Rh5BG389200

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
62284204 .. 62293848
9645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG389200.1

Sequence Viewer

Length: 1767 bp
ATGGTTCATATCATGTTTGCTTTGCAAATCGATTCATCATTATCAAATGAAGCCCAATCGTTTGATACATTGTGTGTGTGTCATCATTCTTCCACTTATTGCTTTTCTGTGGTTTCTATCACCCACTCGATTGTGCTTACTTGTGAGGGTTTTGTTAAGAGGGAAATCAATTTAATTGGATCTCTCACTGTTCGGGAGTTTCTGTATTATTCGGCACTCCTTCAGCTTCCTGGTTTCTTTTGTCAGAAAAAGAGTGTAGTAGAGGACGCTATTCATGCCATGTCACTGGGTGATTATGCAAACAGATTGATAGGTGGCCACTGTTATATGAAAGGCCTTCCTAATGGAGAGAGAAGGCGCGTTAGCATTGCCCGAGAGCTTGTGATGAGGCCTCATGTTTTATTCATTGATGAGCCTCTTTATCACCTTGATAGTGTCTCTGCACTTCTGATGATGGTTACATTGAAGAAGCTTGCAAGTACAGGTTGTACTCTTATATTTACCATTTACCAAAGCAGCACAGAAGTGTTTGGCCTATTTGACAGGATTTGTCTGCTTTCTAATGGAAATACCCTTTTCTTTGGAGAAACATTGTCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCTTGTCCGATTATGCAAAGTCCTTCCGATCACTTTCTGCGTGCAATAAATACAGATTTTGATAGGATCATTGCAATGTGCAAGAACTGGCAGGATGACAATGGGGACTTCTCATCCGTAAACATGGACACGGCTGTGGCAATACGCACCCTTGAAGCAACTTATAGATCATCAGCTGATGCTGCTGCTGTTGAAAATATGATACTAAGACTCACAGAGAAGGAAGGTCCATTACTTAAAAGCAAGGGAAAAGCTGGCAGTGCTACACGGATAGCAGTCTTAACTTGGAGATCGTTATTGATAATGTCAAGGGAATGGAAATACTACTGGCTTCGACTTATTCTTTATATCATTTTTACGCTCTCTGTTGGTACAGCATTTTCTGGCTTAGGGCATTCTTTGTCTTCAGTTGTGACCAGAGTTGCAGCCATATTTGTGTTTGTTTCATTTACTGCACTACTGAGCATTGCTGGAGTACCTGCAATTATGAAAGAAGTCAAGACATATGCGAGTGAAGAATCAAATCAGCACTTGGGGGCACTAGTCTTTTTAGTTGGGCAGCTTCTCTCTAGTATCCCATTCCTGTTTCTGATCTCTATTTCATCAAGTCTCGTCTTCTACTTCCTTATAGGATTGCGTGATGAGTTCAGCTTGTTGATGTACTTCGTGCTAAATTTCTTCATGTGCCTCTTAGTAAATGAAGGATTGATGCTAGTTGTTGTTTCGTTATGGCAAGATGTTTATTGGAGCACCCTGACTCTACTATCTGTACAAGTGATAATGATGCTATCTGCGGGTTATTTCAGAATTCGAAATGCTTTGCCCAAACCAGTGTGGACATATCCAATATCCTATATTGCTTTCCACACCTACTCTATACAGGGGCTGTTGGAGAATGAGTACCTTGGGACTTCCTTTGCAGTTGGGCAGGTACGGACCATCTCTGGGTATCAAGCGATTCGAAGTGCATACGACATCTCTATGGACAGTAATTCCAAGTGGGAAAATTTATTGGTCTTGTTTCTAATGGCAGTTGGGTATCGTATTCTCGTCTTTGGTTTGCTGTATTTTCGAGTTGGGAAAAAGGAGTTCCTGTATAAGATTTTCAAGTGTAATCGGGATACAAACAATGCGAGATGA

Protein Analysis

588

Amino Acids

66.24

Weight (kDa)

8.31

Isoelectric Point (pI)

32.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 50 - 140 7.1e-08 ABC transporter
ABC2_membrane PF01061 300 - 510 1.5e-28 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1114, 1546
AccII CGCG 1 cut(s) 360
AciI CCGC 1 cut(s) 1421
AclWI GGATC 2 cut(s) 187, 701
AcoI YGGCCR 1 cut(s) 316
AcsI RAATTY 3 cut(s) 1300, 1434, 1633
AcuI CTGAAG 2 cut(s) 206, 1017
AdeI CACNNNGTG 1 cut(s) 290
AfaI GTAC 8 cut(s) 481, 490, 1000, 1104, 1289, 1398, 1529, 1560
AfiI CCNNNNNNNGG 1 cut(s) 1572
AgsI TTSAA 4 cut(s) 466, 782, 821, 1735
AhlI ACTAGT 1 cut(s) 1168
AjnI CCWGG 1 cut(s) 229
AleI CACNNNNGTG 2 cut(s) 524, 761
AluBI AGCT 7 cut(s) 226, 379, 472, 803, 881, 1189, 1278
AluI AGCT 7 cut(s) 226, 379, 472, 803, 881, 1189, 1278
Alw21I GWGCWC 1 cut(s) 1379
Alw26I GTCTC 2 cut(s) 442, 1241
AlwI GGATC 2 cut(s) 187, 701
AlwNI CAGNNNCTG 1 cut(s) 1513
Ama87I CYCGRG 1 cut(s) 372
AoxI GGCC 4 cut(s) 316, 334, 389, 532
ApeKI GCWGC 6 cut(s) 516, 604, 809, 812, 1052, 1186
ApoI RAATTY 3 cut(s) 1300, 1434, 1633
AspLEI GCGC 1 cut(s) 360
AspS9I GGNCC 2 cut(s) 854, 1563
AsuHPI GGTGA 3 cut(s) 112, 302, 416
AsuII TTCGAA 2 cut(s) 1438, 1588
AvaI CYCGRG 1 cut(s) 372
AvaII GGWCC 2 cut(s) 854, 1563
BaeGI GKGCMC 1 cut(s) 1168
BalI TGGCCA 1 cut(s) 318
BarI GAAGNNNNNNTAC 2 cut(s) 843, 875
BbsI GAAGAC 2 cut(s) 1023, 1234
Bbv12I GWGCWC 1 cut(s) 1379
BbvI GCAGC 6 cut(s) 528, 616, 796, 799, 1064, 1198
BccI CCATC 2 cut(s) 448, 1574
BceAI ACGGC 1 cut(s) 774
BciT130I CCWGG 1 cut(s) 231
BciVI GTATCC 2 cut(s) 1211, 1741
BcoDI GTCTC 2 cut(s) 442, 1241
BcuI ACTAGT 1 cut(s) 1168
BfaI CTAG 3 cut(s) 1169, 1197, 1340
BfuAI ACCTGC 2 cut(s) 1114, 1546
BfuI GTATCC 2 cut(s) 1211, 1741
BisI GCNGC 6 cut(s) 517, 605, 810, 813, 1053, 1187
BlsI GCNGC 6 cut(s) 518, 606, 811, 814, 1054, 1188
Bme1390I CCNGG 1 cut(s) 231
Bme18I GGWCC 2 cut(s) 854, 1563
BmeT110I CYCGRG 1 cut(s) 372
BmgT120I GGNCC 2 cut(s) 854, 1563
BmrFI CCNGG 1 cut(s) 231
BmrI ACTGGG 1 cut(s) 296
BmsI GCATC 3 cut(s) 796, 1326, 1401
BmuI ACTGGG 1 cut(s) 296
BpiI GAAGAC 2 cut(s) 1023, 1234
BpmI CTGGAG 1 cut(s) 1119
Bpu10I CCTNAGC 1 cut(s) 1015
Bpu14I TTCGAA 2 cut(s) 1438, 1588
Bsa29I ATCGAT 1 cut(s) 30
BsaJI CCNNGG 1 cut(s) 1531
BsaXI ACNNNNNCTCC 6 cut(s) 188, 218, 1511, 1541, 1706, 1736
Bsc4I CCNNNNNNNGG 1 cut(s) 1572
Bse1I ACTGG 4 cut(s) 291, 719, 959, 1457
Bse3DI GCAATG 4 cut(s) 366, 696, 708, 1092
BseBI CCWGG 1 cut(s) 231
BseCI ATCGAT 1 cut(s) 30
BseDI CCNNGG 1 cut(s) 1531
BseGI GGATG 2 cut(s) 727, 740
BseLI CCNNNNNNNGG 1 cut(s) 1572
BseMI GCAATG 4 cut(s) 366, 696, 708, 1092
BseMII CTCAG 1 cut(s) 1079
BseNI ACTGG 4 cut(s) 291, 719, 959, 1457
BseSI GKGCMC 1 cut(s) 1168
BseXI GCAGC 6 cut(s) 528, 616, 796, 799, 1064, 1198
BsgI GTGCAG 2 cut(s) 426, 1065
Bsh1236I CGCG 1 cut(s) 360
BshFI GGCC 4 cut(s) 318, 336, 391, 534
BshVI ATCGAT 1 cut(s) 30
BsiHKAI GWGCWC 1 cut(s) 1379
BsiHKCI CYCGRG 1 cut(s) 372
BslFI GGGAC 2 cut(s) 746, 1549
BslI CCNNNNNNNGG 1 cut(s) 1572
BsmAI GTCTC 2 cut(s) 442, 1241
BsmFI GGGAC 2 cut(s) 746, 1549
BsmI GAATGC 1 cut(s) 1021
BsnI GGCC 4 cut(s) 318, 336, 391, 534
BsoBI CYCGRG 1 cut(s) 372
Bsp119I TTCGAA 2 cut(s) 1438, 1588
Bsp1286I GDGCHC 2 cut(s) 1168, 1379
Bsp1407I TGTACA 1 cut(s) 1396
Bsp143I GATC 6 cut(s) 179, 655, 693, 794, 917, 1218
BspACI CCGC 1 cut(s) 1421
BspANI GGCC 4 cut(s) 318, 336, 391, 534
BspCNI CTCAG 1 cut(s) 1080
BspDI ATCGAT 1 cut(s) 30
BspFNI CGCG 1 cut(s) 360
BspMI ACCTGC 2 cut(s) 1114, 1546
BspPI GGATC 2 cut(s) 187, 701
BspT104I TTCGAA 2 cut(s) 1438, 1588
BsrDI GCAATG 4 cut(s) 366, 696, 708, 1092
BsrGI TGTACA 1 cut(s) 1396
BsrI ACTGG 4 cut(s) 291, 719, 959, 1457
BssECI CCNNGG 1 cut(s) 1531
BssMI GATC 6 cut(s) 179, 655, 693, 794, 917, 1218
BssT1I CCWWGG 1 cut(s) 1531
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 3 cut(s) 190, 323, 1616
BstAUI TGTACA 1 cut(s) 1396
BstBI TTCGAA 2 cut(s) 1438, 1588
BstC8I GCNNGC 4 cut(s) 474, 602, 669, 883
BstDEI CTNAG 4 cut(s) 833, 1015, 1088, 1318
BstF5I GGATG 2 cut(s) 727, 740
BstFNI CGCG 1 cut(s) 360
BstHHI GCGC 1 cut(s) 360
BstKTI GATC 6 cut(s) 182, 658, 696, 797, 920, 1221
BstMAI GTCTC 2 cut(s) 442, 1241
BstMBI GATC 6 cut(s) 179, 655, 693, 794, 917, 1218
BstMWI GCNNNNNNNGC 3 cut(s) 275, 809, 887
BstNI CCWGG 1 cut(s) 231
BstSCI CCNGG 1 cut(s) 229
BstSLI GKGCMC 1 cut(s) 1168
BstUI CGCG 1 cut(s) 360
BstV1I GCAGC 6 cut(s) 528, 616, 796, 799, 1064, 1198
BstV2I GAAGAC 2 cut(s) 1023, 1234
BstX2I RGATCY 1 cut(s) 179
BstXI CCANNNNNNTGG 1 cut(s) 286
BstYI RGATCY 1 cut(s) 179
Bsu15I ATCGAT 1 cut(s) 30
BsuI GTATCC 2 cut(s) 1211, 1741
BsuRI GGCC 4 cut(s) 318, 336, 391, 534
BsuTUI ATCGAT 1 cut(s) 30
BtsCI GGATG 2 cut(s) 727, 740
BtsI GCAGTG 1 cut(s) 892
BtsIMutI CAGTG 5 cut(s) 186, 284, 319, 892, 1464
BveI ACCTGC 2 cut(s) 1114, 1546
Cac8I GCNNGC 4 cut(s) 474, 602, 669, 883
CaiI CAGNNNCTG 1 cut(s) 1513
CfoI GCGC 1 cut(s) 360
Cfr13I GGNCC 2 cut(s) 854, 1563
ClaI ATCGAT 1 cut(s) 30
CseI GACGC 1 cut(s) 275
Csp6I GTAC 8 cut(s) 480, 489, 999, 1103, 1288, 1397, 1528, 1559
CviAII CATG 6 cut(s) 13, 275, 280, 395, 751, 1309
CviQI GTAC 8 cut(s) 480, 489, 999, 1103, 1288, 1397, 1528, 1559
DdeI CTNAG 4 cut(s) 833, 1015, 1088, 1318
DpnI GATC 6 cut(s) 181, 657, 695, 796, 919, 1220
DpnII GATC 6 cut(s) 179, 655, 693, 794, 917, 1218
DraIII CACNNNGTG 1 cut(s) 290
EaeI YGGCCR 1 cut(s) 316
Eco130I CCWWGG 1 cut(s) 1531
Eco147I AGGCCT 2 cut(s) 336, 391
Eco47I GGWCC 2 cut(s) 854, 1563
Eco57I CTGAAG 2 cut(s) 206, 1017
Eco88I CYCGRG 1 cut(s) 372
EcoRI GAATTC 1 cut(s) 1434
EcoRII CCWGG 1 cut(s) 229
EcoT14I CCWWGG 1 cut(s) 1531
ErhI CCWWGG 1 cut(s) 1531
FaeI CATG 6 cut(s) 16, 278, 283, 398, 754, 1312
FaqI GGGAC 2 cut(s) 746, 1549
FatI CATG 6 cut(s) 12, 274, 279, 394, 750, 1308
FauI CCCGC 1 cut(s) 1414
FauNDI CATATG 1 cut(s) 1132
Fnu4HI GCNGC 6 cut(s) 517, 605, 810, 813, 1053, 1187
FokI GGATG 2 cut(s) 727, 734
Fsp4HI GCNGC 6 cut(s) 517, 605, 810, 813, 1053, 1187
FspBI CTAG 3 cut(s) 1169, 1197, 1340
GlaI GCGC 1 cut(s) 359
GluI GCNGC 6 cut(s) 517, 605, 810, 813, 1053, 1187
GsuI CTGGAG 1 cut(s) 1119
HaeIII GGCC 4 cut(s) 318, 336, 391, 534
HgaI GACGC 1 cut(s) 275
HhaI GCGC 1 cut(s) 360
Hin1II CATG 6 cut(s) 16, 278, 283, 398, 754, 1312
Hin6I GCGC 1 cut(s) 358
HinP1I GCGC 1 cut(s) 358
HindIII AAGCTT 1 cut(s) 470
HinfI GANTC 5 cut(s) 32, 837, 1145, 1384, 1585
HphI GGTGA 3 cut(s) 112, 302, 416
Hpy166II GTNNAC 2 cut(s) 748, 1464
Hpy188I TCNGA 6 cut(s) 246, 450, 636, 655, 1218, 1433
Hpy188III TCNNGA 3 cut(s) 194, 1126, 1745
Hpy8I GTNNAC 2 cut(s) 748, 1464
HpyAV CCTTC 7 cut(s) 230, 347, 348, 660, 841, 845, 1322
HpyCH4III ACNGT 3 cut(s) 190, 323, 1616
HpyF10VI GCNNNNNNNGC 3 cut(s) 275, 809, 887
HpyF3I CTNAG 4 cut(s) 833, 1015, 1088, 1318
Hsp92II CATG 6 cut(s) 16, 278, 283, 398, 754, 1312
HspAI GCGC 1 cut(s) 358
Kzo9I GATC 6 cut(s) 179, 655, 693, 794, 917, 1218
LmnI GCTCC 1 cut(s) 1374
Lsp1109I GCAGC 6 cut(s) 528, 616, 796, 799, 1064, 1198
LweI GCATC 3 cut(s) 796, 1326, 1401
MaeI CTAG 3 cut(s) 1169, 1197, 1340
MaeIII GTNAC 3 cut(s) 282, 457, 1039
MalI GATC 6 cut(s) 181, 657, 695, 796, 919, 1220
MboI GATC 6 cut(s) 179, 655, 693, 794, 917, 1218
MboII GAAGA 6 cut(s) 81, 478, 1023, 1154, 1234, 1297
MflI RGATCY 1 cut(s) 179
MhlI GDGCHC 2 cut(s) 1168, 1379
MlsI TGGCCA 1 cut(s) 318
MluCI AATT 7 cut(s) 169, 174, 1110, 1300, 1434, 1618, 1633
MluNI TGGCCA 1 cut(s) 318
MlyI GAGTC 2 cut(s) 831, 1378
MmeI TCCRAC 1 cut(s) 1497
MnlI CCTC 7 cut(s) 139, 153, 256, 381, 402, 426, 1325
Mox20I TGGCCA 1 cut(s) 318
MscI TGGCCA 1 cut(s) 318
MseI TTAA 4 cut(s) 156, 173, 864, 908
MslI CAYNNNNRTG 5 cut(s) 524, 701, 761, 1061, 1607
Msp20I TGGCCA 1 cut(s) 318
MspA1I CMGCKG 1 cut(s) 803
MspR9I CCNGG 1 cut(s) 231
Mva1269I GAATGC 1 cut(s) 1021
MvaI CCWGG 1 cut(s) 231
MvnI CGCG 1 cut(s) 360
MwoI GCNNNNNNNGC 3 cut(s) 275, 809, 887
NdeI CATATG 1 cut(s) 1132
NdeII GATC 6 cut(s) 179, 655, 693, 794, 917, 1218
NlaIII CATG 6 cut(s) 16, 278, 283, 398, 754, 1312
NmuCI GTSAC 2 cut(s) 282, 1039
NspV TTCGAA 2 cut(s) 1438, 1588
OliI CACNNNNGTG 2 cut(s) 524, 761
PceI AGGCCT 2 cut(s) 336, 391
PctI GAATGC 1 cut(s) 1021
PfeI GAWTC 3 cut(s) 32, 1145, 1585
PkrI GCNGC 6 cut(s) 518, 606, 811, 814, 1054, 1188
PleI GAGTC 2 cut(s) 831, 1378
PpsI GAGTC 2 cut(s) 831, 1378
Psp6I CCWGG 1 cut(s) 229
PspGI CCWGG 1 cut(s) 229
PspPI GGNCC 2 cut(s) 854, 1563
PstNI CAGNNNCTG 1 cut(s) 1513
PsuI RGATCY 1 cut(s) 179
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 8 cut(s) 481, 490, 1000, 1104, 1289, 1398, 1529, 1560
RsaNI GTAC 8 cut(s) 480, 489, 999, 1103, 1288, 1397, 1528, 1559
RseI CAYNNNNRTG 5 cut(s) 524, 701, 761, 1061, 1607
SaqAI TTAA 4 cut(s) 156, 173, 864, 908
SatI GCNGC 6 cut(s) 517, 605, 810, 813, 1053, 1187
Sau3AI GATC 6 cut(s) 179, 655, 693, 794, 917, 1218
Sau96I GGNCC 2 cut(s) 854, 1563
SchI GAGTC 2 cut(s) 831, 1378
ScrFI CCNGG 1 cut(s) 231
SduI GDGCHC 2 cut(s) 1168, 1379
SfaNI GCATC 3 cut(s) 796, 1326, 1401
SfuI TTCGAA 2 cut(s) 1438, 1588
SinI GGWCC 2 cut(s) 854, 1563
SmiMI CAYNNNNRTG 5 cut(s) 524, 701, 761, 1061, 1607
SpeI ACTAGT 1 cut(s) 1168
Sse9I AATT 7 cut(s) 169, 174, 1110, 1300, 1434, 1618, 1633
SseBI AGGCCT 2 cut(s) 336, 391
SsiI CCGC 1 cut(s) 1421
SspMI CTAG 3 cut(s) 1169, 1197, 1340
StuI AGGCCT 2 cut(s) 336, 391
StyD4I CCNGG 1 cut(s) 229
StyI CCWWGG 1 cut(s) 1531
TaaI ACNGT 3 cut(s) 190, 323, 1616
TaqI TCGA 6 cut(s) 30, 128, 961, 1438, 1588, 1699
TasI AATT 7 cut(s) 169, 174, 1110, 1300, 1434, 1618, 1633
TatI WGTACW 4 cut(s) 479, 488, 1287, 1396
TfiI GAWTC 3 cut(s) 32, 1145, 1585
Tru1I TTAA 4 cut(s) 156, 173, 864, 908
Tru9I TTAA 4 cut(s) 156, 173, 864, 908
TscAI CASTG 5 cut(s) 193, 291, 326, 892, 1464
TseFI GTSAC 2 cut(s) 282, 1039
TseI GCWGC 6 cut(s) 516, 604, 809, 812, 1052, 1186
Tsp45I GTSAC 2 cut(s) 282, 1039
TspGWI ACGGA 3 cut(s) 733, 910, 1576
TspRI CASTG 5 cut(s) 193, 291, 326, 892, 1464
VpaK11BI GGWCC 2 cut(s) 854, 1563
XapI RAATTY 3 cut(s) 1300, 1434, 1633
XspI CTAG 3 cut(s) 1169, 1197, 1340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.