGGTCGGATCTTTGGAGGATTTTTGATGCGAAGAGCATTTGAAATTGCCTTCTCAACAACGTATGCATTTGCTGGTGTAGCACCACACTTTCTGGAAGTTGATCATGTTGATTTTGTTAGACCTGTCGATGTAGGAAATTTTCTCCGTTTGAAGTCTTGTGTTCTCTATACAGAACTTGAAAACCCAGATGAACCTCTGATAAACGTGGAAGTCGTTGCTCATGTTACACAGCCAGAGCTTAGGTCCAGTGAGGTATCAAACAAATTCTACTTCACGTTCTCTGTCCCTCCTGAAGCCATGAAAGATGGGATCCGGATTCGGAGCGTAGTTCCTGCTACTGAGGAGGAAGCACGGCGGGTGATTGAACGTATGGATGCTGAGAACTCCCAGTTTGCTGCCTTGTGA

Protein Analysis

514

Amino Acids

57.3

Weight (kDa)

7.66

Isoelectric Point (pI)

58.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010720)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 516, 1079
AccI GTMKAC 1 cut(s) 702
AccII CGCG 1 cut(s) 437
AccIII TCCGGA 1 cut(s) 1449
AciI CCGC 6 cut(s) 125, 145, 212, 243, 443, 1492
AclWI GGATC 7 cut(s) 181, 585, 786, 799, 1151, 1441, 1454
AcsI RAATTY 4 cut(s) 247, 759, 1273, 1400
AcuI CTGAAG 1 cut(s) 1449
AfaI GTAC 4 cut(s) 368, 416, 497, 533
AfiI CCNNNNNNNGG 2 cut(s) 548, 549
AgsI TTSAA 8 cut(s) 184, 610, 685, 715, 1178, 1288, 1316, 1502
AjnI CCWGG 4 cut(s) 227, 358, 542, 990
AluBI AGCT 3 cut(s) 766, 872, 1375
AluI AGCT 3 cut(s) 766, 872, 1375
Alw26I GTCTC 1 cut(s) 890
AlwI GGATC 7 cut(s) 181, 585, 786, 799, 1151, 1441, 1454
Aor13HI TCCGGA 1 cut(s) 1449
AoxI GGCC 2 cut(s) 356, 641
ApeKI GCWGC 3 cut(s) 310, 618, 1532
ApoI RAATTY 4 cut(s) 247, 759, 1273, 1400
AspLEI GCGC 3 cut(s) 439, 475, 728
AspS9I GGNCC 3 cut(s) 231, 483, 1380
AsuC2I CCSGG 1 cut(s) 272
AsuHPI GGTGA 6 cut(s) 31, 108, 126, 443, 667, 1507
AsuII TTCGAA 1 cut(s) 337
AvaII GGWCC 3 cut(s) 231, 483, 1380
BamHI GGATCC 2 cut(s) 791, 1446
BbvI GCAGC 3 cut(s) 322, 605, 1519
BccI CCATC 5 cut(s) 323, 623, 670, 811, 1436
BceAI ACGGC 1 cut(s) 1505
BcgI CGANNNNNNTGC 2 cut(s) 572, 606
BciT130I CCWGG 4 cut(s) 229, 360, 544, 992
BciVI GTATCC 1 cut(s) 1078
BclI TGATCA 1 cut(s) 1237
BcnI CCSGG 1 cut(s) 272
BcoDI GTCTC 1 cut(s) 890
BfoI RGCGCY 1 cut(s) 729
BfuI GTATCC 1 cut(s) 1078
BisI GCNGC 3 cut(s) 311, 619, 1533
BlsI GCNGC 3 cut(s) 312, 620, 1534
Bme1390I CCNGG 5 cut(s) 229, 272, 360, 544, 992
Bme18I GGWCC 3 cut(s) 231, 483, 1380
BmgT120I GGNCC 3 cut(s) 231, 483, 1380
BmiI GGNNCC 4 cut(s) 539, 598, 793, 1448
BmrFI CCNGG 5 cut(s) 229, 272, 360, 544, 992
BmrI ACTGGG 1 cut(s) 1519
BmsI GCATC 5 cut(s) 310, 434, 574, 1152, 1501
BmuI ACTGGG 1 cut(s) 1519
BpmI CTGGAG 1 cut(s) 1079
Bpu10I CCTNAGC 1 cut(s) 1376
Bpu14I TTCGAA 1 cut(s) 337
BpuEI CTTGAG 1 cut(s) 593
BpuMI CCSGG 1 cut(s) 272
Bsa29I ATCGAT 1 cut(s) 318
BsaJI CCNNGG 3 cut(s) 542, 753, 1135
BsaWI WCCGGW 2 cut(s) 874, 1449
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bsc4I CCNNNNNNNGG 2 cut(s) 548, 549
Bse1I ACTGG 5 cut(s) 486, 657, 1059, 1383, 1525
Bse3DI GCAATG 4 cut(s) 600, 613, 628, 813
BseAI TCCGGA 1 cut(s) 1449
BseBI CCWGG 4 cut(s) 229, 360, 544, 992
BseCI ATCGAT 1 cut(s) 318
BseDI CCNNGG 3 cut(s) 542, 753, 1135
BseGI GGATG 6 cut(s) 59, 106, 417, 749, 1131, 1516
BseLI CCNNNNNNNGG 2 cut(s) 548, 549
BseMI GCAATG 4 cut(s) 600, 613, 628, 813
BseMII CTCAG 6 cut(s) 25, 275, 512, 891, 1467, 1506
BseNI ACTGG 5 cut(s) 486, 657, 1059, 1383, 1525
BseRI GAGGAG 2 cut(s) 23, 1493
BseXI GCAGC 3 cut(s) 322, 605, 1519
Bsh1236I CGCG 1 cut(s) 437
BshFI GGCC 2 cut(s) 358, 643
BshVI ATCGAT 1 cut(s) 318
BsiSI CCGG 5 cut(s) 272, 470, 875, 893, 1450
BslFI GGGAC 2 cut(s) 434, 1406
BslI CCNNNNNNNGG 2 cut(s) 548, 549
BsmAI GTCTC 1 cut(s) 890
BsmFI GGGAC 2 cut(s) 434, 1406
BsmI GAATGC 2 cut(s) 605, 1071
BsnI GGCC 2 cut(s) 358, 643
Bsp119I TTCGAA 1 cut(s) 337
Bsp13I TCCGGA 1 cut(s) 1449
Bsp1407I TGTACA 2 cut(s) 366, 495
Bsp143I GATC 8 cut(s) 186, 345, 404, 577, 791, 1143, 1237, 1446
Bsp19I CCATGG 2 cut(s) 753, 1135
BspACI CCGC 6 cut(s) 125, 145, 212, 243, 443, 1492
BspANI GGCC 2 cut(s) 358, 643
BspCNI CTCAG 6 cut(s) 24, 274, 513, 892, 1468, 1507
BspDI ATCGAT 1 cut(s) 318
BspEI TCCGGA 1 cut(s) 1449
BspFNI CGCG 1 cut(s) 437
BspLI GGNNCC 4 cut(s) 539, 598, 793, 1448
BspPI GGATC 7 cut(s) 181, 585, 786, 799, 1151, 1441, 1454
BspQI GCTCTTC 2 cut(s) 334, 1162
BspT104I TTCGAA 1 cut(s) 337
BsrDI GCAATG 4 cut(s) 600, 613, 628, 813
BsrGI TGTACA 2 cut(s) 366, 495
BsrI ACTGG 5 cut(s) 486, 657, 1059, 1383, 1525
BssECI CCNNGG 3 cut(s) 542, 753, 1135
BssMI GATC 8 cut(s) 186, 345, 404, 577, 791, 1143, 1237, 1446
BssT1I CCWWGG 2 cut(s) 753, 1135
Bst2UI CCWGG 4 cut(s) 229, 360, 544, 992
Bst4CI ACNGT 3 cut(s) 286, 305, 371
Bst6I CTCTTC 3 cut(s) 41, 334, 1162
BstAUI TGTACA 2 cut(s) 366, 495
BstBI TTCGAA 1 cut(s) 337
BstC8I GCNNGC 3 cut(s) 325, 1050, 1115
BstDEI CTNAG 8 cut(s) 11, 261, 521, 855, 900, 1376, 1476, 1515
BstDSI CCRYGG 2 cut(s) 753, 1135
BstF5I GGATG 6 cut(s) 59, 106, 417, 749, 1131, 1516
BstFNI CGCG 1 cut(s) 437
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 3 cut(s) 439, 475, 728
BstKTI GATC 8 cut(s) 189, 348, 407, 580, 794, 1146, 1240, 1449
BstMAI GTCTC 1 cut(s) 890
BstMBI GATC 8 cut(s) 186, 345, 404, 577, 791, 1143, 1237, 1446
BstMWI GCNNNNNNNGC 3 cut(s) 824, 1019, 1214
BstNI CCWGG 4 cut(s) 229, 360, 544, 992
BstNSI RCATGY 1 cut(s) 1048
BstSCI CCNGG 5 cut(s) 227, 270, 358, 542, 990
BstUI CGCG 1 cut(s) 437
BstV1I GCAGC 3 cut(s) 322, 605, 1519
BstX2I RGATCY 5 cut(s) 186, 577, 791, 1143, 1446
BstYI RGATCY 5 cut(s) 186, 577, 791, 1143, 1446
Bsu15I ATCGAT 1 cut(s) 318
BsuI GTATCC 1 cut(s) 1078
BsuRI GGCC 2 cut(s) 358, 643
BsuTUI ATCGAT 1 cut(s) 318
BtgI CCRYGG 2 cut(s) 753, 1135
BtsCI GGATG 6 cut(s) 59, 106, 417, 749, 1131, 1516
BtsIMutI CAGTG 3 cut(s) 705, 1052, 1390
Cac8I GCNNGC 3 cut(s) 325, 1050, 1115
CfoI GCGC 3 cut(s) 439, 475, 728
Cfr13I GGNCC 3 cut(s) 231, 483, 1380
ClaI ATCGAT 1 cut(s) 318
CseI GACGC 2 cut(s) 431, 443
CsiI ACCWGGT 1 cut(s) 227
Csp6I GTAC 4 cut(s) 367, 415, 496, 532
CviAII CATG 6 cut(s) 754, 1045, 1136, 1241, 1358, 1435
CviQI GTAC 4 cut(s) 367, 415, 496, 532
DdeI CTNAG 8 cut(s) 11, 261, 521, 855, 900, 1376, 1476, 1515
DpnI GATC 8 cut(s) 188, 347, 406, 579, 793, 1145, 1239, 1448
DpnII GATC 8 cut(s) 186, 345, 404, 577, 791, 1143, 1237, 1446
Eam1104I CTCTTC 3 cut(s) 41, 334, 1162
EarI CTCTTC 3 cut(s) 41, 334, 1162
Eco130I CCWWGG 2 cut(s) 753, 1135
Eco147I AGGCCT 1 cut(s) 643
Eco47I GGWCC 3 cut(s) 231, 483, 1380
Eco57I CTGAAG 1 cut(s) 1449
EcoO109I RGGNCCY 1 cut(s) 231
EcoRII CCWGG 4 cut(s) 227, 358, 542, 990
EcoT14I CCWWGG 2 cut(s) 753, 1135
EcoT22I ATGCAT 1 cut(s) 1204
ErhI CCWWGG 2 cut(s) 753, 1135
FaeI CATG 6 cut(s) 757, 1048, 1139, 1244, 1361, 1438
FalI AAGNNNNNCTT 2 cut(s) 1072, 1104
FaqI GGGAC 2 cut(s) 434, 1406
FatI CATG 6 cut(s) 753, 1044, 1135, 1240, 1357, 1434
FauI CCCGC 4 cut(s) 132, 152, 219, 1485
FauNDI CATATG 1 cut(s) 734
FbaI TGATCA 1 cut(s) 1237
FblI GTMKAC 1 cut(s) 702
Fnu4HI GCNGC 3 cut(s) 311, 619, 1533
FokI GGATG 6 cut(s) 46, 93, 424, 736, 1118, 1523
Fsp4HI GCNGC 3 cut(s) 311, 619, 1533
GlaI GCGC 3 cut(s) 438, 474, 727
GluI GCNGC 3 cut(s) 311, 619, 1533
GsuI CTGGAG 1 cut(s) 1079
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 2 cut(s) 358, 643
HapII CCGG 5 cut(s) 272, 470, 875, 893, 1450
HgaI GACGC 2 cut(s) 431, 443
HhaI GCGC 3 cut(s) 439, 475, 728
Hin1II CATG 6 cut(s) 757, 1048, 1139, 1244, 1361, 1438
Hin6I GCGC 3 cut(s) 437, 473, 726
HinP1I GCGC 3 cut(s) 437, 473, 726
HincII GTYRAC 3 cut(s) 670, 703, 880
HindII GTYRAC 3 cut(s) 670, 703, 880
HinfI GANTC 8 cut(s) 131, 466, 478, 775, 809, 851, 1005, 1453
HpaI GTTAAC 1 cut(s) 880
HpaII CCGG 5 cut(s) 272, 470, 875, 893, 1450
HphI GGTGA 6 cut(s) 31, 108, 126, 443, 667, 1507
Hpy166II GTNNAC 3 cut(s) 670, 703, 880
Hpy188I TCNGA 8 cut(s) 14, 253, 483, 511, 808, 1143, 1335, 1458
Hpy188III TCNNGA 7 cut(s) 184, 581, 861, 1096, 1229, 1427, 1450
Hpy8I GTNNAC 3 cut(s) 670, 703, 880
HpyAV CCTTC 7 cut(s) 73, 120, 190, 244, 267, 1019, 1195
HpyCH4III ACNGT 3 cut(s) 286, 305, 371
HpyCH4IV ACGT 4 cut(s) 1196, 1341, 1412, 1504
HpyCH4V TGCA 5 cut(s) 323, 605, 621, 787, 1202
HpyF10VI GCNNNNNNNGC 3 cut(s) 824, 1019, 1214
HpyF3I CTNAG 8 cut(s) 11, 261, 521, 855, 900, 1376, 1476, 1515
HpySE526I ACGT 4 cut(s) 1196, 1341, 1412, 1504
Hsp92II CATG 6 cut(s) 757, 1048, 1139, 1244, 1361, 1438
HspAI GCGC 3 cut(s) 437, 473, 726
Kpn2I TCCGGA 1 cut(s) 1449
Ksp22I TGATCA 1 cut(s) 1237
KspAI GTTAAC 1 cut(s) 880
Kzo9I GATC 8 cut(s) 186, 345, 404, 577, 791, 1143, 1237, 1446
LguI GCTCTTC 2 cut(s) 334, 1162
LmnI GCTCC 2 cut(s) 877, 1458
Lsp1109I GCAGC 3 cut(s) 322, 605, 1519
LweI GCATC 5 cut(s) 310, 434, 574, 1152, 1501
MabI ACCWGGT 1 cut(s) 227
MaeII ACGT 4 cut(s) 1196, 1341, 1412, 1504
MaeIII GTNAC 7 cut(s) 286, 379, 431, 655, 772, 1040, 1360
MalI GATC 8 cut(s) 188, 347, 406, 579, 793, 1145, 1239, 1448
MboI GATC 8 cut(s) 186, 345, 404, 577, 791, 1143, 1237, 1446
MboII GAAGA 7 cut(s) 28, 48, 95, 321, 638, 935, 1179
MflI RGATCY 5 cut(s) 186, 577, 791, 1143, 1446
MluCI AATT 7 cut(s) 247, 452, 759, 911, 1179, 1273, 1400
MlyI GAGTC 5 cut(s) 460, 487, 769, 818, 999
MmeI TCCRAC 3 cut(s) 276, 461, 1121
Mph1103I ATGCAT 1 cut(s) 1204
MroI TCCGGA 1 cut(s) 1449
MseI TTAA 1 cut(s) 879
MspA1I CMGCKG 1 cut(s) 766
MspI CCGG 5 cut(s) 272, 470, 875, 893, 1450
MspR9I CCNGG 5 cut(s) 229, 272, 360, 544, 992
Mva1269I GAATGC 2 cut(s) 605, 1071
MvaI CCWGG 4 cut(s) 229, 360, 544, 992
MvnI CGCG 1 cut(s) 437
MwoI GCNNNNNNNGC 3 cut(s) 824, 1019, 1214
NciI CCSGG 1 cut(s) 272
NcoI CCATGG 2 cut(s) 753, 1135
NdeI CATATG 1 cut(s) 734
NdeII GATC 8 cut(s) 186, 345, 404, 577, 791, 1143, 1237, 1446
NlaIII CATG 6 cut(s) 757, 1048, 1139, 1244, 1361, 1438
NlaIV GGNNCC 4 cut(s) 539, 598, 793, 1448
NmuCI GTSAC 6 cut(s) 286, 379, 431, 655, 772, 1040
NsiI ATGCAT 1 cut(s) 1204
NspI RCATGY 1 cut(s) 1048
NspV TTCGAA 1 cut(s) 337
PceI AGGCCT 1 cut(s) 643
PciSI GCTCTTC 2 cut(s) 334, 1162
PcsI WCGNNNNNNNCGW 1 cut(s) 1347
PctI GAATGC 2 cut(s) 605, 1071
PfeI GAWTC 3 cut(s) 131, 851, 1453
PkrI GCNGC 3 cut(s) 312, 620, 1534
PleI GAGTC 5 cut(s) 460, 486, 769, 817, 999
PpsI GAGTC 5 cut(s) 460, 486, 769, 817, 999
PpuMI RGGWCCY 1 cut(s) 231
PsiI TTATAA 2 cut(s) 516, 1079
Psp5II RGGWCCY 1 cut(s) 231
Psp6I CCWGG 4 cut(s) 227, 358, 542, 990
PspGI CCWGG 4 cut(s) 227, 358, 542, 990
PspN4I GGNNCC 4 cut(s) 539, 598, 793, 1448
PspPI GGNCC 3 cut(s) 231, 483, 1380
PspPPI RGGWCCY 1 cut(s) 231
PsuI RGATCY 5 cut(s) 186, 577, 791, 1143, 1446
PvuII CAGCTG 1 cut(s) 766
RsaI GTAC 4 cut(s) 368, 416, 497, 533
RsaNI GTAC 4 cut(s) 367, 415, 496, 532
SalI GTCGAC 1 cut(s) 701
SapI GCTCTTC 2 cut(s) 334, 1162
SaqAI TTAA 1 cut(s) 879
SatI GCNGC 3 cut(s) 311, 619, 1533
Sau3AI GATC 8 cut(s) 186, 345, 404, 577, 791, 1143, 1237, 1446
Sau96I GGNCC 3 cut(s) 231, 483, 1380
SchI GAGTC 5 cut(s) 460, 487, 769, 818, 999
ScrFI CCNGG 5 cut(s) 229, 272, 360, 544, 992
SexAI ACCWGGT 1 cut(s) 227
SfaNI GCATC 5 cut(s) 310, 434, 574, 1152, 1501
SfuI TTCGAA 1 cut(s) 337
SinI GGWCC 3 cut(s) 231, 483, 1380
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
Sse9I AATT 7 cut(s) 247, 452, 759, 911, 1179, 1273, 1400
SseBI AGGCCT 1 cut(s) 643
SsiI CCGC 6 cut(s) 125, 145, 212, 243, 443, 1492
StuI AGGCCT 1 cut(s) 643
StyD4I CCNGG 5 cut(s) 227, 270, 358, 542, 990
StyI CCWWGG 2 cut(s) 753, 1135
TaaI ACNGT 3 cut(s) 286, 305, 371
TaiI ACGT 4 cut(s) 1199, 1344, 1415, 1507
TaqI TCGA 6 cut(s) 318, 337, 582, 702, 1030, 1263
TaqII GACCGA 1 cut(s) 1077
TasI AATT 7 cut(s) 247, 452, 759, 911, 1179, 1273, 1400
TatI WGTACW 3 cut(s) 366, 495, 531
TfiI GAWTC 3 cut(s) 131, 851, 1453
Tru1I TTAA 1 cut(s) 879
Tru9I TTAA 1 cut(s) 879
TscAI CASTG 3 cut(s) 712, 1059, 1390
TseFI GTSAC 6 cut(s) 286, 379, 431, 655, 772, 1040
TseI GCWGC 3 cut(s) 310, 618, 1532
Tsp45I GTSAC 6 cut(s) 286, 379, 431, 655, 772, 1040
TspDTI ATGAA 5 cut(s) 48, 95, 639, 1341, 1451
TspGWI ACGGA 1 cut(s) 1271
TspRI CASTG 3 cut(s) 712, 1059, 1390
VpaK11BI GGWCC 3 cut(s) 231, 483, 1380
XapI RAATTY 4 cut(s) 247, 759, 1273, 1400
XceI RCATGY 1 cut(s) 1048
XmiI GTMKAC 1 cut(s) 702
Zsp2I ATGCAT 1 cut(s) 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.