RLG00000035180

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
62404238 .. 62409869
5632 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035180

Sequence Viewer

Length: 1548 bp
ATGGAAGAAATACAGTCACAGTCAGATAATTATAGGTCTTCTTCATCGTCAGCAAGCAGTCCAGCAAGTAGGGTGCCCTCAAGTAATTTTTTCTACTTGCGCAAACCTGGTTCAGTCAGACAACCAATCTCATTTGAAGACTCACCTGAATGGGAGGATACAGAGGTTGATGTTAGGGTGGAAGAAGGAGGTGACTCTATCAACATTGCAACCACTCCGGTCTCCCCATCGCTTTCAAAGCTCAATAGTGGGTCCTTGCCATCCCCACCATTACCAGAGGGTGCAACTGTAGTGAGAAAGATTGCAGGGGCTTCAATTGTGTGGAAGGACTTGACTGTTACAATAAAAGGAAAAAGAAAGTACTCTGAGAGGGTTGTGAAGAGTTCAAATGGTTATGCATTGCCAGGAACTATAACAGTAATTATGGGTCCTGCTAAATCGGGGAAGTCCACACTACTAAGAGCACTTGCAGGAAGACTGCCTCAATCAGCGAAAACGTATGGTGAAGTGTTTGTAAACGGTGCGAAATCATCGATGCCATATGGTTCATATGGTTTTGTTAAGAGGGAAATCAATTTAATTGGATCTCTCACTGTTCGGGAGTTTCTGTATTATTCGGCACTCCTTCAGCTTCCTGGTTTCTTTTGTCAGAAAAAGAGTGTAGTAGAGGATGCTATTCATGCCATGTCACTGGGTGATTATGCAAACAGATTGATAGGTGGCCACTGTTATATGAAAGGCCTTCCTAATGGAGAGAGAAGGCGCGTTAGCATTGCCCGAGAGCTTGTGATGAGGCCTCATGTTTTATTCATAGATGAGCCTCTTTATCACCTTGATAGTGTCTCTGCACTTCTGATGATGGTTACATTGAAGAAGCTTGCAAGTACAGGTTGCACTCTTATATTTACCATTTACCAGAGCAGCACAGAAGTGTTTGGCCTATTTGACAGGATTTGTCTGCTTTCTAATGGAAATACCCTTTTCTTTGGAGAAACATTGTCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCTTGTCCGATTATGCAAAGTCCTTCCGATCACTTTCTGCGTGCAATAAATACAGATTTTGATAGGATCATTGCAATGTGCAAGAACTGGCAGGATGACAATGGGGACTTCTCATCCGTAAACATGGACACGGCTGTGGCAATACGCACCCTTGAAGCAACTTATAGATCATCAGCTGATGCTGCTGCAGTTGAAAATATGATACTAAGACTCACAGAGAAGGAAGGTCCATTACTTAAAAGCAAGGGAAAAGCTGGCAGTGCTACACGGATAGCAGTCTTAACTTGGAGATCGTTATTGATAATGTCAAGGGAATGGAAATACTACTGGCTTCGACTTATTCTTTATATCATTTTTACGCTCTCTGTTGGTACAGCATTTTCTGGCTTAGGGCATTCTTTGTCTTCAGTTGTGGTGAGTATCTTAATATCACTTTTAGAACAGGATATCACTGGCATCTTTTGCCAGATTTTCCCCCTCTTTAATTTTCGTTTAATGAAAACTTTTTGTAATTGA

Protein Analysis

516

Amino Acids

56.83

Weight (kDa)

8.97

Isoelectric Point (pI)

48.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 134 - 275 4.7e-18 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 101
AccB1I GGYRCC 1 cut(s) 73
AccII CGCG 1 cut(s) 765
AclWI GGATC 2 cut(s) 592, 1106
AcoI YGGCCR 1 cut(s) 721
AcuI CTGAAG 2 cut(s) 611, 1422
AdeI CACNNNGTG 1 cut(s) 695
AfaI GTAC 3 cut(s) 362, 886, 1405
AgsI TTSAA 7 cut(s) 137, 237, 315, 387, 871, 1187, 1226
AjnI CCWGG 3 cut(s) 106, 403, 634
AleI CACNNNNGTG 2 cut(s) 929, 1166
AluBI AGCT 6 cut(s) 241, 631, 784, 877, 1208, 1286
AluI AGCT 6 cut(s) 241, 631, 784, 877, 1208, 1286
Alw21I GWGCWC 1 cut(s) 466
Alw26I GTCTC 2 cut(s) 226, 847
AlwI GGATC 2 cut(s) 592, 1106
Ama87I CYCGRG 1 cut(s) 777
AoxI GGCC 4 cut(s) 721, 739, 794, 937
ApeKI GCWGC 4 cut(s) 921, 1009, 1214, 1217
AspLEI GCGC 2 cut(s) 102, 765
AspS9I GGNCC 3 cut(s) 252, 428, 1259
AsuHPI GGTGA 6 cut(s) 135, 203, 515, 707, 821, 1459
AvaI CYCGRG 1 cut(s) 777
AvaII GGWCC 3 cut(s) 252, 428, 1259
BaeGI GKGCMC 1 cut(s) 78
BaeI ACNNNNGTAYC 2 cut(s) 150, 183
BalI TGGCCA 1 cut(s) 723
BanI GGYRCC 1 cut(s) 73
BarI GAAGNNNNNNTAC 2 cut(s) 1248, 1280
BbsI GAAGAC 4 cut(s) 30, 144, 481, 1428
Bbv12I GWGCWC 1 cut(s) 466
BbvI GCAGC 4 cut(s) 933, 1021, 1201, 1204
BccI CCATC 3 cut(s) 235, 268, 853
BceAI ACGGC 1 cut(s) 1179
BciT130I CCWGG 3 cut(s) 108, 405, 636
BciVI GTATCC 1 cut(s) 151
BcoDI GTCTC 2 cut(s) 226, 847
BfmI CTRYAG 2 cut(s) 288, 1218
BfuI GTATCC 1 cut(s) 151
BisI GCNGC 4 cut(s) 922, 1010, 1215, 1218
BlsI GCNGC 4 cut(s) 923, 1011, 1216, 1219
BmcAI AGTACT 1 cut(s) 362
Bme1390I CCNGG 3 cut(s) 108, 405, 636
Bme18I GGWCC 3 cut(s) 252, 428, 1259
BmeT110I CYCGRG 1 cut(s) 777
BmgT120I GGNCC 3 cut(s) 252, 428, 1259
BmiI GGNNCC 3 cut(s) 75, 253, 429
BmrFI CCNGG 3 cut(s) 108, 405, 636
BmrI ACTGGG 1 cut(s) 701
BmsI GCATC 4 cut(s) 525, 661, 1201, 1497
BmuI ACTGGG 1 cut(s) 701
BpiI GAAGAC 4 cut(s) 30, 144, 481, 1428
Bpu10I CCTNAGC 1 cut(s) 1420
BpuEI CTTGAG 1 cut(s) 64
Bsa29I ATCGAT 1 cut(s) 533
BsaI GGTCTC 1 cut(s) 226
BsaWI WCCGGW 1 cut(s) 217
BsaXI ACNNNNNCTCC 2 cut(s) 593, 623
Bse1I ACTGG 4 cut(s) 696, 1124, 1364, 1489
Bse3DI GCAATG 5 cut(s) 204, 398, 771, 1101, 1113
BseBI CCWGG 3 cut(s) 108, 405, 636
BseCI ATCGAT 1 cut(s) 533
BseGI GGATG 4 cut(s) 260, 676, 1132, 1145
BseMI GCAATG 5 cut(s) 204, 398, 771, 1101, 1113
BseMII CTCAG 1 cut(s) 357
BseNI ACTGG 4 cut(s) 696, 1124, 1364, 1489
BseSI GKGCMC 1 cut(s) 78
BseXI GCAGC 4 cut(s) 933, 1021, 1201, 1204
BsgI GTGCAG 1 cut(s) 831
Bsh1236I CGCG 1 cut(s) 765
BshFI GGCC 4 cut(s) 723, 741, 796, 939
BshNI GGYRCC 1 cut(s) 73
BshVI ATCGAT 1 cut(s) 533
BsiHKAI GWGCWC 1 cut(s) 466
BsiHKCI CYCGRG 1 cut(s) 777
BsiSI CCGG 1 cut(s) 218
BslFI GGGAC 1 cut(s) 1151
BsmAI GTCTC 2 cut(s) 226, 847
BsmFI GGGAC 1 cut(s) 1151
BsmI GAATGC 1 cut(s) 1426
BsnI GGCC 4 cut(s) 723, 741, 796, 939
Bso31I GGTCTC 1 cut(s) 226
BsoBI CYCGRG 1 cut(s) 777
Bsp1286I GDGCHC 2 cut(s) 78, 466
Bsp143I GATC 5 cut(s) 584, 1060, 1098, 1199, 1322
BspANI GGCC 4 cut(s) 723, 741, 796, 939
BspCNI CTCAG 1 cut(s) 358
BspDI ATCGAT 1 cut(s) 533
BspFNI CGCG 1 cut(s) 765
BspLI GGNNCC 3 cut(s) 75, 253, 429
BspMAI CTGCAG 1 cut(s) 1222
BspPI GGATC 2 cut(s) 592, 1106
BspT107I GGYRCC 1 cut(s) 73
BspTNI GGTCTC 1 cut(s) 226
BsrDI GCAATG 5 cut(s) 204, 398, 771, 1101, 1113
BsrI ACTGG 4 cut(s) 696, 1124, 1364, 1489
BssMI GATC 5 cut(s) 584, 1060, 1098, 1199, 1322
Bst2UI CCWGG 3 cut(s) 108, 405, 636
Bst4CI ACNGT 8 cut(s) 15, 21, 289, 337, 418, 521, 595, 728
Bst6I CTCTTC 1 cut(s) 374
BstAPI GCANNNNNTGC 1 cut(s) 1494
BstC8I GCNNGC 5 cut(s) 55, 879, 1007, 1074, 1288
BstDEI CTNAG 4 cut(s) 366, 458, 1238, 1420
BstF5I GGATG 4 cut(s) 260, 676, 1132, 1145
BstFNI CGCG 1 cut(s) 765
BstHHI GCGC 2 cut(s) 102, 765
BstKTI GATC 5 cut(s) 587, 1063, 1101, 1202, 1325
BstMAI GTCTC 2 cut(s) 226, 847
BstMBI GATC 5 cut(s) 584, 1060, 1098, 1199, 1322
BstMWI GCNNNNNNNGC 5 cut(s) 238, 680, 1214, 1292, 1494
BstNI CCWGG 3 cut(s) 108, 405, 636
BstSCI CCNGG 3 cut(s) 106, 403, 634
BstSFI CTRYAG 2 cut(s) 288, 1218
BstSLI GKGCMC 1 cut(s) 78
BstUI CGCG 1 cut(s) 765
BstV1I GCAGC 4 cut(s) 933, 1021, 1201, 1204
BstV2I GAAGAC 4 cut(s) 30, 144, 481, 1428
BstX2I RGATCY 1 cut(s) 584
BstXI CCANNNNNNTGG 1 cut(s) 691
BstYI RGATCY 1 cut(s) 584
Bsu15I ATCGAT 1 cut(s) 533
BsuI GTATCC 1 cut(s) 151
BsuRI GGCC 4 cut(s) 723, 741, 796, 939
BsuTUI ATCGAT 1 cut(s) 533
BtgZI GCGATG 1 cut(s) 213
BtsCI GGATG 4 cut(s) 260, 676, 1132, 1145
BtsI GCAGTG 1 cut(s) 1297
BtsIMutI CAGTG 5 cut(s) 591, 689, 724, 1297, 1482
Cac8I GCNNGC 5 cut(s) 55, 879, 1007, 1074, 1288
CfoI GCGC 2 cut(s) 102, 765
Cfr13I GGNCC 3 cut(s) 252, 428, 1259
ClaI ATCGAT 1 cut(s) 533
CsiI ACCWGGT 1 cut(s) 106
Csp6I GTAC 3 cut(s) 361, 885, 1404
CviAII CATG 4 cut(s) 680, 685, 800, 1156
CviQI GTAC 3 cut(s) 361, 885, 1404
DdeI CTNAG 4 cut(s) 366, 458, 1238, 1420
DpnI GATC 5 cut(s) 586, 1062, 1100, 1201, 1324
DpnII GATC 5 cut(s) 584, 1060, 1098, 1199, 1322
DraIII CACNNNGTG 1 cut(s) 695
EaeI YGGCCR 1 cut(s) 721
Eam1104I CTCTTC 1 cut(s) 374
EarI CTCTTC 1 cut(s) 374
Eco147I AGGCCT 2 cut(s) 741, 796
Eco31I GGTCTC 1 cut(s) 226
Eco32I GATATC 1 cut(s) 1480
Eco47I GGWCC 3 cut(s) 252, 428, 1259
Eco57I CTGAAG 2 cut(s) 611, 1422
Eco88I CYCGRG 1 cut(s) 777
EcoO109I RGGNCCY 2 cut(s) 252, 428
EcoRII CCWGG 3 cut(s) 106, 403, 634
EcoRV GATATC 1 cut(s) 1480
EcoT22I ATGCAT 1 cut(s) 400
FaeI CATG 4 cut(s) 683, 688, 803, 1159
FaqI GGGAC 1 cut(s) 1151
FatI CATG 4 cut(s) 679, 684, 799, 1155
FauNDI CATATG 2 cut(s) 541, 550
Fnu4HI GCNGC 4 cut(s) 922, 1010, 1215, 1218
FokI GGATG 4 cut(s) 247, 683, 1132, 1139
Fsp4HI GCNGC 4 cut(s) 922, 1010, 1215, 1218
FspI TGCGCA 1 cut(s) 101
GlaI GCGC 2 cut(s) 101, 764
GluI GCNGC 4 cut(s) 922, 1010, 1215, 1218
HaeIII GGCC 4 cut(s) 723, 741, 796, 939
HapII CCGG 1 cut(s) 218
HhaI GCGC 2 cut(s) 102, 765
Hin1II CATG 4 cut(s) 683, 688, 803, 1159
Hin6I GCGC 2 cut(s) 100, 763
HinP1I GCGC 2 cut(s) 100, 763
HindIII AAGCTT 1 cut(s) 875
HinfI GANTC 3 cut(s) 140, 194, 1242
HpaII CCGG 1 cut(s) 218
HphI GGTGA 6 cut(s) 135, 203, 515, 707, 821, 1459
Hpy166II GTNNAC 3 cut(s) 450, 517, 1153
Hpy188I TCNGA 7 cut(s) 25, 119, 367, 651, 855, 1041, 1060
Hpy188III TCNNGA 1 cut(s) 599
Hpy8I GTNNAC 3 cut(s) 450, 517, 1153
HpyAV CCTTC 8 cut(s) 179, 319, 635, 752, 753, 1065, 1246, 1250
HpyCH4III ACNGT 8 cut(s) 15, 21, 289, 337, 418, 521, 595, 728
HpyCH4IV ACGT 1 cut(s) 497
HpyF10VI GCNNNNNNNGC 5 cut(s) 238, 680, 1214, 1292, 1494
HpyF3I CTNAG 4 cut(s) 366, 458, 1238, 1420
HpySE526I ACGT 1 cut(s) 497
Hsp92II CATG 4 cut(s) 683, 688, 803, 1159
HspAI GCGC 2 cut(s) 100, 763
Kzo9I GATC 5 cut(s) 584, 1060, 1098, 1199, 1322
Lsp1109I GCAGC 4 cut(s) 933, 1021, 1201, 1204
LweI GCATC 4 cut(s) 525, 661, 1201, 1497
MabI ACCWGGT 1 cut(s) 106
MaeII ACGT 1 cut(s) 497
MaeIII GTNAC 5 cut(s) 15, 191, 337, 687, 862
MalI GATC 5 cut(s) 586, 1062, 1100, 1201, 1324
MboI GATC 5 cut(s) 584, 1060, 1098, 1199, 1322
MboII GAAGA 9 cut(s) 17, 30, 33, 149, 194, 391, 486, 883, 1428
MfeI CAATTG 1 cut(s) 315
MflI RGATCY 1 cut(s) 584
MhlI GDGCHC 2 cut(s) 78, 466
MlsI TGGCCA 1 cut(s) 723
MluCI AATT 8 cut(s) 28, 85, 315, 420, 574, 579, 1516, 1543
MluNI TGGCCA 1 cut(s) 723
MlyI GAGTC 3 cut(s) 134, 188, 1236
Mox20I TGGCCA 1 cut(s) 723
Mph1103I ATGCAT 1 cut(s) 400
MscI TGGCCA 1 cut(s) 723
MseI TTAA 7 cut(s) 561, 578, 1269, 1313, 1457, 1515, 1526
MslI CAYNNNNRTG 4 cut(s) 148, 929, 1106, 1166
Msp20I TGGCCA 1 cut(s) 723
MspA1I CMGCKG 1 cut(s) 1208
MspI CCGG 1 cut(s) 218
MspR9I CCNGG 3 cut(s) 108, 405, 636
MunI CAATTG 1 cut(s) 315
Mva1269I GAATGC 1 cut(s) 1426
MvaI CCWGG 3 cut(s) 108, 405, 636
MvnI CGCG 1 cut(s) 765
MwoI GCNNNNNNNGC 5 cut(s) 238, 680, 1214, 1292, 1494
NdeI CATATG 2 cut(s) 541, 550
NdeII GATC 5 cut(s) 584, 1060, 1098, 1199, 1322
NlaIII CATG 4 cut(s) 683, 688, 803, 1159
NlaIV GGNNCC 3 cut(s) 75, 253, 429
NmuCI GTSAC 3 cut(s) 15, 191, 687
NsbI TGCGCA 1 cut(s) 101
NsiI ATGCAT 1 cut(s) 400
OliI CACNNNNGTG 2 cut(s) 929, 1166
PceI AGGCCT 2 cut(s) 741, 796
PctI GAATGC 1 cut(s) 1426
PkrI GCNGC 4 cut(s) 923, 1011, 1216, 1219
PleI GAGTC 3 cut(s) 134, 188, 1236
PpsI GAGTC 3 cut(s) 134, 188, 1236
PpuMI RGGWCCY 2 cut(s) 252, 428
Psp5II RGGWCCY 2 cut(s) 252, 428
Psp6I CCWGG 3 cut(s) 106, 403, 634
PspGI CCWGG 3 cut(s) 106, 403, 634
PspN4I GGNNCC 3 cut(s) 75, 253, 429
PspPI GGNCC 3 cut(s) 252, 428, 1259
PspPPI RGGWCCY 2 cut(s) 252, 428
PstI CTGCAG 1 cut(s) 1222
PsuI RGATCY 1 cut(s) 584
PvuII CAGCTG 1 cut(s) 1208
RsaI GTAC 3 cut(s) 362, 886, 1405
RsaNI GTAC 3 cut(s) 361, 885, 1404
RseI CAYNNNNRTG 4 cut(s) 148, 929, 1106, 1166
SaqAI TTAA 7 cut(s) 561, 578, 1269, 1313, 1457, 1515, 1526
SatI GCNGC 4 cut(s) 922, 1010, 1215, 1218
Sau3AI GATC 5 cut(s) 584, 1060, 1098, 1199, 1322
Sau96I GGNCC 3 cut(s) 252, 428, 1259
ScaI AGTACT 1 cut(s) 362
SchI GAGTC 3 cut(s) 134, 188, 1236
ScrFI CCNGG 3 cut(s) 108, 405, 636
SduI GDGCHC 2 cut(s) 78, 466
SexAI ACCWGGT 1 cut(s) 106
SfaNI GCATC 4 cut(s) 525, 661, 1201, 1497
SfcI CTRYAG 2 cut(s) 288, 1218
SinI GGWCC 3 cut(s) 252, 428, 1259
SmiMI CAYNNNNRTG 4 cut(s) 148, 929, 1106, 1166
SmlI CTYRAG 1 cut(s) 79
SmoI CTYRAG 1 cut(s) 79
Sse9I AATT 8 cut(s) 28, 85, 315, 420, 574, 579, 1516, 1543
SseBI AGGCCT 2 cut(s) 741, 796
StuI AGGCCT 2 cut(s) 741, 796
StyD4I CCNGG 3 cut(s) 106, 403, 634
TaaI ACNGT 8 cut(s) 15, 21, 289, 337, 418, 521, 595, 728
TaiI ACGT 1 cut(s) 500
TaqI TCGA 2 cut(s) 533, 1366
TasI AATT 8 cut(s) 28, 85, 315, 420, 574, 579, 1516, 1543
TatI WGTACW 2 cut(s) 360, 884
Tru1I TTAA 7 cut(s) 561, 578, 1269, 1313, 1457, 1515, 1526
Tru9I TTAA 7 cut(s) 561, 578, 1269, 1313, 1457, 1515, 1526
TscAI CASTG 5 cut(s) 598, 696, 731, 1297, 1489
TseFI GTSAC 3 cut(s) 15, 191, 687
TseI GCWGC 4 cut(s) 921, 1009, 1214, 1217
Tsp45I GTSAC 3 cut(s) 15, 191, 687
TspDTI ATGAA 6 cut(s) 33, 537, 668, 749, 799, 1544
TspGWI ACGGA 2 cut(s) 1138, 1315
TspRI CASTG 5 cut(s) 598, 696, 731, 1297, 1489
VpaK11BI GGWCC 3 cut(s) 252, 428, 1259
ZrmI AGTACT 1 cut(s) 362
Zsp2I ATGCAT 1 cut(s) 400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.