Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0010714

Physical Location & Seq

Genomic Coordinates Reverse (-)

23451216 .. 23455867

Gene Structure 4652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1172200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGAGACAGAGGCGGCAGGCGGTGGTCGTAGTGGTGGTGTTGGTGGCGGTGGAAGTGGAAGAGGTGCATATTTGGTGTGGGAGGATCTAAGTGCGGTGCTTCCAAACTTCAGAAAGGAAGCACCCACAAAGAGGTTGCTCAATGGGCTGAGTGGGTTTGCTGAGCCTGGTAGGATCATGGCCATCATGGGTCCTTCTGGCTCTGGAAAATCAACTCTTCTTGATACTTTAGCAGGTAGACTCTCAAGAAATGTTGTTATGACTGGAAATATTTTGTTTAACGGGAAGAAGAAAAGACTGGCATATGGCGCTGTTGCTTATGTCACACAAGAGGATGTATTGTTGGGCACACTCACAGTTAGAGAAACCATAACGTACTCGGCTCACTTGCGACTTCCGAGTAATTTTACCAGAGAAGAGGTTAAGAGCATTGTGGAGGGAACAATTATGGAAATGGGGCTCCTGGAGTGTGCCGACCGATCAATTGGAAACTGGCACTTGAGAGGTATTAGTGGAGGGGAAAAGAAGAGAGTAAGCATTGCGCTTGAAATTCTAACAAGGCCCTGCATATTATTTCTTGATGAGCCTACTAGTGGCCTTGATAGTGCCTCCGCTTTCTTCGTTATTCAAACACTTCGAAGCATTGCTCGCGATGGAAGAACGGTTGTTTCATCTGTTCACCAGCCCAGTAGTGAAGTATTTGCACTCTTTGACGACCTCTTCTTACTATCTGGTGGTGAAACTGTTTATTTTGGAGAAGCAAAGACTGCTATTGATTTTTTCGCTGAAGCAGGTGTCCCATGTCCTAGTAGAAGAAATCCTTCTGACCACTTTCTACGTTGCATAAATTCGGACTTTGACATCGTGACTGCCACACTGAAAGGATCTCAAAGAATTCGGGATGTACCAACATCAGCAGACCCTCTCATGAATTTGGCAACAGCAGAGATCAAAGCTAGGCTAGTCGAGAAATACAAACGTTCAAAATATGCAAATAAAGCGAGAGCCAGGATGCAAGAAATATCAGAAATTGAGGGACATGTAATTGATTTGAAAAGTGGAAGTCAAGCAAGTTGGTGGAAGCAACTTTCAACCTTGCTGCGAAGGTCGTCCCTGAACATGTCTAGAGATGTGGGGTATTACTGGTTAAGGATAATCATCTACATATTTGTATCAATATGTGTTGGTACCATCTATTTTGAAGTTGGCCACGGCTATACTGCAATCTTTGCCCGGGCAGCATGTGGTGCGTTTATAACCGGCTTTATGACGTTTATGTCTATTGGAGGATTCCCATCTTTCATAGAGGAAATGAAGGTGTTTTATCGAGAAAGGCTCAATGGGTATTATGGAGTTTCGGTTTTCATCATTTCCAACTTCCTCTCTTCATTCCCATTCTTGGTTGCAGTTACTGTTAGTACTGGGACTATTACTTATCATCTGGTGAAATTTCGACCGGAGTTTTCGCATTATGTGTACTTCTGTCTCAATATATATCTCTGCATTTCGGTGATAGAGAGCCTCATGATGGTTGTCGCTTCTCTGGTTCCCAATTTCCTAATGGGTATAATAACAGGAGCTGGAATCATGGGCATCCTGATGATGACCTCGGGTTTCTTCCGCTTGCTGCCGGATCTTCCTAAGCCATTCTGGCGCTACCCAATTTCATATCTCAGCTATGGCTCATGGGCAATACAGGGTTCCTACAAGAACGATTTCATTGGCCTTGAGTTCGAGCCCATGATACCTGGTGAGCCAAACCTTACAGGCGAGTATATCGTCCAACATATGTTTGGGATACCAATAGACCACTCCAAGTGGTGGGACTTGGTTGCTATTGTAGCCATTCTTGTAATGTACCGGGTTCTCTTCTTCCTAATTCTCAAGTTCAAGGAGAATGCATCGCCGTTGTTTCAGTCACTCTACGCAAAGAGAACGCTGCACCACCTTGGTAAGAGGCCGTCGTTCAGGAAACTGCCCTCTGTTTCTTCCAATAGGCACCAACCTCTCCACTCACTGTCTTCTCAAGAGGGCCTCAACTCTCCACTGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0009628 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

685

Amino Acids

76.03

Weight (kDa)

9.18

Isoelectric Point (pI)

41.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	47 - 198	8.6e-25	ABC transporter
ABC2_membrane_7	PF19055	227 - 283	2.7e-11	ABC-2 type transporter
ABC2_membrane	PF01061	362 - 571	2.5e-39	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51500 AT3G21090
fragaria_vesca	FvH4_3g28460 FvH4_3g28460 FvH4_3g28460
malus_domestica	MD03G1172200.v1.1 MD11G1189900.v1.1
prunus_persica	Prupe.4G254600_v2.0.a1 Prupe.4G254600_v2.0.a1
pyrus_communis	pycom03g12930 pycom11g16700
rosa_chinensis	RchiOBHm_Chr5g0053001
rosa_laevigata	RLG00000034782
rosa_multiflora	Rmu_sc0003030.1_g000007
rosa_roxburghii	Rroxscaffold_1G00028800
rosa_rugosa	Rorug05G0268800 Rorug05G0268900
rosa_samantha	Rh5AG341200 Rh5CG378400
rosa_wichuraiana	Rw5G032160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1256
AarI	CACCTGC	1 cut(s)	782
AasI	GACNNNNNNGTC	1 cut(s)	1276
Acc36I	ACCTGC	2 cut(s)	224, 782
Acc65I	GGTACC	1 cut(s)	1187
AccB1I	GGYRCC	2 cut(s)	1187, 1998
AccB7I	CCANNNNNTGG	1 cut(s)	1821
AccI	GTMKAC	1 cut(s)	238
AccII	CGCG	1 cut(s)	651
AciI	CCGC	6 cut(s)	14, 21, 48, 95, 612, 1621
AclI	AACGTT	1 cut(s)	979
AclWI	GGATC	4 cut(s)	93, 182, 892, 1641
AcoI	YGGCCR	2 cut(s)	180, 1207
AcsI	RAATTY	5 cut(s)	549, 847, 894, 931, 1448
AcuI	CTGAAG	2 cut(s)	94, 807
AfaI	GTAC	6 cut(s)	377, 906, 1189, 1420, 1478, 1859
AfiI	CCNNNNNNNGG	5 cut(s)	132, 593, 1399, 1528, 1821
AflIII	ACRYGT	2 cut(s)	1039, 1119
AgsI	TTSAA	7 cut(s)	548, 629, 984, 1054, 1092, 1202, 1891
AhlI	ACTAGT	1 cut(s)	590
AjnI	CCWGG	4 cut(s)	166, 462, 1007, 1747
AluBI	AGCT	3 cut(s)	956, 1580, 1677
AluI	AGCT	3 cut(s)	956, 1580, 1677
Alw26I	GTCTC	1 cut(s)	1490
AlwI	GGATC	4 cut(s)	93, 182, 892, 1641
AlwNI	CAGNNNCTG	2 cut(s)	1412, 1580
Ama87I	CYCGRG	2 cut(s)	1233, 1609
AoxI	GGCC	7 cut(s)	180, 560, 595, 1207, 1723, 1958, 2032
ApeKI	GCWGC	4 cut(s)	1099, 1238, 1627, 1939
ApoI	RAATTY	5 cut(s)	549, 847, 894, 931, 1448
Asp700I	GAANNNNTTC	2 cut(s)	820, 1715
Asp718I	GGTACC	1 cut(s)	1187
AspLEI	GCGC	3 cut(s)	311, 544, 1656
AspS9I	GGNCC	3 cut(s)	191, 561, 2032
AsuC2I	CCSGG	3 cut(s)	1234, 1235, 1862
AsuHPI	GGTGA	5 cut(s)	671, 749, 1456, 1522, 1763
AsuII	TTCGAA	1 cut(s)	637
AvaI	CYCGRG	2 cut(s)	1233, 1609
AvaII	GGWCC	1 cut(s)	191
BaeGI	GKGCMC	1 cut(s)	350
BalI	TGGCCA	2 cut(s)	182, 1209
BanI	GGYRCC	2 cut(s)	1187, 1998
BanII	GRGCYC	2 cut(s)	462, 1740
BbsI	GAAGAC	1 cut(s)	2013
BbvI	GCAGC	4 cut(s)	1086, 1250, 1614, 1926
BccI	CCATC	5 cut(s)	191, 647, 1199, 1303, 1522
BceAI	ACGGC	3 cut(s)	1228, 1891, 1945
BciT130I	CCWGG	4 cut(s)	168, 464, 1009, 1749
BciVI	GTATCC	1 cut(s)	1791
BcnI	CCSGG	3 cut(s)	1234, 1235, 1862
BcoDI	GTCTC	1 cut(s)	1490
BcuI	ACTAGT	1 cut(s)	590
BfaI	CTAG	5 cut(s)	591, 807, 957, 962, 1125
BfmI	CTRYAG	1 cut(s)	2048
BfoI	RGCGCY	2 cut(s)	312, 1657
BfuAI	ACCTGC	2 cut(s)	224, 782
BfuI	GTATCC	1 cut(s)	1791
BglI	GCCNNNNNGGC	1 cut(s)	1651
BisI	GCNGC	5 cut(s)	15, 1100, 1239, 1628, 1940
BlpI	GCTNAGC	1 cut(s)	162
BlsI	GCNGC	5 cut(s)	16, 1101, 1240, 1629, 1941
BmcAI	AGTACT	1 cut(s)	1420
Bme1390I	CCNGG	7 cut(s)	168, 464, 1009, 1234, 1235, 1749, 1862
Bme18I	GGWCC	1 cut(s)	191
BmeT110I	CYCGRG	2 cut(s)	1233, 1609
BmgT120I	GGNCC	3 cut(s)	191, 561, 2032
BmiI	GGNNCC	6 cut(s)	192, 461, 1189, 1548, 1702, 2000
BmrFI	CCNGG	7 cut(s)	168, 464, 1009, 1234, 1235, 1749, 1862
BmrI	ACTGGG	2 cut(s)	681, 1431
BmsI	GCATC	3 cut(s)	1002, 1602, 1910
BmuI	ACTGGG	2 cut(s)	681, 1431
BpiI	GAAGAC	1 cut(s)	2013
BplI	GAGNNNNNCTC	2 cut(s)	1320, 1352
BpmI	CTGGAG	1 cut(s)	485
Bpu10I	CCTNAGC	1 cut(s)	1641
Bpu1102I	GCTNAGC	1 cut(s)	162
Bpu14I	TTCGAA	1 cut(s)	637
BpuEI	CTTGAG	5 cut(s)	229, 520, 1748, 1868, 2010
BpuMI	CCSGG	3 cut(s)	1234, 1235, 1862
BsaBI	GATNNNNATC	2 cut(s)	1157, 1294
BsaJI	CCNNGG	4 cut(s)	1210, 1233, 1608, 1948
BsaWI	WCCGGW	1 cut(s)	1456
BsaXI	ACNNNNNCTCC	2 cut(s)	1344, 1374
Bsc4I	CCNNNNNNNGG	5 cut(s)	132, 593, 1399, 1528, 1821
Bse118I	RCCGGY	1 cut(s)	1259
Bse1I	ACTGG	6 cut(s)	268, 303, 497, 687, 1148, 1426
Bse3DI	GCAATG	2 cut(s)	537, 642
Bse8I	GATNNNNATC	2 cut(s)	1157, 1294
BseBI	CCWGG	4 cut(s)	168, 464, 1009, 1749
BseDI	CCNNGG	4 cut(s)	1210, 1233, 1608, 1948
BseGI	GGATG	4 cut(s)	340, 907, 1017, 1593
BseJI	GATNNNNATC	2 cut(s)	1157, 1294
BseLI	CCNNNNNNNGG	5 cut(s)	132, 593, 1399, 1528, 1821
BseMI	GCAATG	2 cut(s)	537, 642
BseMII	CTCAG	3 cut(s)	140, 153, 1687
BseNI	ACTGG	6 cut(s)	268, 303, 497, 687, 1148, 1426
BseSI	GKGCMC	1 cut(s)	350
BseXI	GCAGC	4 cut(s)	1086, 1250, 1614, 1926
BsgI	GTGCAG	1 cut(s)	1925
Bsh1236I	CGCG	1 cut(s)	651
Bsh1285I	CGRYCG	2 cut(s)	478, 1457
BshFI	GGCC	7 cut(s)	182, 562, 597, 1209, 1725, 1960, 2034
BshNI	GGYRCC	2 cut(s)	1187, 1998
BsiEI	CGRYCG	2 cut(s)	478, 1457
BsiHKCI	CYCGRG	2 cut(s)	1233, 1609
BsiSI	CCGG	5 cut(s)	1234, 1260, 1457, 1631, 1861
BslFI	GGGAC	5 cut(s)	782, 1050, 1096, 1438, 1838
BslI	CCNNNNNNNGG	5 cut(s)	132, 593, 1399, 1528, 1821
BsmAI	GTCTC	1 cut(s)	1490
BsmFI	GGGAC	5 cut(s)	782, 1050, 1096, 1438, 1838
BsmI	GAATGC	1 cut(s)	1903
BsnI	GGCC	7 cut(s)	182, 562, 597, 1209, 1725, 1960, 2034
BsoBI	CYCGRG	2 cut(s)	1233, 1609
Bsp119I	TTCGAA	1 cut(s)	637
Bsp1286I	GDGCHC	3 cut(s)	350, 462, 1740
Bsp143I	GATC	6 cut(s)	85, 174, 479, 884, 948, 1633
Bsp1720I	GCTNAGC	1 cut(s)	162
Bsp68I	TCGCGA	1 cut(s)	651
BspACI	CCGC	6 cut(s)	14, 21, 48, 95, 612, 1621
BspANI	GGCC	7 cut(s)	182, 562, 597, 1209, 1725, 1960, 2034
BspCNI	CTCAG	3 cut(s)	141, 154, 1686
BspFNI	CGCG	1 cut(s)	651
BspHI	TCATGA	2 cut(s)	927, 1524
BspLI	GGNNCC	6 cut(s)	192, 461, 1189, 1548, 1702, 2000
BspMAI	CTGCAG	1 cut(s)	2052
BspMI	ACCTGC	2 cut(s)	224, 782
BspPI	GGATC	4 cut(s)	93, 182, 892, 1641
BspT104I	TTCGAA	1 cut(s)	637
BspT107I	GGYRCC	2 cut(s)	1187, 1998
BsrDI	GCAATG	2 cut(s)	537, 642
BsrFI	RCCGGY	1 cut(s)	1259
BsrI	ACTGG	6 cut(s)	268, 303, 497, 687, 1148, 1426
BssAI	RCCGGY	1 cut(s)	1259
BssECI	CCNNGG	4 cut(s)	1210, 1233, 1608, 1948
BssMI	GATC	6 cut(s)	85, 174, 479, 884, 948, 1633
BssT1I	CCWWGG	1 cut(s)	1948
Bst2UI	CCWGG	4 cut(s)	168, 464, 1009, 1749
Bst4CI	ACNGT	5 cut(s)	358, 664, 745, 1414, 2019
Bst6I	CTCTTC	7 cut(s)	55, 222, 411, 521, 725, 1390, 1874
BstAPI	GCANNNNNTGC	3 cut(s)	767, 1229, 1247
BstBI	TTCGAA	1 cut(s)	637
BstC8I	GCNNGC	3 cut(s)	19, 649, 1625
BstDEI	CTNAG	5 cut(s)	89, 149, 162, 1641, 1673
BstDSI	CCRYGG	1 cut(s)	1210
BstF5I	GGATG	4 cut(s)	340, 907, 1017, 1593
BstFNI	CGCG	1 cut(s)	651
BstH2I	RGCGCY	2 cut(s)	312, 1657
BstHHI	GCGC	3 cut(s)	311, 544, 1656
BstKTI	GATC	6 cut(s)	88, 177, 482, 887, 951, 1636
BstMAI	GTCTC	1 cut(s)	1490
BstMBI	GATC	6 cut(s)	85, 174, 479, 884, 948, 1633
BstMCI	CGRYCG	2 cut(s)	478, 1457
BstNI	CCWGG	4 cut(s)	168, 464, 1009, 1749
BstNSI	RCATGY	3 cut(s)	1043, 1123, 1245
BstSCI	CCNGG	7 cut(s)	166, 462, 1007, 1232, 1233, 1747, 1860
BstSFI	CTRYAG	1 cut(s)	2048
BstSLI	GKGCMC	1 cut(s)	350
BstUI	CGCG	1 cut(s)	651
BstV1I	GCAGC	4 cut(s)	1086, 1250, 1614, 1926
BstV2I	GAAGAC	1 cut(s)	2013
BstX2I	RGATCY	3 cut(s)	85, 884, 1633
BstYI	RGATCY	3 cut(s)	85, 884, 1633
BsuI	GTATCC	1 cut(s)	1791
BsuRI	GGCC	7 cut(s)	182, 562, 597, 1209, 1725, 1960, 2034
BtgI	CCRYGG	1 cut(s)	1210
BtgZI	GCGATG	2 cut(s)	666, 1887
BtsCI	GGATG	4 cut(s)	340, 907, 1017, 1593
BtsI	GCAGTG	1 cut(s)	2045
BtsIMutI	CAGTG	3 cut(s)	875, 2015, 2045
BtuMI	TCGCGA	1 cut(s)	651
BveI	ACCTGC	2 cut(s)	224, 782
Cac8I	GCNNGC	3 cut(s)	19, 649, 1625
CaiI	CAGNNNCTG	2 cut(s)	1412, 1580
CciI	TCATGA	2 cut(s)	927, 1524
CfoI	GCGC	3 cut(s)	311, 544, 1656
Cfr10I	RCCGGY	1 cut(s)	1259
Cfr13I	GGNCC	3 cut(s)	191, 561, 2032
Cfr9I	CCCGGG	1 cut(s)	1233
CsiI	ACCWGGT	1 cut(s)	1747
Csp6I	GTAC	6 cut(s)	376, 905, 1188, 1419, 1477, 1858
CviQI	GTAC	6 cut(s)	376, 905, 1188, 1419, 1477, 1858
DdeI	CTNAG	5 cut(s)	89, 149, 162, 1641, 1673
DpnI	GATC	6 cut(s)	87, 176, 481, 886, 950, 1635
DpnII	GATC	6 cut(s)	85, 174, 479, 884, 948, 1633
DrdI	GACNNNNNNGTC	1 cut(s)	1276
DseDI	GACNNNNNNGTC	1 cut(s)	1276
EaeI	YGGCCR	2 cut(s)	180, 1207
Eam1104I	CTCTTC	7 cut(s)	55, 222, 411, 521, 725, 1390, 1874
EarI	CTCTTC	7 cut(s)	55, 222, 411, 521, 725, 1390, 1874
Eco130I	CCWWGG	1 cut(s)	1948
Eco24I	GRGCYC	2 cut(s)	462, 1740
Eco47I	GGWCC	1 cut(s)	191
Eco57I	CTGAAG	2 cut(s)	94, 807
Eco88I	CYCGRG	2 cut(s)	1233, 1609
EcoO109I	RGGNCCY	3 cut(s)	191, 561, 2032
EcoRI	GAATTC	1 cut(s)	894
EcoRII	CCWGG	4 cut(s)	166, 462, 1007, 1747
EcoT14I	CCWWGG	1 cut(s)	1948
EcoT22I	ATGCAT	1 cut(s)	1903
EcoT38I	GRGCYC	2 cut(s)	462, 1740
ErhI	CCWWGG	1 cut(s)	1948
FalI	AAGNNNNNCTT	2 cut(s)	805, 837
FaqI	GGGAC	5 cut(s)	782, 1050, 1096, 1438, 1838
FauNDI	CATATG	2 cut(s)	304, 1788
FblI	GTMKAC	1 cut(s)	238
Fnu4HI	GCNGC	5 cut(s)	15, 1100, 1239, 1628, 1940
FokI	GGATG	4 cut(s)	347, 914, 1024, 1580
FriOI	GRGCYC	2 cut(s)	462, 1740
Fsp4HI	GCNGC	5 cut(s)	15, 1100, 1239, 1628, 1940
FspBI	CTAG	5 cut(s)	591, 807, 957, 962, 1125
GlaI	GCGC	3 cut(s)	310, 543, 1655
GluI	GCNGC	5 cut(s)	15, 1100, 1239, 1628, 1940
GsuI	CTGGAG	1 cut(s)	485
HaeII	RGCGCY	2 cut(s)	312, 1657
HaeIII	GGCC	7 cut(s)	182, 562, 597, 1209, 1725, 1960, 2034
HapII	CCGG	5 cut(s)	1234, 1260, 1457, 1631, 1861
HhaI	GCGC	3 cut(s)	311, 544, 1656
Hin6I	GCGC	3 cut(s)	309, 542, 1654
HinP1I	GCGC	3 cut(s)	309, 542, 1654
HinfI	GANTC	3 cut(s)	240, 1290, 1584
HpaII	CCGG	5 cut(s)	1234, 1260, 1457, 1631, 1861
HphI	GGTGA	5 cut(s)	671, 749, 1456, 1522, 1763
Hpy166II	GTNNAC	3 cut(s)	239, 679, 1477
Hpy188I	TCNGA	5 cut(s)	113, 399, 826, 853, 1027
Hpy8I	GTNNAC	3 cut(s)	239, 679, 1477
Hpy99I	CGWCG	1 cut(s)	1966
HpyAV	CCTTC	4 cut(s)	204, 831, 1098, 1309
HpyCH4III	ACNGT	5 cut(s)	358, 664, 745, 1414, 2019
HpyCH4IV	ACGT	4 cut(s)	374, 838, 979, 1271
HpyF3I	CTNAG	5 cut(s)	89, 149, 162, 1641, 1673
HpySE526I	ACGT	4 cut(s)	374, 838, 979, 1271
HspAI	GCGC	3 cut(s)	309, 542, 1654
KpnI	GGTACC	1 cut(s)	1191
Kzo9I	GATC	6 cut(s)	85, 174, 479, 884, 948, 1633
LmnI	GCTCC	2 cut(s)	465, 1577
Lsp1109I	GCAGC	4 cut(s)	1086, 1250, 1614, 1926
LweI	GCATC	3 cut(s)	1002, 1602, 1910
MabI	ACCWGGT	1 cut(s)	1747
MaeI	CTAG	5 cut(s)	591, 807, 957, 962, 1125
MaeII	ACGT	4 cut(s)	374, 838, 979, 1271
MaeIII	GTNAC	4 cut(s)	322, 865, 1408, 1917
MalI	GATC	6 cut(s)	87, 176, 481, 886, 950, 1635
MboI	GATC	6 cut(s)	85, 174, 479, 884, 948, 1633
MfeI	CAATTG	1 cut(s)	483
MflI	RGATCY	3 cut(s)	85, 884, 1633
MhlI	GDGCHC	3 cut(s)	350, 462, 1740
MlsI	TGGCCA	2 cut(s)	182, 1209
MluNI	TGGCCA	2 cut(s)	182, 1209
MlyI	GAGTC	1 cut(s)	234
MmeI	TCCRAC	2 cut(s)	1398, 1807
Mox20I	TGGCCA	2 cut(s)	182, 1209
Mph1103I	ATGCAT	1 cut(s)	1903
MroXI	GAANNNNTTC	2 cut(s)	820, 1715
MscI	TGGCCA	2 cut(s)	182, 1209
MseI	TTAA	3 cut(s)	279, 423, 1148
MslI	CAYNNNNRTG	2 cut(s)	1508, 1598
Msp20I	TGGCCA	2 cut(s)	182, 1209
MspI	CCGG	5 cut(s)	1234, 1260, 1457, 1631, 1861
MspR9I	CCNGG	7 cut(s)	168, 464, 1009, 1234, 1235, 1749, 1862
MunI	CAATTG	1 cut(s)	483
Mva1269I	GAATGC	1 cut(s)	1903
MvaI	CCWGG	4 cut(s)	168, 464, 1009, 1749
MvnI	CGCG	1 cut(s)	651
NciI	CCSGG	3 cut(s)	1234, 1235, 1862
NdeI	CATATG	2 cut(s)	304, 1788
NdeII	GATC	6 cut(s)	85, 174, 479, 884, 948, 1633
NlaIV	GGNNCC	6 cut(s)	192, 461, 1189, 1548, 1702, 2000
NmeAIII	GCCGAG	1 cut(s)	359
NmuCI	GTSAC	3 cut(s)	322, 865, 1917
NruI	TCGCGA	1 cut(s)	651
NsiI	ATGCAT	1 cut(s)	1903
NspI	RCATGY	3 cut(s)	1043, 1123, 1245
NspV	TTCGAA	1 cut(s)	637
PagI	TCATGA	2 cut(s)	927, 1524
PaqCI	CACCTGC	1 cut(s)	782
PciI	ACATGT	2 cut(s)	1039, 1119
PctI	GAATGC	1 cut(s)	1903
PdmI	GAANNNNTTC	2 cut(s)	820, 1715
PfeI	GAWTC	2 cut(s)	1290, 1584
PflMI	CCANNNNNTGG	1 cut(s)	1821
PfoI	TCCNGGA	1 cut(s)	462
PkrI	GCNGC	5 cut(s)	16, 1101, 1240, 1629, 1941
PleI	GAGTC	1 cut(s)	234
PpsI	GAGTC	1 cut(s)	234
PpuMI	RGGWCCY	1 cut(s)	191
PscI	ACATGT	2 cut(s)	1039, 1119
PsiI	TTATAA	1 cut(s)	1256
Psp1406I	AACGTT	1 cut(s)	979
Psp5II	RGGWCCY	1 cut(s)	191
Psp6I	CCWGG	4 cut(s)	166, 462, 1007, 1747
PspGI	CCWGG	4 cut(s)	166, 462, 1007, 1747
PspN4I	GGNNCC	6 cut(s)	192, 461, 1189, 1548, 1702, 2000
PspPI	GGNCC	3 cut(s)	191, 561, 2032
PspPPI	RGGWCCY	1 cut(s)	191
PstI	CTGCAG	1 cut(s)	2052
PstNI	CAGNNNCTG	2 cut(s)	1412, 1580
PsuI	RGATCY	3 cut(s)	85, 884, 1633
RruI	TCGCGA	1 cut(s)	651
RsaI	GTAC	6 cut(s)	377, 906, 1189, 1420, 1478, 1859
RsaNI	GTAC	6 cut(s)	376, 905, 1188, 1419, 1477, 1858
RseI	CAYNNNNRTG	2 cut(s)	1508, 1598
SaqAI	TTAA	3 cut(s)	279, 423, 1148
SatI	GCNGC	5 cut(s)	15, 1100, 1239, 1628, 1940
Sau3AI	GATC	6 cut(s)	85, 174, 479, 884, 948, 1633
Sau96I	GGNCC	3 cut(s)	191, 561, 2032
ScaI	AGTACT	1 cut(s)	1420
SchI	GAGTC	1 cut(s)	234
ScrFI	CCNGG	7 cut(s)	168, 464, 1009, 1234, 1235, 1749, 1862
SduI	GDGCHC	3 cut(s)	350, 462, 1740
SexAI	ACCWGGT	1 cut(s)	1747
SfaNI	GCATC	3 cut(s)	1002, 1602, 1910
SfcI	CTRYAG	1 cut(s)	2048
SfuI	TTCGAA	1 cut(s)	637
SinI	GGWCC	1 cut(s)	191
SmaI	CCCGGG	1 cut(s)	1235
SmiMI	CAYNNNNRTG	2 cut(s)	1508, 1598
SmlI	CTYRAG	5 cut(s)	244, 499, 1727, 1883, 2025
SmoI	CTYRAG	5 cut(s)	244, 499, 1727, 1883, 2025
SpeI	ACTAGT	1 cut(s)	590
SrfI	GCCCGGGC	1 cut(s)	1235
SsiI	CCGC	6 cut(s)	14, 21, 48, 95, 612, 1621
SspI	AATATT	1 cut(s)	271
SspMI	CTAG	5 cut(s)	591, 807, 957, 962, 1125
StyD4I	CCNGG	7 cut(s)	166, 462, 1007, 1232, 1233, 1747, 1860
StyI	CCWWGG	1 cut(s)	1948
TaaI	ACNGT	5 cut(s)	358, 664, 745, 1414, 2019
TaiI	ACGT	4 cut(s)	377, 841, 982, 1274
TaqI	TCGA	5 cut(s)	637, 966, 1327, 1453, 1734
TaqII	GACCGA	1 cut(s)	492
TatI	WGTACW	2 cut(s)	1418, 1476
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	2 cut(s)	1290, 1584
Tru1I	TTAA	3 cut(s)	279, 423, 1148
Tru9I	TTAA	3 cut(s)	279, 423, 1148
TscAI	CASTG	3 cut(s)	882, 2022, 2052
TseFI	GTSAC	3 cut(s)	322, 865, 1917
TseI	GCWGC	4 cut(s)	1099, 1238, 1627, 1939
Tsp45I	GTSAC	3 cut(s)	322, 865, 1917
TspDTI	ATGAA	8 cut(s)	660, 944, 1291, 1328, 1354, 1377, 1656, 1708
TspMI	CCCGGG	1 cut(s)	1233
TspRI	CASTG	3 cut(s)	882, 2022, 2052
Van91I	CCANNNNNTGG	1 cut(s)	1821
VpaK11BI	GGWCC	1 cut(s)	191
XapI	RAATTY	5 cut(s)	549, 847, 894, 931, 1448
XbaI	TCTAGA	1 cut(s)	1124
XceI	RCATGY	3 cut(s)	1043, 1123, 1245
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1558, 1790
XmaI	CCCGGG	1 cut(s)	1233
XmiI	GTMKAC	1 cut(s)	238
XmnI	GAANNNNTTC	2 cut(s)	820, 1715
XspI	CTAG	5 cut(s)	591, 807, 957, 962, 1125
ZrmI	AGTACT	1 cut(s)	1420
Zsp2I	ATGCAT	1 cut(s)	1903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.