Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0021170

Physical Location & Seq

Genomic Coordinates Reverse (-)

13512160 .. 13513750

Gene Structure 1591 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G085300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGGTCAGAGTTCTTATGCTTCCATGGCTAGCTCACGGCCACATATCTCCCTTCTTAGAGCTAGCCAAGAAGCTCACCAATAAGAACAAGGATTTTTACATATTTATTTGTTCCACACCCGTAAATCTCAGCTCCATCAAACCAAAACTCTCTGAAGAATACTCTCATTGCATTGAATTTGTGGAACTACATCTTCCACATGATGACTTGCCACCTCATTACCACACTACCAATGGCCTCCCTCCCCATCTCATGGCCACTCTCAAAAAGACCTTTGACATGGCCAGCCCCAACTTCTCCAACATCCTCAAAACCCTAAAGCCGGATTTGCTCATCTACGATTTTCTTCAACCATGGGCACCCTCTCTTGCTTTGTTGCAAAATATTCCAGCCATAGAGTTCAGCATCATGAACGCTGCGCTCTTGAGTTCAGTTTGTGCTCACGATCTCAACAATCCTACTGCCAAATTTCCTTTGCATCTTCGGGATTACGATATTCGAAAGTTCCACAATCAGTGTGAGTTTTCATCAAATGGCATCAAGGATGGAGACCGCATACAGCAATGCTGTGCTCGATCTTGTAAGATCATTTTGGTAAAGACATCTAGAGAGATTGAAGCAAAATATGTTGATTATCTCTCTGATTTAGTGAAGAAGAAGATTGTTCCGGTTGGTCCTCTTGTTCAAGACCCCATGGGTCAAACACTTGATGAGGAAACATGGATCATGAAATGGCTGAACAAAAGAGAGAGGTCTTCAGTTGTGTATGTTTCCTTTGGCAGTGAGTACTTTTTGTCCAAGGAGGAAATAGAAGACATAGCTCATGGGTTAGAGCTTAGCAAAGTGAGCTTCATTTGGGTTATAAGATTTCCTAAGGAAGAGAAAGGTACTAGGGTTGAAGAGGTGTTACCAGAAGGGTTTTCAGAGAGGGTGGGAGAGAAGGGAATGATAGTGGAGGGCTGGGCCCCGCAGTCAAAAATATTGGAGCATTATAGTGTCGGTGGGTTTGTAAGTCACTGTGGATGGAGCTCAGTGTTGGAGAGCATCAAGTTTGGCGTTCCAATTATAGCCTTGCCTATGCTTTATGACCAGCCAATCAACGCTAGACTAGTGGAGGAGGTGGGTGTTGGAGTGGAGGTTAAGAGAACAGCAGAAGGCAGTTTCCAAAGTGAAGAGGTAGCAAAGGTGATTAGAGATGTGGTGGTGGATAAAATTGGAGAGGGTGTGAGAAAAAAAGCATTGGAATTAAGAGACAACATGAAAAATAAAGAGGATGCAGAGAGAGATGGGGTGGTGGAGGAGTTGATGCAACTTTGCACCGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

442

Amino Acids

49.99

Weight (kDa)

5.92

Isoelectric Point (pI)

49.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0021170)

Species	Orthologous Gene IDs
malus_domestica	MD02G1248100.v1.1 MD02G1248200.v1.1
prunus_persica	Prupe.2G085300_v2.0.a1
pyrus_communis	pycom02g21250 pycom02g21260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	863
AccB1I	GGYRCC	1 cut(s)	358
AccB7I	CCANNNNNTGG	1 cut(s)	253
AciI	CCGC	2 cut(s)	553, 968
AclWI	GGATC	1 cut(s)	731
AcoI	YGGCCR	3 cut(s)	37, 255, 282
AcsI	RAATTY	2 cut(s)	176, 467
AcuI	CTGAAG	2 cut(s)	174, 741
AfaI	GTAC	2 cut(s)	788, 889
AfiI	CCNNNNNNNGG	2 cut(s)	253, 322
AgsI	TTSAA	5 cut(s)	176, 350, 617, 686, 899
AhlI	ACTAGT	1 cut(s)	1108
AluBI	AGCT	8 cut(s)	32, 61, 73, 132, 821, 835, 849, 1029
AluI	AGCT	8 cut(s)	32, 61, 73, 132, 821, 835, 849, 1029
Alw21I	GWGCWC	3 cut(s)	442, 574, 1031
Alw26I	GTCTC	2 cut(s)	543, 1245
AlwI	GGATC	1 cut(s)	731
AoxI	GGCC	5 cut(s)	37, 235, 255, 282, 963
ApaI	GGGCCC	1 cut(s)	967
ApeKI	GCWGC	1 cut(s)	416
ApoI	RAATTY	2 cut(s)	176, 467
AspLEI	GCGC	1 cut(s)	421
AspS9I	GGNCC	3 cut(s)	674, 963, 964
AsuHPI	GGTGA	2 cut(s)	67, 1198
AsuII	TTCGAA	1 cut(s)	499
AsuNHI	GCTAGC	2 cut(s)	28, 61
AvaII	GGWCC	1 cut(s)	674
AxyI	CCTNAGG	1 cut(s)	873
BaeGI	GKGCMC	2 cut(s)	361, 967
BaeI	ACNNNNGTAYC	2 cut(s)	879, 912
BalI	TGGCCA	2 cut(s)	257, 284
BanI	GGYRCC	1 cut(s)	358
BanII	GRGCYC	2 cut(s)	967, 1031
BarI	GAAGNNNNNNTAC	2 cut(s)	891, 923
BbsI	GAAGAC	2 cut(s)	747, 819
Bbv12I	GWGCWC	3 cut(s)	442, 574, 1031
BbvI	GCAGC	1 cut(s)	403
BccI	CCATC	5 cut(s)	143, 255, 539, 1017, 1280
BceAI	ACGGC	1 cut(s)	52
BcoDI	GTCTC	2 cut(s)	543, 1245
BcuI	ACTAGT	1 cut(s)	1108
BfaI	CTAG	6 cut(s)	29, 62, 606, 891, 1104, 1109
BisI	GCNGC	1 cut(s)	417
BlpI	GCTNAGC	1 cut(s)	836
BlsI	GCNGC	1 cut(s)	418
BmcAI	AGTACT	1 cut(s)	788
Bme18I	GGWCC	1 cut(s)	674
BmgT120I	GGNCC	3 cut(s)	674, 963, 964
BmiI	GGNNCC	3 cut(s)	360, 965, 966
BmsI	GCATC	6 cut(s)	414, 487, 546, 1053, 1264, 1296
BmtI	GCTAGC	2 cut(s)	32, 65
BpiI	GAAGAC	2 cut(s)	747, 819
Bpu1102I	GCTNAGC	1 cut(s)	836
Bpu14I	TTCGAA	1 cut(s)	499
BpuEI	CTTGAG	1 cut(s)	445
BsaI	GGTCTC	1 cut(s)	543
BsaJI	CCNNGG	4 cut(s)	23, 353, 693, 798
BsaWI	WCCGGW	2 cut(s)	667, 1319
BsaXI	ACNNNNNCTCC	4 cut(s)	1122, 1152, 1209, 1239
Bsc4I	CCNNNNNNNGG	2 cut(s)	253, 322
Bse21I	CCTNAGG	1 cut(s)	873
Bse3DI	GCAATG	2 cut(s)	166, 569
BseDI	CCNNGG	4 cut(s)	23, 353, 693, 798
BseGI	GGATG	4 cut(s)	303, 550, 1028, 1279
BseLI	CCNNNNNNNGG	2 cut(s)	253, 322
BseMI	GCAATG	2 cut(s)	166, 569
BseMII	CTCAG	2 cut(s)	142, 1044
BseRI	GAGGAG	2 cut(s)	1130, 1313
BseSI	GKGCMC	2 cut(s)	361, 967
BseXI	GCAGC	1 cut(s)	403
BseYI	CCCAGC	1 cut(s)	960
BshFI	GGCC	5 cut(s)	39, 237, 257, 284, 965
BshNI	GGYRCC	1 cut(s)	358
BsiHKAI	GWGCWC	3 cut(s)	442, 574, 1031
BsiSI	CCGG	3 cut(s)	323, 668, 1320
BslI	CCNNNNNNNGG	2 cut(s)	253, 322
BsmAI	GTCTC	2 cut(s)	543, 1245
BsnI	GGCC	5 cut(s)	39, 237, 257, 284, 965
Bso31I	GGTCTC	1 cut(s)	543
Bsp119I	TTCGAA	1 cut(s)	499
Bsp120I	GGGCCC	1 cut(s)	963
Bsp1286I	GDGCHC	5 cut(s)	361, 442, 574, 967, 1031
Bsp143I	GATC	4 cut(s)	445, 575, 585, 723
Bsp1720I	GCTNAGC	1 cut(s)	836
Bsp19I	CCATGG	3 cut(s)	23, 353, 693
BspACI	CCGC	2 cut(s)	553, 968
BspANI	GGCC	5 cut(s)	39, 237, 257, 284, 965
BspCNI	CTCAG	2 cut(s)	141, 1043
BspHI	TCATGA	2 cut(s)	408, 726
BspLI	GGNNCC	3 cut(s)	360, 965, 966
BspOI	GCTAGC	2 cut(s)	32, 65
BspPI	GGATC	1 cut(s)	731
BspT104I	TTCGAA	1 cut(s)	499
BspT107I	GGYRCC	1 cut(s)	358
BspTNI	GGTCTC	1 cut(s)	543
BsrDI	GCAATG	2 cut(s)	166, 569
BssECI	CCNNGG	4 cut(s)	23, 353, 693, 798
BssMI	GATC	4 cut(s)	445, 575, 585, 723
BssT1I	CCWWGG	4 cut(s)	23, 353, 693, 798
Bst4CI	ACNGT	1 cut(s)	1019
Bst6I	CTCTTC	3 cut(s)	873, 894, 1167
BstBI	TTCGAA	1 cut(s)	499
BstC8I	GCNNGC	3 cut(s)	30, 63, 286
BstDEI	CTNAG	5 cut(s)	55, 128, 836, 873, 1030
BstDSI	CCRYGG	3 cut(s)	23, 353, 693
BstF5I	GGATG	4 cut(s)	303, 550, 1028, 1279
BstHHI	GCGC	1 cut(s)	421
BstKTI	GATC	4 cut(s)	448, 578, 588, 726
BstMAI	GTCTC	2 cut(s)	543, 1245
BstMBI	GATC	4 cut(s)	445, 575, 585, 723
BstMWI	GCNNNNNNNGC	3 cut(s)	25, 328, 846
BstSLI	GKGCMC	2 cut(s)	361, 967
BstV1I	GCAGC	1 cut(s)	403
BstV2I	GAAGAC	2 cut(s)	747, 819
Bsu36I	CCTNAGG	1 cut(s)	873
BsuRI	GGCC	5 cut(s)	39, 237, 257, 284, 965
BtgI	CCRYGG	3 cut(s)	23, 353, 693
BtsCI	GGATG	4 cut(s)	303, 550, 1028, 1279
BtsI	GCAGTG	1 cut(s)	787
BtsIMutI	CAGTG	4 cut(s)	521, 787, 1015, 1038
Cac8I	GCNNGC	3 cut(s)	30, 63, 286
CciI	TCATGA	2 cut(s)	408, 726
CfoI	GCGC	1 cut(s)	421
Cfr13I	GGNCC	3 cut(s)	674, 963, 964
Csp6I	GTAC	2 cut(s)	787, 888
CviQI	GTAC	2 cut(s)	787, 888
DdeI	CTNAG	5 cut(s)	55, 128, 836, 873, 1030
DpnI	GATC	4 cut(s)	447, 577, 587, 725
DpnII	GATC	4 cut(s)	445, 575, 585, 723
EaeI	YGGCCR	3 cut(s)	37, 255, 282
Eam1104I	CTCTTC	3 cut(s)	873, 894, 1167
EarI	CTCTTC	3 cut(s)	873, 894, 1167
Ecl136II	GAGCTC	1 cut(s)	1029
Eco130I	CCWWGG	4 cut(s)	23, 353, 693, 798
Eco24I	GRGCYC	2 cut(s)	967, 1031
Eco31I	GGTCTC	1 cut(s)	543
Eco47I	GGWCC	1 cut(s)	674
Eco53kI	GAGCTC	1 cut(s)	1029
Eco57I	CTGAAG	2 cut(s)	174, 741
Eco81I	CCTNAGG	1 cut(s)	873
EcoICRI	GAGCTC	1 cut(s)	1029
EcoO109I	RGGNCCY	1 cut(s)	964
EcoT14I	CCWWGG	4 cut(s)	23, 353, 693, 798
EcoT38I	GRGCYC	2 cut(s)	967, 1031
ErhI	CCWWGG	4 cut(s)	23, 353, 693, 798
FauI	CCCGC	1 cut(s)	975
Fnu4HI	GCNGC	1 cut(s)	417
FokI	GGATG	4 cut(s)	290, 557, 1035, 1286
FriOI	GRGCYC	2 cut(s)	967, 1031
Fsp4HI	GCNGC	1 cut(s)	417
FspBI	CTAG	6 cut(s)	29, 62, 606, 891, 1104, 1109
GlaI	GCGC	1 cut(s)	420
GluI	GCNGC	1 cut(s)	417
GsaI	CCCAGC	1 cut(s)	964
HaeIII	GGCC	5 cut(s)	39, 237, 257, 284, 965
HapII	CCGG	3 cut(s)	323, 668, 1320
HhaI	GCGC	1 cut(s)	421
Hin6I	GCGC	1 cut(s)	419
HinP1I	GCGC	1 cut(s)	419
HpaII	CCGG	3 cut(s)	323, 668, 1320
HphI	GGTGA	2 cut(s)	67, 1198
Hpy188I	TCNGA	4 cut(s)	8, 154, 643, 925
Hpy188III	TCNNGA	7 cut(s)	409, 424, 443, 485, 606, 686, 727
HpyAV	CCTTC	4 cut(s)	61, 908, 934, 1148
HpyCH4III	ACNGT	1 cut(s)	1019
HpyCH4V	TGCA	6 cut(s)	171, 379, 478, 1277, 1309, 1317
HpyF10VI	GCNNNNNNNGC	3 cut(s)	25, 328, 846
HpyF3I	CTNAG	5 cut(s)	55, 128, 836, 873, 1030
HspAI	GCGC	1 cut(s)	419
Kzo9I	GATC	4 cut(s)	445, 575, 585, 723
LmnI	GCTCC	3 cut(s)	137, 985, 1026
LpnPI	CCDG	7 cut(s)	298, 336, 402, 681, 924, 946, 1103
Lsp1109I	GCAGC	1 cut(s)	403
LweI	GCATC	6 cut(s)	414, 487, 546, 1053, 1264, 1296
MaeI	CTAG	6 cut(s)	29, 62, 606, 891, 1104, 1109
MaeIII	GTNAC	2 cut(s)	906, 1013
MalI	GATC	4 cut(s)	447, 577, 587, 725
MboI	GATC	4 cut(s)	445, 575, 585, 723
MhlI	GDGCHC	5 cut(s)	361, 442, 574, 967, 1031
MlsI	TGGCCA	2 cut(s)	257, 284
MluCI	AATT	5 cut(s)	176, 467, 1062, 1212, 1244
MluNI	TGGCCA	2 cut(s)	257, 284
MmeI	TCCRAC	3 cut(s)	324, 1017, 1108
Mox20I	TGGCCA	2 cut(s)	257, 284
MscI	TGGCCA	2 cut(s)	257, 284
MseI	TTAA	2 cut(s)	1140, 1247
MslI	CAYNNNNRTG	1 cut(s)	993
Msp20I	TGGCCA	2 cut(s)	257, 284
MspI	CCGG	3 cut(s)	323, 668, 1320
MwoI	GCNNNNNNNGC	3 cut(s)	25, 328, 846
NcoI	CCATGG	3 cut(s)	23, 353, 693
NdeII	GATC	4 cut(s)	445, 575, 585, 723
NheI	GCTAGC	2 cut(s)	28, 61
NlaIV	GGNNCC	3 cut(s)	360, 965, 966
NmuCI	GTSAC	1 cut(s)	1013
NspV	TTCGAA	1 cut(s)	499
PagI	TCATGA	2 cut(s)	408, 726
PflMI	CCANNNNNTGG	1 cut(s)	253
PkrI	GCNGC	1 cut(s)	418
PsiI	TTATAA	1 cut(s)	863
Psp124BI	GAGCTC	1 cut(s)	1031
PspFI	CCCAGC	1 cut(s)	960
PspN4I	GGNNCC	3 cut(s)	360, 965, 966
PspOMI	GGGCCC	1 cut(s)	963
PspPI	GGNCC	3 cut(s)	674, 963, 964
RsaI	GTAC	2 cut(s)	788, 889
RsaNI	GTAC	2 cut(s)	787, 888
RseI	CAYNNNNRTG	1 cut(s)	993
SacI	GAGCTC	1 cut(s)	1031
SaqAI	TTAA	2 cut(s)	1140, 1247
SatI	GCNGC	1 cut(s)	417
Sau3AI	GATC	4 cut(s)	445, 575, 585, 723
Sau96I	GGNCC	3 cut(s)	674, 963, 964
ScaI	AGTACT	1 cut(s)	788
SduI	GDGCHC	5 cut(s)	361, 442, 574, 967, 1031
SfaNI	GCATC	6 cut(s)	414, 487, 546, 1053, 1264, 1296
SfuI	TTCGAA	1 cut(s)	499
SinI	GGWCC	1 cut(s)	674
SmiMI	CAYNNNNRTG	1 cut(s)	993
SmlI	CTYRAG	1 cut(s)	424
SmoI	CTYRAG	1 cut(s)	424
SpeI	ACTAGT	1 cut(s)	1108
Sse9I	AATT	5 cut(s)	176, 467, 1062, 1212, 1244
SsiI	CCGC	2 cut(s)	553, 968
SspI	AATATT	2 cut(s)	385, 981
SspMI	CTAG	6 cut(s)	29, 62, 606, 891, 1104, 1109
SstI	GAGCTC	1 cut(s)	1031
StyI	CCWWGG	4 cut(s)	23, 353, 693, 798
TaaI	ACNGT	1 cut(s)	1019
TaqI	TCGA	2 cut(s)	499, 574
TasI	AATT	5 cut(s)	176, 467, 1062, 1212, 1244
TatI	WGTACW	1 cut(s)	786
Tru1I	TTAA	2 cut(s)	1140, 1247
Tru9I	TTAA	2 cut(s)	1140, 1247
TscAI	CASTG	4 cut(s)	521, 787, 1022, 1038
TseFI	GTSAC	1 cut(s)	1013
TseI	GCWGC	1 cut(s)	416
Tsp45I	GTSAC	1 cut(s)	1013
TspDTI	ATGAA	5 cut(s)	425, 516, 743, 841, 1274
TspRI	CASTG	4 cut(s)	521, 787, 1022, 1038
Van91I	CCANNNNNTGG	1 cut(s)	253
VpaK11BI	GGWCC	1 cut(s)	674
XapI	RAATTY	2 cut(s)	176, 467
XbaI	TCTAGA	1 cut(s)	605
XcmI	CCANNNNNNNNNTGG	1 cut(s)	230
XspI	CTAG	6 cut(s)	29, 62, 606, 891, 1104, 1109
ZrmI	AGTACT	1 cut(s)	788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.