MD02G1040000.v1.1
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0014173
Physical Location & Seq
Reverse (-)
3249315 .. 3252911
3597 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1040000.v1.1.491

Sequence Viewer

Length: 1971 bp
ATGATGGCAGTGAGTTTTAGTGCTGCTACTGTGGTGGGTTTTGTTCTGATTACGCTTCTGTCACTGAGTGGCGAGCGAGTCAACTCGGAGCCGATTCAGGACAAGCAAGCCCTCCTTGCGTTTCTGTCCCAGACTCCACATGCGAACCGGGTCCAATGGAACGCGTCGGTTTCGGCCTGCACCTGGGTCGGAATCAAATGCGACGACAACCAGTCCTACGTCTACTCCCTCCGCCTCCCGGGTGTCGGCCTCGTCGGGCCCGTCCCGCCCAACACGCTCGGCCGGCTGACTCAGCTTCGGGTTCTCAGTCTCCGTTCTAACCGACTCTCCGGTCCCATCCCTGCCGATTTCTCCAACCTAACTCTGCTCCGCAGTCTCTACCTCCAGGGGAATCAATTATCGGGTGAGTTTCCGACCGGGCTGACCCAGTTGGAGCGGTTGAACAGGCTCGTTCTCAGCTCCAACAACTTCACCGGTCCGATTCCATTTGCCGTCAGCAACCTGACCCACTTGACGGTACTCTTTGTTGAAAACAATGGTTTCTCAGGCAAGCTGCCGAACATCCAGGCTCCCAATCTAACCAACTTCAACGTTTCAAACAACAAACTCAACGGCTCGATCCCGCAATCGCTATCAAACTTCCCCGCCTCTGCATTCTCTGGAAACTTAGATCTTTGCGGTGGCCCGCTTAAGGCGTGCAACCCGTTTTTCCCTGCTCCCGCTCCGTCGCCCGAGTCCCCGCCCATAATCCCAGCCCACAAAAAGTCCAAGAAGCTCTCTACCGCCGCCATTGTCGCCATCGCCGTGGGGTCCGCTCTAGCCCTGTTCCTACTCCTCCTCGTACTCTTCCTCTGCCTCCGGAAACGGCGCCGACAGCAGCCGGCGAAGGCGCCAAAGCCACCTGTGGCCACACGGTCGGTAGAGACGGAGGCTGGAACATCATCCTCGAAAGACGACATCACGGGCGGGTCCACCGAGGCGGAGAGAAACAAACTTGTGTTCTTCAACGGCGGAGTTTACAGCTTCGATTTGGAGGACTTGTTGAGAGCGTCGGCTGAGGTTTTGGGGAAGGGAAGCGTGGGGACGTCGTACAAGGCGGTGCTGGAGGAAGGGACGACGGTGGTGGTGAAGCGGCTGAAGGACGTCGTGGTTACGAAGAGAGAGTTCGAGATGACAATGGAGGTTCTGGGGAAGATTAAGCACGACAATGTGGTGCCGCTGCGCGCGTTTTACTTCTCGAAGGACGAGAAATTGCTCGTCTCCGATTACATGTCCGCCGGCAGCTTGTCTGCCCTTCTCCACGGGAGTAGAGGCTCGGGCCGGACGCCACTAGACTGGGACAACCGTATGAAAATAGCGCTGAGCGCGGCAAGAGGAATAGCGCACCTCCACGTGTCAGGCAAGGTGGTCCACGGCAACATTAAATCCTCCAACATCCTCCTCCGGCCGGACAACGACGCTTCCGTTTCCGACTTCGGGCTCAACCCGCTCTTCGGGACTTCCACGCCGCCGAACCGGGTGGCGGGATACCGCGCGCCGGAGGTGGTGGAGACCCGGAAGGTCACGTTCAAATCCGACGTGTACAGTTTTGGCGTGTTGCTGCTGGAGCTGTTAACCGGGAAAGCGCCCAATCAGGCGTCGCTGGGTGAGGAGGGGATCGATTTGCCACGGTGGGTGCAGTCGGTGGTAAGGGAGGAGTGGACGGCGGAGGTCTTCGACGTGGAGCTGATGAGGTACCACAACATTGAGGAGGAGATGGTGCAGCTTTTACAGATCGCCATGGCGTGCGTGTCCACGGTACCCGATCAAAGACCCGCAATGCAGGAGGTGGTCCGGATGATCGAAGATATGAACCGGGCCGAGACCGATGACGGGTTACGACAGTCGTCCGATGATCCTTCGAAAGGATCGGACGGTCATACTCCTCCCGGTGGGTCGAGGACCCCACCCAGCGTCACACCCACGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

657

Amino Acids

70.92

Weight (kDa)

8.71

Isoelectric Point (pI)

44.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 68 3.7e-06 Leucine rich repeat N-terminal domain
LRR_8 PF13855 88 - 133 5.3e-08 Leucine rich repeat
LRR_14 PF23598 91 - 175 8.2e-08 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 353 - 613 3.2e-36 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 353 - 612 1.2e-35 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26730
fragaria_vesca FvH4_1g04150
malus_domestica MD02G1040000.v1.1 MD15G1144900.v1.1
prunus_persica Prupe.7G235700_v2.0.a1
pyrus_communis pycom02g03330 pycom15g16220
rosa_chinensis RchiOBHm_Chr2g0089641
rosa_laevigata RLG00000016046
rosa_multiflora Rmu_sc0000665.1_g000027
rosa_roxburghii Rroxscaffold_2G00151700
rosa_rugosa Rorug02G0002200
rosa_samantha Rh2AG047500 Rh2BG046200 Rh2CG048100 Rh2DG047600
rosa_wichuraiana Rw2G004290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 330
AatII GACGTC 2 cut(s) 1088, 1146
Acc65I GGTACC 2 cut(s) 1734, 1798
AccB1I GGYRCC 5 cut(s) 867, 889, 1213, 1734, 1798
AccBSI CCGCTC 4 cut(s) 436, 722, 815, 1489
AccI GTMKAC 1 cut(s) 222
AccII CGCG 6 cut(s) 164, 1224, 1226, 1367, 1533, 1535
AccIII TCCGGA 2 cut(s) 858, 1833
AclI AACGTT 1 cut(s) 591
AclWI GGATC 4 cut(s) 613, 1664, 1889, 1915
AcoI YGGCCR 3 cut(s) 280, 906, 1445
AcuI CTGAAG 1 cut(s) 1157
AcvI CACGTG 1 cut(s) 1393
AcyI GRCGYC 6 cut(s) 868, 890, 1085, 1143, 1325, 1637
AdeI CACNNNGTG 1 cut(s) 68
AfaI GTAC 6 cut(s) 519, 843, 1091, 1583, 1736, 1800
AfeI AGCGCT 1 cut(s) 1359
AflII CTTAAG 1 cut(s) 689
AflIII ACRYGT 4 cut(s) 162, 1269, 1392, 1578
AgeI ACCGGT 1 cut(s) 473
AgsI TTSAA 6 cut(s) 442, 530, 589, 597, 1006, 1570
AhdI GACNNNNNGTC 1 cut(s) 211
AjiI CACGTC 2 cut(s) 1579, 1720
AjnI CCWGG 3 cut(s) 182, 384, 564
AluBI AGCT 9 cut(s) 295, 459, 553, 775, 1023, 1284, 1609, 1726, 1765
AluI AGCT 9 cut(s) 295, 459, 553, 775, 1023, 1284, 1609, 1726, 1765
Alw26I GTCTC 6 cut(s) 314, 380, 917, 1264, 1544, 1856
AlwI GGATC 4 cut(s) 613, 1664, 1889, 1915
Ama87I CYCGRG 3 cut(s) 238, 731, 1315
Aor13HI TCCGGA 2 cut(s) 858, 1833
Aor51HI AGCGCT 1 cut(s) 1359
AoxI GGCC 9 cut(s) 174, 247, 257, 280, 682, 906, 1318, 1445, 1857
ApaI GGGCCC 1 cut(s) 261
ApeKI GCWGC 7 cut(s) 23, 553, 877, 1219, 1281, 1600, 1762
AsiGI ACCGGT 1 cut(s) 473
Asp718I GGTACC 2 cut(s) 1734, 1798
AsuC2I CCSGG 9 cut(s) 149, 239, 240, 418, 1517, 1555, 1618, 1856, 1929
AsuHPI GGTGA 4 cut(s) 416, 463, 1138, 1658
AsuII TTCGAA 1 cut(s) 1901
AvaI CYCGRG 3 cut(s) 238, 731, 1315
AvaII GGWCC 8 cut(s) 151, 332, 476, 810, 969, 1408, 1831, 1941
BaeGI GKGCMC 1 cut(s) 261
BalI TGGCCA 1 cut(s) 908
BanI GGYRCC 5 cut(s) 867, 889, 1213, 1734, 1798
BanII GRGCYC 2 cut(s) 261, 1482
BbrPI CACGTG 1 cut(s) 1393
BbsI GAAGAC 1 cut(s) 1705
BbvCI CCTCAGC 1 cut(s) 1056
BbvI GCAGC 7 cut(s) 10, 540, 889, 1206, 1293, 1587, 1774
BccI CCATC 3 cut(s) 344, 806, 1750
BceAI ACGGC 7 cut(s) 476, 628, 788, 881, 1024, 1429, 1719
BcgI CGANNNNNNTGC 2 cut(s) 169, 203
BciT130I CCWGG 3 cut(s) 184, 386, 566
BciVI GTATCC 1 cut(s) 1520
BcnI CCSGG 9 cut(s) 149, 239, 240, 418, 1517, 1555, 1618, 1856, 1929
BcoDI GTCTC 6 cut(s) 314, 380, 917, 1264, 1544, 1856
BfaI CTAG 2 cut(s) 818, 1331
BfoI RGCGCY 4 cut(s) 871, 893, 1361, 1628
BfrI CTTAAG 1 cut(s) 689
BfuI GTATCC 1 cut(s) 1520
BglII AGATCT 1 cut(s) 670
BlpI GCTNAGC 1 cut(s) 1361
Bme18I GGWCC 8 cut(s) 151, 332, 476, 810, 969, 1408, 1831, 1941
BmeRI GACNNNNNGTC 1 cut(s) 211
BmeT110I CYCGRG 3 cut(s) 238, 731, 1315
BmgBI CACGTC 2 cut(s) 1579, 1720
BmrI ACTGGG 2 cut(s) 421, 1345
BmuI ACTGGG 2 cut(s) 421, 1345
BoxI GACNNNNGTC 1 cut(s) 1885
BpiI GAAGAC 1 cut(s) 1705
BpmI CTGGAG 3 cut(s) 368, 1124, 1625
Bpu10I CCTNAGC 1 cut(s) 1056
Bpu1102I GCTNAGC 1 cut(s) 1361
Bpu14I TTCGAA 1 cut(s) 1901
BpuMI CCSGG 9 cut(s) 149, 239, 240, 418, 1517, 1555, 1618, 1856, 1929
Bsa29I ATCGAT 1 cut(s) 1659
BsaAI YACGTR 1 cut(s) 1393
BsaHI GRCGYC 6 cut(s) 868, 890, 1085, 1143, 1325, 1637
BsaI GGTCTC 2 cut(s) 1544, 1856
BsaWI WCCGGW 4 cut(s) 329, 473, 858, 1833
BsaXI ACNNNNNCTCC 6 cut(s) 209, 239, 311, 341, 1025, 1055
Bse118I RCCGGY 4 cut(s) 282, 473, 880, 1277
Bse1I ACTGG 3 cut(s) 211, 427, 1340
Bse3DI GCAATG 1 cut(s) 1824
BseAI TCCGGA 2 cut(s) 858, 1833
BseBI CCWGG 3 cut(s) 184, 386, 566
BseCI ATCGAT 1 cut(s) 1659
BseGI GGATG 5 cut(s) 336, 561, 941, 1434, 1842
BseMI GCAATG 1 cut(s) 1824
BseMII CTCAG 7 cut(s) 56, 305, 319, 469, 558, 1047, 1352
BseNI ACTGG 3 cut(s) 211, 427, 1340
BsePI GCGCGC 2 cut(s) 1222, 1533
BseRI GAGGAG 8 cut(s) 824, 827, 1430, 1664, 1709, 1763, 1766, 1914
BseSI GKGCMC 1 cut(s) 261
BseX3I CGGCCG 2 cut(s) 280, 1445
BseXI GCAGC 7 cut(s) 10, 540, 889, 1206, 1293, 1587, 1774
BseYI CCCAGC 3 cut(s) 751, 1642, 1949
BsgI GTGCAG 3 cut(s) 163, 1697, 1781
Bsh1236I CGCG 6 cut(s) 164, 1224, 1226, 1367, 1533, 1535
Bsh1285I CGRYCG 4 cut(s) 283, 417, 917, 1448
BshFI GGCC 9 cut(s) 176, 249, 259, 282, 684, 908, 1320, 1447, 1859
BshNI GGYRCC 5 cut(s) 867, 889, 1213, 1734, 1798
BshTI ACCGGT 1 cut(s) 473
BshVI ATCGAT 1 cut(s) 1659
BsiEI CGRYCG 4 cut(s) 283, 417, 917, 1448
BsiHKCI CYCGRG 3 cut(s) 238, 731, 1315
BslFI GGGAC 8 cut(s) 112, 248, 318, 721, 1096, 1126, 1352, 1510
BsmAI GTCTC 6 cut(s) 314, 380, 917, 1264, 1544, 1856
BsmBI CGTCTC 2 cut(s) 917, 1264
BsmFI GGGAC 8 cut(s) 112, 248, 318, 721, 1096, 1126, 1352, 1510
BsmI GAATGC 1 cut(s) 653
BsnI GGCC 9 cut(s) 176, 249, 259, 282, 684, 908, 1320, 1447, 1859
Bso31I GGTCTC 2 cut(s) 1544, 1856
BsoBI CYCGRG 3 cut(s) 238, 731, 1315
Bsp119I TTCGAA 1 cut(s) 1901
Bsp120I GGGCCC 1 cut(s) 257
Bsp1286I GDGCHC 2 cut(s) 261, 1482
Bsp13I TCCGGA 2 cut(s) 858, 1833
Bsp1407I TGTACA 1 cut(s) 1581
Bsp143I GATC 8 cut(s) 618, 670, 1656, 1773, 1804, 1839, 1894, 1907
Bsp1720I GCTNAGC 1 cut(s) 1361
Bsp19I CCATGG 1 cut(s) 1779
BspANI GGCC 9 cut(s) 176, 249, 259, 282, 684, 908, 1320, 1447, 1859
BspCNI CTCAG 7 cut(s) 57, 304, 318, 468, 557, 1048, 1353
BspDI ATCGAT 1 cut(s) 1659
BspEI TCCGGA 2 cut(s) 858, 1833
BspFNI CGCG 6 cut(s) 164, 1224, 1226, 1367, 1533, 1535
BspPI GGATC 4 cut(s) 613, 1664, 1889, 1915
BspQI GCTCTTC 1 cut(s) 1496
BspT104I TTCGAA 1 cut(s) 1901
BspT107I GGYRCC 5 cut(s) 867, 889, 1213, 1734, 1798
BspTI CTTAAG 1 cut(s) 689
BspTNI GGTCTC 2 cut(s) 1544, 1856
BsrBI CCGCTC 4 cut(s) 436, 722, 815, 1489
BsrDI GCAATG 1 cut(s) 1824
BsrFI RCCGGY 4 cut(s) 282, 473, 880, 1277
BsrGI TGTACA 1 cut(s) 1581
BsrI ACTGG 3 cut(s) 211, 427, 1340
BssAI RCCGGY 4 cut(s) 282, 473, 880, 1277
BssHII GCGCGC 2 cut(s) 1222, 1533
BssMI GATC 8 cut(s) 618, 670, 1656, 1773, 1804, 1839, 1894, 1907
BssNI GRCGYC 6 cut(s) 868, 890, 1085, 1143, 1325, 1637
BssT1I CCWWGG 1 cut(s) 1779
Bst2UI CCWGG 3 cut(s) 184, 386, 566
Bst6I CTCTTC 3 cut(s) 851, 1151, 1496
BstACI GRCGYC 6 cut(s) 868, 890, 1085, 1143, 1325, 1637
BstAFI CTTAAG 1 cut(s) 689
BstAUI TGTACA 1 cut(s) 1581
BstBAI YACGTR 1 cut(s) 1393
BstBI TTCGAA 1 cut(s) 1901
BstDEI CTNAG 9 cut(s) 65, 291, 305, 455, 544, 667, 1056, 1361, 1968
BstDSI CCRYGG 6 cut(s) 804, 1300, 1411, 1667, 1779, 1794
BstENI CCTNNNNNAGG 1 cut(s) 1902
BstF5I GGATG 5 cut(s) 336, 561, 941, 1434, 1842
BstFNI CGCG 6 cut(s) 164, 1224, 1226, 1367, 1533, 1535
BstH2I RGCGCY 4 cut(s) 871, 893, 1361, 1628
BstKTI GATC 8 cut(s) 621, 673, 1659, 1776, 1807, 1842, 1897, 1910
BstMAI GTCTC 6 cut(s) 314, 380, 917, 1264, 1544, 1856
BstMBI GATC 8 cut(s) 618, 670, 1656, 1773, 1804, 1839, 1894, 1907
BstMCI CGRYCG 4 cut(s) 283, 417, 917, 1448
BstNI CCWGG 3 cut(s) 184, 386, 566
BstNSI RCATGY 2 cut(s) 143, 1273
BstPAI GACNNNNGTC 1 cut(s) 1885
BstSLI GKGCMC 1 cut(s) 261
BstUI CGCG 6 cut(s) 164, 1224, 1226, 1367, 1533, 1535
BstV1I GCAGC 7 cut(s) 10, 540, 889, 1206, 1293, 1587, 1774
BstV2I GAAGAC 1 cut(s) 1705
BstX2I RGATCY 1 cut(s) 670
BstXI CCANNNNNNTGG 2 cut(s) 805, 1335
BstYI RGATCY 1 cut(s) 670
BstZI CGGCCG 2 cut(s) 280, 1445
Bsu15I ATCGAT 1 cut(s) 1659
BsuI GTATCC 1 cut(s) 1520
BsuRI GGCC 9 cut(s) 176, 249, 259, 282, 684, 908, 1320, 1447, 1859
BsuTUI ATCGAT 1 cut(s) 1659
BtgI CCRYGG 6 cut(s) 804, 1300, 1411, 1667, 1779, 1794
BtgZI GCGATG 1 cut(s) 784
BtrI CACGTC 2 cut(s) 1579, 1720
BtsCI GGATG 5 cut(s) 336, 561, 941, 1434, 1842
BtsI GCAGTG 1 cut(s) 15
BtsIMutI CAGTG 2 cut(s) 15, 62
Cfr10I RCCGGY 4 cut(s) 282, 473, 880, 1277
Cfr9I CCCGGG 1 cut(s) 238
ClaI ATCGAT 1 cut(s) 1659
CpoI CGGWCCG 1 cut(s) 476
CseI GACGC 6 cut(s) 153, 1038, 1333, 1466, 1626, 1942
Csp6I GTAC 6 cut(s) 518, 842, 1090, 1582, 1735, 1799
CspAI ACCGGT 1 cut(s) 473
CspI CGGWCCG 1 cut(s) 476
CviAII CATG 3 cut(s) 140, 1270, 1780
CviQI GTAC 6 cut(s) 518, 842, 1090, 1582, 1735, 1799
DdeI CTNAG 9 cut(s) 65, 291, 305, 455, 544, 667, 1056, 1361, 1968
DinI GGCGCC 2 cut(s) 869, 891
DpnI GATC 8 cut(s) 620, 672, 1658, 1775, 1806, 1841, 1896, 1909
DpnII GATC 8 cut(s) 618, 670, 1656, 1773, 1804, 1839, 1894, 1907
DraIII CACNNNGTG 1 cut(s) 68
DrdI GACNNNNNNGTC 1 cut(s) 330
DriI GACNNNNNGTC 1 cut(s) 211
DseDI GACNNNNNNGTC 1 cut(s) 330
EaeI YGGCCR 3 cut(s) 280, 906, 1445
EagI CGGCCG 2 cut(s) 280, 1445
Eam1104I CTCTTC 3 cut(s) 851, 1151, 1496
Eam1105I GACNNNNNGTC 1 cut(s) 211
EarI CTCTTC 3 cut(s) 851, 1151, 1496
EciI GGCGGA 5 cut(s) 221, 995, 1026, 1264, 1721
EclXI CGGCCG 2 cut(s) 280, 1445
Eco130I CCWWGG 1 cut(s) 1779
Eco24I GRGCYC 2 cut(s) 261, 1482
Eco31I GGTCTC 2 cut(s) 1544, 1856
Eco47I GGWCC 8 cut(s) 151, 332, 476, 810, 969, 1408, 1831, 1941
Eco47III AGCGCT 1 cut(s) 1359
Eco52I CGGCCG 2 cut(s) 280, 1445
Eco57I CTGAAG 1 cut(s) 1157
Eco72I CACGTG 1 cut(s) 1393
Eco88I CYCGRG 3 cut(s) 238, 731, 1315
EcoNI CCTNNNNNAGG 1 cut(s) 1902
EcoO109I RGGNCCY 1 cut(s) 1941
EcoRII CCWGG 3 cut(s) 182, 384, 564
EcoT14I CCWWGG 1 cut(s) 1779
EcoT38I GRGCYC 2 cut(s) 261, 1482
EgeI GGCGCC 2 cut(s) 869, 891
EheI GGCGCC 2 cut(s) 869, 891
ErhI CCWWGG 1 cut(s) 1779
Esp3I CGTCTC 2 cut(s) 917, 1264
FaeI CATG 3 cut(s) 143, 1273, 1783
FaiI YATR 7 cut(s) 141, 746, 1271, 1349, 1781, 1850, 1920
FalI AAGNNNNNCTT 2 cut(s) 99, 131
FaqI GGGAC 8 cut(s) 112, 248, 318, 721, 1096, 1126, 1352, 1510
FatI CATG 3 cut(s) 139, 1269, 1779
FblI GTMKAC 1 cut(s) 222
FokI GGATG 5 cut(s) 323, 548, 928, 1421, 1849
FriOI GRGCYC 2 cut(s) 261, 1482
FspBI CTAG 2 cut(s) 818, 1331
GsaI CCCAGC 3 cut(s) 755, 1646, 1953
GsuI CTGGAG 3 cut(s) 368, 1124, 1625
HaeII RGCGCY 4 cut(s) 871, 893, 1361, 1628
HaeIII GGCC 9 cut(s) 176, 249, 259, 282, 684, 908, 1320, 1447, 1859
HgaI GACGC 6 cut(s) 153, 1038, 1333, 1466, 1626, 1942
Hin1I GRCGYC 6 cut(s) 868, 890, 1085, 1143, 1325, 1637
Hin1II CATG 3 cut(s) 143, 1273, 1783
HincII GTYRAC 2 cut(s) 82, 1614
HindII GTYRAC 2 cut(s) 82, 1614
HinfI GANTC 9 cut(s) 78, 94, 133, 192, 289, 324, 391, 481, 734
HpaI GTTAAC 1 cut(s) 1614
HphI GGTGA 4 cut(s) 416, 463, 1138, 1658
Hpy166II GTNNAC 9 cut(s) 82, 223, 972, 1018, 1411, 1582, 1614, 1701, 1794
Hpy188III TCNNGA 7 cut(s) 98, 660, 859, 1168, 1237, 1495, 1834
Hpy8I GTNNAC 9 cut(s) 82, 223, 972, 1018, 1411, 1582, 1614, 1701, 1794
HpyAV CCTTC 8 cut(s) 880, 1063, 1103, 1132, 1234, 1304, 1552, 1908
HpyCH4IV ACGT 8 cut(s) 219, 591, 1085, 1143, 1392, 1565, 1578, 1719
HpyCH4V TGCA 6 cut(s) 180, 653, 699, 1678, 1762, 1822
HpyF3I CTNAG 9 cut(s) 65, 291, 305, 455, 544, 667, 1056, 1361, 1968
HpySE526I ACGT 8 cut(s) 219, 591, 1085, 1143, 1392, 1565, 1578, 1719
Hsp92I GRCGYC 6 cut(s) 868, 890, 1085, 1143, 1325, 1637
Hsp92II CATG 3 cut(s) 143, 1273, 1783
KasI GGCGCC 2 cut(s) 867, 889
Kpn2I TCCGGA 2 cut(s) 858, 1833
KpnI GGTACC 2 cut(s) 1738, 1802
KroI GCCGGC 3 cut(s) 282, 880, 1277
KroNI GCCGGC 3 cut(s) 284, 882, 1279
KspAI GTTAAC 1 cut(s) 1614
Kzo9I GATC 8 cut(s) 618, 670, 1656, 1773, 1804, 1839, 1894, 1907
LguI GCTCTTC 1 cut(s) 1496
LmnI GCTCC 9 cut(s) 88, 372, 433, 464, 574, 721, 727, 1606, 1723
Lsp1109I GCAGC 7 cut(s) 10, 540, 889, 1206, 1293, 1587, 1774
MaeI CTAG 2 cut(s) 818, 1331
MaeII ACGT 8 cut(s) 219, 591, 1085, 1143, 1392, 1565, 1578, 1719
MaeIII GTNAC 5 cut(s) 60, 1150, 1561, 1875, 1954
MalI GATC 8 cut(s) 620, 672, 1658, 1775, 1806, 1841, 1896, 1909
MbiI CCGCTC 4 cut(s) 436, 722, 815, 1489
MboI GATC 8 cut(s) 618, 670, 1656, 1773, 1804, 1839, 1894, 1907
MboII GAAGA 7 cut(s) 838, 994, 1168, 1204, 1483, 1705, 1856
MflI RGATCY 1 cut(s) 670
MhlI GDGCHC 2 cut(s) 261, 1482
MlsI TGGCCA 1 cut(s) 908
MluCI AATT 2 cut(s) 395, 1250
MluI ACGCGT 1 cut(s) 162
MluNI TGGCCA 1 cut(s) 908
Mly113I GGCGCC 2 cut(s) 868, 890
MlyI GAGTC 5 cut(s) 87, 127, 283, 318, 743
MmeI TCCRAC 8 cut(s) 169, 378, 411, 437, 486, 1455, 1494, 1599
Mox20I TGGCCA 1 cut(s) 908
MroI TCCGGA 2 cut(s) 858, 1833
MroNI GCCGGC 3 cut(s) 282, 880, 1277
MscI TGGCCA 1 cut(s) 908
MseI TTAA 4 cut(s) 690, 1197, 1422, 1613
MslI CAYNNNNRTG 2 cut(s) 803, 1206
Msp20I TGGCCA 1 cut(s) 908
MspA1I CMGCKG 1 cut(s) 1219
MspCI CTTAAG 1 cut(s) 689
Mva1269I GAATGC 1 cut(s) 653
MvaI CCWGG 3 cut(s) 184, 386, 566
MvnI CGCG 6 cut(s) 164, 1224, 1226, 1367, 1533, 1535
NaeI GCCGGC 3 cut(s) 284, 882, 1279
NarI GGCGCC 2 cut(s) 868, 890
NciI CCSGG 9 cut(s) 149, 239, 240, 418, 1517, 1555, 1618, 1856, 1929
NcoI CCATGG 1 cut(s) 1779
NdeII GATC 8 cut(s) 618, 670, 1656, 1773, 1804, 1839, 1894, 1907
NgoMIV GCCGGC 3 cut(s) 282, 880, 1277
NlaIII CATG 3 cut(s) 143, 1273, 1783
NmeAIII GCCGAG 2 cut(s) 258, 1885
NmuCI GTSAC 3 cut(s) 60, 1561, 1954
NspI RCATGY 2 cut(s) 143, 1273
NspV TTCGAA 1 cut(s) 1901
PauI GCGCGC 2 cut(s) 1222, 1533
PciI ACATGT 1 cut(s) 1269
PciSI GCTCTTC 1 cut(s) 1496
PcsI WCGNNNNNNNCGW 3 cut(s) 258, 801, 1461
PctI GAATGC 1 cut(s) 653
PdiI GCCGGC 3 cut(s) 284, 882, 1279
PfeI GAWTC 4 cut(s) 94, 192, 391, 481
PinAI ACCGGT 1 cut(s) 473
PleI GAGTC 5 cut(s) 86, 127, 283, 318, 742
PluTI GGCGCC 2 cut(s) 871, 893
PmaCI CACGTG 1 cut(s) 1393
PmlI CACGTG 1 cut(s) 1393
PpsI GAGTC 5 cut(s) 86, 127, 283, 318, 742
Ppu21I YACGTR 1 cut(s) 1393
PpuMI RGGWCCY 1 cut(s) 1941
PscI ACATGT 1 cut(s) 1269
PshAI GACNNNNGTC 1 cut(s) 1885
Psp1406I AACGTT 1 cut(s) 591
Psp5II RGGWCCY 1 cut(s) 1941
Psp6I CCWGG 3 cut(s) 182, 384, 564
PspCI CACGTG 1 cut(s) 1393
PspFI CCCAGC 3 cut(s) 751, 1642, 1949
PspGI CCWGG 3 cut(s) 182, 384, 564
PspOMI GGGCCC 1 cut(s) 257
PspPPI RGGWCCY 1 cut(s) 1941
PsuI RGATCY 1 cut(s) 670
PteI GCGCGC 2 cut(s) 1222, 1533
RsaI GTAC 6 cut(s) 519, 843, 1091, 1583, 1736, 1800
RsaNI GTAC 6 cut(s) 518, 842, 1090, 1582, 1735, 1799
RseI CAYNNNNRTG 2 cut(s) 803, 1206
Rsr2I CGGWCCG 1 cut(s) 476
RsrII CGGWCCG 1 cut(s) 476
SapI GCTCTTC 1 cut(s) 1496
SaqAI TTAA 4 cut(s) 690, 1197, 1422, 1613
Sau3AI GATC 8 cut(s) 618, 670, 1656, 1773, 1804, 1839, 1894, 1907
SchI GAGTC 5 cut(s) 87, 127, 283, 318, 743
SduI GDGCHC 2 cut(s) 261, 1482
SfoI GGCGCC 2 cut(s) 869, 891
SfuI TTCGAA 1 cut(s) 1901
SinI GGWCC 8 cut(s) 151, 332, 476, 810, 969, 1408, 1831, 1941
SmaI CCCGGG 1 cut(s) 240
SmiMI CAYNNNNRTG 2 cut(s) 803, 1206
SmlI CTYRAG 1 cut(s) 689
SmoI CTYRAG 1 cut(s) 689
Sse9I AATT 2 cut(s) 395, 1250
SspDI GGCGCC 2 cut(s) 867, 889
SspMI CTAG 2 cut(s) 818, 1331
StyI CCWWGG 1 cut(s) 1779
TaiI ACGT 8 cut(s) 222, 594, 1088, 1146, 1395, 1568, 1581, 1722
TaqII GACCGA 1 cut(s) 1880
TasI AATT 2 cut(s) 395, 1250
TatI WGTACW 1 cut(s) 1581
TauI GCSGC 5 cut(s) 788, 1135, 1219, 1370, 1510
TfiI GAWTC 4 cut(s) 94, 192, 391, 481
Tru1I TTAA 4 cut(s) 690, 1197, 1422, 1613
Tru9I TTAA 4 cut(s) 690, 1197, 1422, 1613
TscAI CASTG 2 cut(s) 15, 69
TseFI GTSAC 3 cut(s) 60, 1561, 1954
TseI GCWGC 7 cut(s) 23, 553, 877, 1219, 1281, 1600, 1762
Tsp45I GTSAC 3 cut(s) 60, 1561, 1954
TspDTI ATGAA 2 cut(s) 1364, 1865
TspGWI ACGGA 4 cut(s) 302, 714, 941, 1453
TspMI CCCGGG 1 cut(s) 238
TspRI CASTG 2 cut(s) 15, 69
Vha464I CTTAAG 1 cut(s) 689
VpaK11BI GGWCC 8 cut(s) 151, 332, 476, 810, 969, 1408, 1831, 1941
XagI CCTNNNNNAGG 1 cut(s) 1902
XceI RCATGY 2 cut(s) 143, 1273
XmaI CCCGGG 1 cut(s) 238
XmiI GTMKAC 1 cut(s) 222
XspI CTAG 2 cut(s) 818, 1331
ZraI GACGTC 2 cut(s) 1086, 1144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.