MD02G1248100.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0021170
Physical Location & Seq
Forward (+)
29872966 .. 29874339
1374 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1248100.v1.1.491

Sequence Viewer

Length: 1374 bp
ATGGTTTATTCTCAGCAGCACAGAAGCATTAGTATTCTTATGCTTCCATGGCTAGCCCACGGTCACATTTCTCCCTTCCTCGAGCTAGCCAAGAAGCTCACCCACAAGAGAAACAATCTTCACTTCTACATTTGTTCCACGCCTGTGAATCTCACCTCCATCAAGCCCAAACTCTCTGAAAAATACTCCCACTGCATTGAGTTTGTGGAACTCCATCTTCCGCACGATGAGTTGCCTGAACTGCCACCTCACTACCACACCACCAATGGCCTCCCTCCCCATCTCATGTCCACTCTCAAAAAGGCCTTCGACATGTCCAGCAGCAACTTCTCCAACGTCCTCCAAACCCTAAAACCAGATTTGCTCATTTATGATTTTCTCCAACCATGGGCACCCTCTCTAGCTTTGTCGCACAATATTCCGGCCGTTGAGTTTTGTACCATTAACGCTGCCACCATTATTTCAATTTTCGCTAACCATTTCAAGAATTCCAGTCTCAAATTTCCTTTCCCAGGAATCCATCTTCGGGATTACGAGATCAGAATGTTCAAAAATCAGGTGGAGTTTTCATCAAATGGCCTAAAGGACGGAGACCGCATACAGCAGTGCAGTTCTAGTTCTTGCAATATCATTTTGGCGAAGACATCCAGAGAGATTGAAGCGAAATATATCGATTATCTCTCTGATTTAGTCGGGAAGAAGATTGTGCCTGTTGGTCCACTAGTTCAAGACCCACTGGACCAAAAAACCGACGAGGAGTCTCCGATCATCCAGTGGCTGAACAAAAGGGAGAAGTCTTCGGTTGTGTATGTTTCCTTTGGGAGTGAGTACTTTTTGTCCAAGGAGGAAATAGAAGAGATAGCTCATGGGTTAGAGCTCAGCAAAGTGAGTTTCATTTGGGTTATTAGATTTCCCAAGGAAGACAAAACCACTAAAGTTGAAGAAGTATTGCCAAAAGGGTTTGTAGAGAGGATGGGAGAGAGGGGAATGATAGTGGAGGGTTGGGCACCACAAGCAAAGATATTGCAACACCCTAGCGTCGGTGGGTTTGTGAGCCACTGTGGATGGAGCTCTGTGTTGGAGAGCATCAAGTTCGGCGTTCCAATTATAGCCCTGCCAATGCAACTTGACCAACCAGTAAACGCCAAACTGGTAGAGGAGGTCGGCGTGGGTGTGGAGGCTAGGAGAGCAGAAGGTGGTGGTTTGCAACGAGAAGCGATTGCAGAGGCGATCGGAGATGTGGTTGTGAAGAAAATTGGAGAGGGCGTGAGAATGAAGGCACTGGAAGTAAGAGACAACATGAAAGAGATTGAGGATGAAGAGATAAATGACGTGCTGGAGCAGCTGGAGCAGCTGGTGCAACTATGTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

458

Amino Acids

51.51

Weight (kDa)

5.89

Isoelectric Point (pI)

52.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 9 - 242 1.7e-10 Glycosyltransferase, N-terminal domain
UDPGT PF00201 260 - 397 1.4e-21 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 334 - 434 1.1e-07 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021170)

Species Orthologous Gene IDs
malus_domestica MD02G1248100.v1.1 MD02G1248200.v1.1
prunus_persica Prupe.2G085300_v2.0.a1
pyrus_communis pycom02g21250 pycom02g21260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 391, 1006
AciI CCGC 2 cut(s) 221, 595
AcoI YGGCCR 1 cut(s) 423
AcsI RAATTY 2 cut(s) 487, 500
AfaI GTAC 2 cut(s) 439, 830
AfiI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 1040
AflIII ACRYGT 1 cut(s) 312
AgsI TTSAA 6 cut(s) 465, 484, 550, 659, 728, 941
AhdI GACNNNNNGTC 1 cut(s) 757
AhlI ACTAGT 1 cut(s) 721
AjiI CACGTC 1 cut(s) 1333
AjnI CCWGG 1 cut(s) 511
AleI CACNNNNGTG 1 cut(s) 143
AluBI AGCT 8 cut(s) 85, 97, 404, 863, 877, 1071, 1345, 1354
AluI AGCT 8 cut(s) 85, 97, 404, 863, 877, 1071, 1345, 1354
Alw21I GWGCWC 2 cut(s) 879, 1073
Alw26I GTCTC 4 cut(s) 500, 585, 765, 1287
AlwNI CAGNNNCTG 1 cut(s) 778
Ama87I CYCGRG 1 cut(s) 80
AoxI GGCC 4 cut(s) 268, 303, 423, 577
ApeKI GCWGC 5 cut(s) 16, 321, 449, 1342, 1351
ApoI RAATTY 2 cut(s) 487, 500
AspS9I GGNCC 2 cut(s) 716, 739
AsuHPI GGTGA 2 cut(s) 91, 145
AsuNHI GCTAGC 2 cut(s) 52, 85
AvaI CYCGRG 1 cut(s) 80
AvaII GGWCC 2 cut(s) 716, 739
BaeGI GKGCMC 2 cut(s) 394, 1009
BanI GGYRCC 2 cut(s) 391, 1006
BanII GRGCYC 2 cut(s) 879, 1073
BbsI GAAGAC 3 cut(s) 647, 789, 927
Bbv12I GWGCWC 2 cut(s) 879, 1073
BbvI GCAGC 5 cut(s) 28, 333, 436, 1354, 1363
BccI CCATC 6 cut(s) 167, 222, 288, 528, 967, 1059
BceAI ACGGC 1 cut(s) 410
BcgI CGANNNNNNTGC 2 cut(s) 1075, 1109
BciT130I CCWGG 1 cut(s) 513
BcoDI GTCTC 4 cut(s) 500, 585, 765, 1287
BcuI ACTAGT 1 cut(s) 721
BfaI CTAG 7 cut(s) 53, 86, 401, 615, 722, 1035, 1182
BisI GCNGC 5 cut(s) 17, 322, 450, 1343, 1352
BlpI GCTNAGC 1 cut(s) 878
BlsI GCNGC 5 cut(s) 18, 323, 451, 1344, 1353
BmcAI AGTACT 1 cut(s) 830
Bme1390I CCNGG 1 cut(s) 513
Bme18I GGWCC 2 cut(s) 716, 739
BmeRI GACNNNNNGTC 1 cut(s) 757
BmeT110I CYCGRG 1 cut(s) 80
BmgBI CACGTC 1 cut(s) 1333
BmgT120I GGNCC 2 cut(s) 716, 739
BmiI GGNNCC 2 cut(s) 393, 1008
BmrFI CCNGG 1 cut(s) 513
BmsI GCATC 1 cut(s) 1095
BmtI GCTAGC 2 cut(s) 56, 89
BpiI GAAGAC 3 cut(s) 647, 789, 927
BpmI CTGGAG 2 cut(s) 1358, 1367
Bpu1102I GCTNAGC 1 cut(s) 878
Bsa29I ATCGAT 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 585
BsaJI CCNNGG 6 cut(s) 47, 58, 386, 511, 840, 915
BsaXI ACNNNNNCTCC 4 cut(s) 1227, 1251, 1257, 1281
Bsc4I CCNNNNNNNGG 4 cut(s) 388, 512, 526, 1040
Bse1I ACTGG 6 cut(s) 492, 741, 772, 1136, 1155, 1287
BseBI CCWGG 1 cut(s) 513
BseCI ATCGAT 1 cut(s) 672
BseDI CCNNGG 6 cut(s) 47, 58, 386, 511, 840, 915
BseGI GGATG 5 cut(s) 644, 768, 978, 1070, 1321
BseLI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 1040
BseMII CTCAG 2 cut(s) 26, 892
BseNI ACTGG 6 cut(s) 492, 741, 772, 1136, 1155, 1287
BseRI GAGGAG 2 cut(s) 770, 1172
BseSI GKGCMC 2 cut(s) 394, 1009
BseX3I CGGCCG 1 cut(s) 423
BseXI GCAGC 5 cut(s) 28, 333, 436, 1354, 1363
BsgI GTGCAG 1 cut(s) 628
Bsh1285I CGRYCG 2 cut(s) 426, 1233
BshFI GGCC 4 cut(s) 270, 305, 425, 579
BshNI GGYRCC 2 cut(s) 391, 1006
BshVI ATCGAT 1 cut(s) 672
BsiEI CGRYCG 2 cut(s) 426, 1233
BsiHKAI GWGCWC 2 cut(s) 879, 1073
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 1 cut(s) 422
BslI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 1040
BsmAI GTCTC 4 cut(s) 500, 585, 765, 1287
BsnI GGCC 4 cut(s) 270, 305, 425, 579
Bso31I GGTCTC 1 cut(s) 585
BsoBI CYCGRG 1 cut(s) 80
Bsp1286I GDGCHC 4 cut(s) 394, 879, 1009, 1073
Bsp143I GATC 3 cut(s) 537, 765, 1230
Bsp1720I GCTNAGC 1 cut(s) 878
Bsp19I CCATGG 2 cut(s) 47, 386
BspACI CCGC 2 cut(s) 221, 595
BspANI GGCC 4 cut(s) 270, 305, 425, 579
BspCNI CTCAG 2 cut(s) 25, 891
BspDI ATCGAT 1 cut(s) 672
BspLI GGNNCC 2 cut(s) 393, 1008
BspOI GCTAGC 2 cut(s) 56, 89
BspT107I GGYRCC 2 cut(s) 391, 1006
BspTNI GGTCTC 1 cut(s) 585
BsrI ACTGG 6 cut(s) 492, 741, 772, 1136, 1155, 1287
BssECI CCNNGG 6 cut(s) 47, 58, 386, 511, 840, 915
BssMI GATC 3 cut(s) 537, 765, 1230
BssT1I CCWWGG 4 cut(s) 47, 386, 840, 915
Bst2UI CCWGG 1 cut(s) 513
Bst4CI ACNGT 2 cut(s) 62, 1061
Bst6I CTCTTC 2 cut(s) 849, 1314
BstAPI GCANNNNNTGC 1 cut(s) 1357
BstC8I GCNNGC 2 cut(s) 54, 87
BstDEI CTNAG 2 cut(s) 12, 878
BstDSI CCRYGG 3 cut(s) 47, 58, 386
BstENI CCTNNNNNAGG 1 cut(s) 510
BstF5I GGATG 5 cut(s) 644, 768, 978, 1070, 1321
BstKTI GATC 3 cut(s) 540, 768, 1233
BstMAI GTCTC 4 cut(s) 500, 585, 765, 1287
BstMBI GATC 3 cut(s) 537, 765, 1230
BstMCI CGRYCG 2 cut(s) 426, 1233
BstMWI GCNNNNNNNGC 8 cut(s) 49, 241, 1013, 1187, 1342, 1348, 1351, 1357
BstNI CCWGG 1 cut(s) 513
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 1 cut(s) 511
BstSLI GKGCMC 2 cut(s) 394, 1009
BstV1I GCAGC 5 cut(s) 28, 333, 436, 1354, 1363
BstV2I GAAGAC 3 cut(s) 647, 789, 927
BstZI CGGCCG 1 cut(s) 423
Bsu15I ATCGAT 1 cut(s) 672
BsuRI GGCC 4 cut(s) 270, 305, 425, 579
BsuTUI ATCGAT 1 cut(s) 672
BtgI CCRYGG 3 cut(s) 47, 58, 386
BtrI CACGTC 1 cut(s) 1333
BtsCI GGATG 5 cut(s) 644, 768, 978, 1070, 1321
BtsI GCAGTG 2 cut(s) 190, 611
BtsIMutI CAGTG 6 cut(s) 190, 611, 734, 779, 1057, 1280
Cac8I GCNNGC 2 cut(s) 54, 87
CaiI CAGNNNCTG 1 cut(s) 778
Cfr13I GGNCC 2 cut(s) 716, 739
ClaI ATCGAT 1 cut(s) 672
CseI GACGC 1 cut(s) 1027
Csp6I GTAC 2 cut(s) 438, 829
CspCI CAANNNNNGTGG 2 cut(s) 919, 954
CviAII CATG 6 cut(s) 48, 286, 313, 387, 866, 1300
CviQI GTAC 2 cut(s) 438, 829
DdeI CTNAG 2 cut(s) 12, 878
DpnI GATC 3 cut(s) 539, 767, 1232
DpnII GATC 3 cut(s) 537, 765, 1230
DriI GACNNNNNGTC 1 cut(s) 757
EaeI YGGCCR 1 cut(s) 423
EagI CGGCCG 1 cut(s) 423
Eam1104I CTCTTC 2 cut(s) 849, 1314
Eam1105I GACNNNNNGTC 1 cut(s) 757
EarI CTCTTC 2 cut(s) 849, 1314
Ecl136II GAGCTC 2 cut(s) 877, 1071
EclXI CGGCCG 1 cut(s) 423
Eco130I CCWWGG 4 cut(s) 47, 386, 840, 915
Eco147I AGGCCT 1 cut(s) 305
Eco24I GRGCYC 2 cut(s) 879, 1073
Eco31I GGTCTC 1 cut(s) 585
Eco47I GGWCC 2 cut(s) 716, 739
Eco52I CGGCCG 1 cut(s) 423
Eco53kI GAGCTC 2 cut(s) 877, 1071
Eco88I CYCGRG 1 cut(s) 80
EcoICRI GAGCTC 2 cut(s) 877, 1071
EcoNI CCTNNNNNAGG 1 cut(s) 510
EcoRI GAATTC 1 cut(s) 487
EcoRII CCWGG 1 cut(s) 511
EcoT14I CCWWGG 4 cut(s) 47, 386, 840, 915
EcoT38I GRGCYC 2 cut(s) 879, 1073
ErhI CCWWGG 4 cut(s) 47, 386, 840, 915
FaeI CATG 6 cut(s) 51, 289, 316, 390, 869, 1303
FatI CATG 6 cut(s) 47, 285, 312, 386, 865, 1299
Fnu4HI GCNGC 5 cut(s) 17, 322, 450, 1343, 1352
FokI GGATG 5 cut(s) 631, 755, 985, 1077, 1328
FriOI GRGCYC 2 cut(s) 879, 1073
Fsp4HI GCNGC 5 cut(s) 17, 322, 450, 1343, 1352
FspBI CTAG 7 cut(s) 53, 86, 401, 615, 722, 1035, 1182
GluI GCNGC 5 cut(s) 17, 322, 450, 1343, 1352
GsuI CTGGAG 2 cut(s) 1358, 1367
HaeIII GGCC 4 cut(s) 270, 305, 425, 579
HapII CCGG 1 cut(s) 422
HgaI GACGC 1 cut(s) 1027
Hin1II CATG 6 cut(s) 51, 289, 316, 390, 869, 1303
HinfI GANTC 3 cut(s) 148, 516, 758
HpaII CCGG 1 cut(s) 422
HphI GGTGA 2 cut(s) 91, 145
Hpy166II GTNNAC 3 cut(s) 291, 719, 1141
Hpy188I TCNGA 5 cut(s) 178, 542, 685, 765, 1235
Hpy188III TCNNGA 5 cut(s) 484, 527, 648, 694, 728
Hpy8I GTNNAC 3 cut(s) 291, 719, 1141
Hpy99I CGWCG 2 cut(s) 755, 1043
HpyAV CCTTC 4 cut(s) 85, 316, 1187, 1270
HpyCH4III ACNGT 2 cut(s) 62, 1061
HpyCH4IV ACGT 2 cut(s) 336, 1332
HpyCH4V TGCA 9 cut(s) 195, 609, 624, 1027, 1123, 1207, 1223, 1360, 1370
HpyF10VI GCNNNNNNNGC 8 cut(s) 49, 241, 1013, 1187, 1342, 1348, 1351, 1357
HpyF3I CTNAG 2 cut(s) 12, 878
HpySE526I ACGT 2 cut(s) 336, 1332
Hsp92II CATG 6 cut(s) 51, 289, 316, 390, 869, 1303
Kzo9I GATC 3 cut(s) 537, 765, 1230
LmnI GCTCC 3 cut(s) 1068, 1339, 1348
Lsp1109I GCAGC 5 cut(s) 28, 333, 436, 1354, 1363
LweI GCATC 1 cut(s) 1095
MaeI CTAG 7 cut(s) 53, 86, 401, 615, 722, 1035, 1182
MaeII ACGT 2 cut(s) 336, 1332
MaeIII GTNAC 1 cut(s) 62
MalI GATC 3 cut(s) 539, 767, 1232
MboI GATC 3 cut(s) 537, 765, 1230
MhlI GDGCHC 4 cut(s) 394, 879, 1009, 1073
MluCI AATT 5 cut(s) 465, 487, 500, 1104, 1254
MlyI GAGTC 1 cut(s) 767
MmeI TCCRAC 3 cut(s) 357, 406, 1059
MseI TTAA 1 cut(s) 444
MslI CAYNNNNRTG 1 cut(s) 143
MspA1I CMGCKG 2 cut(s) 1345, 1354
MspI CCGG 1 cut(s) 422
MspR9I CCNGG 1 cut(s) 513
MvaI CCWGG 1 cut(s) 513
MwoI GCNNNNNNNGC 8 cut(s) 49, 241, 1013, 1187, 1342, 1348, 1351, 1357
NcoI CCATGG 2 cut(s) 47, 386
NdeII GATC 3 cut(s) 537, 765, 1230
NheI GCTAGC 2 cut(s) 52, 85
NlaIII CATG 6 cut(s) 51, 289, 316, 390, 869, 1303
NlaIV GGNNCC 2 cut(s) 393, 1008
NmuCI GTSAC 1 cut(s) 62
NspI RCATGY 1 cut(s) 316
OliI CACNNNNGTG 1 cut(s) 143
PaeR7I CTCGAG 1 cut(s) 80
PceI AGGCCT 1 cut(s) 305
PciI ACATGT 1 cut(s) 312
PfeI GAWTC 2 cut(s) 148, 516
PkrI GCNGC 5 cut(s) 18, 323, 451, 1344, 1353
Ple19I CGATCG 1 cut(s) 1233
PleI GAGTC 1 cut(s) 766
PpsI GAGTC 1 cut(s) 766
PscI ACATGT 1 cut(s) 312
Psp124BI GAGCTC 2 cut(s) 879, 1073
Psp6I CCWGG 1 cut(s) 511
PspGI CCWGG 1 cut(s) 511
PspN4I GGNNCC 2 cut(s) 393, 1008
PspPI GGNCC 2 cut(s) 716, 739
PspXI VCTCGAGB 1 cut(s) 80
PstNI CAGNNNCTG 1 cut(s) 778
PvuI CGATCG 1 cut(s) 1233
PvuII CAGCTG 2 cut(s) 1345, 1354
RsaI GTAC 2 cut(s) 439, 830
RsaNI GTAC 2 cut(s) 438, 829
RseI CAYNNNNRTG 1 cut(s) 143
SacI GAGCTC 2 cut(s) 879, 1073
SaqAI TTAA 1 cut(s) 444
SatI GCNGC 5 cut(s) 17, 322, 450, 1343, 1352
Sau3AI GATC 3 cut(s) 537, 765, 1230
Sau96I GGNCC 2 cut(s) 716, 739
ScaI AGTACT 1 cut(s) 830
SchI GAGTC 1 cut(s) 767
ScrFI CCNGG 1 cut(s) 513
SduI GDGCHC 4 cut(s) 394, 879, 1009, 1073
SfaNI GCATC 1 cut(s) 1095
Sfr274I CTCGAG 1 cut(s) 80
SinI GGWCC 2 cut(s) 716, 739
SlaI CTCGAG 1 cut(s) 80
SmiMI CAYNNNNRTG 1 cut(s) 143
SmlI CTYRAG 1 cut(s) 80
SmoI CTYRAG 1 cut(s) 80
SpeI ACTAGT 1 cut(s) 721
Sse9I AATT 5 cut(s) 465, 487, 500, 1104, 1254
SseBI AGGCCT 1 cut(s) 305
SsiI CCGC 2 cut(s) 221, 595
SspI AATATT 1 cut(s) 418
SspMI CTAG 7 cut(s) 53, 86, 401, 615, 722, 1035, 1182
SstI GAGCTC 2 cut(s) 879, 1073
StuI AGGCCT 1 cut(s) 305
StyD4I CCNGG 1 cut(s) 511
StyI CCWWGG 4 cut(s) 47, 386, 840, 915
TaaI ACNGT 2 cut(s) 62, 1061
TaiI ACGT 2 cut(s) 339, 1335
TaqI TCGA 3 cut(s) 81, 309, 672
TasI AATT 5 cut(s) 465, 487, 500, 1104, 1254
TatI WGTACW 1 cut(s) 828
TfiI GAWTC 2 cut(s) 148, 516
Tru1I TTAA 1 cut(s) 444
Tru9I TTAA 1 cut(s) 444
TscAI CASTG 6 cut(s) 197, 611, 741, 779, 1064, 1287
TseFI GTSAC 1 cut(s) 62
TseI GCWGC 5 cut(s) 16, 321, 449, 1342, 1351
Tsp45I GTSAC 1 cut(s) 62
TspDTI ATGAA 5 cut(s) 558, 883, 1289, 1316, 1332
TspGWI ACGGA 1 cut(s) 603
TspRI CASTG 6 cut(s) 197, 611, 741, 779, 1064, 1287
VpaK11BI GGWCC 2 cut(s) 716, 739
XagI CCTNNNNNAGG 1 cut(s) 510
XapI RAATTY 2 cut(s) 487, 500
XceI RCATGY 1 cut(s) 316
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
XhoI CTCGAG 1 cut(s) 80
XspI CTAG 7 cut(s) 53, 86, 401, 615, 722, 1035, 1182
ZrmI AGTACT 1 cut(s) 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.