pycom02g21260

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0021170
Physical Location & Seq
Forward (+)
19437658 .. 19439021
1364 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g21260.1

Sequence Viewer

Length: 1218 bp
ATGGTTTATTCTCAGCAGCACAGAAGCATTAGTATTCTTATGCTTCCATGGCTAGCCCACGGCCACATTTCTCCCTTCCTCGAGCTAGCCAAGAAGCTCACCCATAAGAGAAACAATCTCCACTTCTACATTTGTTCCACCCCTGTGAATCTCACCTCCATCAAACCCAAACTCTCTGAAAAATACTCTCACTGCATTGAGTTTGTGGAGCTCCATCTTTCGCACGATGAGTTTCCTGAACTTCCTCCTCACTACCACACCACCAATGGCCTCCCACCCCATCTCATGTCCACTCTCAAAAAGGCCTTCGACATGTCCAGCAGCAACTTCTCCAACATCCTCCAAACCCTAAAACCAGATTTGCTCATTTACGATTTTCTCCAACCATGGGCACCCTCTCTAGCTTTGTCGCACAATATTCCGTCCGTCGAGTTCTGTACCATGAACGCCGCCACCATTATTTCAACTTTCGTCATCGATTTCAATAATTCCGGTCTCAAATTTCCTTTTCCAGGAATCCATCTTCGGGATTACGAGATCAAAATGTTCAAAAATCAGATGGAGTTTTTGTCAAATGGCCTAAAGGACGGAGACCGCATACAGCAATGCTGTTCTAGTTCTTGCAACATCATTTTGGCGAAAACTTCCAGAGAGATTGAAGCAAAATATATCGATTATCTCTCTGATTTAGTCGGGAAGAAGATTGTGCCCATCGGTCCACTAGTTCAAGACCCATTGGGCCAAAAAACCGACGAGGAGTCTCCGATCGATCCAGTGGCTGAACAAAAGGGAGAAGTCTTCGGTTGTGTATGTTTCCTTCGGGAAGGGTGGGAGAGGGGAATGATAGTGGAGGGTTGGGCACCACAAGCAAAGATATTGCAGAACCCTAGCGTCGGTGGGTTCGTGAGTCACTGTGGATGGAGCTCTGTGTTGGAGAGCATCAAGTTCGGCGTTCCAATTATAGCCATGCCCATGCAACTTGACCAACCAGTAAACGCCAAACTGGTAGAGGAGGTCGGCGTGGGTGTGGAGGCTAAGAGAGCAGAAGGTGGTAGTTTGCAGCGAGAAGTGATTGCGGAGGCGATCGGAAAAGTGGTGGTGAAGAAAATTGGAGAGGGCGTGAGAAGAAAGGCACTGGAAGTAAGAGACAACATGAAAAAGATTGAGGATGAAGAGATGGATGACGTTGTGGAGCAGCTGATGCAACTACGTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

406

Amino Acids

45.5

Weight (kDa)

6.08

Isoelectric Point (pI)

53.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 9 - 242 2.4e-11 Glycosyltransferase, N-terminal domain
UDPGT PF00201 282 - 349 1.9e-16 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 285 - 386 3.1e-08 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021170)

Species Orthologous Gene IDs
malus_domestica MD02G1248100.v1.1 MD02G1248200.v1.1
prunus_persica Prupe.2G085300_v2.0.a1
pyrus_communis pycom02g21250 pycom02g21260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 391, 859
AciI CCGC 3 cut(s) 450, 595, 1076
AclWI GGATC 1 cut(s) 764
AcoI YGGCCR 1 cut(s) 61
AcsI RAATTY 1 cut(s) 500
AfaI GTAC 2 cut(s) 439, 1213
AfiI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 893
AflIII ACRYGT 1 cut(s) 312
AgsI TTSAA 5 cut(s) 465, 484, 550, 659, 728
AhdI GACNNNNNGTC 1 cut(s) 757
AhlI ACTAGT 1 cut(s) 721
AjnI CCWGG 1 cut(s) 511
AleI CACNNNNGTG 1 cut(s) 143
AluBI AGCT 6 cut(s) 85, 97, 211, 404, 924, 1198
AluI AGCT 6 cut(s) 85, 97, 211, 404, 924, 1198
Alw21I GWGCWC 2 cut(s) 213, 926
Alw26I GTCTC 4 cut(s) 500, 585, 765, 1140
AlwI GGATC 1 cut(s) 764
AlwNI CAGNNNCTG 1 cut(s) 779
Ama87I CYCGRG 1 cut(s) 80
AoxI GGCC 5 cut(s) 61, 268, 303, 577, 739
ApeKI GCWGC 4 cut(s) 16, 321, 1060, 1195
ApoI RAATTY 1 cut(s) 500
AspS9I GGNCC 2 cut(s) 716, 739
AsuHPI GGTGA 3 cut(s) 91, 145, 1111
AsuNHI GCTAGC 2 cut(s) 52, 85
AvaI CYCGRG 1 cut(s) 80
AvaII GGWCC 1 cut(s) 716
BaeGI GKGCMC 3 cut(s) 394, 711, 862
BanI GGYRCC 2 cut(s) 391, 859
BanII GRGCYC 2 cut(s) 213, 926
BarI GAAGNNNNNNTAC 2 cut(s) 801, 833
BbsI GAAGAC 1 cut(s) 790
Bbv12I GWGCWC 2 cut(s) 213, 926
BbvI GCAGC 4 cut(s) 28, 333, 1072, 1207
BccI CCATC 8 cut(s) 167, 222, 288, 528, 553, 719, 912, 1171
BceAI ACGGC 1 cut(s) 76
BcgI CGANNNNNNTGC 2 cut(s) 928, 962
BciT130I CCWGG 1 cut(s) 513
BcoDI GTCTC 4 cut(s) 500, 585, 765, 1140
BcuI ACTAGT 1 cut(s) 721
BfaI CTAG 6 cut(s) 53, 86, 401, 615, 722, 888
BisI GCNGC 5 cut(s) 17, 322, 450, 1061, 1196
BlsI GCNGC 5 cut(s) 18, 323, 451, 1062, 1197
Bme1390I CCNGG 1 cut(s) 513
Bme18I GGWCC 1 cut(s) 716
BmeRI GACNNNNNGTC 1 cut(s) 757
BmeT110I CYCGRG 1 cut(s) 80
BmgT120I GGNCC 2 cut(s) 716, 739
BmiI GGNNCC 2 cut(s) 393, 861
BmrFI CCNGG 1 cut(s) 513
BmsI GCATC 2 cut(s) 948, 1191
BmtI GCTAGC 2 cut(s) 56, 89
BpiI GAAGAC 1 cut(s) 790
Bsa29I ATCGAT 3 cut(s) 477, 672, 768
BsaAI YACGTR 1 cut(s) 1211
BsaI GGTCTC 2 cut(s) 500, 585
BsaJI CCNNGG 3 cut(s) 47, 58, 386
BsaWI WCCGGW 1 cut(s) 491
BsaXI ACNNNNNCTCC 4 cut(s) 554, 584, 1104, 1134
Bsc4I CCNNNNNNNGG 4 cut(s) 388, 512, 526, 893
Bse1I ACTGG 4 cut(s) 773, 989, 1008, 1140
Bse3DI GCAATG 1 cut(s) 611
BseBI CCWGG 1 cut(s) 513
BseCI ATCGAT 3 cut(s) 477, 672, 768
BseDI CCNNGG 3 cut(s) 47, 58, 386
BseGI GGATG 4 cut(s) 336, 923, 1174, 1186
BseLI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 893
BseMI GCAATG 1 cut(s) 611
BseMII CTCAG 1 cut(s) 26
BseNI ACTGG 4 cut(s) 773, 989, 1008, 1140
BseRI GAGGAG 3 cut(s) 237, 770, 1025
BseSI GKGCMC 3 cut(s) 394, 711, 862
BseXI GCAGC 4 cut(s) 28, 333, 1072, 1207
Bsh1285I CGRYCG 2 cut(s) 768, 1086
BshFI GGCC 5 cut(s) 63, 270, 305, 579, 741
BshNI GGYRCC 2 cut(s) 391, 859
BshVI ATCGAT 3 cut(s) 477, 672, 768
BsiEI CGRYCG 2 cut(s) 768, 1086
BsiHKAI GWGCWC 2 cut(s) 213, 926
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 1 cut(s) 492
BslI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 893
BsmAI GTCTC 4 cut(s) 500, 585, 765, 1140
BsnI GGCC 5 cut(s) 63, 270, 305, 579, 741
Bso31I GGTCTC 2 cut(s) 500, 585
BsoBI CYCGRG 1 cut(s) 80
Bsp1286I GDGCHC 5 cut(s) 213, 394, 711, 862, 926
Bsp143I GATC 4 cut(s) 537, 765, 769, 1083
Bsp19I CCATGG 2 cut(s) 47, 386
BspACI CCGC 3 cut(s) 450, 595, 1076
BspANI GGCC 5 cut(s) 63, 270, 305, 579, 741
BspCNI CTCAG 1 cut(s) 25
BspDI ATCGAT 3 cut(s) 477, 672, 768
BspLI GGNNCC 2 cut(s) 393, 861
BspOI GCTAGC 2 cut(s) 56, 89
BspPI GGATC 1 cut(s) 764
BspT107I GGYRCC 2 cut(s) 391, 859
BspTNI GGTCTC 2 cut(s) 500, 585
BsrDI GCAATG 1 cut(s) 611
BsrI ACTGG 4 cut(s) 773, 989, 1008, 1140
BssECI CCNNGG 3 cut(s) 47, 58, 386
BssMI GATC 4 cut(s) 537, 765, 769, 1083
BssT1I CCWWGG 2 cut(s) 47, 386
Bst2UI CCWGG 1 cut(s) 513
Bst4CI ACNGT 1 cut(s) 914
Bst6I CTCTTC 1 cut(s) 1167
BstAPI GCANNNNNTGC 1 cut(s) 1201
BstBAI YACGTR 1 cut(s) 1211
BstC8I GCNNGC 2 cut(s) 54, 87
BstDEI CTNAG 2 cut(s) 12, 1035
BstDSI CCRYGG 3 cut(s) 47, 58, 386
BstENI CCTNNNNNAGG 1 cut(s) 510
BstF5I GGATG 4 cut(s) 336, 923, 1174, 1186
BstKTI GATC 4 cut(s) 540, 768, 772, 1086
BstMAI GTCTC 4 cut(s) 500, 585, 765, 1140
BstMBI GATC 4 cut(s) 537, 765, 769, 1083
BstMCI CGRYCG 2 cut(s) 768, 1086
BstMWI GCNNNNNNNGC 4 cut(s) 49, 866, 1040, 1201
BstNI CCWGG 1 cut(s) 513
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 1 cut(s) 511
BstSLI GKGCMC 3 cut(s) 394, 711, 862
BstSNI TACGTA 1 cut(s) 1211
BstV1I GCAGC 4 cut(s) 28, 333, 1072, 1207
BstV2I GAAGAC 1 cut(s) 790
Bsu15I ATCGAT 3 cut(s) 477, 672, 768
BsuRI GGCC 5 cut(s) 63, 270, 305, 579, 741
BsuTUI ATCGAT 3 cut(s) 477, 672, 768
BtgI CCRYGG 3 cut(s) 47, 58, 386
BtsCI GGATG 4 cut(s) 336, 923, 1174, 1186
BtsI GCAGTG 1 cut(s) 190
BtsIMutI CAGTG 4 cut(s) 190, 780, 910, 1133
Cac8I GCNNGC 2 cut(s) 54, 87
CaiI CAGNNNCTG 1 cut(s) 779
Cfr13I GGNCC 2 cut(s) 716, 739
ClaI ATCGAT 3 cut(s) 477, 672, 768
CseI GACGC 1 cut(s) 880
Csp6I GTAC 2 cut(s) 438, 1212
CviAII CATG 8 cut(s) 48, 286, 313, 387, 442, 967, 973, 1153
CviQI GTAC 2 cut(s) 438, 1212
DdeI CTNAG 2 cut(s) 12, 1035
DpnI GATC 4 cut(s) 539, 767, 771, 1085
DpnII GATC 4 cut(s) 537, 765, 769, 1083
DriI GACNNNNNGTC 1 cut(s) 757
EaeI YGGCCR 1 cut(s) 61
Eam1104I CTCTTC 1 cut(s) 1167
Eam1105I GACNNNNNGTC 1 cut(s) 757
EarI CTCTTC 1 cut(s) 1167
Ecl136II GAGCTC 2 cut(s) 211, 924
Eco105I TACGTA 1 cut(s) 1211
Eco130I CCWWGG 2 cut(s) 47, 386
Eco147I AGGCCT 1 cut(s) 305
Eco24I GRGCYC 2 cut(s) 213, 926
Eco31I GGTCTC 2 cut(s) 500, 585
Eco47I GGWCC 1 cut(s) 716
Eco53kI GAGCTC 2 cut(s) 211, 924
Eco88I CYCGRG 1 cut(s) 80
EcoICRI GAGCTC 2 cut(s) 211, 924
EcoNI CCTNNNNNAGG 1 cut(s) 510
EcoRII CCWGG 1 cut(s) 511
EcoT14I CCWWGG 2 cut(s) 47, 386
EcoT38I GRGCYC 2 cut(s) 213, 926
ErhI CCWWGG 2 cut(s) 47, 386
FaeI CATG 8 cut(s) 51, 289, 316, 390, 445, 970, 976, 1156
FatI CATG 8 cut(s) 47, 285, 312, 386, 441, 966, 972, 1152
Fnu4HI GCNGC 5 cut(s) 17, 322, 450, 1061, 1196
FokI GGATG 4 cut(s) 323, 930, 1181, 1193
FriOI GRGCYC 2 cut(s) 213, 926
Fsp4HI GCNGC 5 cut(s) 17, 322, 450, 1061, 1196
FspBI CTAG 6 cut(s) 53, 86, 401, 615, 722, 888
GluI GCNGC 5 cut(s) 17, 322, 450, 1061, 1196
HaeIII GGCC 5 cut(s) 63, 270, 305, 579, 741
HapII CCGG 1 cut(s) 492
HgaI GACGC 1 cut(s) 880
Hin1II CATG 8 cut(s) 51, 289, 316, 390, 445, 970, 976, 1156
HinfI GANTC 4 cut(s) 148, 516, 758, 907
HpaII CCGG 1 cut(s) 492
HphI GGTGA 3 cut(s) 91, 145, 1111
Hpy166II GTNNAC 3 cut(s) 291, 719, 994
Hpy188I TCNGA 5 cut(s) 178, 558, 685, 765, 1088
Hpy188III TCNNGA 7 cut(s) 236, 527, 648, 694, 728, 821, 904
Hpy8I GTNNAC 3 cut(s) 291, 719, 994
Hpy99I CGWCG 3 cut(s) 431, 755, 896
HpyAV CCTTC 5 cut(s) 85, 316, 818, 827, 1040
HpyCH4III ACNGT 1 cut(s) 914
HpyCH4IV ACGT 2 cut(s) 1185, 1210
HpyCH4V TGCA 6 cut(s) 195, 624, 880, 976, 1060, 1204
HpyF10VI GCNNNNNNNGC 4 cut(s) 49, 866, 1040, 1201
HpyF3I CTNAG 2 cut(s) 12, 1035
HpySE526I ACGT 2 cut(s) 1185, 1210
Hsp92II CATG 8 cut(s) 51, 289, 316, 390, 445, 970, 976, 1156
Kzo9I GATC 4 cut(s) 537, 765, 769, 1083
LmnI GCTCC 4 cut(s) 208, 216, 921, 1192
Lsp1109I GCAGC 4 cut(s) 28, 333, 1072, 1207
LweI GCATC 2 cut(s) 948, 1191
MaeI CTAG 6 cut(s) 53, 86, 401, 615, 722, 888
MaeII ACGT 2 cut(s) 1185, 1210
MaeIII GTNAC 1 cut(s) 908
MalI GATC 4 cut(s) 539, 767, 771, 1085
MboI GATC 4 cut(s) 537, 765, 769, 1083
MboII GAAGA 7 cut(s) 515, 709, 712, 790, 1114, 1137, 1184
MhlI GDGCHC 5 cut(s) 213, 394, 711, 862, 926
MluCI AATT 4 cut(s) 487, 500, 957, 1107
MlyI GAGTC 2 cut(s) 767, 916
MmeI TCCRAC 3 cut(s) 357, 406, 912
MslI CAYNNNNRTG 2 cut(s) 143, 971
MspA1I CMGCKG 1 cut(s) 1198
MspI CCGG 1 cut(s) 492
MspR9I CCNGG 1 cut(s) 513
MvaI CCWGG 1 cut(s) 513
MwoI GCNNNNNNNGC 4 cut(s) 49, 866, 1040, 1201
NcoI CCATGG 2 cut(s) 47, 386
NdeII GATC 4 cut(s) 537, 765, 769, 1083
NheI GCTAGC 2 cut(s) 52, 85
NlaIII CATG 8 cut(s) 51, 289, 316, 390, 445, 970, 976, 1156
NlaIV GGNNCC 2 cut(s) 393, 861
NmuCI GTSAC 1 cut(s) 908
NspI RCATGY 1 cut(s) 316
OliI CACNNNNGTG 1 cut(s) 143
PaeR7I CTCGAG 1 cut(s) 80
PceI AGGCCT 1 cut(s) 305
PciI ACATGT 1 cut(s) 312
PcsI WCGNNNNNNNCGW 1 cut(s) 900
PfeI GAWTC 2 cut(s) 148, 516
PfoI TCCNGGA 1 cut(s) 511
PkrI GCNGC 5 cut(s) 18, 323, 451, 1062, 1197
Ple19I CGATCG 2 cut(s) 768, 1086
PleI GAGTC 2 cut(s) 766, 915
PpsI GAGTC 2 cut(s) 766, 915
Ppu21I YACGTR 1 cut(s) 1211
PscI ACATGT 1 cut(s) 312
Psp124BI GAGCTC 2 cut(s) 213, 926
Psp6I CCWGG 1 cut(s) 511
PspGI CCWGG 1 cut(s) 511
PspN4I GGNNCC 2 cut(s) 393, 861
PspPI GGNCC 2 cut(s) 716, 739
PspXI VCTCGAGB 1 cut(s) 80
PstNI CAGNNNCTG 1 cut(s) 779
PvuI CGATCG 2 cut(s) 768, 1086
PvuII CAGCTG 1 cut(s) 1198
RsaI GTAC 2 cut(s) 439, 1213
RsaNI GTAC 2 cut(s) 438, 1212
RseI CAYNNNNRTG 2 cut(s) 143, 971
SacI GAGCTC 2 cut(s) 213, 926
SatI GCNGC 5 cut(s) 17, 322, 450, 1061, 1196
Sau3AI GATC 4 cut(s) 537, 765, 769, 1083
Sau96I GGNCC 2 cut(s) 716, 739
SchI GAGTC 2 cut(s) 767, 916
ScrFI CCNGG 1 cut(s) 513
SduI GDGCHC 5 cut(s) 213, 394, 711, 862, 926
SfaNI GCATC 2 cut(s) 948, 1191
Sfr274I CTCGAG 1 cut(s) 80
SinI GGWCC 1 cut(s) 716
SlaI CTCGAG 1 cut(s) 80
SmiMI CAYNNNNRTG 2 cut(s) 143, 971
SmlI CTYRAG 1 cut(s) 80
SmoI CTYRAG 1 cut(s) 80
SnaBI TACGTA 1 cut(s) 1211
SpeI ACTAGT 1 cut(s) 721
Sse9I AATT 4 cut(s) 487, 500, 957, 1107
SseBI AGGCCT 1 cut(s) 305
SsiI CCGC 3 cut(s) 450, 595, 1076
SspI AATATT 1 cut(s) 418
SspMI CTAG 6 cut(s) 53, 86, 401, 615, 722, 888
SstI GAGCTC 2 cut(s) 213, 926
StuI AGGCCT 1 cut(s) 305
StyD4I CCNGG 1 cut(s) 511
StyI CCWWGG 2 cut(s) 47, 386
TaaI ACNGT 1 cut(s) 914
TaiI ACGT 2 cut(s) 1188, 1213
TaqI TCGA 6 cut(s) 81, 309, 429, 477, 672, 768
TaqII GACCGA 1 cut(s) 704
TasI AATT 4 cut(s) 487, 500, 957, 1107
TauI GCSGC 1 cut(s) 452
TfiI GAWTC 2 cut(s) 148, 516
TscAI CASTG 4 cut(s) 197, 780, 917, 1140
TseFI GTSAC 1 cut(s) 908
TseI GCWGC 4 cut(s) 16, 321, 1060, 1195
Tsp45I GTSAC 1 cut(s) 908
TspDTI ATGAA 3 cut(s) 458, 1169, 1185
TspGWI ACGGA 3 cut(s) 411, 415, 603
TspRI CASTG 4 cut(s) 197, 780, 917, 1140
VpaK11BI GGWCC 1 cut(s) 716
XagI CCTNNNNNAGG 1 cut(s) 510
XapI RAATTY 1 cut(s) 500
XceI RCATGY 1 cut(s) 316
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
XhoI CTCGAG 1 cut(s) 80
XspI CTAG 6 cut(s) 53, 86, 401, 615, 722, 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.