Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0008741

Physical Location & Seq

Genomic Coordinates Forward (+)

11870177 .. 11876849

Gene Structure 6673 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1125800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGAAGAAATACAATCACAATCGGATAATTATAGGTCTTCCTCGTCTTCAGCAAGTAGTCCAGCAAGTCGGGTACCCTCAAGTAACTTTTTCTACTTGCGCAAAACTGGCTCACTCAGACAACCCATCTCATTTGAGGATTCACCCGAATGGGAGGATACAGATATTGATGTTAGGGTGGAGGAAGGAGGTGACTCCATCAACATTGCAACCACTCCGGTCTCCGCATCTCTTTCGAAGCTTAATAGTGGGTCCTTGCCATCCCCACCATTACCAGAGGGTGCAAATGTAGTAAGAAAGATTGCAGGGGCTTCACTTGTGTGGAAAGATTTGACAGTTACAATTAAGGGGAAAAGAAAGTACTCTGAGAAGGTTATGAAGAGTTCAAATGGTTATGCTTTGCCAGGAACTATAACAGTAATTATGGGTCCTGCTAAGTCGGGGAAGTCGACGCTACTAAGGGCTCTTGCAGGAAGATTGCCTCACTCAGCCAGAATGTATGGTGAGGTTTTTGTGAATGGCTCAAAGTCGCCCATGCCATATGGTTCATACGGCTTTGTTGAGAGGGAAATCACTCTAATTGGATCCCTCACTGTTCGGGAGTTTCTGTATTACTCCGCTCTTCTTCAGCTTCCTGGTTTCTTTTGTCAGAAAAAGAGCGTAGTAGAGGATGCCATCCATGCCATGTCACTGGGTGATTGTGCAAACAAATTGATAGGCGGTTACTGTAATATGAAGGGCCTTCCAAATGGCGATAGAAGGCGTGTTAGCATCGCTCGAGAGCTTGTGATGAGGCCACATATTTTATTCATAGATGAGCCTCTTTACCATCTTGATAGTGTCTCCGCACTTCTGATGATGGTAACGCTGAAGAAACTTGCAAGTACAGGTTGCACCGTTGTATTTACCATTTACCAAAGCAGCACAGAAGTATTCGGCCTTTTTGATCGGATATGTCTTCTTTCAAATGGAAACACCTTGTTTTTTGGGGAAACCTTGGCTTGTTTGCAGCACTTCTCAAACGCTGGATTTCCTTGTCCGATTATGCAAAGTCCGTCAGATCACTTTTTACGGGCAATAAATACAGATTTTGACAAGATCATTGCAATGTGCAAAAATTGGCAGGATGACAACGGAGATTTTTCATCGGTGAACATGGATACTGCTGTGGCAATACGCACCCTCGAAGCAACTTATAAATCATCAGCAGATGCTGCTGCAGTTGAAACTATGATACTGAGACTCACAGATAAGGAAGGTCCGGTACTCAAAAGCAAGGGAAAGGCTGGAGCTGCTACACGGGTAGCAGTTTTAACTTGGAGATCATTATTAATAATGTCAAGGGATTGGAAATACTACTGGCTTCGTCTTATTCTTTATATGATTTTCACACTCTCCGTTGGTACAGTATTTTCTGGCTCGGGGCATTCGTTGTCTTCAGTTGCGACAAAAGTTGCAGCAATATTTGTATTTGTTTCGTTTACTGCACTACTAAGCATTTCTGGAGTACCTGCAGTAATAAAAGAAATCAAGATATATGCCAGTGAAGGATCGAACCACCATTTGGGGACACTAGTCTTTTTATTTGGACAGCTTCTCTCTAGCATCCCGTTCCTGTTTCTCATCTCCATCCCATCAAGTGTCGTCTTTTATTTCCTCATAGGACTGCGAGATGAGTTCAGCTTGTTGATGTACTTCATGCTGAATTTCTTCATGTGCCTCTTAGTAAATGATGGGATAATGCTGGTGGTGGTTTCTTTATGGCAAGATGTTTTCTGGAGCACCCTCACTCTGATATGCATACAAGTGGTAATGATGCTATCTGCGGGCTATTTCAGAATTCGAAATGCTTTGCCTGGACCCGTGTGGACATATCCAGTATCCTATATAGCTTTCCATACGTACTCTATACAGGGGCTGTTGGAGAATGAGTACATAGGGACATCCTTCGCGGTTGGGCAGGTAAGGACCATATCTGGGTATCAAGCACTTAGTAGCGCATATGACATCTCCCCAGACAACAATGCCAAGTGGGAAAATTTATTGATCTTGTTTCTAATGGCTGTCGGGTATCGTATTCTCGTCCTTGTTTTACTGTACTTTCGCGTAGGGGGAAAAAAGTATATACGTAAGATTTTGAAGTGTAATCAGGATACAAACAATGCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

724

Amino Acids

79.95

Weight (kDa)

8.93

Isoelectric Point (pI)

40.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	134 - 275	6.3e-16	ABC transporter
ABC2_membrane	PF01061	435 - 645	7.4e-28	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008741)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28070 AT2G28070
fragaria_vesca	FvH4_1g24480 FvH4_1g24480 FvH4_1g24480 FvH4_1g24480 FvH4_1g24480 FvH4_1g24480
malus_domestica	MD00G1165400.v1.1 MD03G1125800.v1.1
prunus_persica	Prupe.6G107900_v2.0.a1 Prupe.6G107900_v2.0.a1
pyrus_communis	pycom11g11830
rosa_chinensis	RchiOBHm_Chr5g0057821
rosa_laevigata	RLG00000035180
rosa_multiflora	Rmu_sc0010457.1_g000004
rosa_roxburghii	Rroxscaffold_1G00022680
rosa_rugosa	Rorug05G0309800
rosa_samantha	Rh5AG377900 Rh5BG389200 Rh5CG413500 Rh5DG404100
rosa_wichuraiana	Rw5G035660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1197
Acc16I	TGCGCA	1 cut(s)	101
Acc36I	ACCTGC	2 cut(s)	1519, 1951
Acc65I	GGTACC	1 cut(s)	73
AccB1I	GGYRCC	1 cut(s)	73
AccB7I	CCANNNNNTGG	1 cut(s)	1564
AccBSI	CCGCTC	1 cut(s)	620
AccI	GTMKAC	1 cut(s)	449
AccII	CGCG	2 cut(s)	1952, 2106
AciI	CCGC	6 cut(s)	225, 618, 720, 846, 1826, 1952
AclWI	GGATC	3 cut(s)	579, 592, 1558
AcsI	RAATTY	3 cut(s)	1705, 1839, 2038
AcuI	CTGAAG	4 cut(s)	33, 611, 890, 1422
AdeI	CACNNNGTG	1 cut(s)	695
AfiI	CCNNNNNNNGG	2 cut(s)	1564, 1977
AgsI	TTSAA	4 cut(s)	387, 966, 1226, 2140
AhlI	ACTAGT	1 cut(s)	1573
AjnI	CCWGG	3 cut(s)	403, 634, 1855
AjuI	GAANNNNNNNTTGG	2 cut(s)	1547, 1579
AleI	CACNNNNGTG	1 cut(s)	319
AluBI	AGCT	7 cut(s)	241, 631, 784, 1292, 1594, 1683, 1892
AluI	AGCT	7 cut(s)	241, 631, 784, 1292, 1594, 1683, 1892
Alw21I	GWGCWC	1 cut(s)	1784
Alw26I	GTCTC	3 cut(s)	226, 847, 1234
AlwI	GGATC	3 cut(s)	579, 592, 1558
AlwNI	CAGNNNCTG	2 cut(s)	1214, 1918
Ama87I	CYCGRG	2 cut(s)	777, 1420
AoxI	GGCC	3 cut(s)	739, 794, 937
ApeKI	GCWGC	6 cut(s)	921, 1009, 1214, 1217, 1292, 1457
ApoI	RAATTY	3 cut(s)	1705, 1839, 2038
AseI	ATTAAT	1 cut(s)	1331
Asp700I	GAANNNNTTC	1 cut(s)	1709
Asp718I	GGTACC	1 cut(s)	73
AspLEI	GCGC	2 cut(s)	102, 2000
AspS9I	GGNCC	6 cut(s)	252, 428, 739, 1259, 1859, 1968
AsuHPI	GGTGA	5 cut(s)	135, 203, 515, 707, 1162
AsuII	TTCGAA	2 cut(s)	236, 1843
AvaI	CYCGRG	2 cut(s)	777, 1420
AvaII	GGWCC	5 cut(s)	252, 428, 1259, 1859, 1968
BaeI	ACNNNNGTAYC	2 cut(s)	1152, 1185
BamHI	GGATCC	1 cut(s)	584
BanI	GGYRCC	1 cut(s)	73
BanII	GRGCYC	1 cut(s)	466
BarI	GAAGNNNNNNTAC	2 cut(s)	1248, 1280
BbsI	GAAGAC	4 cut(s)	30, 39, 950, 1428
Bbv12I	GWGCWC	1 cut(s)	1784
BbvI	GCAGC	6 cut(s)	933, 1021, 1201, 1204, 1279, 1469
BccI	CCATC	9 cut(s)	134, 206, 268, 683, 837, 853, 1637, 1642, 1727
BceAI	ACGGC	1 cut(s)	568
BcgI	CGANNNNNNTGC	2 cut(s)	216, 250
BciT130I	CCWGG	3 cut(s)	405, 636, 1857
BciVI	GTATCC	4 cut(s)	151, 1153, 1891, 2146
BcoDI	GTCTC	3 cut(s)	226, 847, 1234
BcuI	ACTAGT	1 cut(s)	1573
BfaI	CTAG	2 cut(s)	1574, 1602
BfmI	CTRYAG	2 cut(s)	1218, 1512
BfuAI	ACCTGC	2 cut(s)	1519, 1951
BfuI	GTATCC	4 cut(s)	151, 1153, 1891, 2146
BisI	GCNGC	6 cut(s)	922, 1010, 1215, 1218, 1293, 1458
BlsI	GCNGC	6 cut(s)	923, 1011, 1216, 1219, 1294, 1459
BmcAI	AGTACT	1 cut(s)	362
Bme1390I	CCNGG	3 cut(s)	405, 636, 1857
Bme18I	GGWCC	5 cut(s)	252, 428, 1259, 1859, 1968
BmeT110I	CYCGRG	2 cut(s)	777, 1420
BmgT120I	GGNCC	6 cut(s)	252, 428, 739, 1259, 1859, 1968
BmiI	GGNNCC	5 cut(s)	75, 253, 429, 586, 1861
BmrFI	CCNGG	3 cut(s)	405, 636, 1857
BmrI	ACTGGG	1 cut(s)	701
BmsI	GCATC	6 cut(s)	236, 661, 780, 1201, 1614, 1806
BmuI	ACTGGG	1 cut(s)	701
BoxI	GACNNNNGTC	1 cut(s)	1574
BpiI	GAAGAC	4 cut(s)	30, 39, 950, 1428
BpmI	CTGGAG	3 cut(s)	1308, 1524, 1798
Bpu14I	TTCGAA	2 cut(s)	236, 1843
BpuEI	CTTGAG	1 cut(s)	64
BsaAI	YACGTR	2 cut(s)	1902, 2129
BsaI	GGTCTC	1 cut(s)	226
BsaJI	CCNNGG	1 cut(s)	996
BsaWI	WCCGGW	2 cut(s)	217, 1261
BsaXI	ACNNNNNCTCC	4 cut(s)	593, 623, 1916, 1946
Bsc4I	CCNNNNNNNGG	2 cut(s)	1564, 1977
Bse1I	ACTGG	5 cut(s)	112, 696, 1364, 1542, 1877
Bse3DI	GCAATG	3 cut(s)	204, 1101, 1113
BseBI	CCWGG	3 cut(s)	405, 636, 1857
BseDI	CCNNGG	1 cut(s)	996
BseGI	GGATG	7 cut(s)	260, 675, 676, 1132, 1605, 1629, 1943
BseLI	CCNNNNNNNGG	2 cut(s)	1564, 1977
BseMI	GCAATG	3 cut(s)	204, 1101, 1113
BseMII	CTCAG	4 cut(s)	130, 357, 501, 1229
BseNI	ACTGG	5 cut(s)	112, 696, 1364, 1542, 1877
BseXI	GCAGC	6 cut(s)	933, 1021, 1201, 1204, 1279, 1469
BsgI	GTGCAG	1 cut(s)	1470
Bsh1236I	CGCG	2 cut(s)	1952, 2106
BshFI	GGCC	3 cut(s)	741, 796, 939
BshNI	GGYRCC	1 cut(s)	73
BsiHKAI	GWGCWC	1 cut(s)	1784
BsiHKCI	CYCGRG	2 cut(s)	777, 1420
BsiSI	CCGG	2 cut(s)	218, 1262
BslFI	GGGAC	2 cut(s)	1582, 1954
BslI	CCNNNNNNNGG	2 cut(s)	1564, 1977
BsmAI	GTCTC	3 cut(s)	226, 847, 1234
BsmFI	GGGAC	2 cut(s)	1582, 1954
BsmI	GAATGC	1 cut(s)	1426
BsnI	GGCC	3 cut(s)	741, 796, 939
Bso31I	GGTCTC	1 cut(s)	226
BsoBI	CYCGRG	2 cut(s)	777, 1420
Bsp119I	TTCGAA	2 cut(s)	236, 1843
Bsp1286I	GDGCHC	2 cut(s)	466, 1784
Bsp143I	GATC	7 cut(s)	584, 946, 1060, 1098, 1322, 1550, 2046
BspACI	CCGC	6 cut(s)	225, 618, 720, 846, 1826, 1952
BspANI	GGCC	3 cut(s)	741, 796, 939
BspCNI	CTCAG	4 cut(s)	129, 358, 500, 1230
BspFNI	CGCG	2 cut(s)	1952, 2106
BspLI	GGNNCC	5 cut(s)	75, 253, 429, 586, 1861
BspMAI	CTGCAG	2 cut(s)	1222, 1516
BspMI	ACCTGC	2 cut(s)	1519, 1951
BspPI	GGATC	3 cut(s)	579, 592, 1558
BspQI	GCTCTTC	1 cut(s)	627
BspT104I	TTCGAA	2 cut(s)	236, 1843
BspT107I	GGYRCC	1 cut(s)	73
BspTNI	GGTCTC	1 cut(s)	226
BsrBI	CCGCTC	1 cut(s)	620
BsrDI	GCAATG	3 cut(s)	204, 1101, 1113
BsrI	ACTGG	5 cut(s)	112, 696, 1364, 1542, 1877
BssECI	CCNNGG	1 cut(s)	996
BssMI	GATC	7 cut(s)	584, 946, 1060, 1098, 1322, 1550, 2046
BssT1I	CCWWGG	1 cut(s)	996
Bst2UI	CCWGG	3 cut(s)	405, 636, 1857
Bst4CI	ACNGT	7 cut(s)	337, 418, 595, 728, 898, 1408, 2097
Bst6I	CTCTTC	2 cut(s)	374, 627
BstAPI	GCANNNNNTGC	1 cut(s)	1214
BstBAI	YACGTR	2 cut(s)	1902, 2129
BstBI	TTCGAA	2 cut(s)	236, 1843
BstC8I	GCNNGC	1 cut(s)	1828
BstDEI	CTNAG	9 cut(s)	116, 366, 435, 458, 487, 1238, 1493, 1723, 1991
BstF5I	GGATG	7 cut(s)	260, 675, 676, 1132, 1605, 1629, 1943
BstFNI	CGCG	2 cut(s)	1952, 2106
BstHHI	GCGC	2 cut(s)	102, 2000
BstKTI	GATC	7 cut(s)	587, 949, 1063, 1101, 1325, 1553, 2049
BstMAI	GTCTC	3 cut(s)	226, 847, 1234
BstMBI	GATC	7 cut(s)	584, 946, 1060, 1098, 1322, 1550, 2046
BstMWI	GCNNNNNNNGC	4 cut(s)	108, 680, 1214, 1292
BstNI	CCWGG	3 cut(s)	405, 636, 1857
BstPAI	GACNNNNGTC	1 cut(s)	1574
BstSCI	CCNGG	3 cut(s)	403, 634, 1855
BstSFI	CTRYAG	2 cut(s)	1218, 1512
BstSNI	TACGTA	2 cut(s)	1902, 2129
BstUI	CGCG	2 cut(s)	1952, 2106
BstV1I	GCAGC	6 cut(s)	933, 1021, 1201, 1204, 1279, 1469
BstV2I	GAAGAC	4 cut(s)	30, 39, 950, 1428
BstX2I	RGATCY	1 cut(s)	584
BstXI	CCANNNNNNTGG	1 cut(s)	691
BstYI	RGATCY	1 cut(s)	584
BsuI	GTATCC	4 cut(s)	151, 1153, 1891, 2146
BsuRI	GGCC	3 cut(s)	741, 796, 939
BtgZI	GCGATG	1 cut(s)	757
BtsCI	GGATG	7 cut(s)	260, 675, 676, 1132, 1605, 1629, 1943
BtsIMutI	CAGTG	3 cut(s)	591, 689, 1549
BveI	ACCTGC	2 cut(s)	1519, 1951
Cac8I	GCNNGC	1 cut(s)	1828
CaiI	CAGNNNCTG	2 cut(s)	1214, 1918
CfoI	GCGC	2 cut(s)	102, 2000
Cfr13I	GGNCC	6 cut(s)	252, 428, 739, 1259, 1859, 1968
CseI	GACGC	1 cut(s)	460
CviAII	CATG	6 cut(s)	535, 680, 685, 1156, 1699, 1714
DdeI	CTNAG	9 cut(s)	116, 366, 435, 458, 487, 1238, 1493, 1723, 1991
DpnI	GATC	7 cut(s)	586, 948, 1062, 1100, 1324, 1552, 2048
DpnII	GATC	7 cut(s)	584, 946, 1060, 1098, 1322, 1550, 2046
DraIII	CACNNNGTG	1 cut(s)	695
Eam1104I	CTCTTC	2 cut(s)	374, 627
EarI	CTCTTC	2 cut(s)	374, 627
Eco105I	TACGTA	2 cut(s)	1902, 2129
Eco130I	CCWWGG	1 cut(s)	996
Eco24I	GRGCYC	1 cut(s)	466
Eco31I	GGTCTC	1 cut(s)	226
Eco47I	GGWCC	5 cut(s)	252, 428, 1259, 1859, 1968
Eco57I	CTGAAG	4 cut(s)	33, 611, 890, 1422
Eco88I	CYCGRG	2 cut(s)	777, 1420
EcoO109I	RGGNCCY	3 cut(s)	252, 428, 739
EcoRI	GAATTC	1 cut(s)	1839
EcoRII	CCWGG	3 cut(s)	403, 634, 1855
EcoT14I	CCWWGG	1 cut(s)	996
EcoT22I	ATGCAT	1 cut(s)	1802
EcoT38I	GRGCYC	1 cut(s)	466
ErhI	CCWWGG	1 cut(s)	996
FaeI	CATG	6 cut(s)	538, 683, 688, 1159, 1702, 1717
FaqI	GGGAC	2 cut(s)	1582, 1954
FatI	CATG	6 cut(s)	534, 679, 684, 1155, 1698, 1713
FauI	CCCGC	1 cut(s)	1819
FauNDI	CATATG	2 cut(s)	541, 2002
FblI	GTMKAC	1 cut(s)	449
Fnu4HI	GCNGC	6 cut(s)	922, 1010, 1215, 1218, 1293, 1458
FokI	GGATG	7 cut(s)	247, 662, 683, 1139, 1592, 1616, 1930
FriOI	GRGCYC	1 cut(s)	466
Fsp4HI	GCNGC	6 cut(s)	922, 1010, 1215, 1218, 1293, 1458
FspBI	CTAG	2 cut(s)	1574, 1602
FspI	TGCGCA	1 cut(s)	101
GlaI	GCGC	2 cut(s)	101, 1999
GluI	GCNGC	6 cut(s)	922, 1010, 1215, 1218, 1293, 1458
GsuI	CTGGAG	3 cut(s)	1308, 1524, 1798
HaeIII	GGCC	3 cut(s)	741, 796, 939
HapII	CCGG	2 cut(s)	218, 1262
HgaI	GACGC	1 cut(s)	460
HhaI	GCGC	2 cut(s)	102, 2000
Hin1II	CATG	6 cut(s)	538, 683, 688, 1159, 1702, 1717
Hin6I	GCGC	2 cut(s)	100, 1998
HinP1I	GCGC	2 cut(s)	100, 1998
HincII	GTYRAC	1 cut(s)	450
HindII	GTYRAC	1 cut(s)	450
HindIII	AAGCTT	1 cut(s)	239
HinfI	GANTC	3 cut(s)	140, 194, 1242
HpaII	CCGG	2 cut(s)	218, 1262
HphI	GGTGA	5 cut(s)	135, 203, 515, 707, 1162
Hpy166II	GTNNAC	4 cut(s)	450, 1153, 1482, 1869
Hpy188III	TCNNGA	7 cut(s)	599, 779, 833, 1503, 1531, 1777, 2150
Hpy8I	GTNNAC	4 cut(s)	450, 1153, 1482, 1869
Hpy99I	CGWCG	1 cut(s)	454
HpyAV	CCTTC	8 cut(s)	179, 364, 730, 752, 753, 1250, 1541, 1957
HpyCH4III	ACNGT	7 cut(s)	337, 418, 595, 728, 898, 1408, 2097
HpyCH4IV	ACGT	2 cut(s)	1901, 2128
HpyF10VI	GCNNNNNNNGC	4 cut(s)	108, 680, 1214, 1292
HpyF3I	CTNAG	9 cut(s)	116, 366, 435, 458, 487, 1238, 1493, 1723, 1991
HpySE526I	ACGT	2 cut(s)	1901, 2128
Hsp92II	CATG	6 cut(s)	538, 683, 688, 1159, 1702, 1717
HspAI	GCGC	2 cut(s)	100, 1998
KpnI	GGTACC	1 cut(s)	77
Kzo9I	GATC	7 cut(s)	584, 946, 1060, 1098, 1322, 1550, 2046
LguI	GCTCTTC	1 cut(s)	627
LmnI	GCTCC	2 cut(s)	1289, 1779
Lsp1109I	GCAGC	6 cut(s)	933, 1021, 1201, 1204, 1279, 1469
LweI	GCATC	6 cut(s)	236, 661, 780, 1201, 1614, 1806
MaeI	CTAG	2 cut(s)	1574, 1602
MaeII	ACGT	2 cut(s)	1901, 2128
MaeIII	GTNAC	6 cut(s)	83, 191, 337, 687, 722, 862
MalI	GATC	7 cut(s)	586, 948, 1062, 1100, 1324, 1552, 2048
MbiI	CCGCTC	1 cut(s)	620
MboI	GATC	7 cut(s)	584, 946, 1060, 1098, 1322, 1550, 2046
MflI	RGATCY	1 cut(s)	584
MhlI	GDGCHC	2 cut(s)	466, 1784
MluCI	AATT	9 cut(s)	28, 342, 420, 579, 710, 1117, 1705, 1839, 2038
MlyI	GAGTC	2 cut(s)	188, 1236
MmeI	TCCRAC	1 cut(s)	1902
Mph1103I	ATGCAT	1 cut(s)	1802
MroXI	GAANNNNTTC	1 cut(s)	1709
MseI	TTAA	4 cut(s)	243, 345, 1313, 1331
MslI	CAYNNNNRTG	4 cut(s)	148, 319, 1106, 1805
MspI	CCGG	2 cut(s)	218, 1262
MspR9I	CCNGG	3 cut(s)	405, 636, 1857
Mva1269I	GAATGC	1 cut(s)	1426
MvaI	CCWGG	3 cut(s)	405, 636, 1857
MvnI	CGCG	2 cut(s)	1952, 2106
MwoI	GCNNNNNNNGC	4 cut(s)	108, 680, 1214, 1292
NdeI	CATATG	2 cut(s)	541, 2002
NdeII	GATC	7 cut(s)	584, 946, 1060, 1098, 1322, 1550, 2046
NlaIII	CATG	6 cut(s)	538, 683, 688, 1159, 1702, 1717
NlaIV	GGNNCC	5 cut(s)	75, 253, 429, 586, 1861
NmuCI	GTSAC	2 cut(s)	191, 687
NsbI	TGCGCA	1 cut(s)	101
NsiI	ATGCAT	1 cut(s)	1802
NspV	TTCGAA	2 cut(s)	236, 1843
OliI	CACNNNNGTG	1 cut(s)	319
PaeR7I	CTCGAG	1 cut(s)	777
PciSI	GCTCTTC	1 cut(s)	627
PcsI	WCGNNNNNNNCGW	2 cut(s)	446, 1427
PctI	GAATGC	1 cut(s)	1426
PdmI	GAANNNNTTC	1 cut(s)	1709
PfeI	GAWTC	1 cut(s)	140
PflMI	CCANNNNNTGG	1 cut(s)	1564
PkrI	GCNGC	6 cut(s)	923, 1011, 1216, 1219, 1294, 1459
PleI	GAGTC	2 cut(s)	188, 1236
PpsI	GAGTC	2 cut(s)	188, 1236
Ppu21I	YACGTR	2 cut(s)	1902, 2129
PpuMI	RGGWCCY	2 cut(s)	252, 428
PshAI	GACNNNNGTC	1 cut(s)	1574
PshBI	ATTAAT	1 cut(s)	1331
PsiI	TTATAA	1 cut(s)	1197
Psp5II	RGGWCCY	2 cut(s)	252, 428
Psp6I	CCWGG	3 cut(s)	403, 634, 1855
PspGI	CCWGG	3 cut(s)	403, 634, 1855
PspN4I	GGNNCC	5 cut(s)	75, 253, 429, 586, 1861
PspPI	GGNCC	6 cut(s)	252, 428, 739, 1259, 1859, 1968
PspPPI	RGGWCCY	2 cut(s)	252, 428
PstI	CTGCAG	2 cut(s)	1222, 1516
PstNI	CAGNNNCTG	2 cut(s)	1214, 1918
PsuI	RGATCY	1 cut(s)	584
RseI	CAYNNNNRTG	4 cut(s)	148, 319, 1106, 1805
SalI	GTCGAC	1 cut(s)	448
SapI	GCTCTTC	1 cut(s)	627
SaqAI	TTAA	4 cut(s)	243, 345, 1313, 1331
SatI	GCNGC	6 cut(s)	922, 1010, 1215, 1218, 1293, 1458
Sau3AI	GATC	7 cut(s)	584, 946, 1060, 1098, 1322, 1550, 2046
Sau96I	GGNCC	6 cut(s)	252, 428, 739, 1259, 1859, 1968
ScaI	AGTACT	1 cut(s)	362
SchI	GAGTC	2 cut(s)	188, 1236
ScrFI	CCNGG	3 cut(s)	405, 636, 1857
SduI	GDGCHC	2 cut(s)	466, 1784
SfaNI	GCATC	6 cut(s)	236, 661, 780, 1201, 1614, 1806
SfcI	CTRYAG	2 cut(s)	1218, 1512
Sfr274I	CTCGAG	1 cut(s)	777
SfuI	TTCGAA	2 cut(s)	236, 1843
SinI	GGWCC	5 cut(s)	252, 428, 1259, 1859, 1968
SlaI	CTCGAG	1 cut(s)	777
SmiMI	CAYNNNNRTG	4 cut(s)	148, 319, 1106, 1805
SmlI	CTYRAG	2 cut(s)	79, 777
SmoI	CTYRAG	2 cut(s)	79, 777
SnaBI	TACGTA	2 cut(s)	1902, 2129
SpeI	ACTAGT	1 cut(s)	1573
Sse9I	AATT	9 cut(s)	28, 342, 420, 579, 710, 1117, 1705, 1839, 2038
SsiI	CCGC	6 cut(s)	225, 618, 720, 846, 1826, 1952
SspI	AATATT	1 cut(s)	1464
SspMI	CTAG	2 cut(s)	1574, 1602
StyD4I	CCNGG	3 cut(s)	403, 634, 1855
StyI	CCWWGG	1 cut(s)	996
TaaI	ACNGT	7 cut(s)	337, 418, 595, 728, 898, 1408, 2097
TaiI	ACGT	2 cut(s)	1904, 2131
TaqI	TCGA	6 cut(s)	236, 449, 778, 1185, 1553, 1843
TasI	AATT	9 cut(s)	28, 342, 420, 579, 710, 1117, 1705, 1839, 2038
TatI	WGTACW	5 cut(s)	360, 884, 1692, 1932, 2097
TfiI	GAWTC	1 cut(s)	140
Tru1I	TTAA	4 cut(s)	243, 345, 1313, 1331
Tru9I	TTAA	4 cut(s)	243, 345, 1313, 1331
TscAI	CASTG	3 cut(s)	598, 696, 1549
TseFI	GTSAC	2 cut(s)	191, 687
TseI	GCWGC	6 cut(s)	921, 1009, 1214, 1217, 1292, 1457
Tsp45I	GTSAC	2 cut(s)	191, 687
TspDTI	ATGAA	7 cut(s)	392, 537, 749, 799, 1134, 1687, 1702
TspGWI	ACGGA	3 cut(s)	1044, 1149, 1387
TspRI	CASTG	3 cut(s)	598, 696, 1549
Van91I	CCANNNNNTGG	1 cut(s)	1564
VpaK11BI	GGWCC	5 cut(s)	252, 428, 1259, 1859, 1968
VspI	ATTAAT	1 cut(s)	1331
XapI	RAATTY	3 cut(s)	1705, 1839, 2038
XhoI	CTCGAG	1 cut(s)	777
XmiI	GTMKAC	1 cut(s)	449
XmnI	GAANNNNTTC	1 cut(s)	1709
XspI	CTAG	2 cut(s)	1574, 1602
ZrmI	AGTACT	1 cut(s)	362
Zsp2I	ATGCAT	1 cut(s)	1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.