MD02G1248200.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0021170
Physical Location & Seq
Forward (+)
29895232 .. 29896752
1521 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1248200.v1.1.491

Sequence Viewer

Length: 1365 bp
ATGGTTTATTCTCAGCAGCACAGAAGCATTAGTATTCTTATGCTTCCATGGCTAGCCCACGGCCACATTTCTCCCTTCCTCGAGCTAGCCAAGAAACTCACCCATAAGAGAAACAATCTCCACTTCTACATTTGTTCCACCCCTGTGAATCTCACCTCCATCAAACCCAAACTCTCTGAAAAATACTCTCACTGCATTGAGTTTGTGGAGCTCCATCTTCCGCACGATGAGTTTCCTGAACTGCCTCCTCACTACCATACCACCAATGGCCTCCCACCCCATCTCATGTCCACTCTCAAAAAGGCCTTCGACATGTCCAGCAGCAACTTCTCCAACATCCTCCAAACCCTAAAACCAGATTTGCTCATTTATGATTTTCTCCAACCATGGGCACCCTCTCTAGCTTTGTCGCACAATATTCCGGCCGTCGAGTTCTGTACCATGAACGCCGCCACCATTATTTCAACTTTCGTCATCCATTTCAATAATTCCAGTCTCAAATTTCCTTTTCCAGGAATCCATCTTCGGGATTACGAGATCAAAATGTTCAAAAATCAGATGGAGTTTTTGTCAAATGGCCTAAGGGACGGAGACCGCATACAGCAATGCTGTTCTAGTTCTTGCAACATCATTTTGGTGAAAACTTCCAGAGAGATTGAAGCAAAATATATCGATTATCTCTCTGGTTTAGTCGGGAAGAAGATTGTGCCCGTCGGTCCACTAGTTCAAGACCCATTGGGCCAAAAAACCGACGAGGAGTCTCCGATCATCCAGTGGCTGAACAAAAGGGAGAAGTGTTCAGTTGTGTATGTTTCCTTCGGGAGTGAGTACTTTTTGTCCAAGGAGGAAATAGAAGAGATAGCTCATGGGTTAGAGCTCAGCAAAGTGAGTTTCATTTGGGTTATTAGGTTTCCCAAGGAAGACAAAACCACAAAAGTTGAAGAGGTATTGCCAAAATGGTTTGTAGAGAGGGTGGGAGAGAGGGGAATGATAGTGGAGGGTTGGGCACCGCAAGCAAAGATATTGCAGCACCCTAGCGTCGGTGGGTTCGTGAGCCACTGTGGATGGAGCTCTGTGTTGGAGAGCATCAAGTTCGGCGTTCCAATTATAGCCATGCCAATGCAACTTGACCAACCAGTAAACGCCAAACTGGTAGAGGAGGTCAACGTGGGTGTGGAGGCTAAGAGAGCAGAAGGTGGTGGTTTGCAGCGAGAAGCGATTGCGGAGGCGATCGGAGAGGTGGTGGTGAAGAAAATTGGAGAGGGTGTGAGAAGGAAGGCACTGGAAGTAAGAGACAACATGAAAAAGATTGAGGATGAAGAGATGGATAACGTTGTGGAGCAGCTGTTGCAACTATGTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

455

Amino Acids

51.44

Weight (kDa)

6.3

Isoelectric Point (pI)

56.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 9 - 242 2.2e-11 Glycosyltransferase, N-terminal domain
UDPGT PF00201 265 - 415 4.6e-21 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 334 - 434 2.2e-06 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021170)

Species Orthologous Gene IDs
malus_domestica MD02G1248100.v1.1 MD02G1248200.v1.1
prunus_persica Prupe.2G085300_v2.0.a1
pyrus_communis pycom02g21250 pycom02g21260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 391, 1006
AciI CCGC 5 cut(s) 221, 450, 595, 1010, 1223
AclI AACGTT 1 cut(s) 1332
AcoI YGGCCR 2 cut(s) 61, 423
AcsI RAATTY 1 cut(s) 500
AfaI GTAC 3 cut(s) 439, 830, 1360
AfiI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 1040
AflIII ACRYGT 1 cut(s) 312
AgsI TTSAA 6 cut(s) 465, 484, 550, 659, 728, 941
AhdI GACNNNNNGTC 1 cut(s) 757
AhlI ACTAGT 1 cut(s) 721
AjnI CCWGG 1 cut(s) 511
AleI CACNNNNGTG 1 cut(s) 143
AluBI AGCT 7 cut(s) 85, 211, 404, 863, 877, 1071, 1345
AluI AGCT 7 cut(s) 85, 211, 404, 863, 877, 1071, 1345
Alw21I GWGCWC 3 cut(s) 213, 879, 1073
Alw26I GTCTC 4 cut(s) 500, 585, 765, 1287
AlwNI CAGNNNCTG 1 cut(s) 778
Ama87I CYCGRG 1 cut(s) 80
AoxI GGCC 6 cut(s) 61, 268, 303, 423, 577, 739
ApeKI GCWGC 5 cut(s) 16, 321, 1027, 1207, 1342
ApoI RAATTY 1 cut(s) 500
AspS9I GGNCC 2 cut(s) 716, 739
AsuHPI GGTGA 4 cut(s) 91, 145, 649, 1258
AsuNHI GCTAGC 2 cut(s) 52, 85
AvaI CYCGRG 1 cut(s) 80
AvaII GGWCC 1 cut(s) 716
AxyI CCTNAGG 1 cut(s) 581
BaeGI GKGCMC 3 cut(s) 394, 711, 1009
BanI GGYRCC 2 cut(s) 391, 1006
BanII GRGCYC 3 cut(s) 213, 879, 1073
BarI GAAGNNNNNNTAC 2 cut(s) 800, 832
BbsI GAAGAC 1 cut(s) 927
Bbv12I GWGCWC 3 cut(s) 213, 879, 1073
BbvI GCAGC 5 cut(s) 28, 333, 1039, 1219, 1354
BccI CCATC 7 cut(s) 167, 222, 288, 528, 553, 1059, 1318
BceAI ACGGC 2 cut(s) 76, 410
BcgI CGANNNNNNTGC 2 cut(s) 1075, 1109
BciT130I CCWGG 1 cut(s) 513
BcoDI GTCTC 4 cut(s) 500, 585, 765, 1287
BcuI ACTAGT 1 cut(s) 721
BfaI CTAG 6 cut(s) 53, 86, 401, 615, 722, 1035
BisI GCNGC 6 cut(s) 17, 322, 450, 1028, 1208, 1343
BlpI GCTNAGC 1 cut(s) 878
BlsI GCNGC 6 cut(s) 18, 323, 451, 1029, 1209, 1344
BmcAI AGTACT 1 cut(s) 830
Bme1390I CCNGG 1 cut(s) 513
Bme18I GGWCC 1 cut(s) 716
BmeRI GACNNNNNGTC 1 cut(s) 757
BmeT110I CYCGRG 1 cut(s) 80
BmgT120I GGNCC 2 cut(s) 716, 739
BmiI GGNNCC 2 cut(s) 393, 1008
BmrFI CCNGG 1 cut(s) 513
BmsI GCATC 1 cut(s) 1095
BmtI GCTAGC 2 cut(s) 56, 89
BpiI GAAGAC 1 cut(s) 927
Bpu1102I GCTNAGC 1 cut(s) 878
Bsa29I ATCGAT 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 585
BsaJI CCNNGG 5 cut(s) 47, 58, 386, 840, 915
BsaXI ACNNNNNCTCC 8 cut(s) 554, 584, 1227, 1251, 1257, 1281, 1331, 1361
Bsc4I CCNNNNNNNGG 4 cut(s) 388, 512, 526, 1040
Bse1I ACTGG 5 cut(s) 492, 772, 1136, 1155, 1287
Bse21I CCTNAGG 1 cut(s) 581
Bse3DI GCAATG 1 cut(s) 611
BseBI CCWGG 1 cut(s) 513
BseCI ATCGAT 1 cut(s) 672
BseDI CCNNGG 5 cut(s) 47, 58, 386, 840, 915
BseGI GGATG 5 cut(s) 336, 474, 768, 1070, 1321
BseLI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 1040
BseMI GCAATG 1 cut(s) 611
BseMII CTCAG 2 cut(s) 26, 892
BseNI ACTGG 5 cut(s) 492, 772, 1136, 1155, 1287
BseRI GAGGAG 3 cut(s) 237, 770, 1172
BseSI GKGCMC 3 cut(s) 394, 711, 1009
BseX3I CGGCCG 1 cut(s) 423
BseXI GCAGC 5 cut(s) 28, 333, 1039, 1219, 1354
Bsh1285I CGRYCG 2 cut(s) 426, 1233
BshFI GGCC 6 cut(s) 63, 270, 305, 425, 579, 741
BshNI GGYRCC 2 cut(s) 391, 1006
BshVI ATCGAT 1 cut(s) 672
BsiEI CGRYCG 2 cut(s) 426, 1233
BsiHKAI GWGCWC 3 cut(s) 213, 879, 1073
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 1 cut(s) 422
BslFI GGGAC 1 cut(s) 599
BslI CCNNNNNNNGG 4 cut(s) 388, 512, 526, 1040
BsmAI GTCTC 4 cut(s) 500, 585, 765, 1287
BsmFI GGGAC 1 cut(s) 599
BsnI GGCC 6 cut(s) 63, 270, 305, 425, 579, 741
Bso31I GGTCTC 1 cut(s) 585
BsoBI CYCGRG 1 cut(s) 80
Bsp1286I GDGCHC 6 cut(s) 213, 394, 711, 879, 1009, 1073
Bsp1407I TGTACA 1 cut(s) 1358
Bsp143I GATC 3 cut(s) 537, 765, 1230
Bsp1720I GCTNAGC 1 cut(s) 878
Bsp19I CCATGG 2 cut(s) 47, 386
BspACI CCGC 5 cut(s) 221, 450, 595, 1010, 1223
BspANI GGCC 6 cut(s) 63, 270, 305, 425, 579, 741
BspCNI CTCAG 2 cut(s) 25, 891
BspDI ATCGAT 1 cut(s) 672
BspLI GGNNCC 2 cut(s) 393, 1008
BspOI GCTAGC 2 cut(s) 56, 89
BspT107I GGYRCC 2 cut(s) 391, 1006
BspTNI GGTCTC 1 cut(s) 585
BsrDI GCAATG 1 cut(s) 611
BsrGI TGTACA 1 cut(s) 1358
BsrI ACTGG 5 cut(s) 492, 772, 1136, 1155, 1287
BssECI CCNNGG 5 cut(s) 47, 58, 386, 840, 915
BssMI GATC 3 cut(s) 537, 765, 1230
BssT1I CCWWGG 4 cut(s) 47, 386, 840, 915
Bst2UI CCWGG 1 cut(s) 513
Bst4CI ACNGT 1 cut(s) 1061
Bst6I CTCTTC 3 cut(s) 849, 936, 1314
BstAPI GCANNNNNTGC 1 cut(s) 1348
BstAUI TGTACA 1 cut(s) 1358
BstC8I GCNNGC 3 cut(s) 54, 87, 1014
BstDEI CTNAG 4 cut(s) 12, 581, 878, 1182
BstDSI CCRYGG 3 cut(s) 47, 58, 386
BstENI CCTNNNNNAGG 1 cut(s) 510
BstF5I GGATG 5 cut(s) 336, 474, 768, 1070, 1321
BstKTI GATC 3 cut(s) 540, 768, 1233
BstMAI GTCTC 4 cut(s) 500, 585, 765, 1287
BstMBI GATC 3 cut(s) 537, 765, 1230
BstMCI CGRYCG 2 cut(s) 426, 1233
BstMWI GCNNNNNNNGC 4 cut(s) 49, 1013, 1187, 1348
BstNI CCWGG 1 cut(s) 513
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 1 cut(s) 511
BstSLI GKGCMC 3 cut(s) 394, 711, 1009
BstV1I GCAGC 5 cut(s) 28, 333, 1039, 1219, 1354
BstV2I GAAGAC 1 cut(s) 927
BstZI CGGCCG 1 cut(s) 423
Bsu15I ATCGAT 1 cut(s) 672
Bsu36I CCTNAGG 1 cut(s) 581
BsuRI GGCC 6 cut(s) 63, 270, 305, 425, 579, 741
BsuTUI ATCGAT 1 cut(s) 672
BtgI CCRYGG 3 cut(s) 47, 58, 386
BtsCI GGATG 5 cut(s) 336, 474, 768, 1070, 1321
BtsI GCAGTG 1 cut(s) 190
BtsIMutI CAGTG 4 cut(s) 190, 779, 1057, 1280
Cac8I GCNNGC 3 cut(s) 54, 87, 1014
CaiI CAGNNNCTG 1 cut(s) 778
Cfr13I GGNCC 2 cut(s) 716, 739
ClaI ATCGAT 1 cut(s) 672
CseI GACGC 1 cut(s) 1027
Csp6I GTAC 3 cut(s) 438, 829, 1359
CspCI CAANNNNNGTGG 2 cut(s) 919, 954
CviAII CATG 8 cut(s) 48, 286, 313, 387, 442, 866, 1114, 1300
CviQI GTAC 3 cut(s) 438, 829, 1359
DdeI CTNAG 4 cut(s) 12, 581, 878, 1182
DpnI GATC 3 cut(s) 539, 767, 1232
DpnII GATC 3 cut(s) 537, 765, 1230
DriI GACNNNNNGTC 1 cut(s) 757
EaeI YGGCCR 2 cut(s) 61, 423
EagI CGGCCG 1 cut(s) 423
Eam1104I CTCTTC 3 cut(s) 849, 936, 1314
Eam1105I GACNNNNNGTC 1 cut(s) 757
EarI CTCTTC 3 cut(s) 849, 936, 1314
Ecl136II GAGCTC 3 cut(s) 211, 877, 1071
EclXI CGGCCG 1 cut(s) 423
Eco130I CCWWGG 4 cut(s) 47, 386, 840, 915
Eco147I AGGCCT 1 cut(s) 305
Eco24I GRGCYC 3 cut(s) 213, 879, 1073
Eco31I GGTCTC 1 cut(s) 585
Eco47I GGWCC 1 cut(s) 716
Eco52I CGGCCG 1 cut(s) 423
Eco53kI GAGCTC 3 cut(s) 211, 877, 1071
Eco81I CCTNAGG 1 cut(s) 581
Eco88I CYCGRG 1 cut(s) 80
EcoICRI GAGCTC 3 cut(s) 211, 877, 1071
EcoNI CCTNNNNNAGG 1 cut(s) 510
EcoRII CCWGG 1 cut(s) 511
EcoT14I CCWWGG 4 cut(s) 47, 386, 840, 915
EcoT38I GRGCYC 3 cut(s) 213, 879, 1073
ErhI CCWWGG 4 cut(s) 47, 386, 840, 915
FaeI CATG 8 cut(s) 51, 289, 316, 390, 445, 869, 1117, 1303
FaqI GGGAC 1 cut(s) 599
FatI CATG 8 cut(s) 47, 285, 312, 386, 441, 865, 1113, 1299
Fnu4HI GCNGC 6 cut(s) 17, 322, 450, 1028, 1208, 1343
FokI GGATG 5 cut(s) 323, 461, 755, 1077, 1328
FriOI GRGCYC 3 cut(s) 213, 879, 1073
Fsp4HI GCNGC 6 cut(s) 17, 322, 450, 1028, 1208, 1343
FspBI CTAG 6 cut(s) 53, 86, 401, 615, 722, 1035
GluI GCNGC 6 cut(s) 17, 322, 450, 1028, 1208, 1343
HaeIII GGCC 6 cut(s) 63, 270, 305, 425, 579, 741
HapII CCGG 1 cut(s) 422
HgaI GACGC 1 cut(s) 1027
Hin1II CATG 8 cut(s) 51, 289, 316, 390, 445, 869, 1117, 1303
HincII GTYRAC 1 cut(s) 1165
HindII GTYRAC 1 cut(s) 1165
HinfI GANTC 3 cut(s) 148, 516, 758
HpaII CCGG 1 cut(s) 422
HphI GGTGA 4 cut(s) 91, 145, 649, 1258
Hpy166II GTNNAC 4 cut(s) 291, 719, 1141, 1165
Hpy188I TCNGA 4 cut(s) 178, 558, 765, 1235
Hpy188III TCNNGA 7 cut(s) 236, 527, 648, 694, 728, 820, 1051
Hpy8I GTNNAC 4 cut(s) 291, 719, 1141, 1165
Hpy99I CGWCG 4 cut(s) 431, 716, 755, 1043
HpyAV CCTTC 6 cut(s) 85, 316, 826, 1187, 1266, 1270
HpyCH4III ACNGT 1 cut(s) 1061
HpyCH4IV ACGT 2 cut(s) 1167, 1332
HpyCH4V TGCA 6 cut(s) 195, 624, 1027, 1123, 1207, 1351
HpyF10VI GCNNNNNNNGC 4 cut(s) 49, 1013, 1187, 1348
HpyF3I CTNAG 4 cut(s) 12, 581, 878, 1182
HpySE526I ACGT 2 cut(s) 1167, 1332
Hsp92II CATG 8 cut(s) 51, 289, 316, 390, 445, 869, 1117, 1303
Kzo9I GATC 3 cut(s) 537, 765, 1230
LmnI GCTCC 4 cut(s) 208, 216, 1068, 1339
Lsp1109I GCAGC 5 cut(s) 28, 333, 1039, 1219, 1354
LweI GCATC 1 cut(s) 1095
MaeI CTAG 6 cut(s) 53, 86, 401, 615, 722, 1035
MaeII ACGT 2 cut(s) 1167, 1332
MalI GATC 3 cut(s) 539, 767, 1232
MboI GATC 3 cut(s) 537, 765, 1230
MboII GAAGA 9 cut(s) 209, 515, 709, 712, 866, 932, 953, 1261, 1331
MhlI GDGCHC 6 cut(s) 213, 394, 711, 879, 1009, 1073
MluCI AATT 4 cut(s) 487, 500, 1104, 1254
MlyI GAGTC 1 cut(s) 767
MmeI TCCRAC 3 cut(s) 357, 406, 1059
MslI CAYNNNNRTG 3 cut(s) 143, 635, 1118
MspA1I CMGCKG 1 cut(s) 1345
MspI CCGG 1 cut(s) 422
MspR9I CCNGG 1 cut(s) 513
MvaI CCWGG 1 cut(s) 513
MwoI GCNNNNNNNGC 4 cut(s) 49, 1013, 1187, 1348
NcoI CCATGG 2 cut(s) 47, 386
NdeII GATC 3 cut(s) 537, 765, 1230
NheI GCTAGC 2 cut(s) 52, 85
NlaIII CATG 8 cut(s) 51, 289, 316, 390, 445, 869, 1117, 1303
NlaIV GGNNCC 2 cut(s) 393, 1008
NspI RCATGY 1 cut(s) 316
OliI CACNNNNGTG 1 cut(s) 143
PaeR7I CTCGAG 1 cut(s) 80
PceI AGGCCT 1 cut(s) 305
PciI ACATGT 1 cut(s) 312
PcsI WCGNNNNNNNCGW 1 cut(s) 1047
PfeI GAWTC 2 cut(s) 148, 516
PfoI TCCNGGA 1 cut(s) 511
PkrI GCNGC 6 cut(s) 18, 323, 451, 1029, 1209, 1344
Ple19I CGATCG 1 cut(s) 1233
PleI GAGTC 1 cut(s) 766
PpsI GAGTC 1 cut(s) 766
PscI ACATGT 1 cut(s) 312
Psp124BI GAGCTC 3 cut(s) 213, 879, 1073
Psp1406I AACGTT 1 cut(s) 1332
Psp6I CCWGG 1 cut(s) 511
PspGI CCWGG 1 cut(s) 511
PspN4I GGNNCC 2 cut(s) 393, 1008
PspPI GGNCC 2 cut(s) 716, 739
PspXI VCTCGAGB 1 cut(s) 80
PstNI CAGNNNCTG 1 cut(s) 778
PvuI CGATCG 1 cut(s) 1233
PvuII CAGCTG 1 cut(s) 1345
RsaI GTAC 3 cut(s) 439, 830, 1360
RsaNI GTAC 3 cut(s) 438, 829, 1359
RseI CAYNNNNRTG 3 cut(s) 143, 635, 1118
SacI GAGCTC 3 cut(s) 213, 879, 1073
SatI GCNGC 6 cut(s) 17, 322, 450, 1028, 1208, 1343
Sau3AI GATC 3 cut(s) 537, 765, 1230
Sau96I GGNCC 2 cut(s) 716, 739
ScaI AGTACT 1 cut(s) 830
SchI GAGTC 1 cut(s) 767
ScrFI CCNGG 1 cut(s) 513
SduI GDGCHC 6 cut(s) 213, 394, 711, 879, 1009, 1073
SfaNI GCATC 1 cut(s) 1095
Sfr274I CTCGAG 1 cut(s) 80
SinI GGWCC 1 cut(s) 716
SlaI CTCGAG 1 cut(s) 80
SmiMI CAYNNNNRTG 3 cut(s) 143, 635, 1118
SmlI CTYRAG 1 cut(s) 80
SmoI CTYRAG 1 cut(s) 80
SpeI ACTAGT 1 cut(s) 721
Sse9I AATT 4 cut(s) 487, 500, 1104, 1254
SseBI AGGCCT 1 cut(s) 305
SsiI CCGC 5 cut(s) 221, 450, 595, 1010, 1223
SspI AATATT 1 cut(s) 418
SspMI CTAG 6 cut(s) 53, 86, 401, 615, 722, 1035
SstI GAGCTC 3 cut(s) 213, 879, 1073
StuI AGGCCT 1 cut(s) 305
StyD4I CCNGG 1 cut(s) 511
StyI CCWWGG 4 cut(s) 47, 386, 840, 915
TaaI ACNGT 1 cut(s) 1061
TaiI ACGT 2 cut(s) 1170, 1335
TaqI TCGA 4 cut(s) 81, 309, 429, 672
TaqII GACCGA 1 cut(s) 704
TasI AATT 4 cut(s) 487, 500, 1104, 1254
TatI WGTACW 2 cut(s) 828, 1358
TauI GCSGC 1 cut(s) 452
TfiI GAWTC 2 cut(s) 148, 516
TscAI CASTG 4 cut(s) 197, 779, 1064, 1287
TseI GCWGC 5 cut(s) 16, 321, 1027, 1207, 1342
TspDTI ATGAA 4 cut(s) 458, 883, 1316, 1332
TspGWI ACGGA 1 cut(s) 603
TspRI CASTG 4 cut(s) 197, 779, 1064, 1287
VpaK11BI GGWCC 1 cut(s) 716
XagI CCTNNNNNAGG 1 cut(s) 510
XapI RAATTY 1 cut(s) 500
XceI RCATGY 1 cut(s) 316
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
XhoI CTCGAG 1 cut(s) 80
XspI CTAG 6 cut(s) 53, 86, 401, 615, 722, 1035
ZrmI AGTACT 1 cut(s) 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.