Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0010714

Physical Location & Seq

Genomic Coordinates Reverse (-)

55536928 .. 55542362

Gene Structure 5435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG341200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGACTGGAAGTATACTTTTCAATGGGAAGAAGAAAAGACTAGCCTATGGTGCTGTTGCTTATGTCACACAAGAGGATGTATTGTTAGGAACACTGACAGTTAGAGAAACCATTACATACTCAGCATACTTGAGGCTTCCAACTAGTTTTACCAGAGAAGAGGTCAAGAGCATTGTGGAAGGAACAATCAATGAAATGGGCCTCCTTGACTGCGCAGATCGCTCTATTGGAAACTGGCACTTAAGAGGCATTAGTGGTGGTGAGAAGAAAAGAGTGAGCATTGCACTTGAAATTCTGACAAGGCCTCGCATATTGTTCCTTGATGAACCTACTAGTGGTCTGGATAGTGCCTCGGCTTTCTTTGTTATTCAAACACTCAGAAGCATTGCTCGTGATGGGAGAACAGTTGTTTCATCAGTTCACCAGCCAAGTAGTGAAGTATTTGCACTTTTTGATGACCTCTTCTTACTATCTGGTGGTGAAACTGTTTATTTCGGAGATGCAAAGACGGCTATAGATTTCTTTGCTGAAGCGGGTGTCCCATGTCCTAGTAGAAGAAATCCCTCTGATCACTTCCTACGCTGCATAAACTCAGACTTTGACATTGTAACTGCCACACTGAAAGGATCTCAAAGAATTCGTGATGTCCCGACATCAGCAGACCCCCTCATGAATTTGGCAACGGCAGAGATCAAAGCTAGACTTGTTGAGAAATACAGGCGTTCAAAGTACGCACATAGGGCGAAAGCTAGGATGCAGGAAATATCAGCAATTCAAGATCATGTAGATGACATGAAAAGTGGAAGTCAAGCAAGCTGGTGGAGGCAACTTTCAACCTTGCTCCGAAGATCATCTTTGAACATGTCTAGAGACGTGGGCTATTACTGGTTAAGGATATGCATCTATATAGTTGTATCAGTATGTGTTGGTACTATCTATTTCCACGTTGGCACCGGCTATACTGCAATCTTTGCGCGGGCAGCTTGTGGTGCATTCATAACAGGCTTCATGACATTCATGTCTATTGGAGGTTTCCCATCCTTTATAGAAGAAATGAAGGTATTTTATCGAGAAAGGCTCAATGGGTATTATGGAGTTTCGGTGTTCATCATATCCAACTTCCTGTCTTCATTCCCGTTCTTGGCTGCAATTACTCTCTCTACTGGGACTATCACTTACTATTTAGTGAAATTTCGGACAGAATTTTCTCATTATGTCTTCTTCAGTCTCAATATATTTCTCTGCATTTCTGTGGTAGAGAGCCTCATGATGGTGGTAGCTTCTCTGGTTCCCAACTTCCTCATGGGCATCATAACAGGAGCTGGAATCATGGGCATCCTGATGATGACTGCTGGTTTCTTCCGCTTACTGCCGGATCTTCCCAAGCCATTCTGGCGCTACCCGATTTCATTTCTCAGTTATGGCTCATGGTCAATTCAGGGAGCCTATAAGAACGACTTCCTCGGCCTTGAGTTCGAGCCCATGTTCCCTGGCCAACCAAAATTGTCGGGCGAGTATGTGGTCACACATATATTTGGTATTCCATTGGAGCATTCCAAGTGGTGGGACTTGGCTGCTATTGTTGCTATTCTTGTAACGTACCGGGTCCTCTTTTTCTTAATTCTCAAGTTCAAGGAGAGTGCATCCCCATTGTTTCAGACACTCTATGCAAAGAGAACACTACACCATCTTGATAAGCGGCCTTCCTTCAGAAAAAATCCCCCATTCCCTTCCAACAGGCACCAACCTCTTCACTCACTATCTTCTCAAGAAGGTCTCAACTCTCCACTCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0009628 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

598

Amino Acids

67.31

Weight (kDa)

9.26

Isoelectric Point (pI)

38.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	4 - 112	2.7e-13	ABC transporter
ABC2_membrane_7	PF19055	141 - 197	2.4e-11	ABC-2 type transporter
ABC2_membrane	PF01061	275 - 485	1.1e-35	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51500 AT3G21090
fragaria_vesca	FvH4_3g28460 FvH4_3g28460 FvH4_3g28460
malus_domestica	MD03G1172200.v1.1 MD11G1189900.v1.1
prunus_persica	Prupe.4G254600_v2.0.a1 Prupe.4G254600_v2.0.a1
pyrus_communis	pycom03g12930 pycom11g16700
rosa_chinensis	RchiOBHm_Chr5g0053001
rosa_laevigata	RLG00000034782
rosa_multiflora	Rmu_sc0003030.1_g000007
rosa_roxburghii	Rroxscaffold_1G00028800
rosa_rugosa	Rorug05G0268800 Rorug05G0268900
rosa_samantha	Rh5AG341200 Rh5CG378400
rosa_wichuraiana	Rw5G032160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1018
Acc16I	TGCGCA	1 cut(s)	214
AccB1I	GGYRCC	2 cut(s)	950, 1740
AccB7I	CCANNNNNTGG	1 cut(s)	1563
AccI	GTMKAC	1 cut(s)	13
AccII	CGCG	1 cut(s)	976
AciI	CCGC	4 cut(s)	533, 976, 1363, 1699
AclWI	GGATC	2 cut(s)	634, 1383
AcoI	YGGCCR	1 cut(s)	1492
AcsI	RAATTY	5 cut(s)	291, 636, 673, 1190, 1202
AcuI	CTGAAG	3 cut(s)	549, 1207, 1693
AfaI	GTAC	3 cut(s)	731, 931, 1601
AfiI	CCNNNNNNNGG	4 cut(s)	335, 1141, 1270, 1563
AflII	CTTAAG	1 cut(s)	241
AflIII	ACRYGT	1 cut(s)	861
AgsI	TTSAA	8 cut(s)	22, 290, 371, 726, 776, 834, 859, 1633
AhlI	ACTAGT	2 cut(s)	143, 332
AjiI	CACGTC	1 cut(s)	874
AjnI	CCWGG	1 cut(s)	1489
AluBI	AGCT	6 cut(s)	698, 749, 816, 983, 1280, 1322
AluI	AGCT	6 cut(s)	698, 749, 816, 983, 1280, 1322
Alw26I	GTCTC	3 cut(s)	864, 1232, 1781
AlwI	GGATC	2 cut(s)	634, 1383
AlwNI	CAGNNNCTG	1 cut(s)	1322
AoxI	GGCC	5 cut(s)	199, 302, 1465, 1492, 1700
ApeKI	GCWGC	4 cut(s)	582, 980, 1145, 1574
ApoI	RAATTY	5 cut(s)	291, 636, 673, 1190, 1202
Asp700I	GAANNNNTTC	1 cut(s)	1457
AspLEI	GCGC	3 cut(s)	215, 976, 1398
AspS9I	GGNCC	2 cut(s)	199, 1606
AsuC2I	CCSGG	1 cut(s)	1604
AsuHPI	GGTGA	3 cut(s)	272, 413, 491
AvaII	GGWCC	1 cut(s)	1606
BalI	TGGCCA	1 cut(s)	1494
BanI	GGYRCC	2 cut(s)	950, 1740
BanII	GRGCYC	1 cut(s)	1482
BauI	CACGAG	1 cut(s)	390
BbsI	GAAGAC	2 cut(s)	1119, 1210
BbvI	GCAGC	4 cut(s)	569, 992, 1132, 1561
BccI	CCATC	4 cut(s)	389, 1045, 1264, 1695
BceAI	ACGGC	2 cut(s)	525, 699
BciT130I	CCWGG	1 cut(s)	1491
BclI	TGATCA	1 cut(s)	568
BcnI	CCSGG	1 cut(s)	1604
BcoDI	GTCTC	3 cut(s)	864, 1232, 1781
BcuI	ACTAGT	2 cut(s)	143, 332
BfaI	CTAG	7 cut(s)	41, 144, 333, 549, 699, 750, 867
BfmI	CTRYAG	1 cut(s)	513
BfoI	RGCGCY	1 cut(s)	1399
BfrI	CTTAAG	1 cut(s)	241
BglI	GCCNNNNNGGC	1 cut(s)	1393
BisI	GCNGC	5 cut(s)	583, 981, 1146, 1575, 1700
BlsI	GCNGC	5 cut(s)	584, 982, 1147, 1576, 1701
Bme1390I	CCNGG	2 cut(s)	1491, 1604
Bme18I	GGWCC	1 cut(s)	1606
BmgBI	CACGTC	1 cut(s)	874
BmgT120I	GGNCC	2 cut(s)	199, 1606
BmiI	GGNNCC	5 cut(s)	952, 1290, 1444, 1607, 1742
BmrFI	CCNGG	2 cut(s)	1491, 1604
BmrI	ACTGGG	1 cut(s)	1173
BmsI	GCATC	6 cut(s)	490, 744, 909, 1317, 1344, 1652
BmuI	ACTGGG	1 cut(s)	1173
BpiI	GAAGAC	2 cut(s)	1119, 1210
BplI	GAGNNNNNCTC	2 cut(s)	1062, 1094
BpuEI	CTTGAG	4 cut(s)	151, 1490, 1610, 1752
BpuMI	CCSGG	1 cut(s)	1604
BsaBI	GATNNNNATC	1 cut(s)	899
BsaI	GGTCTC	1 cut(s)	1781
BsaJI	CCNNGG	3 cut(s)	351, 1462, 1489
BsaXI	ACNNNNNCTCC	2 cut(s)	1086, 1116
Bsc4I	CCNNNNNNNGG	4 cut(s)	335, 1141, 1270, 1563
Bse118I	RCCGGY	1 cut(s)	953
Bse1I	ACTGG	4 cut(s)	10, 239, 890, 1168
Bse3DI	GCAATG	2 cut(s)	279, 384
Bse8I	GATNNNNATC	1 cut(s)	899
BseBI	CCWGG	1 cut(s)	1491
BseDI	CCNNGG	3 cut(s)	351, 1462, 1489
BseGI	GGATG	5 cut(s)	82, 759, 1037, 1335, 1643
BseJI	GATNNNNATC	1 cut(s)	899
BseLI	CCNNNNNNNGG	4 cut(s)	335, 1141, 1270, 1563
BseMI	GCAATG	2 cut(s)	279, 384
BseMII	CTCAG	4 cut(s)	135, 391, 606, 1429
BseNI	ACTGG	4 cut(s)	10, 239, 890, 1168
BseXI	GCAGC	4 cut(s)	569, 992, 1132, 1561
Bsh1236I	CGCG	1 cut(s)	976
BshFI	GGCC	5 cut(s)	201, 304, 1467, 1494, 1702
BshNI	GGYRCC	2 cut(s)	950, 1740
BsiSI	CCGG	3 cut(s)	954, 1373, 1603
BslFI	GGGAC	4 cut(s)	524, 632, 1180, 1580
BslI	CCNNNNNNNGG	4 cut(s)	335, 1141, 1270, 1563
BsmAI	GTCTC	3 cut(s)	864, 1232, 1781
BsmBI	CGTCTC	1 cut(s)	864
BsmFI	GGGAC	4 cut(s)	524, 632, 1180, 1580
BsmI	GAATGC	2 cut(s)	992, 1552
BsnI	GGCC	5 cut(s)	201, 304, 1467, 1494, 1702
Bso31I	GGTCTC	1 cut(s)	1781
Bsp1286I	GDGCHC	1 cut(s)	1482
Bsp143I	GATC	7 cut(s)	217, 568, 626, 690, 778, 848, 1375
BspACI	CCGC	4 cut(s)	533, 976, 1363, 1699
BspANI	GGCC	5 cut(s)	201, 304, 1467, 1494, 1702
BspCNI	CTCAG	4 cut(s)	134, 390, 605, 1428
BspFNI	CGCG	1 cut(s)	976
BspHI	TCATGA	3 cut(s)	669, 1008, 1266
BspLI	GGNNCC	5 cut(s)	952, 1290, 1444, 1607, 1742
BspPI	GGATC	2 cut(s)	634, 1383
BspT107I	GGYRCC	2 cut(s)	950, 1740
BspTI	CTTAAG	1 cut(s)	241
BspTNI	GGTCTC	1 cut(s)	1781
BsrDI	GCAATG	2 cut(s)	279, 384
BsrFI	RCCGGY	1 cut(s)	953
BsrI	ACTGG	4 cut(s)	10, 239, 890, 1168
BssAI	RCCGGY	1 cut(s)	953
BssECI	CCNNGG	3 cut(s)	351, 1462, 1489
BssMI	GATC	7 cut(s)	217, 568, 626, 690, 778, 848, 1375
BssNAI	GTATAC	1 cut(s)	14
BssSI	CACGAG	1 cut(s)	390
Bst1107I	GTATAC	1 cut(s)	14
Bst2BI	CACGAG	1 cut(s)	390
Bst2UI	CCWGG	1 cut(s)	1491
Bst4CI	ACNGT	3 cut(s)	100, 406, 487
Bst6I	CTCTTC	3 cut(s)	153, 467, 1755
BstAFI	CTTAAG	1 cut(s)	241
BstAPI	GCANNNNNTGC	1 cut(s)	971
BstC8I	GCNNGC	2 cut(s)	814, 978
BstDEI	CTNAG	4 cut(s)	121, 377, 592, 1415
BstF5I	GGATG	5 cut(s)	82, 759, 1037, 1335, 1643
BstFNI	CGCG	1 cut(s)	976
BstH2I	RGCGCY	1 cut(s)	1399
BstHHI	GCGC	3 cut(s)	215, 976, 1398
BstKTI	GATC	7 cut(s)	220, 571, 629, 693, 781, 851, 1378
BstMAI	GTCTC	3 cut(s)	864, 1232, 1781
BstMBI	GATC	7 cut(s)	217, 568, 626, 690, 778, 848, 1375
BstMWI	GCNNNNNNNGC	9 cut(s)	50, 219, 509, 740, 971, 980, 989, 1393, 1583
BstNI	CCWGG	1 cut(s)	1491
BstNSI	RCATGY	1 cut(s)	865
BstSCI	CCNGG	2 cut(s)	1489, 1602
BstSFI	CTRYAG	1 cut(s)	513
BstUI	CGCG	1 cut(s)	976
BstV1I	GCAGC	4 cut(s)	569, 992, 1132, 1561
BstV2I	GAAGAC	2 cut(s)	1119, 1210
BstX2I	RGATCY	2 cut(s)	626, 1375
BstYI	RGATCY	2 cut(s)	626, 1375
BstZ17I	GTATAC	1 cut(s)	14
BsuRI	GGCC	5 cut(s)	201, 304, 1467, 1494, 1702
BtrI	CACGTC	1 cut(s)	874
BtsCI	GGATG	5 cut(s)	82, 759, 1037, 1335, 1643
BtsIMutI	CAGTG	2 cut(s)	92, 617
Cac8I	GCNNGC	2 cut(s)	814, 978
CaiI	CAGNNNCTG	1 cut(s)	1322
CciI	TCATGA	3 cut(s)	669, 1008, 1266
CfoI	GCGC	3 cut(s)	215, 976, 1398
Cfr10I	RCCGGY	1 cut(s)	953
Cfr13I	GGNCC	2 cut(s)	199, 1606
Csp6I	GTAC	3 cut(s)	730, 930, 1600
CviQI	GTAC	3 cut(s)	730, 930, 1600
DdeI	CTNAG	4 cut(s)	121, 377, 592, 1415
DpnI	GATC	7 cut(s)	219, 570, 628, 692, 780, 850, 1377
DpnII	GATC	7 cut(s)	217, 568, 626, 690, 778, 848, 1375
DrdI	GACNNNNNNGTC	1 cut(s)	1018
DseDI	GACNNNNNNGTC	1 cut(s)	1018
EaeI	YGGCCR	1 cut(s)	1492
Eam1104I	CTCTTC	3 cut(s)	153, 467, 1755
EarI	CTCTTC	3 cut(s)	153, 467, 1755
Eco147I	AGGCCT	1 cut(s)	304
Eco24I	GRGCYC	1 cut(s)	1482
Eco31I	GGTCTC	1 cut(s)	1781
Eco47I	GGWCC	1 cut(s)	1606
Eco57I	CTGAAG	3 cut(s)	549, 1207, 1693
EcoO109I	RGGNCCY	1 cut(s)	1606
EcoRI	GAATTC	1 cut(s)	636
EcoRII	CCWGG	1 cut(s)	1489
EcoT22I	ATGCAT	1 cut(s)	902
EcoT38I	GRGCYC	1 cut(s)	1482
Esp3I	CGTCTC	1 cut(s)	864
FalI	AAGNNNNNCTT	6 cut(s)	687, 719, 838, 870, 1442, 1474
FaqI	GGGAC	4 cut(s)	524, 632, 1180, 1580
FauI	CCCGC	2 cut(s)	526, 969
FbaI	TGATCA	1 cut(s)	568
FblI	GTMKAC	1 cut(s)	13
Fnu4HI	GCNGC	5 cut(s)	583, 981, 1146, 1575, 1700
FokI	GGATG	5 cut(s)	89, 766, 1024, 1322, 1630
FriOI	GRGCYC	1 cut(s)	1482
Fsp4HI	GCNGC	5 cut(s)	583, 981, 1146, 1575, 1700
FspBI	CTAG	7 cut(s)	41, 144, 333, 549, 699, 750, 867
FspI	TGCGCA	1 cut(s)	214
GlaI	GCGC	3 cut(s)	214, 975, 1397
GluI	GCNGC	5 cut(s)	583, 981, 1146, 1575, 1700
HaeII	RGCGCY	1 cut(s)	1399
HaeIII	GGCC	5 cut(s)	201, 304, 1467, 1494, 1702
HapII	CCGG	3 cut(s)	954, 1373, 1603
HhaI	GCGC	3 cut(s)	215, 976, 1398
Hin6I	GCGC	3 cut(s)	213, 974, 1396
HinP1I	GCGC	3 cut(s)	213, 974, 1396
HinfI	GANTC	1 cut(s)	1326
HpaII	CCGG	3 cut(s)	954, 1373, 1603
HphI	GGTGA	3 cut(s)	272, 413, 491
Hpy166II	GTNNAC	2 cut(s)	14, 421
Hpy188I	TCNGA	9 cut(s)	297, 380, 497, 568, 595, 845, 1197, 1659, 1712
Hpy8I	GTNNAC	2 cut(s)	14, 421
HpyAV	CCTTC	6 cut(s)	173, 1051, 1713, 1717, 1740, 1766
HpyCH4III	ACNGT	3 cut(s)	100, 406, 487
HpyCH4IV	ACGT	3 cut(s)	873, 945, 1598
HpyF10VI	GCNNNNNNNGC	9 cut(s)	50, 219, 509, 740, 971, 980, 989, 1393, 1583
HpyF3I	CTNAG	4 cut(s)	121, 377, 592, 1415
HpySE526I	ACGT	3 cut(s)	873, 945, 1598
HspAI	GCGC	3 cut(s)	213, 974, 1396
Ksp22I	TGATCA	1 cut(s)	568
Kzo9I	GATC	7 cut(s)	217, 568, 626, 690, 778, 848, 1375
LmnI	GCTCC	4 cut(s)	846, 1319, 1442, 1549
Lsp1109I	GCAGC	4 cut(s)	569, 992, 1132, 1561
LweI	GCATC	6 cut(s)	490, 744, 909, 1317, 1344, 1652
MaeI	CTAG	7 cut(s)	41, 144, 333, 549, 699, 750, 867
MaeII	ACGT	3 cut(s)	873, 945, 1598
MaeIII	GTNAC	4 cut(s)	64, 607, 1522, 1594
MalI	GATC	7 cut(s)	219, 570, 628, 692, 780, 850, 1377
MboI	GATC	7 cut(s)	217, 568, 626, 690, 778, 848, 1375
MflI	RGATCY	2 cut(s)	626, 1375
MhlI	GDGCHC	1 cut(s)	1482
MlsI	TGGCCA	1 cut(s)	1494
MluNI	TGGCCA	1 cut(s)	1494
MmeI	TCCRAC	3 cut(s)	164, 1140, 1758
Mox20I	TGGCCA	1 cut(s)	1494
Mph1103I	ATGCAT	1 cut(s)	902
MroXI	GAANNNNTTC	1 cut(s)	1457
MscI	TGGCCA	1 cut(s)	1494
MseI	TTAA	3 cut(s)	242, 890, 1619
MslI	CAYNNNNRTG	4 cut(s)	786, 1250, 1271, 1340
Msp20I	TGGCCA	1 cut(s)	1494
MspCI	CTTAAG	1 cut(s)	241
MspI	CCGG	3 cut(s)	954, 1373, 1603
MspR9I	CCNGG	2 cut(s)	1491, 1604
Mva1269I	GAATGC	2 cut(s)	992, 1552
MvaI	CCWGG	1 cut(s)	1491
MvnI	CGCG	1 cut(s)	976
MwoI	GCNNNNNNNGC	9 cut(s)	50, 219, 509, 740, 971, 980, 989, 1393, 1583
NciI	CCSGG	1 cut(s)	1604
NdeII	GATC	7 cut(s)	217, 568, 626, 690, 778, 848, 1375
NlaIV	GGNNCC	5 cut(s)	952, 1290, 1444, 1607, 1742
NmeAIII	GCCGAG	2 cut(s)	332, 1443
NmuCI	GTSAC	2 cut(s)	64, 1522
NsbI	TGCGCA	1 cut(s)	214
NsiI	ATGCAT	1 cut(s)	902
NspI	RCATGY	1 cut(s)	865
PagI	TCATGA	3 cut(s)	669, 1008, 1266
PceI	AGGCCT	1 cut(s)	304
PciI	ACATGT	1 cut(s)	861
PctI	GAATGC	2 cut(s)	992, 1552
PdmI	GAANNNNTTC	1 cut(s)	1457
PfeI	GAWTC	1 cut(s)	1326
PflMI	CCANNNNNTGG	1 cut(s)	1563
PkrI	GCNGC	5 cut(s)	584, 982, 1147, 1576, 1701
PpuMI	RGGWCCY	1 cut(s)	1606
PscI	ACATGT	1 cut(s)	861
Psp5II	RGGWCCY	1 cut(s)	1606
Psp6I	CCWGG	1 cut(s)	1489
PspGI	CCWGG	1 cut(s)	1489
PspN4I	GGNNCC	5 cut(s)	952, 1290, 1444, 1607, 1742
PspPI	GGNCC	2 cut(s)	199, 1606
PspPPI	RGGWCCY	1 cut(s)	1606
PstNI	CAGNNNCTG	1 cut(s)	1322
PsuI	RGATCY	2 cut(s)	626, 1375
RsaI	GTAC	3 cut(s)	731, 931, 1601
RsaNI	GTAC	3 cut(s)	730, 930, 1600
RseI	CAYNNNNRTG	4 cut(s)	786, 1250, 1271, 1340
SaqAI	TTAA	3 cut(s)	242, 890, 1619
SatI	GCNGC	5 cut(s)	583, 981, 1146, 1575, 1700
Sau3AI	GATC	7 cut(s)	217, 568, 626, 690, 778, 848, 1375
Sau96I	GGNCC	2 cut(s)	199, 1606
ScrFI	CCNGG	2 cut(s)	1491, 1604
SduI	GDGCHC	1 cut(s)	1482
SfaNI	GCATC	6 cut(s)	490, 744, 909, 1317, 1344, 1652
SfcI	CTRYAG	1 cut(s)	513
SinI	GGWCC	1 cut(s)	1606
SmiMI	CAYNNNNRTG	4 cut(s)	786, 1250, 1271, 1340
SmlI	CTYRAG	5 cut(s)	130, 241, 1469, 1625, 1767
SmoI	CTYRAG	5 cut(s)	130, 241, 1469, 1625, 1767
SpeI	ACTAGT	2 cut(s)	143, 332
SseBI	AGGCCT	1 cut(s)	304
SsiI	CCGC	4 cut(s)	533, 976, 1363, 1699
SspMI	CTAG	7 cut(s)	41, 144, 333, 549, 699, 750, 867
StuI	AGGCCT	1 cut(s)	304
StyD4I	CCNGG	2 cut(s)	1489, 1602
TaaI	ACNGT	3 cut(s)	100, 406, 487
TaiI	ACGT	3 cut(s)	876, 948, 1601
TaqI	TCGA	2 cut(s)	1069, 1476
TauI	GCSGC	1 cut(s)	1702
TfiI	GAWTC	1 cut(s)	1326
Tru1I	TTAA	3 cut(s)	242, 890, 1619
Tru9I	TTAA	3 cut(s)	242, 890, 1619
TscAI	CASTG	2 cut(s)	99, 624
TseFI	GTSAC	2 cut(s)	64, 1522
TseI	GCWGC	4 cut(s)	582, 980, 1145, 1574
Tsp45I	GTSAC	2 cut(s)	64, 1522
TspRI	CASTG	2 cut(s)	99, 624
Van91I	CCANNNNNTGG	1 cut(s)	1563
Vha464I	CTTAAG	1 cut(s)	241
VpaK11BI	GGWCC	1 cut(s)	1606
XapI	RAATTY	5 cut(s)	291, 636, 673, 1190, 1202
XbaI	TCTAGA	1 cut(s)	866
XceI	RCATGY	1 cut(s)	865
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1300
XmiI	GTMKAC	1 cut(s)	13
XmnI	GAANNNNTTC	1 cut(s)	1457
XspI	CTAG	7 cut(s)	41, 144, 333, 549, 699, 750, 867
Zsp2I	ATGCAT	1 cut(s)	902

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.