Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012467

Physical Location & Seq

Genomic Coordinates Forward (+)

52151659 .. 52155493

Gene Structure 3835 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20499

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGCAGAAGCTGCTTCGCATAAGCCCATCAGGCCCCATTCTATGCACTCACGTTAACAAGCCTCCTCCTCGTCCTTCTTCTTCTACTCTCTCCTCTCTCGCTCGAGCTTTCAAGAACCCAACTTCCCAAATGCACACAGCTTCAGCCTTCCGCGGCCTCGCCGCCACCGTTTACAACAAACCCACTTCCGGCAACGTCCCCTCCTCCTCCTCCTCCCGCTTCAGCTGCACCCTCTGCCGTTGCTCCTTCAACAAGGCCCCGCTCCGGGCTTGGCCTCTGCTCAAAGACGCCGCCTTTTCTGGGTACCGGCCGGCGTGGCTTCACTCCGGCTCAGATGGGTCCTTTTCCGTTTCGGCCGCCGCGGAGGCTTCCAAGGGTTTGGAACCAGAGAAGAGTGTAGATAAGGGTTTGGAGGATGCAGAGGCCGGAAAGAGTTCCGAGGAGAAGGTGAGTAAGTTTAGTAGCAGTAGTAGTAGTAGTACTAGGAGGCAGAGGACTTCAGGTGGCGGCGGCTCAGTGGTGGCCGGAAATCCGGACTTATTGGCTATTCCGGGTGTGGGGCCAAGGAACTTGAGGAAGCTGGTGGAGAAGGGTATTGGTGGAGTTGCTGAGCTCAAGCAGTTGTATAGAGATAAGTTCTTTGGAAAATCTAATGAGAGGATGGTTGAGTACTTACAAAGTTCTGTAGGAATCATCCACAAAAACCATGCTGAGAGTATAACGAGTTATATTAAAGATAGTGTTGATGAGGAGTTGAAGGATGATAGTTCGAGCTCAGGAGGGAAGTCAGCCCAGAAGAAACGACTTACTTTCTGTGTTGAGGGAAATATCAGCGTGGGAAAGTCAACCTTTCTCAAGGAAATAGCAAACACTACGCTTGAGCTACAAGATCTTGTTGAGGTGGTTCAAGAACCTATTGACAAGTGGCAGGATATTGGACCTGACCATTTTAACATATTGAATGCTTTCTATGCTGAGCCACATCGGTATGCCTATACCTTCCAGAATTATGTTTTCGTTACAAGAGTGATGCAAGAGAGAGAGTCCTCTGGTAGTATCAAGCCCCTGAGGTTGATGGAAAGGAGTGTTTTCAGTGACAGGATGGTTTTCGTACGAGCTGTCCATGAAGCGAAGTGGATGAATGAGATGGAGATCAGCATATATGACTCCTGGTTTGACCCTGTTGTATCAAGCTTGCCTGGGCTTATTCCTGATGCTTTCATATATCTTAGAGCAAGTCCTGACACTTGTCACAAAAGAATGATGCAACGCCACAGAGCAGAAGAAGGTGGAGTGAGCCTAGAGTATCTCCGGGACTTGCATGAAAAGCATGAAAGTTGGCTTTTCCCCTCCGAAAGCGGCAATCATGGGGTATTTTCTGTCAGTCAGGTTCCTTTACATATGGATACCTCCTTACCTCCTGATATTAGAGACCGTGTGTTCTATTTGGAGGGTAAGCATATGCATTCAAGTATTCAAAAGGTTCCTGCTTTGGTTCTTGACTGTGAGCCAAACATTGATTTCAAGAAAGATATTGAAGCAAAGATGCAGTATGCACGTCAAGTATCAGAGTTTTTTGAATTTGTGAAGAAAAAGCAAGACATTCCATCTGCAAAAGGTAGTGAAGAAGCTAAGAAGACTTGCCAGCCACAAATATTGCTGCCTCAAAATGAATTATGGTCTCCTGATAAGCCTTTCCCTCAGTCAGCCCTCAAATCTTTGGACTTCCGACGAGCCATATCCATGATGTCTGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004137 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006213 GO:0006220 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009116 GO:0009117 GO:0009123 GO:0009124 GO:0009157 GO:0009162 GO:0009163 GO:0009165 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019136 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0034404 GO:0034641 GO:0034654 GO:0042802 GO:0042803 GO:0043094 GO:0043097 GO:0043101 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046134 GO:0046483 GO:0046983 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

dNK

Protein Analysis

585

Amino Acids

65.15

Weight (kDa)

8.76

Isoelectric Point (pI)

55.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
dNK	PF01712	271 - 525	4.7e-49	Deoxynucleoside kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012467)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72040
fragaria_vesca	FvH4_5g32350 FvH4_5g32350
malus_domestica	MD05G1093300.v1.1 MD10G1100400.v1.1
prunus_persica	Prupe.1G551200_v2.0.a1
pyrus_communis	pycom05g09240 pycom10g08620
rosa_chinensis	RchiOBHm_Chr7g0228851
rosa_laevigata	RLG00000001541
rosa_multiflora	Rmu_sc0004517.1_g000003 Rmu_sc0011218.1_g000004 Rmu_sc0013945.1_g000008
rosa_rugosa	Rorug07G0252300
rosa_samantha	Rh7AG405600 Rh7BG384900 Rh7CG423200 Rh7DG399600
rosa_wichuraiana	Rw7G033600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	303
AccB1I	GGYRCC	1 cut(s)	303
AccBSI	CCGCTC	1 cut(s)	262
AccII	CGCG	2 cut(s)	153, 362
AccIII	TCCGGA	1 cut(s)	532
AcoI	YGGCCR	3 cut(s)	308, 354, 522
AcsI	RAATTY	1 cut(s)	1580
AcuI	CTGAAG	3 cut(s)	126, 205, 483
AcyI	GRCGYC	1 cut(s)	288
AfaI	GTAC	4 cut(s)	305, 481, 671, 1113
AfiI	CCNNNNNNNGG	5 cut(s)	188, 264, 265, 300, 557
AjiI	CACGTC	1 cut(s)	1559
AjnI	CCWGG	2 cut(s)	1169, 1198
AloI	GAACNNNNNNTCC	2 cut(s)	107, 139
Alw21I	GWGCWC	2 cut(s)	615, 776
Alw26I	GTCTC	2 cut(s)	1425, 1686
AlwNI	CAGNNNCTG	1 cut(s)	10
Ama87I	CYCGRG	1 cut(s)	102
Aor13HI	TCCGGA	1 cut(s)	532
AoxI	GGCC	9 cut(s)	31, 154, 255, 272, 308, 354, 423, 522, 560
ApeKI	GCWGC	3 cut(s)	10, 225, 1660
ApoI	RAATTY	1 cut(s)	1580
ArsI	GACNNNNNNTTYG	2 cut(s)	1157, 1189
Asp700I	GAANNNNTTC	2 cut(s)	433, 965
Asp718I	GGTACC	1 cut(s)	303
AspS9I	GGNCC	5 cut(s)	32, 256, 339, 560, 938
AsuC2I	CCSGG	3 cut(s)	266, 552, 1313
AsuHPI	GGTGA	1 cut(s)	460
AvaI	CYCGRG	1 cut(s)	102
AvaII	GGWCC	2 cut(s)	339, 938
AxyI	CCTNAGG	1 cut(s)	1067
BanI	GGYRCC	1 cut(s)	303
BanII	GRGCYC	2 cut(s)	615, 776
BbsI	GAAGAC	1 cut(s)	1643
Bbv12I	GWGCWC	2 cut(s)	615, 776
BbvI	GCAGC	2 cut(s)	212, 1647
BccI	CCATC	7 cut(s)	34, 329, 655, 1069, 1096, 1141, 1615
BceAI	ACGGC	1 cut(s)	222
BciT130I	CCWGG	2 cut(s)	1171, 1200
BciVI	GTATCC	1 cut(s)	1399
BcnI	CCSGG	3 cut(s)	266, 552, 1313
BcoDI	GTCTC	2 cut(s)	1425, 1686
BfaI	CTAG	3 cut(s)	483, 1301, 1756
BfmI	CTRYAG	1 cut(s)	684
BfuI	GTATCC	1 cut(s)	1399
BglI	GCCNNNNNGGC	3 cut(s)	30, 316, 365
BglII	AGATCT	1 cut(s)	889
BlpI	GCTNAGC	2 cut(s)	609, 975
BmcAI	AGTACT	2 cut(s)	481, 671
Bme1390I	CCNGG	5 cut(s)	266, 552, 1171, 1200, 1313
Bme18I	GGWCC	2 cut(s)	339, 938
BmeT110I	CYCGRG	1 cut(s)	102
BmgBI	CACGTC	1 cut(s)	1559
BmgT120I	GGNCC	5 cut(s)	32, 256, 339, 560, 938
BmiI	GGNNCC	8 cut(s)	34, 258, 305, 340, 384, 561, 1392, 1485
BmrFI	CCNGG	5 cut(s)	266, 552, 1171, 1200, 1313
BmsI	GCATC	5 cut(s)	406, 1020, 1204, 1254, 1536
BoxI	GACNNNNGTC	1 cut(s)	1248
BpiI	GAAGAC	1 cut(s)	1643
Bpu10I	CCTNAGC	1 cut(s)	775
Bpu1102I	GCTNAGC	2 cut(s)	609, 975
BpuEI	CTTGAG	4 cut(s)	592, 599, 839, 899
BpuMI	CCSGG	3 cut(s)	266, 552, 1313
BsaBI	GATNNNNATC	1 cut(s)	1151
BsaHI	GRCGYC	1 cut(s)	288
BsaI	GGTCTC	2 cut(s)	1425, 1686
BsaJI	CCNNGG	6 cut(s)	151, 360, 372, 438, 563, 1199
BsaWI	WCCGGW	1 cut(s)	532
BsaXI	ACNNNNNCTCC	2 cut(s)	185, 215
Bsc4I	CCNNNNNNNGG	5 cut(s)	188, 264, 265, 300, 557
Bse118I	RCCGGY	2 cut(s)	306, 310
Bse21I	CCTNAGG	1 cut(s)	1067
Bse8I	GATNNNNATC	1 cut(s)	1151
BseAI	TCCGGA	1 cut(s)	532
BseBI	CCWGG	2 cut(s)	1171, 1200
BseDI	CCNNGG	6 cut(s)	151, 360, 372, 438, 563, 1199
BseGI	GGATG	6 cut(s)	421, 666, 693, 766, 1107, 1143
BseJI	GATNNNNATC	1 cut(s)	1151
BseLI	CCNNNNNNNGG	5 cut(s)	188, 264, 265, 300, 557
BseMII	CTCAG	8 cut(s)	345, 528, 600, 702, 789, 966, 1058, 1715
BseRI	GAGGAG	9 cut(s)	54, 57, 82, 193, 196, 199, 202, 455, 764
BseX3I	CGGCCG	2 cut(s)	308, 354
BseXI	GCAGC	2 cut(s)	212, 1647
BsgI	GTGCAG	1 cut(s)	211
Bsh1236I	CGCG	2 cut(s)	153, 362
Bsh1285I	CGRYCG	2 cut(s)	311, 357
BshFI	GGCC	9 cut(s)	33, 156, 257, 274, 310, 356, 425, 524, 562
BshNI	GGYRCC	1 cut(s)	303
BsiEI	CGRYCG	2 cut(s)	311, 357
BsiHKAI	GWGCWC	2 cut(s)	615, 776
BsiHKCI	CYCGRG	1 cut(s)	102
BsiWI	CGTACG	1 cut(s)	1111
BslFI	GGGAC	2 cut(s)	182, 1328
BslI	CCNNNNNNNGG	5 cut(s)	188, 264, 265, 300, 557
BsmAI	GTCTC	2 cut(s)	1425, 1686
BsmFI	GGGAC	2 cut(s)	182, 1328
BsmI	GAATGC	2 cut(s)	967, 1465
BsnI	GGCC	9 cut(s)	33, 156, 257, 274, 310, 356, 425, 524, 562
Bso31I	GGTCTC	2 cut(s)	1425, 1686
BsoBI	CYCGRG	1 cut(s)	102
Bsp1286I	GDGCHC	2 cut(s)	615, 776
Bsp13I	TCCGGA	1 cut(s)	532
Bsp143I	GATC	2 cut(s)	889, 1152
Bsp1720I	GCTNAGC	2 cut(s)	609, 975
BspANI	GGCC	9 cut(s)	33, 156, 257, 274, 310, 356, 425, 524, 562
BspCNI	CTCAG	8 cut(s)	344, 527, 601, 703, 788, 967, 1059, 1714
BspEI	TCCGGA	1 cut(s)	532
BspFNI	CGCG	2 cut(s)	153, 362
BspLI	GGNNCC	8 cut(s)	34, 258, 305, 340, 384, 561, 1392, 1485
BspT107I	GGYRCC	1 cut(s)	303
BspTNI	GGTCTC	2 cut(s)	1425, 1686
BsrBI	CCGCTC	1 cut(s)	262
BsrFI	RCCGGY	2 cut(s)	306, 310
BssAI	RCCGGY	2 cut(s)	306, 310
BssECI	CCNNGG	6 cut(s)	151, 360, 372, 438, 563, 1199
BssMI	GATC	2 cut(s)	889, 1152
BssNI	GRCGYC	1 cut(s)	288
BssT1I	CCWWGG	2 cut(s)	372, 563
Bst2UI	CCWGG	2 cut(s)	1171, 1200
Bst4CI	ACNGT	3 cut(s)	169, 1436, 1505
Bst6I	CTCTTC	1 cut(s)	386
BstACI	GRCGYC	1 cut(s)	288
BstAPI	GCANNNNNTGC	2 cut(s)	10, 234
BstC8I	GCNNGC	3 cut(s)	312, 1196, 1646
BstDSI	CCRYGG	2 cut(s)	151, 360
BstF5I	GGATG	6 cut(s)	421, 666, 693, 766, 1107, 1143
BstFNI	CGCG	2 cut(s)	153, 362
BstKTI	GATC	2 cut(s)	892, 1155
BstMAI	GTCTC	2 cut(s)	1425, 1686
BstMBI	GATC	2 cut(s)	889, 1152
BstMCI	CGRYCG	2 cut(s)	311, 357
BstMWI	GCNNNNNNNGC	8 cut(s)	10, 30, 225, 234, 316, 365, 971, 1327
BstNI	CCWGG	2 cut(s)	1171, 1200
BstPAI	GACNNNNGTC	1 cut(s)	1248
BstSCI	CCNGG	5 cut(s)	264, 550, 1169, 1198, 1311
BstSFI	CTRYAG	1 cut(s)	684
BstUI	CGCG	2 cut(s)	153, 362
BstV1I	GCAGC	2 cut(s)	212, 1647
BstV2I	GAAGAC	1 cut(s)	1643
BstX2I	RGATCY	1 cut(s)	889
BstXI	CCANNNNNNTGG	1 cut(s)	379
BstYI	RGATCY	1 cut(s)	889
BstZI	CGGCCG	2 cut(s)	308, 354
Bsu36I	CCTNAGG	1 cut(s)	1067
BsuI	GTATCC	1 cut(s)	1399
BsuRI	GGCC	9 cut(s)	33, 156, 257, 274, 310, 356, 425, 524, 562
BtgI	CCRYGG	2 cut(s)	151, 360
BtrI	CACGTC	1 cut(s)	1559
BtsCI	GGATG	6 cut(s)	421, 666, 693, 766, 1107, 1143
BtsIMutI	CAGTG	2 cut(s)	522, 1099
Cac8I	GCNNGC	3 cut(s)	312, 1196, 1646
CaiI	CAGNNNCTG	1 cut(s)	10
Cfr10I	RCCGGY	2 cut(s)	306, 310
Cfr13I	GGNCC	5 cut(s)	32, 256, 339, 560, 938
Cfr42I	CCGCGG	2 cut(s)	154, 363
CseI	GACGC	1 cut(s)	296
Csp6I	GTAC	4 cut(s)	304, 480, 670, 1112
CspCI	CAANNNNNGTGG	2 cut(s)	1638, 1673
CviAII	CATG	6 cut(s)	707, 1124, 1322, 1331, 1367, 1744
CviQI	GTAC	4 cut(s)	304, 480, 670, 1112
DpnI	GATC	2 cut(s)	891, 1154
DpnII	GATC	2 cut(s)	889, 1152
EaeI	YGGCCR	3 cut(s)	308, 354, 522
EagI	CGGCCG	2 cut(s)	308, 354
Eam1104I	CTCTTC	1 cut(s)	386
EarI	CTCTTC	1 cut(s)	386
Ecl136II	GAGCTC	2 cut(s)	613, 774
EclXI	CGGCCG	2 cut(s)	308, 354
Eco130I	CCWWGG	2 cut(s)	372, 563
Eco24I	GRGCYC	2 cut(s)	615, 776
Eco31I	GGTCTC	2 cut(s)	1425, 1686
Eco47I	GGWCC	2 cut(s)	339, 938
Eco52I	CGGCCG	2 cut(s)	308, 354
Eco53kI	GAGCTC	2 cut(s)	613, 774
Eco57I	CTGAAG	3 cut(s)	126, 205, 483
Eco81I	CCTNAGG	1 cut(s)	1067
Eco88I	CYCGRG	1 cut(s)	102
EcoICRI	GAGCTC	2 cut(s)	613, 774
EcoO109I	RGGNCCY	3 cut(s)	32, 256, 339
EcoRII	CCWGG	2 cut(s)	1169, 1198
EcoT14I	CCWWGG	2 cut(s)	372, 563
EcoT22I	ATGCAT	1 cut(s)	1467
EcoT38I	GRGCYC	2 cut(s)	615, 776
ErhI	CCWWGG	2 cut(s)	372, 563
FaeI	CATG	6 cut(s)	710, 1127, 1325, 1334, 1370, 1747
FalI	AAGNNNNNCTT	2 cut(s)	833, 865
FaqI	GGGAC	2 cut(s)	182, 1328
FatI	CATG	6 cut(s)	706, 1123, 1321, 1330, 1366, 1743
FauI	CCCGC	2 cut(s)	224, 267
FauNDI	CATATG	2 cut(s)	1401, 1461
FokI	GGATG	6 cut(s)	428, 673, 680, 773, 1114, 1150
FriOI	GRGCYC	2 cut(s)	615, 776
FspBI	CTAG	3 cut(s)	483, 1301, 1756
HaeIII	GGCC	9 cut(s)	33, 156, 257, 274, 310, 356, 425, 524, 562
HgaI	GACGC	1 cut(s)	296
Hin1I	GRCGYC	1 cut(s)	288
Hin1II	CATG	6 cut(s)	710, 1127, 1325, 1334, 1370, 1747
HincII	GTYRAC	2 cut(s)	55, 846
HindII	GTYRAC	2 cut(s)	55, 846
HindIII	AAGCTT	1 cut(s)	1192
HinfI	GANTC	3 cut(s)	690, 1043, 1166
HpaI	GTTAAC	1 cut(s)	55
HphI	GGTGA	1 cut(s)	460
Hpy166II	GTNNAC	3 cut(s)	55, 172, 846
Hpy188I	TCNGA	5 cut(s)	334, 439, 1354, 1570, 1730
Hpy8I	GTNNAC	3 cut(s)	55, 172, 846
Hpy99I	CGWCG	1 cut(s)	1734
HpyAV	CCTTC	8 cut(s)	84, 157, 256, 439, 583, 751, 1009, 1280
HpyCH4III	ACNGT	3 cut(s)	169, 1436, 1505
HpyCH4IV	ACGT	3 cut(s)	51, 195, 1558
HpyF10VI	GCNNNNNNNGC	8 cut(s)	10, 30, 225, 234, 316, 365, 971, 1327
HpySE526I	ACGT	3 cut(s)	51, 195, 1558
Hsp92I	GRCGYC	1 cut(s)	288
Hsp92II	CATG	6 cut(s)	710, 1127, 1325, 1334, 1370, 1747
Kpn2I	TCCGGA	1 cut(s)	532
KpnI	GGTACC	1 cut(s)	307
KroI	GCCGGC	1 cut(s)	310
KroNI	GCCGGC	1 cut(s)	312
KspAI	GTTAAC	1 cut(s)	55
KspI	CCGCGG	2 cut(s)	154, 363
Kzo9I	GATC	2 cut(s)	889, 1152
LmnI	GCTCC	2 cut(s)	248, 267
Lsp1109I	GCAGC	2 cut(s)	212, 1647
LweI	GCATC	5 cut(s)	406, 1020, 1204, 1254, 1536
MaeI	CTAG	3 cut(s)	483, 1301, 1756
MaeII	ACGT	3 cut(s)	51, 195, 1558
MaeIII	GTNAC	3 cut(s)	1018, 1094, 1250
MalI	GATC	2 cut(s)	891, 1154
MbiI	CCGCTC	1 cut(s)	262
MboI	GATC	2 cut(s)	889, 1152
MboII	GAAGA	8 cut(s)	69, 72, 403, 808, 1295, 1600, 1637, 1648
MflI	RGATCY	1 cut(s)	889
MhlI	GDGCHC	2 cut(s)	615, 776
MluCI	AATT	3 cut(s)	1006, 1580, 1673
MlyI	GAGTC	2 cut(s)	1052, 1160
MmeI	TCCRAC	1 cut(s)	1753
Mph1103I	ATGCAT	1 cut(s)	1467
MroI	TCCGGA	1 cut(s)	532
MroNI	GCCGGC	1 cut(s)	310
MroXI	GAANNNNTTC	2 cut(s)	433, 965
MseI	TTAA	3 cut(s)	54, 732, 951
MslI	CAYNNNNRTG	2 cut(s)	987, 1742
MspA1I	CMGCKG	3 cut(s)	153, 225, 362
MspR9I	CCNGG	5 cut(s)	266, 552, 1171, 1200, 1313
Mva1269I	GAATGC	2 cut(s)	967, 1465
MvaI	CCWGG	2 cut(s)	1171, 1200
MvnI	CGCG	2 cut(s)	153, 362
MwoI	GCNNNNNNNGC	8 cut(s)	10, 30, 225, 234, 316, 365, 971, 1327
NaeI	GCCGGC	1 cut(s)	312
NciI	CCSGG	3 cut(s)	266, 552, 1313
NdeI	CATATG	2 cut(s)	1401, 1461
NdeII	GATC	2 cut(s)	889, 1152
NgoMIV	GCCGGC	1 cut(s)	310
NlaIII	CATG	6 cut(s)	710, 1127, 1325, 1334, 1370, 1747
NlaIV	GGNNCC	8 cut(s)	34, 258, 305, 340, 384, 561, 1392, 1485
NmuCI	GTSAC	2 cut(s)	1094, 1250
NsiI	ATGCAT	1 cut(s)	1467
PaeR7I	CTCGAG	1 cut(s)	102
PcsI	WCGNNNNNNNCGW	1 cut(s)	165
PctI	GAATGC	2 cut(s)	967, 1465
PdiI	GCCGGC	1 cut(s)	312
PdmI	GAANNNNTTC	2 cut(s)	433, 965
PfeI	GAWTC	1 cut(s)	690
Pfl23II	CGTACG	1 cut(s)	1111
PfoI	TCCNGGA	1 cut(s)	1311
PleI	GAGTC	2 cut(s)	1051, 1160
PpsI	GAGTC	2 cut(s)	1051, 1160
PpuMI	RGGWCCY	1 cut(s)	339
PshAI	GACNNNNGTC	1 cut(s)	1248
Psp124BI	GAGCTC	2 cut(s)	615, 776
Psp5II	RGGWCCY	1 cut(s)	339
Psp6I	CCWGG	2 cut(s)	1169, 1198
PspGI	CCWGG	2 cut(s)	1169, 1198
PspLI	CGTACG	1 cut(s)	1111
PspN4I	GGNNCC	8 cut(s)	34, 258, 305, 340, 384, 561, 1392, 1485
PspPI	GGNCC	5 cut(s)	32, 256, 339, 560, 938
PspPPI	RGGWCCY	1 cut(s)	339
PspXI	VCTCGAGB	1 cut(s)	102
PstNI	CAGNNNCTG	1 cut(s)	10
PsuI	RGATCY	1 cut(s)	889
PvuII	CAGCTG	1 cut(s)	225
RsaI	GTAC	4 cut(s)	305, 481, 671, 1113
RsaNI	GTAC	4 cut(s)	304, 480, 670, 1112
RseI	CAYNNNNRTG	2 cut(s)	987, 1742
SacI	GAGCTC	2 cut(s)	615, 776
SacII	CCGCGG	2 cut(s)	154, 363
SaqAI	TTAA	3 cut(s)	54, 732, 951
Sau3AI	GATC	2 cut(s)	889, 1152
Sau96I	GGNCC	5 cut(s)	32, 256, 339, 560, 938
ScaI	AGTACT	2 cut(s)	481, 671
SchI	GAGTC	2 cut(s)	1052, 1160
ScrFI	CCNGG	5 cut(s)	266, 552, 1171, 1200, 1313
SduI	GDGCHC	2 cut(s)	615, 776
SfaNI	GCATC	5 cut(s)	406, 1020, 1204, 1254, 1536
SfcI	CTRYAG	1 cut(s)	684
Sfr274I	CTCGAG	1 cut(s)	102
Sfr303I	CCGCGG	2 cut(s)	154, 363
SgrBI	CCGCGG	2 cut(s)	154, 363
SinI	GGWCC	2 cut(s)	339, 938
SlaI	CTCGAG	1 cut(s)	102
SmiMI	CAYNNNNRTG	2 cut(s)	987, 1742
SmlI	CTYRAG	5 cut(s)	102, 571, 614, 854, 878
SmoI	CTYRAG	5 cut(s)	102, 571, 614, 854, 878
Sse9I	AATT	3 cut(s)	1006, 1580, 1673
SspI	AATATT	1 cut(s)	1656
SspMI	CTAG	3 cut(s)	483, 1301, 1756
SstI	GAGCTC	2 cut(s)	615, 776
StyD4I	CCNGG	5 cut(s)	264, 550, 1169, 1198, 1311
StyI	CCWWGG	2 cut(s)	372, 563
TaaI	ACNGT	3 cut(s)	169, 1436, 1505
TaiI	ACGT	3 cut(s)	54, 198, 1561
TaqI	TCGA	2 cut(s)	103, 770
TasI	AATT	3 cut(s)	1006, 1580, 1673
TatI	WGTACW	2 cut(s)	479, 669
TauI	GCSGC	8 cut(s)	156, 164, 293, 359, 362, 510, 513, 1362
TfiI	GAWTC	1 cut(s)	690
Tru1I	TTAA	3 cut(s)	54, 732, 951
Tru9I	TTAA	3 cut(s)	54, 732, 951
TscAI	CASTG	2 cut(s)	522, 1099
TseFI	GTSAC	2 cut(s)	1094, 1250
TseI	GCWGC	3 cut(s)	10, 225, 1660
Tsp45I	GTSAC	2 cut(s)	1094, 1250
TspDTI	ATGAA	6 cut(s)	1140, 1154, 1210, 1338, 1347, 1686
TspGWI	ACGGA	1 cut(s)	337
TspRI	CASTG	2 cut(s)	522, 1099
VpaK11BI	GGWCC	2 cut(s)	339, 938
XapI	RAATTY	1 cut(s)	1580
XhoI	CTCGAG	1 cut(s)	102
XmnI	GAANNNNTTC	2 cut(s)	433, 965
XspI	CTAG	3 cut(s)	483, 1301, 1756
ZrmI	AGTACT	2 cut(s)	481, 671
Zsp2I	ATGCAT	1 cut(s)	1467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.