Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0012467

Physical Location & Seq

Genomic Coordinates Reverse (-)

17226028 .. 17229549

Gene Structure 3522 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001541

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGCAGAAACTGCTTCGCATAAGCCCATCAGGCCCCATTCTATGCACTCACGTTAAGAAGCCTCCTCCCCCTTCTTCTTCTTCTTCTTCTACTCTCTCCTCTCTCGCTCGAGCTTTCAAGATCCCAACTTCCCAAATGCACACAGCTTCAGCCTTCCGCGGCCTCGCCGCCACCGTTTACAACAAACCCACTTCCGGCAACGTCCCCTCCTCCTCCTCCGCCCGCTTCAGCTGCACCCTCTGCCGCTGCTCCTCCAACAAGGCCCCGCTCCGGGCTTGGCCGCTGCTCAAAGACGCCGCCTTTTCTGGGTACCGGCAGGCGTGGCTTCACTCCGGCTCAGACGGGTCCTTTTCCGTTTCGGCCGCCGCGGAGGCTTCCAAGGGTTTGGAGCCAGAGAAGAGTGTAGATAAGGGTTTGGAGGAAGGAGAGGCCGGAAAGAGTTCCGAGGAGAAGCTGAGTAAGTTTAGTAGCAGTAGTACTAGTAGTAGTAGTACTAGGAGGCAGAGGGCTTCCGCCGGCGGCGGCTCAGTGGTGGCCGGAAATCCGGACTTGTTGGCTATTCCGGGTGTGGGGCCAAGGAACTTGAGGAAGCTGGTGGAGAAGGGTATTGGTGGAGTTGCTGAGCTCAAGCAGTTGTATAGAGATAAGTTCTTTGGAAAATCTAATGAGAGGATGGTTGAGTACTTACAAAGTTCGGTAGGAATCATCCACAAAAACCATGCTGAGAGTATAACGAGTTATATTAAAGAGAGTGTTGATGAGGAGTTGAAGGATGATAGTTCGAGCTCGGGAGGGAAGGCAGCCCAGAAGAAACGACTTACTTTCTGCGTTGAGGGAAATATCAGCGTGGGAAAGTCAACCTTTCTCAAGGAAATAGCAAACACTACGCTTGAGCTACAAGATCTTGTTGAGGTGGTTCAAGAACCTATTGACAAGTGGCAGGATATTGGACCTGACCATTTTAACATATTGAATGCTTTCTATGCTGAGCCACATCGGTATGCCTATACCTTCCAGAATTATGTTTTCGTTACAAGAGTGATGCAAGAGAGAGAGTCCTCTGGTAGTATCAAGCCCCTGAGGTTGATGGAAAGGAGTGTTTTCAGTGACAGGATGGTATTCGTACGAGCTGTCCATGAAGCTAAGTGGATGAATGAGATGGAGATCAGCATATATGACTCCTGGTTTGACCCTGTTGTATCAAGCTTGCCTGGGCTTATTCCTGATGCTTTCATATATCTTAGAGCAAGTCCTGATACTTGTCACAAAAGAATGTTGCAACGCCACAGAGCAGAAGAAGGTGGAGTGAGCCTAGAGTATCTCCGGGACTTGCATGAAAAGCATGAAAGTTGGCTTTTCCCCTCCGAAAGCGGCAATCATGGGGTATTTTCTGTCAGTCAGGTTCCTTTACATATGGATACCTCTTTACCTCCTGATATTAGAGACCGTGTGATCTATTTGGAGGGTGATCATATGCATTCAAGTATTCAAAAGGTTCCTGCTTTGGTTCTTGACTGTGAGCCGAACATTGATTTCAAGAAAGATATTGAAGCAAAGATGCAGTATGCACGTCAAGTATCAGAGTTTTTTGAATTTGTGAAGAAAAAGCAAGACATTCCATCTGCGAAAGGTAGTGAAGAAGCTAAGAAGACTAGCCAGCCACAAATATTGCTGCCTCAAAATGAATTATGGTCTCCTGATAAGCCTTTCCCTGAGTCAGCCCTCAAATCTTTGGACTTCCGACGAGCCATATCCATGATGTCTGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004137 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006213 GO:0006220 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009116 GO:0009117 GO:0009123 GO:0009124 GO:0009157 GO:0009162 GO:0009163 GO:0009165 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019136 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0034404 GO:0034641 GO:0034654 GO:0042802 GO:0042803 GO:0043094 GO:0043097 GO:0043101 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046134 GO:0046483 GO:0046983 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

dNK

Protein Analysis

590

Amino Acids

65.33

Weight (kDa)

8.45

Isoelectric Point (pI)

55.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
dNK	PF01712	275 - 529	9e-49	Deoxynucleoside kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012467)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72040
fragaria_vesca	FvH4_5g32350 FvH4_5g32350
malus_domestica	MD05G1093300.v1.1 MD10G1100400.v1.1
prunus_persica	Prupe.1G551200_v2.0.a1
pyrus_communis	pycom05g09240 pycom10g08620
rosa_chinensis	RchiOBHm_Chr7g0228851
rosa_laevigata	RLG00000001541
rosa_multiflora	Rmu_sc0004517.1_g000003 Rmu_sc0011218.1_g000004 Rmu_sc0013945.1_g000008
rosa_rugosa	Rorug07G0252300
rosa_samantha	Rh7AG405600 Rh7BG384900 Rh7CG423200 Rh7DG399600
rosa_wichuraiana	Rw7G033600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	309
AccB1I	GGYRCC	1 cut(s)	309
AccBSI	CCGCTC	1 cut(s)	268
AccII	CGCG	2 cut(s)	159, 368
AccIII	TCCGGA	1 cut(s)	544
AclWI	GGATC	1 cut(s)	115
AcoI	YGGCCR	3 cut(s)	278, 360, 534
AcsI	RAATTY	1 cut(s)	1592
AcuI	CTGAAG	2 cut(s)	132, 211
AcyI	GRCGYC	1 cut(s)	294
AfaI	GTAC	5 cut(s)	311, 478, 493, 683, 1125
AfiI	CCNNNNNNNGG	5 cut(s)	194, 270, 271, 306, 569
AgsI	TTSAA	9 cut(s)	118, 769, 920, 973, 1482, 1490, 1537, 1550, 1592
AhlI	ACTAGT	1 cut(s)	479
AjiI	CACGTC	1 cut(s)	1571
AjnI	CCWGG	2 cut(s)	1181, 1210
Alw21I	GWGCWC	2 cut(s)	627, 788
Alw26I	GTCTC	2 cut(s)	1437, 1698
AlwI	GGATC	1 cut(s)	115
AlwNI	CAGNNNCTG	1 cut(s)	10
Ama87I	CYCGRG	2 cut(s)	108, 787
Aor13HI	TCCGGA	1 cut(s)	544
AoxI	GGCC	8 cut(s)	31, 160, 261, 278, 360, 429, 534, 572
ApeKI	GCWGC	5 cut(s)	231, 246, 283, 800, 1672
ApoI	RAATTY	1 cut(s)	1592
ArsI	GACNNNNNNTTYG	2 cut(s)	1169, 1201
Asp700I	GAANNNNTTC	2 cut(s)	439, 977
Asp718I	GGTACC	1 cut(s)	309
AspS9I	GGNCC	5 cut(s)	32, 262, 345, 572, 950
AsuC2I	CCSGG	3 cut(s)	272, 564, 1325
AsuHPI	GGTGA	1 cut(s)	1478
AvaI	CYCGRG	2 cut(s)	108, 787
AvaII	GGWCC	2 cut(s)	345, 950
AxyI	CCTNAGG	1 cut(s)	1079
BanI	GGYRCC	1 cut(s)	309
BanII	GRGCYC	2 cut(s)	627, 788
BbsI	GAAGAC	1 cut(s)	1655
Bbv12I	GWGCWC	2 cut(s)	627, 788
BbvI	GCAGC	5 cut(s)	218, 233, 270, 812, 1659
BccI	CCATC	6 cut(s)	34, 667, 1081, 1108, 1153, 1627
BciT130I	CCWGG	2 cut(s)	1183, 1212
BciVI	GTATCC	1 cut(s)	1411
BclI	TGATCA	1 cut(s)	1468
BcnI	CCSGG	3 cut(s)	272, 564, 1325
BcoDI	GTCTC	2 cut(s)	1437, 1698
BcuI	ACTAGT	1 cut(s)	479
BfaI	CTAG	5 cut(s)	480, 495, 1313, 1653, 1768
BfuI	GTATCC	1 cut(s)	1411
BglI	GCCNNNNNGGC	2 cut(s)	30, 371
BglII	AGATCT	1 cut(s)	901
BlpI	GCTNAGC	2 cut(s)	621, 987
BmcAI	AGTACT	3 cut(s)	478, 493, 683
Bme1390I	CCNGG	5 cut(s)	272, 564, 1183, 1212, 1325
Bme18I	GGWCC	2 cut(s)	345, 950
BmeT110I	CYCGRG	2 cut(s)	108, 787
BmgBI	CACGTC	1 cut(s)	1571
BmgT120I	GGNCC	5 cut(s)	32, 262, 345, 572, 950
BmiI	GGNNCC	8 cut(s)	34, 264, 311, 346, 390, 573, 1404, 1497
BmrFI	CCNGG	5 cut(s)	272, 564, 1183, 1212, 1325
BmsI	GCATC	3 cut(s)	1032, 1216, 1548
BpiI	GAAGAC	1 cut(s)	1655
Bpu1102I	GCTNAGC	2 cut(s)	621, 987
BpuEI	CTTGAG	4 cut(s)	604, 611, 851, 911
BpuMI	CCSGG	3 cut(s)	272, 564, 1325
BsaBI	GATNNNNATC	1 cut(s)	1163
BsaHI	GRCGYC	1 cut(s)	294
BsaI	GGTCTC	2 cut(s)	1437, 1698
BsaJI	CCNNGG	6 cut(s)	157, 366, 378, 444, 575, 1211
BsaWI	WCCGGW	1 cut(s)	544
BsaXI	ACNNNNNCTCC	2 cut(s)	191, 221
Bsc4I	CCNNNNNNNGG	5 cut(s)	194, 270, 271, 306, 569
Bse118I	RCCGGY	2 cut(s)	312, 515
Bse21I	CCTNAGG	1 cut(s)	1079
Bse8I	GATNNNNATC	1 cut(s)	1163
BseAI	TCCGGA	1 cut(s)	544
BseBI	CCWGG	2 cut(s)	1183, 1212
BseDI	CCNNGG	6 cut(s)	157, 366, 378, 444, 575, 1211
BseGI	GGATG	5 cut(s)	678, 705, 778, 1119, 1155
BseJI	GATNNNNATC	1 cut(s)	1163
BseLI	CCNNNNNNNGG	5 cut(s)	194, 270, 271, 306, 569
BseMII	CTCAG	8 cut(s)	351, 446, 540, 612, 714, 978, 1070, 1704
BseRI	GAGGAG	8 cut(s)	54, 88, 199, 202, 205, 241, 461, 776
BseX3I	CGGCCG	1 cut(s)	360
BseXI	GCAGC	5 cut(s)	218, 233, 270, 812, 1659
BsgI	GTGCAG	1 cut(s)	217
Bsh1236I	CGCG	2 cut(s)	159, 368
Bsh1285I	CGRYCG	1 cut(s)	363
BshFI	GGCC	8 cut(s)	33, 162, 263, 280, 362, 431, 536, 574
BshNI	GGYRCC	1 cut(s)	309
BsiEI	CGRYCG	1 cut(s)	363
BsiHKAI	GWGCWC	2 cut(s)	627, 788
BsiHKCI	CYCGRG	2 cut(s)	108, 787
BsiWI	CGTACG	1 cut(s)	1123
BslFI	GGGAC	2 cut(s)	188, 1340
BslI	CCNNNNNNNGG	5 cut(s)	194, 270, 271, 306, 569
BsmAI	GTCTC	2 cut(s)	1437, 1698
BsmFI	GGGAC	2 cut(s)	188, 1340
BsmI	GAATGC	2 cut(s)	979, 1477
BsnI	GGCC	8 cut(s)	33, 162, 263, 280, 362, 431, 536, 574
Bso31I	GGTCTC	2 cut(s)	1437, 1698
BsoBI	CYCGRG	2 cut(s)	108, 787
Bsp1286I	GDGCHC	2 cut(s)	627, 788
Bsp13I	TCCGGA	1 cut(s)	544
Bsp143I	GATC	5 cut(s)	120, 901, 1164, 1452, 1468
Bsp1720I	GCTNAGC	2 cut(s)	621, 987
BspANI	GGCC	8 cut(s)	33, 162, 263, 280, 362, 431, 536, 574
BspCNI	CTCAG	8 cut(s)	350, 447, 539, 613, 715, 979, 1071, 1705
BspEI	TCCGGA	1 cut(s)	544
BspFNI	CGCG	2 cut(s)	159, 368
BspLI	GGNNCC	8 cut(s)	34, 264, 311, 346, 390, 573, 1404, 1497
BspPI	GGATC	1 cut(s)	115
BspT107I	GGYRCC	1 cut(s)	309
BspTNI	GGTCTC	2 cut(s)	1437, 1698
BsrBI	CCGCTC	1 cut(s)	268
BsrFI	RCCGGY	2 cut(s)	312, 515
BssAI	RCCGGY	2 cut(s)	312, 515
BssECI	CCNNGG	6 cut(s)	157, 366, 378, 444, 575, 1211
BssMI	GATC	5 cut(s)	120, 901, 1164, 1452, 1468
BssNI	GRCGYC	1 cut(s)	294
BssT1I	CCWWGG	2 cut(s)	378, 575
Bst2UI	CCWGG	2 cut(s)	1183, 1212
Bst4CI	ACNGT	3 cut(s)	175, 1448, 1517
Bst6I	CTCTTC	1 cut(s)	392
BstACI	GRCGYC	1 cut(s)	294
BstAPI	GCANNNNNTGC	2 cut(s)	10, 240
BstC8I	GCNNGC	5 cut(s)	223, 318, 517, 1208, 1658
BstDSI	CCRYGG	2 cut(s)	157, 366
BstF5I	GGATG	5 cut(s)	678, 705, 778, 1119, 1155
BstFNI	CGCG	2 cut(s)	159, 368
BstKTI	GATC	5 cut(s)	123, 904, 1167, 1455, 1471
BstMAI	GTCTC	2 cut(s)	1437, 1698
BstMBI	GATC	5 cut(s)	120, 901, 1164, 1452, 1468
BstMCI	CGRYCG	1 cut(s)	363
BstMWI	GCNNNNNNNGC	8 cut(s)	10, 30, 231, 240, 322, 371, 983, 1339
BstNI	CCWGG	2 cut(s)	1183, 1212
BstSCI	CCNGG	5 cut(s)	270, 562, 1181, 1210, 1323
BstUI	CGCG	2 cut(s)	159, 368
BstV1I	GCAGC	5 cut(s)	218, 233, 270, 812, 1659
BstV2I	GAAGAC	1 cut(s)	1655
BstX2I	RGATCY	2 cut(s)	120, 901
BstXI	CCANNNNNNTGG	1 cut(s)	385
BstYI	RGATCY	2 cut(s)	120, 901
BstZI	CGGCCG	1 cut(s)	360
Bsu36I	CCTNAGG	1 cut(s)	1079
BsuI	GTATCC	1 cut(s)	1411
BsuRI	GGCC	8 cut(s)	33, 162, 263, 280, 362, 431, 536, 574
BtgI	CCRYGG	2 cut(s)	157, 366
BtrI	CACGTC	1 cut(s)	1571
BtsCI	GGATG	5 cut(s)	678, 705, 778, 1119, 1155
BtsIMutI	CAGTG	2 cut(s)	534, 1111
Cac8I	GCNNGC	5 cut(s)	223, 318, 517, 1208, 1658
CaiI	CAGNNNCTG	1 cut(s)	10
Cfr10I	RCCGGY	2 cut(s)	312, 515
Cfr13I	GGNCC	5 cut(s)	32, 262, 345, 572, 950
Cfr42I	CCGCGG	2 cut(s)	160, 369
CseI	GACGC	1 cut(s)	302
Csp6I	GTAC	5 cut(s)	310, 477, 492, 682, 1124
CspCI	CAANNNNNGTGG	2 cut(s)	1650, 1685
CviAII	CATG	6 cut(s)	719, 1136, 1334, 1343, 1379, 1756
CviQI	GTAC	5 cut(s)	310, 477, 492, 682, 1124
DpnI	GATC	5 cut(s)	122, 903, 1166, 1454, 1470
DpnII	GATC	5 cut(s)	120, 901, 1164, 1452, 1468
EaeI	YGGCCR	3 cut(s)	278, 360, 534
EagI	CGGCCG	1 cut(s)	360
Eam1104I	CTCTTC	1 cut(s)	392
EarI	CTCTTC	1 cut(s)	392
EciI	GGCGGA	2 cut(s)	208, 502
Ecl136II	GAGCTC	2 cut(s)	625, 786
EclXI	CGGCCG	1 cut(s)	360
Eco130I	CCWWGG	2 cut(s)	378, 575
Eco24I	GRGCYC	2 cut(s)	627, 788
Eco31I	GGTCTC	2 cut(s)	1437, 1698
Eco47I	GGWCC	2 cut(s)	345, 950
Eco52I	CGGCCG	1 cut(s)	360
Eco53kI	GAGCTC	2 cut(s)	625, 786
Eco57I	CTGAAG	2 cut(s)	132, 211
Eco81I	CCTNAGG	1 cut(s)	1079
Eco88I	CYCGRG	2 cut(s)	108, 787
EcoICRI	GAGCTC	2 cut(s)	625, 786
EcoO109I	RGGNCCY	3 cut(s)	32, 262, 345
EcoRII	CCWGG	2 cut(s)	1181, 1210
EcoT14I	CCWWGG	2 cut(s)	378, 575
EcoT22I	ATGCAT	1 cut(s)	1479
EcoT38I	GRGCYC	2 cut(s)	627, 788
ErhI	CCWWGG	2 cut(s)	378, 575
FaeI	CATG	6 cut(s)	722, 1139, 1337, 1346, 1382, 1759
FalI	AAGNNNNNCTT	2 cut(s)	845, 877
FaqI	GGGAC	2 cut(s)	188, 1340
FatI	CATG	6 cut(s)	718, 1135, 1333, 1342, 1378, 1755
FauI	CCCGC	2 cut(s)	230, 273
FauNDI	CATATG	2 cut(s)	1413, 1473
FbaI	TGATCA	1 cut(s)	1468
FokI	GGATG	5 cut(s)	685, 692, 785, 1126, 1162
FriOI	GRGCYC	2 cut(s)	627, 788
FspBI	CTAG	5 cut(s)	480, 495, 1313, 1653, 1768
HaeIII	GGCC	8 cut(s)	33, 162, 263, 280, 362, 431, 536, 574
HgaI	GACGC	1 cut(s)	302
Hin1I	GRCGYC	1 cut(s)	294
Hin1II	CATG	6 cut(s)	722, 1139, 1337, 1346, 1382, 1759
HincII	GTYRAC	1 cut(s)	858
HindII	GTYRAC	1 cut(s)	858
HindIII	AAGCTT	1 cut(s)	1204
HinfI	GANTC	4 cut(s)	702, 1055, 1178, 1715
HphI	GGTGA	1 cut(s)	1478
Hpy166II	GTNNAC	2 cut(s)	178, 858
Hpy188I	TCNGA	5 cut(s)	340, 445, 1366, 1582, 1742
Hpy8I	GTNNAC	2 cut(s)	178, 858
Hpy99I	CGWCG	1 cut(s)	1746
HpyAV	CCTTC	8 cut(s)	81, 163, 416, 595, 763, 790, 1021, 1292
HpyCH4III	ACNGT	3 cut(s)	175, 1448, 1517
HpyCH4IV	ACGT	3 cut(s)	51, 201, 1570
HpyF10VI	GCNNNNNNNGC	8 cut(s)	10, 30, 231, 240, 322, 371, 983, 1339
HpySE526I	ACGT	3 cut(s)	51, 201, 1570
Hsp92I	GRCGYC	1 cut(s)	294
Hsp92II	CATG	6 cut(s)	722, 1139, 1337, 1346, 1382, 1759
Kpn2I	TCCGGA	1 cut(s)	544
KpnI	GGTACC	1 cut(s)	313
KroI	GCCGGC	1 cut(s)	515
KroNI	GCCGGC	1 cut(s)	517
Ksp22I	TGATCA	1 cut(s)	1468
KspI	CCGCGG	2 cut(s)	160, 369
Kzo9I	GATC	5 cut(s)	120, 901, 1164, 1452, 1468
LmnI	GCTCC	3 cut(s)	254, 273, 388
Lsp1109I	GCAGC	5 cut(s)	218, 233, 270, 812, 1659
LweI	GCATC	3 cut(s)	1032, 1216, 1548
MaeI	CTAG	5 cut(s)	480, 495, 1313, 1653, 1768
MaeII	ACGT	3 cut(s)	51, 201, 1570
MaeIII	GTNAC	3 cut(s)	1030, 1106, 1262
MalI	GATC	5 cut(s)	122, 903, 1166, 1454, 1470
MbiI	CCGCTC	1 cut(s)	268
MboI	GATC	5 cut(s)	120, 901, 1164, 1452, 1468
MflI	RGATCY	2 cut(s)	120, 901
MhlI	GDGCHC	2 cut(s)	627, 788
MluCI	AATT	3 cut(s)	1018, 1592, 1685
MlyI	GAGTC	3 cut(s)	1064, 1172, 1724
MmeI	TCCRAC	2 cut(s)	279, 1765
Mph1103I	ATGCAT	1 cut(s)	1479
MreI	CGCCGGCG	1 cut(s)	515
MroI	TCCGGA	1 cut(s)	544
MroNI	GCCGGC	1 cut(s)	515
MroXI	GAANNNNTTC	2 cut(s)	439, 977
MseI	TTAA	3 cut(s)	54, 744, 963
MslI	CAYNNNNRTG	2 cut(s)	999, 1754
MspA1I	CMGCKG	5 cut(s)	159, 231, 246, 283, 368
MspR9I	CCNGG	5 cut(s)	272, 564, 1183, 1212, 1325
Mva1269I	GAATGC	2 cut(s)	979, 1477
MvaI	CCWGG	2 cut(s)	1183, 1212
MvnI	CGCG	2 cut(s)	159, 368
MwoI	GCNNNNNNNGC	8 cut(s)	10, 30, 231, 240, 322, 371, 983, 1339
NaeI	GCCGGC	1 cut(s)	517
NciI	CCSGG	3 cut(s)	272, 564, 1325
NdeI	CATATG	2 cut(s)	1413, 1473
NdeII	GATC	5 cut(s)	120, 901, 1164, 1452, 1468
NgoMIV	GCCGGC	1 cut(s)	515
NlaIII	CATG	6 cut(s)	722, 1139, 1337, 1346, 1382, 1759
NlaIV	GGNNCC	8 cut(s)	34, 264, 311, 346, 390, 573, 1404, 1497
NmuCI	GTSAC	2 cut(s)	1106, 1262
NsiI	ATGCAT	1 cut(s)	1479
PaeR7I	CTCGAG	1 cut(s)	108
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PctI	GAATGC	2 cut(s)	979, 1477
PdiI	GCCGGC	1 cut(s)	517
PdmI	GAANNNNTTC	2 cut(s)	439, 977
PfeI	GAWTC	1 cut(s)	702
Pfl23II	CGTACG	1 cut(s)	1123
PfoI	TCCNGGA	1 cut(s)	1323
PleI	GAGTC	3 cut(s)	1063, 1172, 1723
PpsI	GAGTC	3 cut(s)	1063, 1172, 1723
PpuMI	RGGWCCY	1 cut(s)	345
Psp124BI	GAGCTC	2 cut(s)	627, 788
Psp5II	RGGWCCY	1 cut(s)	345
Psp6I	CCWGG	2 cut(s)	1181, 1210
PspGI	CCWGG	2 cut(s)	1181, 1210
PspLI	CGTACG	1 cut(s)	1123
PspN4I	GGNNCC	8 cut(s)	34, 264, 311, 346, 390, 573, 1404, 1497
PspPI	GGNCC	5 cut(s)	32, 262, 345, 572, 950
PspPPI	RGGWCCY	1 cut(s)	345
PspXI	VCTCGAGB	1 cut(s)	108
PstNI	CAGNNNCTG	1 cut(s)	10
PsuI	RGATCY	2 cut(s)	120, 901
PvuII	CAGCTG	1 cut(s)	231
RsaI	GTAC	5 cut(s)	311, 478, 493, 683, 1125
RsaNI	GTAC	5 cut(s)	310, 477, 492, 682, 1124
RseI	CAYNNNNRTG	2 cut(s)	999, 1754
SacI	GAGCTC	2 cut(s)	627, 788
SacII	CCGCGG	2 cut(s)	160, 369
SaqAI	TTAA	3 cut(s)	54, 744, 963
Sau3AI	GATC	5 cut(s)	120, 901, 1164, 1452, 1468
Sau96I	GGNCC	5 cut(s)	32, 262, 345, 572, 950
ScaI	AGTACT	3 cut(s)	478, 493, 683
SchI	GAGTC	3 cut(s)	1064, 1172, 1724
ScrFI	CCNGG	5 cut(s)	272, 564, 1183, 1212, 1325
SduI	GDGCHC	2 cut(s)	627, 788
SfaNI	GCATC	3 cut(s)	1032, 1216, 1548
Sfr274I	CTCGAG	1 cut(s)	108
Sfr303I	CCGCGG	2 cut(s)	160, 369
SgrAI	CRCCGGYG	1 cut(s)	515
SgrBI	CCGCGG	2 cut(s)	160, 369
SinI	GGWCC	2 cut(s)	345, 950
SlaI	CTCGAG	1 cut(s)	108
SmiMI	CAYNNNNRTG	2 cut(s)	999, 1754
SmlI	CTYRAG	5 cut(s)	108, 583, 626, 866, 890
SmoI	CTYRAG	5 cut(s)	108, 583, 626, 866, 890
SpeI	ACTAGT	1 cut(s)	479
Sse9I	AATT	3 cut(s)	1018, 1592, 1685
SspI	AATATT	1 cut(s)	1668
SspMI	CTAG	5 cut(s)	480, 495, 1313, 1653, 1768
SstI	GAGCTC	2 cut(s)	627, 788
StyD4I	CCNGG	5 cut(s)	270, 562, 1181, 1210, 1323
StyI	CCWWGG	2 cut(s)	378, 575
TaaI	ACNGT	3 cut(s)	175, 1448, 1517
TaiI	ACGT	3 cut(s)	54, 204, 1573
TaqI	TCGA	2 cut(s)	109, 782
TasI	AATT	3 cut(s)	1018, 1592, 1685
TatI	WGTACW	3 cut(s)	476, 491, 681
TfiI	GAWTC	1 cut(s)	702
Tru1I	TTAA	3 cut(s)	54, 744, 963
Tru9I	TTAA	3 cut(s)	54, 744, 963
TscAI	CASTG	2 cut(s)	534, 1111
TseFI	GTSAC	2 cut(s)	1106, 1262
TseI	GCWGC	5 cut(s)	231, 246, 283, 800, 1672
Tsp45I	GTSAC	2 cut(s)	1106, 1262
TspDTI	ATGAA	6 cut(s)	1152, 1166, 1222, 1350, 1359, 1698
TspGWI	ACGGA	1 cut(s)	343
TspRI	CASTG	2 cut(s)	534, 1111
VpaK11BI	GGWCC	2 cut(s)	345, 950
XapI	RAATTY	1 cut(s)	1592
XhoI	CTCGAG	1 cut(s)	108
XmnI	GAANNNNTTC	2 cut(s)	439, 977
XspI	CTAG	5 cut(s)	480, 495, 1313, 1653, 1768
ZrmI	AGTACT	3 cut(s)	478, 493, 683
Zsp2I	ATGCAT	1 cut(s)	1479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.