MD03G1123800.v1.1

Protein of unknown function, DUF547

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0013449
Physical Location & Seq
Reverse (-)
11604707 .. 11610041
5335 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1123800.v1.1.491

Sequence Viewer

Length: 2127 bp
ATGATGTCCCACCCACAACATGATCAACCTCATCATCATCATCATCATCAGCCCGAAAGCTCCCTCTCATCTTCTTCTTCAACGCCTCAAAGTTCTTTCCATTCATCAAACCAAACGTCAACAGCAGAAACAACCAGTAGCTGCCACCCTTGCTTTGGCACTAAGCTTATTAAGTCCTCACACCAACACTGCTTTGAACATATTCAAAACCTCACAAAAAATACTGCCAACAACATCTTACCCTCTTGGCTTTATGTTGCCTCTTGTAAGCGTTGGAGTTGGCTCAAACTGAGCTGCACTGAGGTTTTGTTCATGGCGAGCCCCAGCGACTTGTCCGTTCGCACTCCGTCGGAGATTAGAAAAAAGAAACTTTCTGGGCAACGAAGGAAAGAGGAGCTTGAAAGAGAGGTTTCTTTGCTTAAAAGAATGCTTCATCAGGAAGAGAAAGTACATGAGGTTTTGGACCAAGTCCACAATCGGAAAAATGGTGATTCTGCTATTTCTATCCCAAGATTTCTTCCTCCCAAGATGAAGGAGCTTTTGGCAGAGCTAGCTATGGTTGAAGGAGAAATTGGTCGACTTGAAGGCCAAATTAGCCAAGTTCAACTTGGATTGAAGCATGAACAAGAAGCTACAAAGGAATCAAAACTATCAAACCAATGGCAACACGGAAACCTAATTAGTAACCCCATTCCTCGTGCATCAAATGTAGCAATGCCAAGCCCCATACACAGAAGTGTTAACAATGAGAGCCAGAGAATGGGGTATCATGAGACCAAGGCATTGCATTTCATAAGTAAAGCTATCAAAGGTGATTATGATCACCTTAACGACCTCAGTCCAAACGAAAAAATCGGATACTCGAGAGGGTTTTCTGATCAAAAAGAAAATTATTTCTATGAGGATGTTAAATTTCAAAATAAGCTTCCGAGAAACAATGGATCTTTGAGGGCACCCTCACCCTTGAGGGCACCCTCGCCCTTGCGAGCTCCTAGACATCCGTCACCCAAGTTAAAGGAACGTAATCCAGGGATTACTTCAGAACTGCCACCAAAATCTGTACCAATTCCAACACAATTAGAAGAGATCAGCCAGAATTGGCAACCAAACAAGCTCTCTGAGGAAATCATGAAGTGTCTAAACTTCATATACATTAGGCTGCTTAGAACAACAAGAACAATGGAAATAGAGAAGTCAGGCCCCATTTCCAGGTCTGTCAACTCTTCCATAACCTCAAGAAGCTTCAGGGACGATACTGGCGCAAATGCGAAGTCAAACCTTTTGTTACAAAAGGAGTCAAGGCAACAAGACCCTTATGGCATCTTCAATGTGGAAGAGTGTATTCCTAGAGACATTGGCCCTTACAAAAACTTGGTTACTTTCACTTCAATCTCCATGGATCCAAAATCCATTTCAGCCTCCAACTCTATTCCTTTACTAAAAAAATTAAGGGTATTGATGAACTATCTCCAGGTGGTGGATTTGGGGTCCTTGACATACCAACAGAAGCTAGCATTCTGGGTCAACATTTACAATGCTTGTATAATGAATGGTTTTCTCCAGTACGGAGTGCCTTCGTCCGTGGAAAAATTATTCGCATTGATGAACAAGGCAACTCTGAACATAGGGGGTAAGATTTTAAATGCTGAATCCATAGAGCATTACATTTTGAGGAAGCCAGCACCTTCCAGTATGCAAGAGGCTTTTCGGAATGGTGAGAAAGATGATAAAGCCATCCGCGAACTCTACGGTCTTGAGTCCATGGATCCTAATGTTACATTTGCACTGTGTTGTGGAACTCGTTCTTCTCCCGCGGTGAGGATATACACAGCTGACGGTGTTGTAGCTGAGTTGGAGAGATCAAAGTTGGAGTACCTGCAAGCATCAATTGTGGTGACCAGCTCAAAGAAAATTGTGTTCCCAGAACTACTGCTAGGAAACATGCTTGATTTTGCTGTGGATGTGGACTCACTAGTTCAGTGGGTTTGCCACCAGTTACCAACATCCGGGTCATTGCGAAAATCAATGGTGGATTGCTTCAGGGGTCAAATTGGCAGTGGCAAGATTACTACCACTGTTGAGAAAATGCCATATGATTTTGAGTTTCAGTACATATTGGCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF547 Lzipper-MIP1

Protein Analysis

709

Amino Acids

80.04

Weight (kDa)

8.99

Isoelectric Point (pI)

53.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lzipper-MIP1 PF14389 126 - 208 2e-19 Leucine-zipper of ternary complex factor MIP1
DUF547 PF04784 497 - 626 8.1e-38 Protein of unknown function, DUF547
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013449)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60720
fragaria_vesca FvH4_3g31550 FvH4_3g31550
malus_domestica MD03G1123800.v1.1 MD11G1140800.v1.1
prunus_persica Prupe.6G106400_v2.0.a1
pyrus_communis pycom11g11670
rosa_chinensis RchiOBHm_Chr5g0058191
rosa_laevigata RLG00000035202
rosa_multiflora Rmu_sc0000367.1_g000041
rosa_roxburghii Rroxscaffold_1G00022340
rosa_rugosa Rorug05G0312700 Rorug05G0312700
rosa_samantha Rh5AG380500 Rh5BG391800 Rh5CG415700 Rh5DG406300
rosa_wichuraiana Rw5G035830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1884
AccB1I GGYRCC 2 cut(s) 952, 970
AccB7I CCANNNNNTGG 2 cut(s) 760, 1477
AccI GTMKAC 1 cut(s) 577
AccII CGCG 2 cut(s) 1740, 1814
AciI CCGC 3 cut(s) 1738, 1812, 1814
AclWI GGATC 5 cut(s) 949, 1394, 1407, 1760, 1773
AcoI YGGCCR 1 cut(s) 2118
AcsI RAATTY 1 cut(s) 911
AcuI CTGAAG 3 cut(s) 1023, 1228, 2023
AfaI GTAC 5 cut(s) 450, 1062, 1565, 1874, 2111
AfiI CCNNNNNNNGG 6 cut(s) 155, 760, 1209, 1477, 1818, 2006
AhlI ACTAGT 1 cut(s) 1972
AjnI CCWGG 3 cut(s) 1027, 1208, 1470
AjuI GAANNNNNNNTTGG 6 cut(s) 524, 555, 556, 587, 1396, 1428
AleI CACNNNNGTG 1 cut(s) 735
Alw21I GWGCWC 1 cut(s) 991
Alw26I GTCTC 2 cut(s) 767, 1344
AlwI GGATC 5 cut(s) 949, 1394, 1407, 1760, 1773
AlwNI CAGNNNCTG 1 cut(s) 141
Ama87I CYCGRG 1 cut(s) 862
AoxI GGCC 4 cut(s) 586, 1198, 1357, 2118
ApeKI GCWGC 3 cut(s) 141, 294, 1159
ApoI RAATTY 1 cut(s) 911
ArsI GACNNNNNNTTYG 4 cut(s) 101, 133, 1256, 1288
Asp700I GAANNNNTTC 2 cut(s) 201, 1801
AspLEI GCGC 1 cut(s) 1262
AspS9I GGNCC 4 cut(s) 463, 1199, 1358, 1488
AsuC2I CCSGG 1 cut(s) 2008
AsuHPI GGTGA 8 cut(s) 500, 815, 824, 951, 996, 1727, 1828, 1906
AsuNHI GCTAGC 2 cut(s) 550, 1510
AvaI CYCGRG 1 cut(s) 862
AvaII GGWCC 2 cut(s) 463, 1488
BaeGI GKGCMC 2 cut(s) 955, 973
BalI TGGCCA 1 cut(s) 2120
BamHI GGATCC 2 cut(s) 1399, 1765
BanI GGYRCC 2 cut(s) 952, 970
BanII GRGCYC 2 cut(s) 323, 991
BarI GAAGNNNNNNTAC 2 cut(s) 432, 464
BauI CACGAG 1 cut(s) 696
Bbv12I GWGCWC 1 cut(s) 991
BbvI GCAGC 3 cut(s) 128, 281, 1146
BccI CCATC 1 cut(s) 1742
BciT130I CCWGG 3 cut(s) 1029, 1210, 1472
BciVI GTATCC 1 cut(s) 851
BclI TGATCA 3 cut(s) 22, 820, 877
BcnI CCSGG 1 cut(s) 2008
BcoDI GTCTC 2 cut(s) 767, 1344
BcuI ACTAGT 1 cut(s) 1972
BfaI CTAG 6 cut(s) 551, 993, 1347, 1511, 1934, 1973
BfuAI ACCTGC 1 cut(s) 1884
BfuI GTATCC 1 cut(s) 851
BisI GCNGC 3 cut(s) 142, 295, 1160
BlsI GCNGC 3 cut(s) 143, 296, 1161
Bme1390I CCNGG 4 cut(s) 1029, 1210, 1472, 2008
Bme18I GGWCC 2 cut(s) 463, 1488
BmeT110I CYCGRG 1 cut(s) 862
BmgT120I GGNCC 4 cut(s) 463, 1199, 1358, 1488
BmiI GGNNCC 6 cut(s) 954, 972, 1201, 1401, 1489, 1767
BmrFI CCNGG 4 cut(s) 1029, 1210, 1472, 2008
BmsI GCATC 3 cut(s) 710, 1329, 1892
BmtI GCTAGC 2 cut(s) 554, 1514
BoxI GACNNNNGTC 2 cut(s) 837, 1000
BpmI CTGGAG 2 cut(s) 1454, 1544
BpuEI CTTGAG 3 cut(s) 985, 1219, 1775
BpuMI CCSGG 1 cut(s) 2008
BsaBI GATNNNNATC 1 cut(s) 819
BsaI GGTCTC 1 cut(s) 767
BsaJI CCNNGG 6 cut(s) 777, 1028, 1395, 1581, 1761, 1812
Bsc4I CCNNNNNNNGG 6 cut(s) 155, 760, 1209, 1477, 1818, 2006
Bse1I ACTGG 5 cut(s) 135, 1261, 1561, 1689, 1993
Bse3DI GCAATG 3 cut(s) 720, 782, 2012
Bse8I GATNNNNATC 1 cut(s) 819
BseBI CCWGG 3 cut(s) 1029, 1210, 1472
BseDI CCNNGG 6 cut(s) 777, 1028, 1395, 1581, 1761, 1812
BseGI GGATG 5 cut(s) 910, 997, 1734, 1966, 2003
BseJI GATNNNNATC 1 cut(s) 819
BseLI CCNNNNNNNGG 6 cut(s) 155, 760, 1209, 1477, 1818, 2006
BseMI GCAATG 3 cut(s) 720, 782, 2012
BseMII CTCAG 5 cut(s) 281, 291, 850, 1110, 1839
BseNI ACTGG 5 cut(s) 135, 1261, 1561, 1689, 1993
BseRI GAGGAG 1 cut(s) 407
BseSI GKGCMC 2 cut(s) 955, 973
BseXI GCAGC 3 cut(s) 128, 281, 1146
BseYI CCCAGC 1 cut(s) 323
BsgI GTGCAG 1 cut(s) 280
Bsh1236I CGCG 2 cut(s) 1740, 1814
BshFI GGCC 4 cut(s) 588, 1200, 1359, 2120
BshNI GGYRCC 2 cut(s) 952, 970
BsiHKAI GWGCWC 1 cut(s) 991
BsiHKCI CYCGRG 1 cut(s) 862
BsiSI CCGG 1 cut(s) 2007
BslFI GGGAC 1 cut(s) 1262
BslI CCNNNNNNNGG 6 cut(s) 155, 760, 1209, 1477, 1818, 2006
BsmAI GTCTC 2 cut(s) 767, 1344
BsmFI GGGAC 1 cut(s) 1262
BsmI GAATGC 2 cut(s) 432, 1514
BsnI GGCC 4 cut(s) 588, 1200, 1359, 2120
Bso31I GGTCTC 1 cut(s) 767
BsoBI CYCGRG 1 cut(s) 862
Bsp1286I GDGCHC 4 cut(s) 323, 955, 973, 991
Bsp143I GATC 8 cut(s) 22, 820, 877, 941, 1086, 1399, 1765, 1859
Bsp19I CCATGG 2 cut(s) 1395, 1761
BspACI CCGC 3 cut(s) 1738, 1812, 1814
BspANI GGCC 4 cut(s) 588, 1200, 1359, 2120
BspCNI CTCAG 5 cut(s) 282, 292, 849, 1111, 1840
BspFNI CGCG 2 cut(s) 1740, 1814
BspHI TCATGA 2 cut(s) 769, 1128
BspLI GGNNCC 6 cut(s) 954, 972, 1201, 1401, 1489, 1767
BspMI ACCTGC 1 cut(s) 1884
BspOI GCTAGC 2 cut(s) 554, 1514
BspPI GGATC 5 cut(s) 949, 1394, 1407, 1760, 1773
BspT107I GGYRCC 2 cut(s) 952, 970
BspTNI GGTCTC 1 cut(s) 767
BsrDI GCAATG 3 cut(s) 720, 782, 2012
BsrI ACTGG 5 cut(s) 135, 1261, 1561, 1689, 1993
BssECI CCNNGG 6 cut(s) 777, 1028, 1395, 1581, 1761, 1812
BssMI GATC 8 cut(s) 22, 820, 877, 941, 1086, 1399, 1765, 1859
BssSI CACGAG 1 cut(s) 696
BssT1I CCWWGG 3 cut(s) 777, 1395, 1761
Bst2BI CACGAG 1 cut(s) 696
Bst2UI CCWGG 3 cut(s) 1029, 1210, 1472
Bst4CI ACNGT 4 cut(s) 1751, 1788, 1838, 2077
Bst6I CTCTTC 4 cut(s) 435, 1077, 1228, 1329
BstC8I GCNNGC 6 cut(s) 319, 552, 987, 1512, 1680, 1881
BstDEI CTNAG 7 cut(s) 162, 290, 300, 836, 1119, 1163, 1848
BstDSI CCRYGG 4 cut(s) 1395, 1581, 1761, 1812
BstEII GGTNACC 1 cut(s) 1894
BstF5I GGATG 5 cut(s) 910, 997, 1734, 1966, 2003
BstFNI CGCG 2 cut(s) 1740, 1814
BstHHI GCGC 1 cut(s) 1262
BstKTI GATC 8 cut(s) 25, 823, 880, 944, 1089, 1402, 1768, 1862
BstMAI GTCTC 2 cut(s) 767, 1344
BstMBI GATC 8 cut(s) 22, 820, 877, 941, 1086, 1399, 1765, 1859
BstMWI GCNNNNNNNGC 3 cut(s) 150, 551, 594
BstNI CCWGG 3 cut(s) 1029, 1210, 1472
BstNSI RCATGY 1 cut(s) 1945
BstPAI GACNNNNGTC 2 cut(s) 837, 1000
BstPI GGTNACC 1 cut(s) 1894
BstSCI CCNGG 4 cut(s) 1027, 1208, 1470, 2006
BstSLI GKGCMC 2 cut(s) 955, 973
BstUI CGCG 2 cut(s) 1740, 1814
BstV1I GCAGC 3 cut(s) 128, 281, 1146
BstX2I RGATCY 3 cut(s) 941, 1399, 1765
BstYI RGATCY 3 cut(s) 941, 1399, 1765
BsuI GTATCC 1 cut(s) 851
BsuRI GGCC 4 cut(s) 588, 1200, 1359, 2120
BtgI CCRYGG 4 cut(s) 1395, 1581, 1761, 1812
BtsCI GGATG 5 cut(s) 910, 997, 1734, 1966, 2003
BtsI GCAGTG 2 cut(s) 187, 2062
BtsIMutI CAGTG 6 cut(s) 187, 297, 1784, 1985, 2062, 2073
BveI ACCTGC 1 cut(s) 1884
Cac8I GCNNGC 6 cut(s) 319, 552, 987, 1512, 1680, 1881
CaiI CAGNNNCTG 1 cut(s) 141
CciI TCATGA 2 cut(s) 769, 1128
CfoI GCGC 1 cut(s) 1262
Cfr13I GGNCC 4 cut(s) 463, 1199, 1358, 1488
Cfr42I CCGCGG 1 cut(s) 1815
Csp6I GTAC 5 cut(s) 449, 1061, 1564, 1873, 2110
CviQI GTAC 5 cut(s) 449, 1061, 1564, 1873, 2110
DdeI CTNAG 7 cut(s) 162, 290, 300, 836, 1119, 1163, 1848
DpnI GATC 8 cut(s) 24, 822, 879, 943, 1088, 1401, 1767, 1861
DpnII GATC 8 cut(s) 22, 820, 877, 941, 1086, 1399, 1765, 1859
DraI TTTAAA 1 cut(s) 1641
EaeI YGGCCR 1 cut(s) 2118
Eam1104I CTCTTC 4 cut(s) 435, 1077, 1228, 1329
EarI CTCTTC 4 cut(s) 435, 1077, 1228, 1329
Ecl136II GAGCTC 1 cut(s) 989
Eco130I CCWWGG 3 cut(s) 777, 1395, 1761
Eco24I GRGCYC 2 cut(s) 323, 991
Eco31I GGTCTC 1 cut(s) 767
Eco47I GGWCC 2 cut(s) 463, 1488
Eco53kI GAGCTC 1 cut(s) 989
Eco57I CTGAAG 3 cut(s) 1023, 1228, 2023
Eco88I CYCGRG 1 cut(s) 862
Eco91I GGTNACC 1 cut(s) 1894
EcoICRI GAGCTC 1 cut(s) 989
EcoO109I RGGNCCY 2 cut(s) 1199, 1488
EcoO65I GGTNACC 1 cut(s) 1894
EcoRII CCWGG 3 cut(s) 1027, 1208, 1470
EcoT14I CCWWGG 3 cut(s) 777, 1395, 1761
EcoT38I GRGCYC 2 cut(s) 323, 991
ErhI CCWWGG 3 cut(s) 777, 1395, 1761
FalI AAGNNNNNCTT 4 cut(s) 381, 413, 591, 623
FaqI GGGAC 1 cut(s) 1262
FauI CCCGC 1 cut(s) 1819
FauNDI CATATG 1 cut(s) 2092
FbaI TGATCA 3 cut(s) 22, 820, 877
FblI GTMKAC 1 cut(s) 577
Fnu4HI GCNGC 3 cut(s) 142, 295, 1160
FokI GGATG 5 cut(s) 917, 984, 1721, 1973, 1990
FriOI GRGCYC 2 cut(s) 323, 991
Fsp4HI GCNGC 3 cut(s) 142, 295, 1160
FspBI CTAG 6 cut(s) 551, 993, 1347, 1511, 1934, 1973
GlaI GCGC 1 cut(s) 1261
GluI GCNGC 3 cut(s) 142, 295, 1160
GsaI CCCAGC 1 cut(s) 327
GsuI CTGGAG 2 cut(s) 1454, 1544
HaeIII GGCC 4 cut(s) 588, 1200, 1359, 2120
HapII CCGG 1 cut(s) 2007
HhaI GCGC 1 cut(s) 1262
Hin6I GCGC 1 cut(s) 1260
HinP1I GCGC 1 cut(s) 1260
HincII GTYRAC 5 cut(s) 120, 578, 742, 1219, 1525
HindII GTYRAC 5 cut(s) 120, 578, 742, 1219, 1525
HindIII AAGCTT 3 cut(s) 164, 923, 1240
HinfI GANTC 6 cut(s) 491, 641, 1295, 1649, 1757, 1967
HpaI GTTAAC 1 cut(s) 742
HpaII CCGG 1 cut(s) 2007
HphI GGTGA 8 cut(s) 500, 815, 824, 951, 996, 1727, 1828, 1906
Hpy166II GTNNAC 7 cut(s) 120, 472, 578, 742, 1219, 1525, 1966
Hpy188I TCNGA 9 cut(s) 352, 480, 857, 877, 930, 1042, 1120, 1620, 1710
Hpy188III TCNNGA 6 cut(s) 437, 770, 864, 1129, 1236, 1754
Hpy8I GTNNAC 7 cut(s) 120, 472, 578, 742, 1219, 1525, 1966
Hpy99I CGWCG 1 cut(s) 352
HpyAV CCTTC 6 cut(s) 378, 526, 557, 578, 1584, 1695
HpyCH4III ACNGT 4 cut(s) 1751, 1788, 1838, 2077
HpyCH4IV ACGT 2 cut(s) 116, 1021
HpyCH4V TGCA 6 cut(s) 297, 701, 787, 1696, 1784, 1879
HpyF10VI GCNNNNNNNGC 3 cut(s) 150, 551, 594
HpyF3I CTNAG 7 cut(s) 162, 290, 300, 836, 1119, 1163, 1848
HpySE526I ACGT 2 cut(s) 116, 1021
HspAI GCGC 1 cut(s) 1260
Ksp22I TGATCA 3 cut(s) 22, 820, 877
KspAI GTTAAC 1 cut(s) 742
KspI CCGCGG 1 cut(s) 1815
Kzo9I GATC 8 cut(s) 22, 820, 877, 941, 1086, 1399, 1765, 1859
LmnI GCTCC 4 cut(s) 65, 394, 535, 994
Lsp1109I GCAGC 3 cut(s) 128, 281, 1146
LweI GCATC 3 cut(s) 710, 1329, 1892
MaeI CTAG 6 cut(s) 551, 993, 1347, 1511, 1934, 1973
MaeII ACGT 2 cut(s) 116, 1021
MaeIII GTNAC 7 cut(s) 683, 1002, 1284, 1375, 1774, 1894, 1995
MalI GATC 8 cut(s) 24, 822, 879, 943, 1088, 1401, 1767, 1861
MboI GATC 8 cut(s) 22, 820, 877, 941, 1086, 1399, 1765, 1859
MfeI CAATTG 1 cut(s) 1887
MflI RGATCY 3 cut(s) 941, 1399, 1765
MhlI GDGCHC 4 cut(s) 323, 955, 973, 991
MlsI TGGCCA 1 cut(s) 2120
MluNI TGGCCA 1 cut(s) 2120
MlyI GAGTC 3 cut(s) 1304, 1766, 1961
MmeI TCCRAC 6 cut(s) 254, 330, 1094, 1446, 1833, 1848
Mox20I TGGCCA 1 cut(s) 2120
MroXI GAANNNNTTC 2 cut(s) 201, 1801
MscI TGGCCA 1 cut(s) 2120
MseI TTAA 8 cut(s) 171, 420, 741, 828, 909, 1013, 1448, 1640
MslI CAYNNNNRTG 1 cut(s) 735
Msp20I TGGCCA 1 cut(s) 2120
MspA1I CMGCKG 2 cut(s) 1814, 1832
MspI CCGG 1 cut(s) 2007
MspR9I CCNGG 4 cut(s) 1029, 1210, 1472, 2008
MunI CAATTG 1 cut(s) 1887
Mva1269I GAATGC 2 cut(s) 432, 1514
MvaI CCWGG 3 cut(s) 1029, 1210, 1472
MvnI CGCG 2 cut(s) 1740, 1814
MwoI GCNNNNNNNGC 3 cut(s) 150, 551, 594
NciI CCSGG 1 cut(s) 2008
NcoI CCATGG 2 cut(s) 1395, 1761
NdeI CATATG 1 cut(s) 2092
NdeII GATC 8 cut(s) 22, 820, 877, 941, 1086, 1399, 1765, 1859
NheI GCTAGC 2 cut(s) 550, 1510
NlaIV GGNNCC 6 cut(s) 954, 972, 1201, 1401, 1489, 1767
NmuCI GTSAC 2 cut(s) 1002, 1894
NspI RCATGY 1 cut(s) 1945
OliI CACNNNNGTG 1 cut(s) 735
PaeR7I CTCGAG 1 cut(s) 862
PagI TCATGA 2 cut(s) 769, 1128
PctI GAATGC 2 cut(s) 432, 1514
PdmI GAANNNNTTC 2 cut(s) 201, 1801
PfeI GAWTC 3 cut(s) 491, 641, 1649
PflFI GACNNNGTC 1 cut(s) 467
PflMI CCANNNNNTGG 2 cut(s) 760, 1477
PkrI GCNGC 3 cut(s) 143, 296, 1161
PleI GAGTC 3 cut(s) 1303, 1765, 1961
PpsI GAGTC 3 cut(s) 1303, 1765, 1961
PpuMI RGGWCCY 1 cut(s) 1488
PshAI GACNNNNGTC 2 cut(s) 837, 1000
Psp124BI GAGCTC 1 cut(s) 991
Psp5II RGGWCCY 1 cut(s) 1488
Psp6I CCWGG 3 cut(s) 1027, 1208, 1470
PspEI GGTNACC 1 cut(s) 1894
PspFI CCCAGC 1 cut(s) 323
PspGI CCWGG 3 cut(s) 1027, 1208, 1470
PspN4I GGNNCC 6 cut(s) 954, 972, 1201, 1401, 1489, 1767
PspPI GGNCC 4 cut(s) 463, 1199, 1358, 1488
PspPPI RGGWCCY 1 cut(s) 1488
PstNI CAGNNNCTG 1 cut(s) 141
PsuI RGATCY 3 cut(s) 941, 1399, 1765
PsyI GACNNNGTC 1 cut(s) 467
PvuII CAGCTG 1 cut(s) 1832
RsaI GTAC 5 cut(s) 450, 1062, 1565, 1874, 2111
RsaNI GTAC 5 cut(s) 449, 1061, 1564, 1873, 2110
RseI CAYNNNNRTG 1 cut(s) 735
SacI GAGCTC 1 cut(s) 991
SacII CCGCGG 1 cut(s) 1815
SalI GTCGAC 1 cut(s) 576
SaqAI TTAA 8 cut(s) 171, 420, 741, 828, 909, 1013, 1448, 1640
SatI GCNGC 3 cut(s) 142, 295, 1160
Sau3AI GATC 8 cut(s) 22, 820, 877, 941, 1086, 1399, 1765, 1859
Sau96I GGNCC 4 cut(s) 463, 1199, 1358, 1488
SchI GAGTC 3 cut(s) 1304, 1766, 1961
ScrFI CCNGG 4 cut(s) 1029, 1210, 1472, 2008
SduI GDGCHC 4 cut(s) 323, 955, 973, 991
SfaNI GCATC 3 cut(s) 710, 1329, 1892
Sfr274I CTCGAG 1 cut(s) 862
Sfr303I CCGCGG 1 cut(s) 1815
SgrBI CCGCGG 1 cut(s) 1815
SinI GGWCC 2 cut(s) 463, 1488
SlaI CTCGAG 1 cut(s) 862
SmiMI CAYNNNNRTG 1 cut(s) 735
SmlI CTYRAG 4 cut(s) 862, 964, 1234, 1754
SmoI CTYRAG 4 cut(s) 862, 964, 1234, 1754
SpeI ACTAGT 1 cut(s) 1972
SsiI CCGC 3 cut(s) 1738, 1812, 1814
SspMI CTAG 6 cut(s) 551, 993, 1347, 1511, 1934, 1973
SstI GAGCTC 1 cut(s) 991
StyD4I CCNGG 4 cut(s) 1027, 1208, 1470, 2006
StyI CCWWGG 3 cut(s) 777, 1395, 1761
TaaI ACNGT 4 cut(s) 1751, 1788, 1838, 2077
TaiI ACGT 2 cut(s) 119, 1024
TaqI TCGA 2 cut(s) 577, 863
TatI WGTACW 2 cut(s) 448, 2109
TfiI GAWTC 3 cut(s) 491, 641, 1649
Tru1I TTAA 8 cut(s) 171, 420, 741, 828, 909, 1013, 1448, 1640
Tru9I TTAA 8 cut(s) 171, 420, 741, 828, 909, 1013, 1448, 1640
TscAI CASTG 6 cut(s) 194, 304, 1791, 1985, 2062, 2080
TseFI GTSAC 2 cut(s) 1002, 1894
TseI GCWGC 3 cut(s) 141, 294, 1159
Tsp45I GTSAC 2 cut(s) 1002, 1894
TspGWI ACGGA 6 cut(s) 325, 336, 684, 990, 1570, 1581
TspRI CASTG 6 cut(s) 194, 304, 1791, 1985, 2062, 2080
Tth111I GACNNNGTC 1 cut(s) 467
Van91I CCANNNNNTGG 2 cut(s) 760, 1477
VpaK11BI GGWCC 2 cut(s) 463, 1488
XapI RAATTY 1 cut(s) 911
XceI RCATGY 1 cut(s) 1945
XcmI CCANNNNNNNNNTGG 2 cut(s) 152, 605
XhoI CTCGAG 1 cut(s) 862
XmiI GTMKAC 1 cut(s) 577
XmnI GAANNNNTTC 2 cut(s) 201, 1801
XspI CTAG 6 cut(s) 551, 993, 1347, 1511, 1934, 1973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.