MD02G1248000.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0011464
Physical Location & Seq
Reverse (-)
29823833 .. 29838294
14462 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1248000.v1.1.491

Sequence Viewer

Length: 2211 bp
ATGCATAATTCTAATCAGGACTCGCAAGATCAGAGGAGTATGGAGGATTCCAGTGCAATGACGATTGAGTTTCTTCGGGCACGGTTGCTGTCTGAGAGGTCCGTTTCAAGAAGTGCAAGACAGAGAGTTAATGAGCTGGAAAAAATGGTAGAAGAACTGGAGGAACAACTTAAGATTGTTTCTCTTCAAAGAAAAATGGCCGAGAAAGCCACAGCAGATGTTCTTGCCATTTTGGAGAACCAAGGGGCAAGTGACATTTCAGAAGAATTTGATTCCAGCTCTGATCATGAAACACACCAGGGATCCAAAGTGGGTAATAACTTGACAAATGAAGAAGAAAGCTTTGAAATTTCGAAGGCGAGAAGAAACGATCAGGAGGAACTTTCGGGTTCTGATGCTGATTCTTCTCGAATACCTAGTAGAAGCTTGTCTTGGAAAGGGCGCATTGAATCTCCACGTTCTCAGGAAAAGTATAAGGATCTATCCACTAGAAGACGTAGCAATTTTTCATCCATGGGTTCAAGTTCTCCAAGACATCACCTTGGAAAATCCTGCCGCCAAATAAAACACAAAGAAACAAGATCAGACAAGTTTGATCCTCAAGAAAATGGTGTTTCTGCTTCTTCAGAAGGGCTTCCAAATGGCCTATACGGTGGGCCTGAGAAATTGAGAGAAAGTTCTGAATTCCCAGAAGGGAAAATTTTATCAAATGGTGTGCTGTCAGGGACCATTGAAAGACAAAGAAATAGGGACCTGGATTTCAGTGGGCATGGAAGAGACAAAAATATGGAAAAAGCACTAGAACATCAGGCGCAACTTATTTGTCAAAATGAAGAGATGGAGAAGGCTCAAAGAGAATGGGAAGAGAAGTTTAGAGAAAATAATACCAGTACACCGGATTCATGTGACCCTGGGAACCATTCCGATATCACCGAGGAAAGAGATGAGATAAAGGCACAAATGCCATCTCCTGCCCAGGTGACTGCTGCCCAAGCTCAAGAGTCAAAGTCAGCAGAAGGAGATGTCTGCCTACCTAAGGAAACAGTCAAAATTCAGTCTAACGGTTTTCTATTAGCTTCACATATAGATACGGGAGGGTTGCAGGATAATCTGAGTAGAAACTCTGTTGCTTCCTCACAAGTTCAAGAATTTGCATTCCCTGGGGCAAATGGAAAGCAAAATCAAGAGAGCACAGAAAATTATGCTCGGCACTCTTCACGTGGCTCCCACCCTGACCAACTTCTGCATCAGTCAGCCCACAAACATACATCAGATGCCTTGTCTTCTGATGCTGGCTATGGTTTCCATAAAGGAAATGCTTCAGGGAGCAGAAACGACCTATATGCATTGGTGCCTCATGACTCGCAGGATAAGTTGGGTGGTGTACTGGATGCACTTAAACAAGCAAGGCTATCACTACAACAGACAATGACTAGATTGCCGCTAGTAGATGGTACATCTGCACACAAGTCCATTGAACCATCTATTCCTGCTACGAAAACTGTAGACAGAGTAGAGATTCCTGTTGGGTGTGCCGGGCTTTTCAGACTACCAACTGATTTTGCAGTTGAAGAAGCTGCGGCTCACAATAGCTACTTTGGTTCTTCTGGCTTACTGTCTGCAAGGCATTTTCCTGAAAATAGGGTTTCAGTTACTCCTGATGCGTTTGTCACGAGTCCTTATGTTGAGACTAGACCAACCTTCTCTACTAATGCTGCTGATCGATTCTCCACCAGTCAATATATTGAGCCAACTTTTTCTACTAGTGCTGCTGATCGATACGTTACCAGTCAATACATTGAACCCAGGCCAACATTTTCTGCTACTGGGGCTGATCGATCCGCCATCAATCCTTATGTTGAGACTAGACCAAATTTTCCAACTACTGCGGCAGTAATATTTCCCAGTAGCCCTAACGTCGATACCAGATCAAATTTTTCAGCAGATAATAGATTTATAGCTGGGCGTTATGCAGATTCTGGGTCAAGAGTTTCTCCGCTGCTGCCACATATTGATCCTTACTTTGATATGGGGCTGCCCTCGTCGAGGTTTACCAATCCTCTCTATTCCAACTATCCCTCTGTTCCAGACCCGACGCCATGGATGACATCTGATGAAGGATTAACGAGAGCCCTACCAAGAAGGCCAGTTGGGGCACCAACAGATCGGTATTCATATTACGATCATACTCGACCTAATATGTACAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

737

Amino Acids

81.6

Weight (kDa)

5.67

Isoelectric Point (pI)

59.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52240
fragaria_vesca FvH4_7g05860 FvH4_7g05860
malus_domestica MD02G1248000.v1.1 MD07G1068100.v1.1
prunus_persica Prupe.2G085400_v2.0.a1
pyrus_communis pycom02g21240 pycom07g05220
rosa_chinensis RchiOBHm_Chr1g0333121
rosa_laevigata RLG00000029625
rosa_multiflora Rmu_sc0007432.1_g000002
rosa_roxburghii Rroxscaffold_4G00317780
rosa_rugosa Rorug01G0107100 Rorug01G0107100 Rorug01G0107200
rosa_samantha Rh1AG130500 Rh1BG099600 Rh1CG124300 Rh1DG135800
rosa_wichuraiana Rw1G010250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1351, 2155
AccI GTMKAC 1 cut(s) 1506
AciI CCGC 6 cut(s) 556, 1442, 1580, 1842, 1889, 1997
AclWI GGATC 6 cut(s) 297, 310, 486, 590, 1833, 2009
AcoI YGGCCR 1 cut(s) 198
AcsI RAATTY 8 cut(s) 266, 348, 683, 699, 1050, 1148, 1873, 1933
AcuI CTGAAG 2 cut(s) 609, 1305
AcvI CACGTG 1 cut(s) 1220
AcyI GRCGYC 1 cut(s) 2096
AfaI GTAC 4 cut(s) 892, 1386, 1456, 2204
AfiI CCNNNNNNNGG 2 cut(s) 1036, 2046
AflII CTTAAG 1 cut(s) 170
AhlI ACTAGT 1 cut(s) 1763
AjnI CCWGG 6 cut(s) 297, 753, 910, 975, 1159, 1805
AjuI GAANNNNNNNTTGG 2 cut(s) 415, 447
AluBI AGCT 9 cut(s) 136, 279, 342, 426, 995, 1076, 1577, 1593, 1961
AluI AGCT 9 cut(s) 136, 279, 342, 426, 995, 1076, 1577, 1593, 1961
Alw21I GWGCWC 1 cut(s) 1193
Alw26I GTCTC 3 cut(s) 771, 1682, 1856
AlwI GGATC 6 cut(s) 297, 310, 486, 590, 1833, 2009
AlwNI CAGNNNCTG 1 cut(s) 1979
AoxI GGCC 5 cut(s) 198, 643, 656, 1808, 2144
ApeKI GCWGC 7 cut(s) 986, 1577, 1715, 1769, 1999, 2002, 2035
ApoI RAATTY 8 cut(s) 266, 348, 683, 699, 1050, 1148, 1873, 1933
Asp700I GAANNNNTTC 2 cut(s) 633, 1318
AspLEI GCGC 2 cut(s) 444, 814
AspS9I GGNCC 4 cut(s) 99, 656, 726, 751
AsuC2I CCSGG 1 cut(s) 1537
AsuHPI GGTGA 3 cut(s) 530, 922, 991
AsuII TTCGAA 1 cut(s) 353
AvaII GGWCC 3 cut(s) 99, 726, 751
AxyI CCTNAGG 1 cut(s) 1035
BaeGI GKGCMC 2 cut(s) 82, 2158
BamHI GGATCC 1 cut(s) 302
BanI GGYRCC 2 cut(s) 1351, 2155
BanII GRGCYC 1 cut(s) 2134
BauI CACGAG 1 cut(s) 1672
BbrPI CACGTG 1 cut(s) 1220
BbsI GAAGAC 2 cut(s) 499, 1275
Bbv12I GWGCWC 1 cut(s) 1193
BbvI GCAGC 7 cut(s) 973, 1564, 1702, 1756, 1986, 1989, 2022
BccI CCATC 5 cut(s) 832, 973, 1445, 1489, 1853
BcgI CGANNNNNNTGC 2 cut(s) 1325, 1359
BciT130I CCWGG 6 cut(s) 299, 755, 912, 977, 1161, 1807
BclI TGATCA 1 cut(s) 283
BcnI CCSGG 1 cut(s) 1537
BcoDI GTCTC 3 cut(s) 771, 1682, 1856
BcuI ACTAGT 1 cut(s) 1763
BfaI CTAG 8 cut(s) 417, 489, 800, 1434, 1445, 1692, 1764, 1866
BfmI CTRYAG 1 cut(s) 1503
BfrI CTTAAG 1 cut(s) 170
Bme1390I CCNGG 7 cut(s) 299, 755, 912, 977, 1161, 1537, 1807
Bme18I GGWCC 3 cut(s) 99, 726, 751
BmgT120I GGNCC 4 cut(s) 99, 656, 726, 751
BmiI GGNNCC 7 cut(s) 304, 727, 752, 917, 1225, 1353, 2157
BmrFI CCNGG 7 cut(s) 299, 755, 912, 977, 1161, 1537, 1807
BmrI ACTGGG 2 cut(s) 1836, 1899
BmsI GCATC 6 cut(s) 385, 1255, 1264, 1279, 1381, 1651
BmuI ACTGGG 2 cut(s) 1836, 1899
BpiI GAAGAC 2 cut(s) 499, 1275
BpmI CTGGAG 1 cut(s) 179
Bpu14I TTCGAA 1 cut(s) 353
BpuEI CTTGAG 2 cut(s) 585, 981
BpuMI CCSGG 1 cut(s) 1537
Bsa29I ATCGAT 3 cut(s) 1723, 1777, 1837
BsaAI YACGTR 1 cut(s) 1220
BsaHI GRCGYC 1 cut(s) 2096
BsaWI WCCGGW 1 cut(s) 895
Bsc4I CCNNNNNNNGG 2 cut(s) 1036, 2046
Bse1I ACTGG 9 cut(s) 51, 162, 888, 1392, 1734, 1788, 1831, 1905, 2147
Bse21I CCTNAGG 1 cut(s) 1035
Bse3DI GCAATG 1 cut(s) 63
BseBI CCWGG 6 cut(s) 299, 755, 912, 977, 1161, 1807
BseCI ATCGAT 3 cut(s) 1723, 1777, 1837
BseGI GGATG 3 cut(s) 509, 1396, 2109
BseLI CCNNNNNNNGG 2 cut(s) 1036, 2046
BseMI GCAATG 1 cut(s) 63
BseMII CTCAG 4 cut(s) 84, 476, 651, 1103
BseNI ACTGG 9 cut(s) 51, 162, 888, 1392, 1734, 1788, 1831, 1905, 2147
BseRI GAGGAG 1 cut(s) 49
BseSI GKGCMC 2 cut(s) 82, 2158
BseXI GCAGC 7 cut(s) 973, 1564, 1702, 1756, 1986, 1989, 2022
BseYI CCCAGC 1 cut(s) 1961
BsgI GTGCAG 1 cut(s) 1446
BshFI GGCC 5 cut(s) 200, 645, 658, 1810, 2146
BshNI GGYRCC 2 cut(s) 1351, 2155
BshVI ATCGAT 3 cut(s) 1723, 1777, 1837
BsiHKAI GWGCWC 1 cut(s) 1193
BsiSI CCGG 2 cut(s) 896, 1536
BslFI GGGAC 2 cut(s) 739, 764
BslI CCNNNNNNNGG 2 cut(s) 1036, 2046
BsmAI GTCTC 3 cut(s) 771, 1682, 1856
BsmFI GGGAC 2 cut(s) 739, 764
BsmI GAATGC 1 cut(s) 1154
BsnI GGCC 5 cut(s) 200, 645, 658, 1810, 2146
Bsp119I TTCGAA 1 cut(s) 353
Bsp1286I GDGCHC 4 cut(s) 82, 1193, 2134, 2158
Bsp1407I TGTACA 1 cut(s) 2202
Bsp19I CCATGG 2 cut(s) 513, 2099
BspACI CCGC 6 cut(s) 556, 1442, 1580, 1842, 1889, 1997
BspANI GGCC 5 cut(s) 200, 645, 658, 1810, 2146
BspCNI CTCAG 4 cut(s) 85, 475, 652, 1104
BspDI ATCGAT 3 cut(s) 1723, 1777, 1837
BspHI TCATGA 2 cut(s) 286, 1357
BspLI GGNNCC 7 cut(s) 304, 727, 752, 917, 1225, 1353, 2157
BspPI GGATC 6 cut(s) 297, 310, 486, 590, 1833, 2009
BspT104I TTCGAA 1 cut(s) 353
BspT107I GGYRCC 2 cut(s) 1351, 2155
BspTI CTTAAG 1 cut(s) 170
BsrDI GCAATG 1 cut(s) 63
BsrGI TGTACA 1 cut(s) 2202
BsrI ACTGG 9 cut(s) 51, 162, 888, 1392, 1734, 1788, 1831, 1905, 2147
BssNI GRCGYC 1 cut(s) 2096
BssSI CACGAG 1 cut(s) 1672
BssT1I CCWWGG 4 cut(s) 241, 513, 541, 2099
Bst2BI CACGAG 1 cut(s) 1672
Bst2UI CCWGG 6 cut(s) 299, 755, 912, 977, 1161, 1807
Bst4CI ACNGT 6 cut(s) 84, 653, 1045, 1064, 1504, 1617
Bst6I CTCTTC 5 cut(s) 189, 769, 828, 858, 1219
BstACI GRCGYC 1 cut(s) 2096
BstAFI CTTAAG 1 cut(s) 170
BstAUI TGTACA 1 cut(s) 2202
BstBAI YACGTR 1 cut(s) 1220
BstBI TTCGAA 1 cut(s) 353
BstC8I GCNNGC 1 cut(s) 1294
BstDEI CTNAG 5 cut(s) 93, 462, 660, 1035, 1112
BstDSI CCRYGG 2 cut(s) 513, 2099
BstENI CCTNNNNNAGG 2 cut(s) 1034, 2044
BstF5I GGATG 3 cut(s) 509, 1396, 2109
BstHHI GCGC 2 cut(s) 444, 814
BstMAI GTCTC 3 cut(s) 771, 1682, 1856
BstMWI GCNNNNNNNGC 3 cut(s) 206, 992, 1829
BstNI CCWGG 6 cut(s) 299, 755, 912, 977, 1161, 1807
BstSCI CCNGG 7 cut(s) 297, 753, 910, 975, 1159, 1535, 1805
BstSFI CTRYAG 1 cut(s) 1503
BstSLI GKGCMC 2 cut(s) 82, 2158
BstV1I GCAGC 7 cut(s) 973, 1564, 1702, 1756, 1986, 1989, 2022
BstV2I GAAGAC 2 cut(s) 499, 1275
BstX2I RGATCY 2 cut(s) 302, 478
BstYI RGATCY 2 cut(s) 302, 478
Bsu15I ATCGAT 3 cut(s) 1723, 1777, 1837
Bsu36I CCTNAGG 1 cut(s) 1035
BsuRI GGCC 5 cut(s) 200, 645, 658, 1810, 2146
BsuTUI ATCGAT 3 cut(s) 1723, 1777, 1837
BtgI CCRYGG 2 cut(s) 513, 2099
BtsCI GGATG 3 cut(s) 509, 1396, 2109
BtsIMutI CAGTG 2 cut(s) 58, 769
Cac8I GCNNGC 1 cut(s) 1294
CaiI CAGNNNCTG 1 cut(s) 1979
CciI TCATGA 2 cut(s) 286, 1357
CfoI GCGC 2 cut(s) 444, 814
Cfr13I GGNCC 4 cut(s) 99, 656, 726, 751
ClaI ATCGAT 3 cut(s) 1723, 1777, 1837
CseI GACGC 1 cut(s) 2104
Csp6I GTAC 4 cut(s) 891, 1385, 1455, 2203
CviAII CATG 6 cut(s) 287, 514, 770, 903, 1358, 2100
CviQI GTAC 4 cut(s) 891, 1385, 1455, 2203
DdeI CTNAG 5 cut(s) 93, 462, 660, 1035, 1112
EaeI YGGCCR 1 cut(s) 198
Eam1104I CTCTTC 5 cut(s) 189, 769, 828, 858, 1219
EarI CTCTTC 5 cut(s) 189, 769, 828, 858, 1219
EciI GGCGGA 1 cut(s) 1831
Eco130I CCWWGG 4 cut(s) 241, 513, 541, 2099
Eco24I GRGCYC 1 cut(s) 2134
Eco32I GATATC 1 cut(s) 928
Eco47I GGWCC 3 cut(s) 99, 726, 751
Eco57I CTGAAG 2 cut(s) 609, 1305
Eco72I CACGTG 1 cut(s) 1220
Eco81I CCTNAGG 1 cut(s) 1035
EcoNI CCTNNNNNAGG 2 cut(s) 1034, 2044
EcoO109I RGGNCCY 1 cut(s) 751
EcoRI GAATTC 1 cut(s) 683
EcoRII CCWGG 6 cut(s) 297, 753, 910, 975, 1159, 1805
EcoRV GATATC 1 cut(s) 928
EcoT14I CCWWGG 4 cut(s) 241, 513, 541, 2099
EcoT22I ATGCAT 2 cut(s) 6, 1348
EcoT38I GRGCYC 1 cut(s) 2134
ErhI CCWWGG 4 cut(s) 241, 513, 541, 2099
FaeI CATG 6 cut(s) 290, 517, 773, 906, 1361, 2103
FalI AAGNNNNNCTT 2 cut(s) 415, 447
FaqI GGGAC 2 cut(s) 739, 764
FatI CATG 6 cut(s) 286, 513, 769, 902, 1357, 2099
FbaI TGATCA 1 cut(s) 283
FblI GTMKAC 1 cut(s) 1506
FokI GGATG 3 cut(s) 496, 1403, 2116
FriOI GRGCYC 1 cut(s) 2134
FspBI CTAG 8 cut(s) 417, 489, 800, 1434, 1445, 1692, 1764, 1866
GlaI GCGC 2 cut(s) 443, 813
GsaI CCCAGC 1 cut(s) 1965
GsuI CTGGAG 1 cut(s) 179
HaeIII GGCC 5 cut(s) 200, 645, 658, 1810, 2146
HapII CCGG 2 cut(s) 896, 1536
HgaI GACGC 1 cut(s) 2104
HhaI GCGC 2 cut(s) 444, 814
Hin1I GRCGYC 1 cut(s) 2096
Hin1II CATG 6 cut(s) 290, 517, 773, 906, 1361, 2103
Hin6I GCGC 2 cut(s) 442, 812
HinP1I GCGC 2 cut(s) 442, 812
HindIII AAGCTT 2 cut(s) 340, 424
HpaII CCGG 2 cut(s) 896, 1536
HphI GGTGA 3 cut(s) 530, 922, 991
Hpy166II GTNNAC 4 cut(s) 893, 1385, 1507, 2052
Hpy8I GTNNAC 4 cut(s) 893, 1385, 1507, 2052
Hpy99I CGWCG 3 cut(s) 1922, 2047, 2098
HpyAV CCTTC 8 cut(s) 349, 623, 686, 838, 1010, 1711, 2111, 2136
HpyCH4III ACNGT 6 cut(s) 84, 653, 1045, 1064, 1504, 1617
HpyCH4IV ACGT 5 cut(s) 457, 496, 1219, 1782, 1917
HpyF10VI GCNNNNNNNGC 3 cut(s) 206, 992, 1829
HpyF3I CTNAG 5 cut(s) 93, 462, 660, 1035, 1112
HpySE526I ACGT 5 cut(s) 457, 496, 1219, 1782, 1917
Hsp92I GRCGYC 1 cut(s) 2096
Hsp92II CATG 6 cut(s) 290, 517, 773, 906, 1361, 2103
HspAI GCGC 2 cut(s) 442, 812
Ksp22I TGATCA 1 cut(s) 283
LmnI GCTCC 2 cut(s) 1229, 1326
Lsp1109I GCAGC 7 cut(s) 973, 1564, 1702, 1756, 1986, 1989, 2022
LweI GCATC 6 cut(s) 385, 1255, 1264, 1279, 1381, 1651
MaeI CTAG 8 cut(s) 417, 489, 800, 1434, 1445, 1692, 1764, 1866
MaeII ACGT 5 cut(s) 457, 496, 1219, 1782, 1917
MaeIII GTNAC 6 cut(s) 251, 905, 979, 1651, 1669, 1783
MflI RGATCY 2 cut(s) 302, 478
MhlI GDGCHC 4 cut(s) 82, 1193, 2134, 2158
MlyI GAGTC 4 cut(s) 14, 1010, 1355, 1684
MmeI TCCRAC 2 cut(s) 1904, 2094
Mph1103I ATGCAT 2 cut(s) 6, 1348
MroXI GAANNNNTTC 2 cut(s) 633, 1318
MseI TTAA 4 cut(s) 129, 171, 1398, 2123
MspA1I CMGCKG 1 cut(s) 1999
MspCI CTTAAG 1 cut(s) 170
MspI CCGG 2 cut(s) 896, 1536
MspR9I CCNGG 7 cut(s) 299, 755, 912, 977, 1161, 1537, 1807
Mva1269I GAATGC 1 cut(s) 1154
MvaI CCWGG 6 cut(s) 299, 755, 912, 977, 1161, 1807
MwoI GCNNNNNNNGC 3 cut(s) 206, 992, 1829
NciI CCSGG 1 cut(s) 1537
NcoI CCATGG 2 cut(s) 513, 2099
NlaIII CATG 6 cut(s) 290, 517, 773, 906, 1361, 2103
NlaIV GGNNCC 7 cut(s) 304, 727, 752, 917, 1225, 1353, 2157
NmeAIII GCCGAG 2 cut(s) 226, 1186
NmuCI GTSAC 4 cut(s) 251, 905, 979, 1669
NsiI ATGCAT 2 cut(s) 6, 1348
NspV TTCGAA 1 cut(s) 353
PagI TCATGA 2 cut(s) 286, 1357
PasI CCCWGGG 2 cut(s) 911, 1160
PctI GAATGC 1 cut(s) 1154
PdmI GAANNNNTTC 2 cut(s) 633, 1318
PfeI GAWTC 8 cut(s) 47, 272, 401, 449, 899, 1519, 1725, 1976
PleI GAGTC 4 cut(s) 14, 1009, 1355, 1683
PmaCI CACGTG 1 cut(s) 1220
PmlI CACGTG 1 cut(s) 1220
PpsI GAGTC 4 cut(s) 14, 1009, 1355, 1683
Ppu21I YACGTR 1 cut(s) 1220
PpuMI RGGWCCY 1 cut(s) 751
Psp5II RGGWCCY 1 cut(s) 751
Psp6I CCWGG 6 cut(s) 297, 753, 910, 975, 1159, 1805
PspCI CACGTG 1 cut(s) 1220
PspFI CCCAGC 1 cut(s) 1961
PspGI CCWGG 6 cut(s) 297, 753, 910, 975, 1159, 1805
PspN4I GGNNCC 7 cut(s) 304, 727, 752, 917, 1225, 1353, 2157
PspPI GGNCC 4 cut(s) 99, 656, 726, 751
PspPPI RGGWCCY 1 cut(s) 751
PstNI CAGNNNCTG 1 cut(s) 1979
PsuI RGATCY 2 cut(s) 302, 478
RsaI GTAC 4 cut(s) 892, 1386, 1456, 2204
RsaNI GTAC 4 cut(s) 891, 1385, 1455, 2203
SaqAI TTAA 4 cut(s) 129, 171, 1398, 2123
Sau96I GGNCC 4 cut(s) 99, 656, 726, 751
SchI GAGTC 4 cut(s) 14, 1010, 1355, 1684
ScrFI CCNGG 7 cut(s) 299, 755, 912, 977, 1161, 1537, 1807
SduI GDGCHC 4 cut(s) 82, 1193, 2134, 2158
SfaNI GCATC 6 cut(s) 385, 1255, 1264, 1279, 1381, 1651
SfcI CTRYAG 1 cut(s) 1503
SfuI TTCGAA 1 cut(s) 353
SinI GGWCC 3 cut(s) 99, 726, 751
SmlI CTYRAG 3 cut(s) 170, 600, 996
SmoI CTYRAG 3 cut(s) 170, 600, 996
SpeI ACTAGT 1 cut(s) 1763
SsiI CCGC 6 cut(s) 556, 1442, 1580, 1842, 1889, 1997
SspI AATATT 1 cut(s) 1899
SspMI CTAG 8 cut(s) 417, 489, 800, 1434, 1445, 1692, 1764, 1866
StyD4I CCNGG 7 cut(s) 297, 753, 910, 975, 1159, 1535, 1805
StyI CCWWGG 4 cut(s) 241, 513, 541, 2099
TaaI ACNGT 6 cut(s) 84, 653, 1045, 1064, 1504, 1617
TaiI ACGT 5 cut(s) 460, 499, 1222, 1785, 1920
TaqI TCGA 8 cut(s) 353, 409, 1723, 1777, 1837, 1920, 2045, 2191
TatI WGTACW 3 cut(s) 890, 1384, 2202
TauI GCSGC 4 cut(s) 558, 1444, 1583, 1892
TfiI GAWTC 8 cut(s) 47, 272, 401, 449, 899, 1519, 1725, 1976
Tru1I TTAA 4 cut(s) 129, 171, 1398, 2123
Tru9I TTAA 4 cut(s) 129, 171, 1398, 2123
TscAI CASTG 2 cut(s) 58, 769
TseFI GTSAC 4 cut(s) 251, 905, 979, 1669
TseI GCWGC 7 cut(s) 986, 1577, 1715, 1769, 1999, 2002, 2035
Tsp45I GTSAC 4 cut(s) 251, 905, 979, 1669
TspDTI ATGAA 7 cut(s) 303, 345, 498, 846, 891, 2130, 2163
TspGWI ACGGA 1 cut(s) 91
TspRI CASTG 2 cut(s) 58, 769
Vha464I CTTAAG 1 cut(s) 170
VpaK11BI GGWCC 3 cut(s) 99, 726, 751
XagI CCTNNNNNAGG 2 cut(s) 1034, 2044
XapI RAATTY 8 cut(s) 266, 348, 683, 699, 1050, 1148, 1873, 1933
XmiI GTMKAC 1 cut(s) 1506
XmnI GAANNNNTTC 2 cut(s) 633, 1318
XspI CTAG 8 cut(s) 417, 489, 800, 1434, 1445, 1692, 1764, 1866
Zsp2I ATGCAT 2 cut(s) 6, 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.