Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0015212

Physical Location & Seq

Genomic Coordinates Forward (+)

386537 .. 389232

Gene Structure 2696 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1005500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGATTAGCAGGAACATAAGCAGCTGCCGTGCGCCACAACTTGATCGGAACTTCTTCCTCGGACTCCTCAACAAGGCGACCTGTCTCTCTCACCTGACCCAGACCCACGCGCAGATCATCCTCAATGGCTACCAAAACGACCTCGCCACCGTCACCAAGCTCACCCACAAGTTCTCCGACCTCAAGGCCATGCGCCACGCACGTGACCTCTTCCTTTCCATCGCAAGACCCGACCTTTTCCTCTTCAACGTCGTCATCCGAGGCTTCGCCGCCAACGCCGCACCTTTCTCTGCGATTTCTCTCTACACCCATTTGCGGAAGAACACTAATCTTAAACCCGACAAGTTCACTTACGCTTTCGCCGTGTCGGCCGCTTCGGGTTTTAAGGACGAGAAATATGGGGTTTTGCTGCACGCGCACTCGATTGTTGATGGGTTAGGATTGAATTTGTATGTTGGGTCGATTGTTGTTGACTTTTACTTCAAGTTTTCCCGGGTTGAGTTAGCACAGAAGGTGTTTGATGGATTGCCCGAGAAGGACACGGTTTTGTGGAATACGATGATATCTGGGTTGGTGAGGAATTGTTATTACTCTGATTCGATGCGGGTTTTTGGAGATATGGTTGTGGGTGGGATGGGTTTTGATTCGACGACAGTGGCAACCGTGCTTCCTGCAGTGGCAGAGTTGCAGGAGTTGAAAGCAGGGATGGGAGTTCATTGTTTGGCTCTGAAGGCTGGATATCATTCAGATGTTCATGTGCTTACCGGCTTGGTTTCGTTGTATTCAAAATGTAAGGAGCTAGAGACGGCAAGGTTGTTATTTGGGCACATTAGTCGAACCGATTTGATATGTTATAATGCAATGATTGCCGGATACACTTGCAACAATGAAACTGAATCATCGGTTAGTCTTTTCAGGGATTTGCTTGCTTCTGGGGAGAAAGTCAATTCGAGTACAATTGTTGGGTTGATTCCTGTGTCTTCTCCTTTCGGTCATCTGCATCTCACTGGCTCTCTTCAAACTTTCTGTGTGAAATCTGGTATTGTTTCTCATCCTTCAGTTTCGACTGCATTTGTTACTGTTTACTGTAGACTGAATGAGATTGAATCGGCAAGACAGCTTTTTGATCAGTCTAAGGAGAAAACTTTGGCATCTTGGAATGCCATGATCTCGGGATATACCCAAAATGGGCTGACGGAGACTGCAATATCTCTTTTCCGTGAAATGATGTCTGAATTCAGTCCAAACCCTGTTACAGTTACAAGTATTCTTTCGGCATGTGCTCAGCTCGGAGCTATAAGTCTTGGGAAATGGGTCCATGGTTTGATTAAGAGCAAAAATCTTGAGTCTAACATCTATGTATTGACTTCTTTATTCGACTCGATGACAGAGAAAAATGTGGTCACTTGGAATGCCATGATATCTGCTTATGGCCTTCATGGTGATGGGCACGAAGCACTAAAACTCTTTACCGAGATGTTGCATTCTGGGATTTCCCCAAGCGCGGTTACTTTTCTATCCATCTTGTATGCTTGTAGCCATGCTGGCTTGGTGAGAGAAGGTGAAGAAATCTTCGATCATATGGTTCACAACCATGGCTTTGAGCCCTTGCCCGAGCATTATGCCTGCATGGTTGACATCCTTGGCAGAGCTGGAAAGTTAGAGAAGGCGTTGGAATTTATAAAGGAACTGCCAGGTGAGCCAGGTCCTCCCGTTTGGGGCGCATTGCTTGGTGCTTGCATGATTCACAAGAACACCGAACTGGCGTGTGTGGCTTCCGAAAGGCTATTTGAATTGGACCCAGATAATACAGGATATTATGTCTTGCTCTCCAATGTGTACTCAGCTGACAGGAACTTTCCGAAGGCTGCTTCAGTACGACAGGTAGTTAAGAATAGAAATTTGGCAAAGACTCCGGGATGCACTCTCGTTGAGATTGGTGAGACCCCACATGTTTTTATATGTGGTGATCAATCTCATCCTCAAGCAAAGGCAATCTATAGGATGCTGGATAAGTTAATGGGAAAAATGGCTGAGGCTGGATTTCAGACTGAAACTGTGACTGCTTTGCATGACGTTGAGGAGGAAGAGAAGGAGTTAATGATGAAGGTTCATAGTGAGAAGCTGGCCATTGCTTTTGCCCTGATTGAAACTGCACCAGGGACAGAAATTAGAATCTTTAAGAATCTCCGGGTTTGTTTGGATTGCCATAATGCAACTAAATTTATATCCAAGATCACAGAAAGAGTTATCGTAGTTAGGGATGCTAATAGATTCCATCATTTCAAAGACGGCGTTTGTTCTTGTGGAGACTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016553 GO:0016554 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

774

Amino Acids

85.29

Weight (kDa)

6.6

Isoelectric Point (pI)

34.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	384 - 428	7.9e-09	PPR repeat family
PPR	PF01535	385 - 411	6e-08	PPR repeat
PPR_2	PF13041	465 - 513	5.2e-13	PPR repeat family
PPR_3	PF13812	465 - 512	2.7e-07	Pentatricopeptide repeat domain
PPR	PF01535	468 - 498	5.7e-09	PPR repeat
E_motif	PF20431	583 - 645	3.3e-15	E motif
DYW_deaminase	PF14432	681 - 773	6.4e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Orthologous Genes (Group: OG0015212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30700
fragaria_vesca	FvH4_1g00680 FvH4_1g00680
malus_domestica	MD02G1005500.v1.1
prunus_persica	Prupe.7G265500_v2.0.a1
pyrus_communis	pycom02g00440 pycom15g13410
rosa_chinensis	RchiOBHm_Chr2g0085291
rosa_laevigata	RLG00000015675
rosa_multiflora	Rmu_sc0008510.1_g000011
rosa_roxburghii	Rroxscaffold_2G00155480
rosa_rugosa	Rorug01G0459300
rosa_samantha	Rh2BG008500 Rh2CG009200 Rh2DG009500
rosa_wichuraiana	Rw2G000730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	855, 1682
AccI	GTMKAC	1 cut(s)	1090
AccII	CGCG	3 cut(s)	110, 416, 1505
AciI	CCGC	6 cut(s)	270, 279, 316, 372, 604, 1505
AcoI	YGGCCR	2 cut(s)	369, 2127
AcsI	RAATTY	5 cut(s)	445, 1235, 1676, 1900, 2222
AcuI	CTGAAG	3 cut(s)	749, 1041, 1857
AcvI	CACGTG	1 cut(s)	203
AfaI	GTAC	3 cut(s)	955, 1841, 1878
AfiI	CCNNNNNNNGG	5 cut(s)	73, 315, 1188, 1504, 1718
AflIII	ACRYGT	1 cut(s)	1951
AjnI	CCWGG	3 cut(s)	1693, 1702, 2158
AjuI	GAANNNNNNNTTGG	2 cut(s)	1886, 1918
AleI	CACNNNNGTG	1 cut(s)	201
AluBI	AGCT	9 cut(s)	24, 160, 799, 1120, 1288, 1295, 1652, 1847, 2125
AluI	AGCT	9 cut(s)	24, 160, 799, 1120, 1288, 1295, 1652, 1847, 2125
Alw21I	GWGCWC	1 cut(s)	1285
Alw26I	GTCTC	5 cut(s)	89, 797, 1193, 1937, 2304
Ama87I	CYCGRG	4 cut(s)	492, 530, 1171, 1613
AoxI	GGCC	4 cut(s)	186, 369, 1432, 2127
ApeKI	GCWGC	4 cut(s)	21, 24, 409, 1868
ApoI	RAATTY	5 cut(s)	445, 1235, 1676, 1900, 2222
Asp700I	GAANNNNTTC	1 cut(s)	53
AspLEI	GCGC	6 cut(s)	34, 112, 195, 418, 1505, 1724
AspS9I	GGNCC	3 cut(s)	1315, 1706, 1798
AsuC2I	CCSGG	4 cut(s)	493, 494, 1917, 2192
AvaI	CYCGRG	4 cut(s)	492, 530, 1171, 1613
AvaII	GGWCC	3 cut(s)	1315, 1706, 1798
BaeGI	GKGCMC	2 cut(s)	828, 1452
BalI	TGGCCA	1 cut(s)	2129
BanII	GRGCYC	1 cut(s)	1608
BbrPI	CACGTG	1 cut(s)	203
BbsI	GAAGAC	1 cut(s)	972
Bbv12I	GWGCWC	1 cut(s)	1285
BbvCI	CCTCAGC	1 cut(s)	2034
BbvI	GCAGC	4 cut(s)	11, 33, 396, 1855
BccI	CCATC	8 cut(s)	227, 425, 515, 628, 700, 1439, 1529, 2286
BceAI	ACGGC	4 cut(s)	12, 347, 822, 2308
BcgI	CGANNNNNNTGC	4 cut(s)	815, 849, 1604, 1638
BciT130I	CCWGG	3 cut(s)	1695, 1704, 2160
BciVI	GTATCC	1 cut(s)	866
BclI	TGATCA	2 cut(s)	1126, 1969
BcnI	CCSGG	4 cut(s)	493, 494, 1917, 2192
BcoDI	GTCTC	5 cut(s)	89, 797, 1193, 1937, 2304
BfaI	CTAG	1 cut(s)	800
BfmI	CTRYAG	3 cut(s)	672, 1087, 1999
BfuI	GTATCC	1 cut(s)	866
BglI	GCCNNNNNGGC	2 cut(s)	368, 1545
BisI	GCNGC	7 cut(s)	22, 25, 270, 279, 372, 410, 1869
BlpI	GCTNAGC	1 cut(s)	1284
BlsI	GCNGC	7 cut(s)	23, 26, 271, 280, 373, 411, 1870
Bme1390I	CCNGG	7 cut(s)	493, 494, 1695, 1704, 1917, 2160, 2192
Bme18I	GGWCC	3 cut(s)	1315, 1706, 1798
BmeT110I	CYCGRG	4 cut(s)	492, 530, 1171, 1613
BmgT120I	GGNCC	3 cut(s)	1315, 1706, 1798
BmiI	GGNNCC	2 cut(s)	1316, 1800
BmrFI	CCNGG	7 cut(s)	493, 494, 1695, 1704, 1917, 2160, 2192
BmsI	GCATC	6 cut(s)	591, 1009, 1160, 1910, 1995, 2254
BpiI	GAAGAC	1 cut(s)	972
Bpu10I	CCTNAGC	1 cut(s)	2034
Bpu1102I	GCTNAGC	1 cut(s)	1284
BpuEI	CTTGAG	3 cut(s)	167, 1364, 1968
BpuMI	CCSGG	4 cut(s)	493, 494, 1917, 2192
BsaAI	YACGTR	1 cut(s)	203
BsaI	GGTCTC	1 cut(s)	1937
BsaJI	CCNNGG	7 cut(s)	58, 259, 492, 1318, 1594, 1642, 2159
BsaXI	ACNNNNNCTCC	4 cut(s)	158, 188, 606, 636
Bsc4I	CCNNNNNNNGG	5 cut(s)	73, 315, 1188, 1504, 1718
Bse118I	RCCGGY	1 cut(s)	764
Bse1I	ACTGG	2 cut(s)	1012, 1767
Bse3DI	GCAATG	3 cut(s)	867, 1724, 2130
BseBI	CCWGG	3 cut(s)	1695, 1704, 2160
BseDI	CCNNGG	7 cut(s)	58, 259, 492, 1318, 1594, 1642, 2159
BseLI	CCNNNNNNNGG	5 cut(s)	73, 315, 1188, 1504, 1718
BseMI	GCAATG	3 cut(s)	867, 1724, 2130
BseMII	CTCAG	3 cut(s)	1298, 1857, 2025
BseNI	ACTGG	2 cut(s)	1012, 1767
BseRI	GAGGAG	2 cut(s)	56, 2096
BseSI	GKGCMC	2 cut(s)	828, 1452
BseX3I	CGGCCG	1 cut(s)	369
BseXI	GCAGC	4 cut(s)	11, 33, 396, 1855
BsgI	GTGCAG	2 cut(s)	395, 2139
Bsh1236I	CGCG	3 cut(s)	110, 416, 1505
Bsh1285I	CGRYCG	1 cut(s)	372
BshFI	GGCC	4 cut(s)	188, 371, 1434, 2129
BsiEI	CGRYCG	1 cut(s)	372
BsiHKAI	GWGCWC	1 cut(s)	1285
BsiHKCI	CYCGRG	4 cut(s)	492, 530, 1171, 1613
BsiSI	CCGG	5 cut(s)	493, 765, 870, 1916, 2191
BslFI	GGGAC	1 cut(s)	2176
BslI	CCNNNNNNNGG	5 cut(s)	73, 315, 1188, 1504, 1718
BsmAI	GTCTC	5 cut(s)	89, 797, 1193, 1937, 2304
BsmBI	CGTCTC	1 cut(s)	797
BsmFI	GGGAC	1 cut(s)	2176
BsmI	GAATGC	3 cut(s)	1165, 1417, 1483
BsnI	GGCC	4 cut(s)	188, 371, 1434, 2129
Bso31I	GGTCTC	1 cut(s)	1937
BsoBI	CYCGRG	4 cut(s)	492, 530, 1171, 1613
Bsp1286I	GDGCHC	4 cut(s)	828, 1285, 1452, 1608
Bsp143I	GATC	7 cut(s)	43, 114, 1126, 1167, 1576, 1969, 2235
Bsp1720I	GCTNAGC	1 cut(s)	1284
Bsp19I	CCATGG	2 cut(s)	1318, 1594
BspACI	CCGC	6 cut(s)	270, 279, 316, 372, 604, 1505
BspANI	GGCC	4 cut(s)	188, 371, 1434, 2129
BspCNI	CTCAG	3 cut(s)	1297, 1856, 2026
BspFNI	CGCG	3 cut(s)	110, 416, 1505
BspLI	GGNNCC	2 cut(s)	1316, 1800
BspMAI	CTGCAG	1 cut(s)	676
BspTNI	GGTCTC	1 cut(s)	1937
BsrDI	GCAATG	3 cut(s)	867, 1724, 2130
BsrFI	RCCGGY	1 cut(s)	764
BsrI	ACTGG	2 cut(s)	1012, 1767
BssAI	RCCGGY	1 cut(s)	764
BssECI	CCNNGG	7 cut(s)	58, 259, 492, 1318, 1594, 1642, 2159
BssMI	GATC	7 cut(s)	43, 114, 1126, 1167, 1576, 1969, 2235
BssT1I	CCWWGG	3 cut(s)	1318, 1594, 1642
Bst2UI	CCWGG	3 cut(s)	1695, 1704, 2160
Bst4CI	ACNGT	8 cut(s)	151, 544, 655, 664, 1081, 1088, 1258, 2059
Bst6I	CTCTTC	4 cut(s)	215, 248, 1020, 2082
BstAPI	GCANNNNNTGC	1 cut(s)	866
BstBAI	YACGTR	1 cut(s)	203
BstC8I	GCNNGC	6 cut(s)	414, 927, 1546, 1627, 1738, 2127
BstDEI	CTNAG	4 cut(s)	1134, 1284, 1843, 2034
BstDSI	CCRYGG	2 cut(s)	1318, 1594
BstENI	CCTNNNNNAGG	1 cut(s)	71
BstFNI	CGCG	3 cut(s)	110, 416, 1505
BstHHI	GCGC	6 cut(s)	34, 112, 195, 418, 1505, 1724
BstKTI	GATC	7 cut(s)	46, 117, 1129, 1170, 1579, 1972, 2238
BstMAI	GTCTC	5 cut(s)	89, 797, 1193, 1937, 2304
BstMBI	GATC	7 cut(s)	43, 114, 1126, 1167, 1576, 1969, 2235
BstMCI	CGRYCG	1 cut(s)	372
BstMWI	GCNNNNNNNGC	9 cut(s)	275, 278, 368, 415, 731, 866, 1545, 1699, 1772
BstNI	CCWGG	3 cut(s)	1695, 1704, 2160
BstNSI	RCATGY	2 cut(s)	1281, 1955
BstSCI	CCNGG	7 cut(s)	491, 492, 1693, 1702, 1915, 2158, 2190
BstSFI	CTRYAG	3 cut(s)	672, 1087, 1999
BstSLI	GKGCMC	2 cut(s)	828, 1452
BstUI	CGCG	3 cut(s)	110, 416, 1505
BstV1I	GCAGC	4 cut(s)	11, 33, 396, 1855
BstV2I	GAAGAC	1 cut(s)	972
BstZI	CGGCCG	1 cut(s)	369
BsuI	GTATCC	1 cut(s)	866
BsuRI	GGCC	4 cut(s)	188, 371, 1434, 2129
BtgI	CCRYGG	2 cut(s)	1318, 1594
BtgZI	GCGATG	1 cut(s)	205
BtsI	GCAGTG	1 cut(s)	681
BtsIMutI	CAGTG	3 cut(s)	660, 681, 1005
Cac8I	GCNNGC	6 cut(s)	414, 927, 1546, 1627, 1738, 2127
CfoI	GCGC	6 cut(s)	34, 112, 195, 418, 1505, 1724
Cfr10I	RCCGGY	1 cut(s)	764
Cfr13I	GGNCC	3 cut(s)	1315, 1706, 1798
Cfr9I	CCCGGG	1 cut(s)	492
Csp6I	GTAC	3 cut(s)	954, 1840, 1877
CviQI	GTAC	3 cut(s)	954, 1840, 1877
DdeI	CTNAG	4 cut(s)	1134, 1284, 1843, 2034
DpnI	GATC	7 cut(s)	45, 116, 1128, 1169, 1578, 1971, 2237
DpnII	GATC	7 cut(s)	43, 114, 1126, 1167, 1576, 1969, 2235
EaeI	YGGCCR	2 cut(s)	369, 2127
EagI	CGGCCG	1 cut(s)	369
Eam1104I	CTCTTC	4 cut(s)	215, 248, 1020, 2082
EarI	CTCTTC	4 cut(s)	215, 248, 1020, 2082
EclXI	CGGCCG	1 cut(s)	369
Eco130I	CCWWGG	3 cut(s)	1318, 1594, 1642
Eco24I	GRGCYC	1 cut(s)	1608
Eco31I	GGTCTC	1 cut(s)	1937
Eco32I	GATATC	3 cut(s)	564, 740, 1422
Eco47I	GGWCC	3 cut(s)	1315, 1706, 1798
Eco52I	CGGCCG	1 cut(s)	369
Eco57I	CTGAAG	3 cut(s)	749, 1041, 1857
Eco72I	CACGTG	1 cut(s)	203
Eco88I	CYCGRG	4 cut(s)	492, 530, 1171, 1613
EcoNI	CCTNNNNNAGG	1 cut(s)	71
EcoO109I	RGGNCCY	1 cut(s)	1706
EcoRI	GAATTC	1 cut(s)	1235
EcoRII	CCWGG	3 cut(s)	1693, 1702, 2158
EcoRV	GATATC	3 cut(s)	564, 740, 1422
EcoT14I	CCWWGG	3 cut(s)	1318, 1594, 1642
EcoT38I	GRGCYC	1 cut(s)	1608
ErhI	CCWWGG	3 cut(s)	1318, 1594, 1642
Esp3I	CGTCTC	1 cut(s)	797
FaqI	GGGAC	1 cut(s)	2176
FauI	CCCGC	1 cut(s)	597
FauNDI	CATATG	1 cut(s)	1581
FbaI	TGATCA	2 cut(s)	1126, 1969
FblI	GTMKAC	1 cut(s)	1090
Fnu4HI	GCNGC	7 cut(s)	22, 25, 270, 279, 372, 410, 1869
FriOI	GRGCYC	1 cut(s)	1608
Fsp4HI	GCNGC	7 cut(s)	22, 25, 270, 279, 372, 410, 1869
FspBI	CTAG	1 cut(s)	800
GlaI	GCGC	6 cut(s)	33, 111, 194, 417, 1504, 1723
GluI	GCNGC	7 cut(s)	22, 25, 270, 279, 372, 410, 1869
HaeIII	GGCC	4 cut(s)	188, 371, 1434, 2129
HapII	CCGG	5 cut(s)	493, 765, 870, 1916, 2191
HhaI	GCGC	6 cut(s)	34, 112, 195, 418, 1505, 1724
Hin6I	GCGC	6 cut(s)	32, 110, 193, 416, 1503, 1722
HinP1I	GCGC	6 cut(s)	32, 110, 193, 416, 1503, 1722
HincII	GTYRAC	2 cut(s)	472, 1636
HindII	GTYRAC	2 cut(s)	472, 1636
HpaII	CCGG	5 cut(s)	493, 765, 870, 1916, 2191
Hpy166II	GTNNAC	7 cut(s)	348, 472, 1084, 1091, 1588, 1636, 1840
Hpy188III	TCNNGA	2 cut(s)	1173, 1343
Hpy8I	GTNNAC	7 cut(s)	348, 472, 1084, 1091, 1588, 1636, 1840
Hpy99I	CGWCG	2 cut(s)	254, 652
HpyCH4III	ACNGT	8 cut(s)	151, 544, 655, 664, 1081, 1088, 1258, 2059
HpyCH4IV	ACGT	3 cut(s)	202, 249, 2076
HpyF10VI	GCNNNNNNNGC	9 cut(s)	275, 278, 368, 415, 731, 866, 1545, 1699, 1772
HpyF3I	CTNAG	4 cut(s)	1134, 1284, 1843, 2034
HpySE526I	ACGT	3 cut(s)	202, 249, 2076
HspAI	GCGC	6 cut(s)	32, 110, 193, 416, 1503, 1722
Ksp22I	TGATCA	2 cut(s)	1126, 1969
Kzo9I	GATC	7 cut(s)	43, 114, 1126, 1167, 1576, 1969, 2235
LmnI	GCTCC	2 cut(s)	796, 1292
Lsp1109I	GCAGC	4 cut(s)	11, 33, 396, 1855
LweI	GCATC	6 cut(s)	591, 1009, 1160, 1910, 1995, 2254
MaeI	CTAG	1 cut(s)	800
MaeII	ACGT	3 cut(s)	202, 249, 2076
MaeIII	GTNAC	8 cut(s)	151, 203, 1075, 1252, 1258, 1402, 1507, 2059
MalI	GATC	7 cut(s)	45, 116, 1128, 1169, 1578, 1971, 2237
MboI	GATC	7 cut(s)	43, 114, 1126, 1167, 1576, 1969, 2235
MboII	GAAGA	9 cut(s)	46, 202, 235, 331, 972, 1007, 1564, 1577, 2099
MfeI	CAATTG	1 cut(s)	957
MhlI	GDGCHC	4 cut(s)	828, 1285, 1452, 1608
MlsI	TGGCCA	1 cut(s)	2129
MluNI	TGGCCA	1 cut(s)	2129
MlyI	GAGTC	4 cut(s)	57, 1355, 1373, 1906
MmeI	TCCRAC	2 cut(s)	201, 1653
Mox20I	TGGCCA	1 cut(s)	2129
MroXI	GAANNNNTTC	1 cut(s)	53
MscI	TGGCCA	1 cut(s)	2129
MseI	TTAA	7 cut(s)	333, 384, 1329, 1890, 2018, 2099, 2181
MslI	CAYNNNNRTG	4 cut(s)	201, 747, 1443, 1593
Msp20I	TGGCCA	1 cut(s)	2129
MspA1I	CMGCKG	2 cut(s)	24, 1847
MspI	CCGG	5 cut(s)	493, 765, 870, 1916, 2191
MspR9I	CCNGG	7 cut(s)	493, 494, 1695, 1704, 1917, 2160, 2192
MunI	CAATTG	1 cut(s)	957
Mva1269I	GAATGC	3 cut(s)	1165, 1417, 1483
MvaI	CCWGG	3 cut(s)	1695, 1704, 2160
MvnI	CGCG	3 cut(s)	110, 416, 1505
MwoI	GCNNNNNNNGC	9 cut(s)	275, 278, 368, 415, 731, 866, 1545, 1699, 1772
NciI	CCSGG	4 cut(s)	493, 494, 1917, 2192
NcoI	CCATGG	2 cut(s)	1318, 1594
NdeI	CATATG	1 cut(s)	1581
NdeII	GATC	7 cut(s)	43, 114, 1126, 1167, 1576, 1969, 2235
NlaIV	GGNNCC	2 cut(s)	1316, 1800
NmuCI	GTSAC	4 cut(s)	151, 203, 1402, 2059
NspI	RCATGY	2 cut(s)	1281, 1955
OliI	CACNNNNGTG	1 cut(s)	201
PciI	ACATGT	1 cut(s)	1951
PcsI	WCGNNNNNNNCGW	2 cut(s)	228, 360
PctI	GAATGC	3 cut(s)	1165, 1417, 1483
PdmI	GAANNNNTTC	1 cut(s)	53
PfeI	GAWTC	9 cut(s)	596, 644, 896, 970, 1106, 1744, 2175, 2185, 2274
PfoI	TCCNGGA	1 cut(s)	1915
PkrI	GCNGC	7 cut(s)	23, 26, 271, 280, 373, 411, 1870
PleI	GAGTC	4 cut(s)	57, 1354, 1373, 1906
PmaCI	CACGTG	1 cut(s)	203
PmlI	CACGTG	1 cut(s)	203
PpsI	GAGTC	4 cut(s)	57, 1354, 1373, 1906
Ppu21I	YACGTR	1 cut(s)	203
PpuMI	RGGWCCY	1 cut(s)	1706
PscI	ACATGT	1 cut(s)	1951
PsiI	TTATAA	2 cut(s)	855, 1682
Psp5II	RGGWCCY	1 cut(s)	1706
Psp6I	CCWGG	3 cut(s)	1693, 1702, 2158
PspCI	CACGTG	1 cut(s)	203
PspGI	CCWGG	3 cut(s)	1693, 1702, 2158
PspN4I	GGNNCC	2 cut(s)	1316, 1800
PspPI	GGNCC	3 cut(s)	1315, 1706, 1798
PspPPI	RGGWCCY	1 cut(s)	1706
PstI	CTGCAG	1 cut(s)	676
PvuII	CAGCTG	2 cut(s)	24, 1847
RsaI	GTAC	3 cut(s)	955, 1841, 1878
RsaNI	GTAC	3 cut(s)	954, 1840, 1877
RseI	CAYNNNNRTG	4 cut(s)	201, 747, 1443, 1593
SaqAI	TTAA	7 cut(s)	333, 384, 1329, 1890, 2018, 2099, 2181
SatI	GCNGC	7 cut(s)	22, 25, 270, 279, 372, 410, 1869
Sau3AI	GATC	7 cut(s)	43, 114, 1126, 1167, 1576, 1969, 2235
Sau96I	GGNCC	3 cut(s)	1315, 1706, 1798
SchI	GAGTC	4 cut(s)	57, 1355, 1373, 1906
ScrFI	CCNGG	7 cut(s)	493, 494, 1695, 1704, 1917, 2160, 2192
SduI	GDGCHC	4 cut(s)	828, 1285, 1452, 1608
SfaNI	GCATC	6 cut(s)	591, 1009, 1160, 1910, 1995, 2254
SfcI	CTRYAG	3 cut(s)	672, 1087, 1999
SinI	GGWCC	3 cut(s)	1315, 1706, 1798
SmaI	CCCGGG	1 cut(s)	494
SmiMI	CAYNNNNRTG	4 cut(s)	201, 747, 1443, 1593
SmlI	CTYRAG	3 cut(s)	182, 1343, 1983
SmoI	CTYRAG	3 cut(s)	182, 1343, 1983
SsiI	CCGC	6 cut(s)	270, 279, 316, 372, 604, 1505
SspMI	CTAG	1 cut(s)	800
StyD4I	CCNGG	7 cut(s)	491, 492, 1693, 1702, 1915, 2158, 2190
StyI	CCWWGG	3 cut(s)	1318, 1594, 1642
TaaI	ACNGT	8 cut(s)	151, 544, 655, 664, 1081, 1088, 1258, 2059
TaiI	ACGT	3 cut(s)	205, 252, 2079
TaqII	GACCGA	1 cut(s)	980
TatI	WGTACW	2 cut(s)	953, 1839
TauI	GCSGC	3 cut(s)	272, 281, 374
TfiI	GAWTC	9 cut(s)	596, 644, 896, 970, 1106, 1744, 2175, 2185, 2274
Tru1I	TTAA	7 cut(s)	333, 384, 1329, 1890, 2018, 2099, 2181
Tru9I	TTAA	7 cut(s)	333, 384, 1329, 1890, 2018, 2099, 2181
TscAI	CASTG	3 cut(s)	660, 681, 1012
TseFI	GTSAC	4 cut(s)	151, 203, 1402, 2059
TseI	GCWGC	4 cut(s)	21, 24, 409, 1868
Tsp45I	GTSAC	4 cut(s)	151, 203, 1402, 2059
TspDTI	ATGAA	6 cut(s)	704, 743, 903, 1427, 2102, 2120
TspGWI	ACGGA	2 cut(s)	1208, 1211
TspMI	CCCGGG	1 cut(s)	492
TspRI	CASTG	3 cut(s)	660, 681, 1012
VpaK11BI	GGWCC	3 cut(s)	1315, 1706, 1798
XagI	CCTNNNNNAGG	1 cut(s)	71
XapI	RAATTY	5 cut(s)	445, 1235, 1676, 1900, 2222
XceI	RCATGY	2 cut(s)	1281, 1955
XmaI	CCCGGG	1 cut(s)	492
XmiI	GTMKAC	1 cut(s)	1090
XmnI	GAANNNNTTC	1 cut(s)	53
XspI	CTAG	1 cut(s)	800

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.