Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0012467

Physical Location & Seq

Genomic Coordinates Forward (+)

19796596 .. 19800655

Gene Structure 4060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1093300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGCAGAAACTGCTGCGCATAAGCTCATCAGGCCCCATTCACTGCACATCGCCTAAGGCCGCCCCTTTTTCTTATCCTATCCCCTTTGCCTCAAACTTTCTATCCAAAGCTCTCACCGACTCACCTTCAAGAATGCACACTGCTGCAACCGCAGCTTTTACCTCCGCCGCCGGCGTCTCCGGCTCAGCCCTCGCCGCTACTATTCACAACAAACCCGCTTCCAGTACTCCCCTCTCTCGCTTCAACTGCGGCCTCTGCCAATGCCCTGTCTCTGTGGGCGGCAGATCCCCGTCCCGGGCTTGGCTTGTCCTTAAAGACTCGGGCTTGGGGTCCCGCCCGGCGTGGCTGCATACGAGCTCTGATGGGTCATTTTCTGTTTCCGCTGCCGAGGGTTGCGGGGGGTTAGAAGAGGGTTTTGAGGGTTTGGGCAGTGGCGCTGGTGAAAACCCAGAAAAGGGTTCGGGGGAGCAGAAGCCGAATAGGTTGAATCGGAGACAAAGGGGCTCCGTGGACGGTGGTTTGTTGGCCGGAAACCCGGACTTGTTGGCTATTCCTGGCGTGGGGCCAAGGAACTTGAGGAAGCTGGTGGAAAAGGGTATTGGGGGAGTTGCCGAGCTCAAGCAATTGTATAGAGATAAGTTCTTTGGAAAATCTAGTGAGAAGATGGTTGAGTTCTTACAAAGTTCTGTAGGAATCATCCACAAAAACCATGCTGAGAGTATTACTACTTATATTAAAGAGACTGTTGATGAAGAGTCAAAAGAGGACATCTCTAACTCGGAACCAAAGCTAATGCAGAAGAAAAGATTTACTATTTGCGTTGAAGGAAATATCAGCGTTGGAAAGTCAACATTTCTTCAGAGAATAGCAAATGAAACACTCGAGTTAAGAGATATTGTTGAGGTGGTTCCAGAACCTATTGATAAGTGGCAGGATGTTGGACCTGACCATTTTAATATATTGGATGCTTTCTATGCTCATCCAGAGAGATATGCCTACACCTTCCAGAATTATGTTTTTGTTACAAGGTTGATGCAGGAGAGAGAATCGTCTGGTGGTATCAAGCCCCTCCGGTTGATGGAAAGGAGTGTTTTTAGTGACAGGATGGTTTTTGTTCGAGCGGTTCATGAAGCGAAATGGATGAATGAGATGGAGATCAGTATCTATGACTCATGGTTTGACCCAGTTGTATCATCCTTGCCCGGGCTTGTCCCTGATGCTTTCATATATCTTAGAGCAAGTCCTGACACTTGTCACCAGAGAATGAAGCTACGCAAGAGAGCAGAGGAAGATCAAGTCAGCCTAGAGTATCTCCGCGGTTTACATGAAAAGCATGAAAGCTGGCTCTTCCCATTTGAGAGTGGCAATCATGGTGTATTGTCCGTTAGTAAGCCTGCCTTGCACATAGACAGCAGATTACCTCCTGATATCAGGGACCGTGTGTTCTATTTGCAGGGTGATCATATGCATTCAAGCATTCAGAAGGTTCCTGCTTTGGTTCTTGACTGTGAGCCAAACATTGATTTTAACAAAGACATTGACGCAAAGAGGCAGTATGCTCGTCAAGTAGCGGAGTTTTTTGAGTTTGTGAAGAAAACACAAGAAGTTCCATCAGGAAATAGTTGTGCAGAAGCCAAGAAGAGTAGCCAACAACAAATACTGCTGCCACGAAATGGAGAATTATGGGTTCCTGATAAGCATTTTCCTGGGTCAGCTCTCAAATCTTTGGATTTTAGGCGAGCCATGTCTTTCTTGTCTGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004137 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006213 GO:0006220 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009116 GO:0009117 GO:0009123 GO:0009124 GO:0009157 GO:0009162 GO:0009163 GO:0009165 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019136 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0034404 GO:0034641 GO:0034654 GO:0042802 GO:0042803 GO:0043094 GO:0043097 GO:0043101 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046134 GO:0046483 GO:0046983 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

dNK

Protein Analysis

588

Amino Acids

65.09

Weight (kDa)

7.99

Isoelectric Point (pI)

53.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
dNK	PF01712	272 - 526	1.1e-49	Deoxynucleoside kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012467)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72040
fragaria_vesca	FvH4_5g32350 FvH4_5g32350
malus_domestica	MD05G1093300.v1.1 MD10G1100400.v1.1
prunus_persica	Prupe.1G551200_v2.0.a1
pyrus_communis	pycom05g09240 pycom10g08620
rosa_chinensis	RchiOBHm_Chr7g0228851
rosa_laevigata	RLG00000001541
rosa_multiflora	Rmu_sc0004517.1_g000003 Rmu_sc0011218.1_g000004 Rmu_sc0013945.1_g000008
rosa_rugosa	Rorug07G0252300
rosa_samantha	Rh7AG405600 Rh7BG384900 Rh7CG423200 Rh7DG399600
rosa_wichuraiana	Rw7G033600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	17
AccB7I	CCANNNNNTGG	1 cut(s)	1673
AccBSI	CCGCTC	1 cut(s)	1121
AccII	CGCG	1 cut(s)	1317
AclWI	GGATC	1 cut(s)	279
AcoI	YGGCCR	1 cut(s)	525
AcuI	CTGAAG	1 cut(s)	842
AcyI	GRCGYC	1 cut(s)	174
AfaI	GTAC	1 cut(s)	226
AfiI	CCNNNNNNNGG	9 cut(s)	294, 295, 300, 454, 455, 560, 1078, 1203, 1673
AgsI	TTSAA	5 cut(s)	129, 244, 487, 824, 1473
AjnI	CCWGG	2 cut(s)	553, 1705
AjuI	GAANNNNNNNTTGG	2 cut(s)	582, 614
AloI	GAACNNNNNNTCC	2 cut(s)	1427, 1459
Alw21I	GWGCWC	2 cut(s)	359, 618
Alw26I	GTCTC	4 cut(s)	181, 274, 487, 734
AlwI	GGATC	1 cut(s)	279
AlwNI	CAGNNNCTG	1 cut(s)	10
Ama87I	CYCGRG	4 cut(s)	294, 319, 881, 1202
AoxI	GGCC	5 cut(s)	31, 57, 250, 525, 563
ApeKI	GCWGC	6 cut(s)	13, 143, 152, 346, 383, 1663
ArsI	GACNNNNNNTTYG	2 cut(s)	1160, 1192
AspLEI	GCGC	2 cut(s)	18, 437
AspS9I	GGNCC	5 cut(s)	32, 330, 563, 941, 1435
AsuC2I	CCSGG	6 cut(s)	295, 296, 338, 536, 1203, 1204
AsuHPI	GGTGA	5 cut(s)	106, 114, 452, 1247, 1469
AvaI	CYCGRG	4 cut(s)	294, 319, 881, 1202
AvaII	GGWCC	3 cut(s)	330, 941, 1435
AxyI	CCTNAGG	1 cut(s)	54
BanII	GRGCYC	3 cut(s)	359, 506, 618
Bbv12I	GWGCWC	2 cut(s)	359, 618
BbvI	GCAGC	5 cut(s)	130, 164, 333, 370, 1650
BccI	CCATC	6 cut(s)	356, 658, 1072, 1099, 1144, 1618
BcgI	CGANNNNNNTGC	2 cut(s)	1541, 1575
BciT130I	CCWGG	2 cut(s)	555, 1707
BclI	TGATCA	1 cut(s)	1459
BcnI	CCSGG	6 cut(s)	295, 296, 338, 536, 1203, 1204
BcoDI	GTCTC	4 cut(s)	181, 274, 487, 734
BfaI	CTAG	3 cut(s)	654, 1304, 1762
BfmI	CTRYAG	1 cut(s)	687
BfoI	RGCGCY	1 cut(s)	438
BlpI	GCTNAGC	1 cut(s)	184
BmcAI	AGTACT	1 cut(s)	226
Bme1390I	CCNGG	8 cut(s)	295, 296, 338, 536, 555, 1203, 1204, 1707
Bme18I	GGWCC	3 cut(s)	330, 941, 1435
BmeT110I	CYCGRG	4 cut(s)	294, 319, 881, 1202
BmgT120I	GGNCC	5 cut(s)	32, 330, 563, 941, 1435
BmrFI	CCNGG	8 cut(s)	295, 296, 338, 536, 555, 1203, 1204, 1707
BmrI	ACTGGG	1 cut(s)	1178
BmsI	GCATC	3 cut(s)	955, 1023, 1207
BmuI	ACTGGG	1 cut(s)	1178
BoxI	GACNNNNGTC	1 cut(s)	1251
BplI	GAGNNNNNCTC	2 cut(s)	755, 787
Bpu1102I	GCTNAGC	1 cut(s)	184
BpuEI	CTTGAG	2 cut(s)	595, 602
BpuMI	CCSGG	6 cut(s)	295, 296, 338, 536, 1203, 1204
BsaBI	GATNNNNATC	2 cut(s)	1154, 1160
BsaHI	GRCGYC	1 cut(s)	174
BsaJI	CCNNGG	7 cut(s)	294, 387, 507, 566, 1202, 1315, 1706
BsaWI	WCCGGW	1 cut(s)	1071
Bsc4I	CCNNNNNNNGG	9 cut(s)	294, 295, 300, 454, 455, 560, 1078, 1203, 1673
Bse118I	RCCGGY	1 cut(s)	170
Bse1I	ACTGG	2 cut(s)	222, 1184
Bse21I	CCTNAGG	1 cut(s)	54
Bse8I	GATNNNNATC	2 cut(s)	1154, 1160
BseBI	CCWGG	2 cut(s)	555, 1707
BseDI	CCNNGG	7 cut(s)	294, 387, 507, 566, 1202, 1315, 1706
BseGI	GGATG	7 cut(s)	696, 940, 970, 979, 1110, 1146, 1193
BseJI	GATNNNNATC	2 cut(s)	1154, 1160
BseLI	CCNNNNNNNGG	9 cut(s)	294, 295, 300, 454, 455, 560, 1078, 1203, 1673
BseMII	CTCAG	2 cut(s)	198, 705
BseNI	ACTGG	2 cut(s)	222, 1184
BseXI	GCAGC	5 cut(s)	130, 164, 333, 370, 1650
BsgI	GTGCAG	2 cut(s)	28, 1647
Bsh1236I	CGCG	1 cut(s)	1317
BshFI	GGCC	5 cut(s)	33, 59, 252, 527, 565
BsiHKAI	GWGCWC	2 cut(s)	359, 618
BsiHKCI	CYCGRG	4 cut(s)	294, 319, 881, 1202
BsiSI	CCGG	8 cut(s)	171, 180, 295, 338, 528, 536, 1072, 1203
BslFI	GGGAC	4 cut(s)	277, 316, 1196, 1448
BslI	CCNNNNNNNGG	9 cut(s)	294, 295, 300, 454, 455, 560, 1078, 1203, 1673
BsmAI	GTCTC	4 cut(s)	181, 274, 487, 734
BsmBI	CGTCTC	1 cut(s)	181
BsmFI	GGGAC	4 cut(s)	277, 316, 1196, 1448
BsmI	GAATGC	3 cut(s)	138, 1468, 1476
BsnI	GGCC	5 cut(s)	33, 59, 252, 527, 565
BsoBI	CYCGRG	4 cut(s)	294, 319, 881, 1202
Bsp1286I	GDGCHC	3 cut(s)	359, 506, 618
Bsp143I	GATC	4 cut(s)	284, 1155, 1291, 1459
Bsp1720I	GCTNAGC	1 cut(s)	184
BspANI	GGCC	5 cut(s)	33, 59, 252, 527, 565
BspCNI	CTCAG	2 cut(s)	197, 706
BspFNI	CGCG	1 cut(s)	1317
BspHI	TCATGA	1 cut(s)	1126
BspPI	GGATC	1 cut(s)	279
BspQI	GCTCTTC	1 cut(s)	1352
BsrBI	CCGCTC	1 cut(s)	1121
BsrFI	RCCGGY	1 cut(s)	170
BsrI	ACTGG	2 cut(s)	222, 1184
BssAI	RCCGGY	1 cut(s)	170
BssECI	CCNNGG	7 cut(s)	294, 387, 507, 566, 1202, 1315, 1706
BssMI	GATC	4 cut(s)	284, 1155, 1291, 1459
BssNI	GRCGYC	1 cut(s)	174
BssT1I	CCWWGG	1 cut(s)	566
Bst2UI	CCWGG	2 cut(s)	555, 1707
Bst4CI	ACNGT	4 cut(s)	515, 745, 1439, 1508
Bst6I	CTCTTC	4 cut(s)	402, 747, 1352, 1634
BstACI	GRCGYC	1 cut(s)	174
BstAPI	GCANNNNNTGC	1 cut(s)	10
BstC8I	GCNNGC	4 cut(s)	172, 1343, 1395, 1740
BstDEI	CTNAG	4 cut(s)	54, 184, 714, 1232
BstDSI	CCRYGG	2 cut(s)	507, 1315
BstF5I	GGATG	7 cut(s)	696, 940, 970, 979, 1110, 1146, 1193
BstFNI	CGCG	1 cut(s)	1317
BstH2I	RGCGCY	1 cut(s)	438
BstHHI	GCGC	2 cut(s)	18, 437
BstKTI	GATC	4 cut(s)	287, 1158, 1294, 1462
BstMAI	GTCTC	4 cut(s)	181, 274, 487, 734
BstMBI	GATC	4 cut(s)	284, 1155, 1291, 1459
BstNI	CCWGG	2 cut(s)	555, 1707
BstPAI	GACNNNNGTC	1 cut(s)	1251
BstSCI	CCNGG	8 cut(s)	293, 294, 336, 534, 553, 1201, 1202, 1705
BstSFI	CTRYAG	1 cut(s)	687
BstUI	CGCG	1 cut(s)	1317
BstV1I	GCAGC	5 cut(s)	130, 164, 333, 370, 1650
BstX2I	RGATCY	1 cut(s)	284
BstYI	RGATCY	1 cut(s)	284
Bsu36I	CCTNAGG	1 cut(s)	54
BsuRI	GGCC	5 cut(s)	33, 59, 252, 527, 565
BtgI	CCRYGG	2 cut(s)	507, 1315
BtgZI	GCGATG	1 cut(s)	33
BtsCI	GGATG	7 cut(s)	696, 940, 970, 979, 1110, 1146, 1193
BtsI	GCAGTG	3 cut(s)	40, 138, 436
BtsIMutI	CAGTG	3 cut(s)	40, 138, 436
Cac8I	GCNNGC	4 cut(s)	172, 1343, 1395, 1740
CaiI	CAGNNNCTG	1 cut(s)	10
CciI	TCATGA	1 cut(s)	1126
CfoI	GCGC	2 cut(s)	18, 437
Cfr10I	RCCGGY	1 cut(s)	170
Cfr13I	GGNCC	5 cut(s)	32, 330, 563, 941, 1435
Cfr42I	CCGCGG	1 cut(s)	1318
Cfr9I	CCCGGG	2 cut(s)	294, 1202
CseI	GACGC	2 cut(s)	163, 1550
Csp6I	GTAC	1 cut(s)	225
CviAII	CATG	7 cut(s)	710, 1127, 1173, 1325, 1334, 1370, 1744
CviQI	GTAC	1 cut(s)	225
DdeI	CTNAG	4 cut(s)	54, 184, 714, 1232
DpnI	GATC	4 cut(s)	286, 1157, 1293, 1461
DpnII	GATC	4 cut(s)	284, 1155, 1291, 1459
EaeI	YGGCCR	1 cut(s)	525
Eam1104I	CTCTTC	4 cut(s)	402, 747, 1352, 1634
EarI	CTCTTC	4 cut(s)	402, 747, 1352, 1634
EciI	GGCGGA	1 cut(s)	154
Ecl136II	GAGCTC	2 cut(s)	357, 616
Eco130I	CCWWGG	1 cut(s)	566
Eco24I	GRGCYC	3 cut(s)	359, 506, 618
Eco32I	GATATC	1 cut(s)	1429
Eco47I	GGWCC	3 cut(s)	330, 941, 1435
Eco53kI	GAGCTC	2 cut(s)	357, 616
Eco57I	CTGAAG	1 cut(s)	842
Eco81I	CCTNAGG	1 cut(s)	54
Eco88I	CYCGRG	4 cut(s)	294, 319, 881, 1202
EcoICRI	GAGCTC	2 cut(s)	357, 616
EcoO109I	RGGNCCY	2 cut(s)	32, 330
EcoRII	CCWGG	2 cut(s)	553, 1705
EcoRV	GATATC	1 cut(s)	1429
EcoT14I	CCWWGG	1 cut(s)	566
EcoT22I	ATGCAT	1 cut(s)	1470
EcoT38I	GRGCYC	3 cut(s)	359, 506, 618
ErhI	CCWWGG	1 cut(s)	566
Esp3I	CGTCTC	1 cut(s)	181
FaeI	CATG	7 cut(s)	713, 1130, 1176, 1328, 1337, 1373, 1747
FalI	AAGNNNNNCTT	2 cut(s)	1382, 1414
FaqI	GGGAC	4 cut(s)	277, 316, 1196, 1448
FatI	CATG	7 cut(s)	709, 1126, 1172, 1324, 1333, 1369, 1743
FauI	CCCGC	3 cut(s)	223, 341, 389
FauNDI	CATATG	1 cut(s)	1464
FbaI	TGATCA	1 cut(s)	1459
FokI	GGATG	7 cut(s)	683, 947, 966, 977, 1117, 1153, 1180
FriOI	GRGCYC	3 cut(s)	359, 506, 618
FspBI	CTAG	3 cut(s)	654, 1304, 1762
FspI	TGCGCA	1 cut(s)	17
GlaI	GCGC	2 cut(s)	17, 436
HaeII	RGCGCY	1 cut(s)	438
HaeIII	GGCC	5 cut(s)	33, 59, 252, 527, 565
HapII	CCGG	8 cut(s)	171, 180, 295, 338, 528, 536, 1072, 1203
HgaI	GACGC	2 cut(s)	163, 1550
HhaI	GCGC	2 cut(s)	18, 437
Hin1I	GRCGYC	1 cut(s)	174
Hin1II	CATG	7 cut(s)	713, 1130, 1176, 1328, 1337, 1373, 1747
Hin6I	GCGC	2 cut(s)	16, 435
HinP1I	GCGC	2 cut(s)	16, 435
HincII	GTYRAC	1 cut(s)	849
HindII	GTYRAC	1 cut(s)	849
HinfI	GANTC	7 cut(s)	119, 317, 487, 693, 755, 1046, 1169
HpaII	CCGG	8 cut(s)	171, 180, 295, 338, 528, 536, 1072, 1203
HphI	GGTGA	5 cut(s)	106, 114, 452, 1247, 1469
Hpy166II	GTNNAC	3 cut(s)	511, 849, 1322
Hpy188I	TCNGA	5 cut(s)	361, 492, 781, 861, 1482
Hpy8I	GTNNAC	3 cut(s)	511, 849, 1322
HpyAV	CCTTC	4 cut(s)	135, 818, 1012, 1477
HpyCH4III	ACNGT	4 cut(s)	515, 745, 1439, 1508
HpyF3I	CTNAG	4 cut(s)	54, 184, 714, 1232
Hsp92I	GRCGYC	1 cut(s)	174
Hsp92II	CATG	7 cut(s)	713, 1130, 1176, 1328, 1337, 1373, 1747
HspAI	GCGC	2 cut(s)	16, 435
KflI	GGGWCCC	1 cut(s)	330
KroI	GCCGGC	1 cut(s)	170
KroNI	GCCGGC	1 cut(s)	172
Ksp22I	TGATCA	1 cut(s)	1459
KspI	CCGCGG	1 cut(s)	1318
Kzo9I	GATC	4 cut(s)	284, 1155, 1291, 1459
LguI	GCTCTTC	1 cut(s)	1352
LmnI	GCTCC	2 cut(s)	466, 509
Lsp1109I	GCAGC	5 cut(s)	130, 164, 333, 370, 1650
LweI	GCATC	3 cut(s)	955, 1023, 1207
MaeI	CTAG	3 cut(s)	654, 1304, 1762
MaeIII	GTNAC	3 cut(s)	1021, 1097, 1253
MalI	GATC	4 cut(s)	286, 1157, 1293, 1461
MbiI	CCGCTC	1 cut(s)	1121
MboI	GATC	4 cut(s)	284, 1155, 1291, 1459
MboII	GAAGA	9 cut(s)	419, 673, 764, 811, 848, 1301, 1339, 1603, 1651
MfeI	CAATTG	1 cut(s)	623
MflI	RGATCY	1 cut(s)	284
MhlI	GDGCHC	3 cut(s)	359, 506, 618
MluCI	AATT	3 cut(s)	623, 1009, 1679
MlyI	GAGTC	4 cut(s)	113, 311, 764, 1163
MmeI	TCCRAC	2 cut(s)	820, 919
Mph1103I	ATGCAT	1 cut(s)	1470
MreI	CGCCGGCG	1 cut(s)	170
MroNI	GCCGGC	1 cut(s)	170
MseI	TTAA	5 cut(s)	312, 735, 887, 954, 1527
MspA1I	CMGCKG	2 cut(s)	383, 1317
MspI	CCGG	8 cut(s)	171, 180, 295, 338, 528, 536, 1072, 1203
MspR9I	CCNGG	8 cut(s)	295, 296, 338, 536, 555, 1203, 1204, 1707
MunI	CAATTG	1 cut(s)	623
Mva1269I	GAATGC	3 cut(s)	138, 1468, 1476
MvaI	CCWGG	2 cut(s)	555, 1707
MvnI	CGCG	1 cut(s)	1317
NaeI	GCCGGC	1 cut(s)	172
NciI	CCSGG	6 cut(s)	295, 296, 338, 536, 1203, 1204
NdeI	CATATG	1 cut(s)	1464
NdeII	GATC	4 cut(s)	284, 1155, 1291, 1459
NgoMIV	GCCGGC	1 cut(s)	170
NlaIII	CATG	7 cut(s)	713, 1130, 1176, 1328, 1337, 1373, 1747
NmeAIII	GCCGAG	2 cut(s)	412, 637
NmuCI	GTSAC	2 cut(s)	1097, 1253
NsbI	TGCGCA	1 cut(s)	17
NsiI	ATGCAT	1 cut(s)	1470
PaeR7I	CTCGAG	1 cut(s)	881
PagI	TCATGA	1 cut(s)	1126
PciSI	GCTCTTC	1 cut(s)	1352
PctI	GAATGC	3 cut(s)	138, 1468, 1476
PdiI	GCCGGC	1 cut(s)	172
PfeI	GAWTC	3 cut(s)	487, 693, 1046
PflMI	CCANNNNNTGG	1 cut(s)	1673
PleI	GAGTC	4 cut(s)	113, 311, 763, 1163
PpsI	GAGTC	4 cut(s)	113, 311, 763, 1163
PpuMI	RGGWCCY	1 cut(s)	330
PshAI	GACNNNNGTC	1 cut(s)	1251
Psp124BI	GAGCTC	2 cut(s)	359, 618
Psp5II	RGGWCCY	1 cut(s)	330
Psp6I	CCWGG	2 cut(s)	553, 1705
PspGI	CCWGG	2 cut(s)	553, 1705
PspPI	GGNCC	5 cut(s)	32, 330, 563, 941, 1435
PspPPI	RGGWCCY	1 cut(s)	330
PspXI	VCTCGAGB	1 cut(s)	881
PstNI	CAGNNNCTG	1 cut(s)	10
PsuI	RGATCY	1 cut(s)	284
RsaI	GTAC	1 cut(s)	226
RsaNI	GTAC	1 cut(s)	225
SacI	GAGCTC	2 cut(s)	359, 618
SacII	CCGCGG	1 cut(s)	1318
SapI	GCTCTTC	1 cut(s)	1352
SaqAI	TTAA	5 cut(s)	312, 735, 887, 954, 1527
Sau3AI	GATC	4 cut(s)	284, 1155, 1291, 1459
Sau96I	GGNCC	5 cut(s)	32, 330, 563, 941, 1435
ScaI	AGTACT	1 cut(s)	226
SchI	GAGTC	4 cut(s)	113, 311, 764, 1163
ScrFI	CCNGG	8 cut(s)	295, 296, 338, 536, 555, 1203, 1204, 1707
SduI	GDGCHC	3 cut(s)	359, 506, 618
SfaNI	GCATC	3 cut(s)	955, 1023, 1207
SfcI	CTRYAG	1 cut(s)	687
Sfr274I	CTCGAG	1 cut(s)	881
Sfr303I	CCGCGG	1 cut(s)	1318
SgrAI	CRCCGGYG	1 cut(s)	170
SgrBI	CCGCGG	1 cut(s)	1318
SinI	GGWCC	3 cut(s)	330, 941, 1435
SlaI	CTCGAG	1 cut(s)	881
SmaI	CCCGGG	2 cut(s)	296, 1204
SmlI	CTYRAG	3 cut(s)	574, 617, 881
SmoI	CTYRAG	3 cut(s)	574, 617, 881
SrfI	GCCCGGGC	1 cut(s)	1204
Sse9I	AATT	3 cut(s)	623, 1009, 1679
SspMI	CTAG	3 cut(s)	654, 1304, 1762
SstI	GAGCTC	2 cut(s)	359, 618
StyD4I	CCNGG	8 cut(s)	293, 294, 336, 534, 553, 1201, 1202, 1705
StyI	CCWWGG	1 cut(s)	566
TaaI	ACNGT	4 cut(s)	515, 745, 1439, 1508
TaqI	TCGA	2 cut(s)	882, 1117
TasI	AATT	3 cut(s)	623, 1009, 1679
TatI	WGTACW	1 cut(s)	224
TauI	GCSGC	5 cut(s)	62, 170, 197, 252, 282
TfiI	GAWTC	3 cut(s)	487, 693, 1046
Tru1I	TTAA	5 cut(s)	312, 735, 887, 954, 1527
Tru9I	TTAA	5 cut(s)	312, 735, 887, 954, 1527
TscAI	CASTG	3 cut(s)	47, 145, 436
TseFI	GTSAC	2 cut(s)	1097, 1253
TseI	GCWGC	6 cut(s)	13, 143, 152, 346, 383, 1663
Tsp45I	GTSAC	2 cut(s)	1097, 1253
TspDTI	ATGAA	9 cut(s)	765, 888, 1115, 1143, 1157, 1213, 1280, 1341, 1350
TspGWI	ACGGA	2 cut(s)	496, 1372
TspMI	CCCGGG	2 cut(s)	294, 1202
TspRI	CASTG	3 cut(s)	47, 145, 436
Van91I	CCANNNNNTGG	1 cut(s)	1673
VpaK11BI	GGWCC	3 cut(s)	330, 941, 1435
XhoI	CTCGAG	1 cut(s)	881
XmaI	CCCGGG	2 cut(s)	294, 1202
XspI	CTAG	3 cut(s)	654, 1304, 1762
ZrmI	AGTACT	1 cut(s)	226
Zsp2I	ATGCAT	1 cut(s)	1470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.