MD05G1294100.v1.1

Pollen-specific leucine-rich repeat extensin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0015799
Physical Location & Seq
Forward (+)
42675839 .. 42677576
1738 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1294100.v1.1.491

Sequence Viewer

Length: 1695 bp
ATGCAGGCCTATGGCTGCTTTCTAGTTAGCTTTTTTATTCTCGCTTTATTTTCCTTCTCCTCTTCTGCCCTAACCGATGCCGAAGCGTCCTTTCTTGCACATCGCCAACTCGTAAGCCTCCCAGAAGGTGGTGACATTCCTGACAACTATGAATTTGAGGTTGAGCTTGATCTGAAGTTTCCCAACACCAGGCTTCGACGCGCATACATTGGGCTTCAGGCTCTGAAAAAGGCCGTGTACTCGGACCCTCTCAAAACAACCGAGAACTGGGTTGGCGAGAATGTATGTGCTTACAACGGGGTCTTCTGCGCGCCGGCTCTTGATGATCCGGAACTTGAGGTGGTGGCAGGCATTGATATCAACCATGCAGACATCGCTGGACACCTTCCTGCGGAATTAGGGTTGTTGACGGACATGGCATTGTTCCATATCAACTCTAATAGGTTTTGTGGAATCATCCCCAAGAGCTTTAGAAGGCTAACTCTTCTCCACGAGTTCGATGTTAGCAATAACCGCTTTGTGGGATCGTTTCCCGACGTTGTCCTAGAAATTCCTAACCTCAAGTACCTCGACCTTAGGTTCAACGATTTCGAGGGGAAGCTACCTCCTGAGCTTTTCAACAAGGAACTTGATGCTTTGTTCTTGAATGATAACAGGTTCACATCCACCATTCCTGAAAATCTCGGCAACTCCCCCGTATCAGTTCTTGTCGTCGCCAACAACCAACTCGAGGGCTGCATCCCTAACAGCATTGGAAAAATGGTTAAAACTTTAAATGAGGTTGTATTCTCCAACAACAAGTTTACTGGATGTCTGCCTCCTGAAATCGGACAACTCGCAAACATGACGGTGTTCGATATTAGTTCAAACACATTCAGTGGGATTATGTCGAAAACTTTCAAGGGCTTGGAAAAGGTGGAGGAGCTGGATATCGCACATAACATGCTAACTGGGTTTGTTCCTAATAGTATATGTACGTTGCCAAACTTGGGAAACTTCACGTTCTCGTACAACTACTTCAATGGAGAGACCCAAAAATGCGTGCCAGGATCTCGGAAGGATGTTGTGTTTGATGATGTGAGCAATTGTTTACCAGACAGGCCTGAACAAAAGTCGGCAAAAGAATGTCATGTTGTGGTGAGCAAGCCAGTGGATTGCAGTAAGGCAAAGTGTGGCGGTGGACATGGGCTGTTGAAACCTTCTCAGCCTCTGGTTGAAAAGCCAAAGACACCAGAGCCAGAACAACCCAAACAACCACCACCACAACCTAAGCCACAACCACCAAAACCATCACCTGAACTAGTTCAAACACCTCATACACCAAAACCACCCAAGGAGGAGCAACCCATGGAACAACCTCCCAAGGAAGAGCAACCCAAGGAACAACCTGCCAAAGAGGAGCCACCCCAGGTACAACCTCCTAGAGATGAGCCACCGAAGGTGAAACCTCCTAAAGAGGAGCTACCAAAGGTGCAACCTCCTAAAGAGGAGTTACCCAAAGAACAACCTCCAAAAGAGGAACTACCACAACCGCCTCAAGTAGAAGCATATGCTCCAGAGCCGATTTTAGAAACCTCATCACCTACACCATCACCATCACCTAAAGACATAGGTCCCAAGAACCCTTTGGGCAAAGATCTGTCGTTCCAATCCGCCCTCACCCACCATCAGTTCACTCCCATCCACCAGCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

565

Amino Acids

62.49

Weight (kDa)

5.21

Isoelectric Point (pI)

51.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 281 - 338 2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015799)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06800
malus_domestica MD05G1294100.v1.1 MD10G1272100.v1.1 MD10G1272200.v1.1
prunus_persica Prupe.4G069900_v2.0.a1
pyrus_communis pycom10g22760
rosa_chinensis RchiOBHm_Chr5g0012341
rosa_laevigata RLG00000031905
rosa_multiflora Rmu_ssc0000217.1_g000010
rosa_rugosa Rorug05G0000600
rosa_samantha Rh5AG094700 Rh5BG090900 Rh5CG104000 Rh5DG090400
rosa_wichuraiana Rw5G008270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1396
AccB7I CCANNNNNTGG 1 cut(s) 128
AccII CGCG 2 cut(s) 201, 311
AccIII TCCGGA 1 cut(s) 328
AciI CCGC 5 cut(s) 392, 514, 1176, 1532, 1653
AclWI GGATC 3 cut(s) 320, 532, 1057
AcsI RAATTY 2 cut(s) 152, 549
AcuI CTGAAG 2 cut(s) 194, 200
AfaI GTAC 5 cut(s) 239, 566, 976, 1010, 1413
AfiI CCNNNNNNNGG 8 cut(s) 128, 189, 267, 391, 520, 730, 827, 989
AgsI TTSAA 9 cut(s) 583, 619, 646, 867, 901, 1021, 1195, 1217, 1307
AhlI ACTAGT 1 cut(s) 1300
AjnI CCWGG 3 cut(s) 188, 1045, 1407
AluBI AGCT 8 cut(s) 30, 166, 468, 601, 613, 925, 1462, 1690
AluI AGCT 8 cut(s) 30, 166, 468, 601, 613, 925, 1462, 1690
Alw26I GTCTC 1 cut(s) 1022
AlwI GGATC 3 cut(s) 320, 532, 1057
AlwNI CAGNNNCTG 2 cut(s) 223, 1210
Ama87I CYCGRG 1 cut(s) 728
Aor13HI TCCGGA 1 cut(s) 328
AoxI GGCC 3 cut(s) 6, 231, 1100
ApeKI GCWGC 2 cut(s) 15, 735
ApoI RAATTY 2 cut(s) 152, 549
Asp700I GAANNNNTTC 2 cut(s) 896, 1302
AspLEI GCGC 3 cut(s) 203, 311, 313
AspS9I GGNCC 2 cut(s) 244, 1613
AsuHPI GGTGA 8 cut(s) 143, 1150, 1284, 1453, 1572, 1584, 1590, 1651
AvaI CYCGRG 1 cut(s) 728
AvaII GGWCC 2 cut(s) 244, 1613
AxyI CCTNAGG 1 cut(s) 575
BarI GAAGNNNNNNTAC 2 cut(s) 1001, 1033
BauI CACGAG 1 cut(s) 491
BbsI GAAGAC 1 cut(s) 295
BbvI GCAGC 2 cut(s) 2, 722
BccI CCATC 5 cut(s) 1297, 1597, 1603, 1674, 1688
BceAI ACGGC 1 cut(s) 218
BciT130I CCWGG 3 cut(s) 190, 1047, 1409
BcoDI GTCTC 1 cut(s) 1022
BcuI ACTAGT 1 cut(s) 1300
BfaI CTAG 4 cut(s) 23, 545, 1301, 1422
BfmI CTRYAG 1 cut(s) 1691
BfuAI ACCTGC 1 cut(s) 1396
BglII AGATCT 1 cut(s) 1636
BisI GCNGC 2 cut(s) 16, 736
BlsI GCNGC 2 cut(s) 17, 737
Bme1390I CCNGG 3 cut(s) 190, 1047, 1409
Bme18I GGWCC 2 cut(s) 244, 1613
BmeT110I CYCGRG 1 cut(s) 728
BmgT120I GGNCC 2 cut(s) 244, 1613
BmiI GGNNCC 3 cut(s) 246, 1401, 1615
BmrFI CCNGG 3 cut(s) 190, 1047, 1409
BmrI ACTGGG 2 cut(s) 277, 960
BmsI GCATC 3 cut(s) 67, 622, 747
BmuI ACTGGG 2 cut(s) 277, 960
BoxI GACNNNNGTC 1 cut(s) 1611
BpiI GAAGAC 1 cut(s) 295
BpmI CTGGAG 1 cut(s) 1539
Bpu10I CCTNAGC 2 cut(s) 609, 1269
BpuEI CTTGAG 3 cut(s) 356, 545, 1521
BsaI GGTCTC 1 cut(s) 1022
BsaJI CCNNGG 5 cut(s) 1332, 1347, 1362, 1377, 1407
BsaWI WCCGGW 1 cut(s) 328
Bsc4I CCNNNNNNNGG 8 cut(s) 128, 189, 267, 391, 520, 730, 827, 989
Bse118I RCCGGY 1 cut(s) 313
Bse1I ACTGG 4 cut(s) 272, 811, 955, 1148
Bse21I CCTNAGG 1 cut(s) 575
BseAI TCCGGA 1 cut(s) 328
BseBI CCWGG 3 cut(s) 190, 1047, 1409
BseDI CCNNGG 5 cut(s) 1332, 1347, 1362, 1377, 1407
BseGI GGATG 6 cut(s) 456, 662, 738, 815, 1066, 1680
BseLI CCNNNNNNNGG 8 cut(s) 128, 189, 267, 391, 520, 730, 827, 989
BseMII CTCAG 2 cut(s) 600, 1217
BseNI ACTGG 4 cut(s) 272, 811, 955, 1148
BsePI GCGCGC 1 cut(s) 309
BseRI GAGGAG 6 cut(s) 49, 935, 1352, 1412, 1472, 1502
BseXI GCAGC 2 cut(s) 2, 722
Bsh1236I CGCG 2 cut(s) 201, 311
BshFI GGCC 3 cut(s) 8, 233, 1102
BsiHKCI CYCGRG 1 cut(s) 728
BsiSI CCGG 2 cut(s) 314, 329
BslFI GGGAC 1 cut(s) 1599
BslI CCNNNNNNNGG 8 cut(s) 128, 189, 267, 391, 520, 730, 827, 989
BsmAI GTCTC 1 cut(s) 1022
BsmFI GGGAC 1 cut(s) 1599
BsnI GGCC 3 cut(s) 8, 233, 1102
Bso31I GGTCTC 1 cut(s) 1022
BsoBI CYCGRG 1 cut(s) 728
Bsp13I TCCGGA 1 cut(s) 328
Bsp143I GATC 5 cut(s) 169, 325, 524, 1049, 1636
Bsp19I CCATGG 1 cut(s) 1347
BspACI CCGC 5 cut(s) 392, 514, 1176, 1532, 1653
BspANI GGCC 3 cut(s) 8, 233, 1102
BspCNI CTCAG 2 cut(s) 601, 1216
BspEI TCCGGA 1 cut(s) 328
BspFNI CGCG 2 cut(s) 201, 311
BspLI GGNNCC 3 cut(s) 246, 1401, 1615
BspMI ACCTGC 1 cut(s) 1396
BspPI GGATC 3 cut(s) 320, 532, 1057
BspQI GCTCTTC 1 cut(s) 1362
BspTNI GGTCTC 1 cut(s) 1022
BsrFI RCCGGY 1 cut(s) 313
BsrI ACTGG 4 cut(s) 272, 811, 955, 1148
BssAI RCCGGY 1 cut(s) 313
BssECI CCNNGG 5 cut(s) 1332, 1347, 1362, 1377, 1407
BssHII GCGCGC 1 cut(s) 309
BssMI GATC 5 cut(s) 169, 325, 524, 1049, 1636
BssSI CACGAG 1 cut(s) 491
BssT1I CCWWGG 4 cut(s) 1332, 1347, 1362, 1377
Bst2BI CACGAG 1 cut(s) 491
Bst2UI CCWGG 3 cut(s) 190, 1047, 1409
Bst4CI ACNGT 1 cut(s) 850
Bst6I CTCTTC 3 cut(s) 67, 489, 1362
BstC8I GCNNGC 6 cut(s) 6, 311, 315, 349, 1043, 1145
BstDEI CTNAG 4 cut(s) 575, 609, 1203, 1269
BstDSI CCRYGG 1 cut(s) 1347
BstF5I GGATG 6 cut(s) 456, 662, 738, 815, 1066, 1680
BstFNI CGCG 2 cut(s) 201, 311
BstHHI GCGC 3 cut(s) 203, 311, 313
BstKTI GATC 5 cut(s) 172, 328, 527, 1052, 1639
BstMAI GTCTC 1 cut(s) 1022
BstMBI GATC 5 cut(s) 169, 325, 524, 1049, 1636
BstMWI GCNNNNNNNGC 2 cut(s) 374, 513
BstNI CCWGG 3 cut(s) 190, 1047, 1409
BstNSI RCATGY 1 cut(s) 946
BstPAI GACNNNNGTC 1 cut(s) 1611
BstSCI CCNGG 3 cut(s) 188, 1045, 1407
BstSFI CTRYAG 1 cut(s) 1691
BstUI CGCG 2 cut(s) 201, 311
BstV1I GCAGC 2 cut(s) 2, 722
BstV2I GAAGAC 1 cut(s) 295
BstX2I RGATCY 2 cut(s) 1049, 1636
BstYI RGATCY 2 cut(s) 1049, 1636
Bsu36I CCTNAGG 1 cut(s) 575
BsuRI GGCC 3 cut(s) 8, 233, 1102
BtgI CCRYGG 1 cut(s) 1347
BtgZI GCGATG 2 cut(s) 86, 358
BtsCI GGATG 6 cut(s) 456, 662, 738, 815, 1066, 1680
BtsIMutI CAGTG 2 cut(s) 883, 1155
BveI ACCTGC 1 cut(s) 1396
Cac8I GCNNGC 6 cut(s) 6, 311, 315, 349, 1043, 1145
CaiI CAGNNNCTG 2 cut(s) 223, 1210
CfoI GCGC 3 cut(s) 203, 311, 313
Cfr10I RCCGGY 1 cut(s) 313
Cfr13I GGNCC 2 cut(s) 244, 1613
CseI GACGC 2 cut(s) 75, 207
Csp6I GTAC 5 cut(s) 238, 565, 975, 1009, 1412
CviAII CATG 7 cut(s) 365, 415, 844, 943, 1130, 1184, 1348
CviQI GTAC 5 cut(s) 238, 565, 975, 1009, 1412
DdeI CTNAG 4 cut(s) 575, 609, 1203, 1269
DpnI GATC 5 cut(s) 171, 327, 526, 1051, 1638
DpnII GATC 5 cut(s) 169, 325, 524, 1049, 1636
DraI TTTAAA 1 cut(s) 774
Eam1104I CTCTTC 3 cut(s) 67, 489, 1362
EarI CTCTTC 3 cut(s) 67, 489, 1362
EciI GGCGGA 1 cut(s) 1642
Eco130I CCWWGG 4 cut(s) 1332, 1347, 1362, 1377
Eco147I AGGCCT 2 cut(s) 8, 1102
Eco31I GGTCTC 1 cut(s) 1022
Eco32I GATATC 2 cut(s) 358, 931
Eco47I GGWCC 2 cut(s) 244, 1613
Eco57I CTGAAG 2 cut(s) 194, 200
Eco81I CCTNAGG 1 cut(s) 575
Eco88I CYCGRG 1 cut(s) 728
EcoO109I RGGNCCY 1 cut(s) 1613
EcoRII CCWGG 3 cut(s) 188, 1045, 1407
EcoRV GATATC 2 cut(s) 358, 931
EcoT14I CCWWGG 4 cut(s) 1332, 1347, 1362, 1377
ErhI CCWWGG 4 cut(s) 1332, 1347, 1362, 1377
FaeI CATG 7 cut(s) 368, 418, 847, 946, 1133, 1187, 1351
FaqI GGGAC 1 cut(s) 1599
FatI CATG 7 cut(s) 364, 414, 843, 942, 1129, 1183, 1347
FauNDI CATATG 1 cut(s) 1549
Fnu4HI GCNGC 2 cut(s) 16, 736
FokI GGATG 6 cut(s) 443, 649, 725, 822, 1073, 1667
Fsp4HI GCNGC 2 cut(s) 16, 736
FspBI CTAG 4 cut(s) 23, 545, 1301, 1422
GlaI GCGC 3 cut(s) 202, 310, 312
GluI GCNGC 2 cut(s) 16, 736
GsuI CTGGAG 1 cut(s) 1539
HaeIII GGCC 3 cut(s) 8, 233, 1102
HapII CCGG 2 cut(s) 314, 329
HgaI GACGC 2 cut(s) 75, 207
HhaI GCGC 3 cut(s) 203, 311, 313
Hin1II CATG 7 cut(s) 368, 418, 847, 946, 1133, 1187, 1351
Hin6I GCGC 3 cut(s) 201, 309, 311
HinP1I GCGC 3 cut(s) 201, 309, 311
HincII GTYRAC 1 cut(s) 408
HindII GTYRAC 1 cut(s) 408
HinfI GANTC 1 cut(s) 453
HpaII CCGG 2 cut(s) 314, 329
HphI GGTGA 8 cut(s) 143, 1150, 1284, 1453, 1572, 1584, 1590, 1651
Hpy166II GTNNAC 7 cut(s) 238, 408, 660, 804, 1091, 1181, 1674
Hpy188I TCNGA 5 cut(s) 174, 225, 244, 830, 1056
Hpy188III TCNNGA 9 cut(s) 140, 320, 329, 533, 608, 643, 674, 821, 1556
Hpy8I GTNNAC 7 cut(s) 238, 408, 660, 804, 1091, 1181, 1674
Hpy99I CGWCG 3 cut(s) 201, 539, 716
HpyAV CCTTC 7 cut(s) 64, 119, 395, 468, 1051, 1209, 1432
HpyCH4III ACNGT 1 cut(s) 850
HpyCH4IV ACGT 3 cut(s) 537, 977, 1001
HpyCH4V TGCA 6 cut(s) 4, 98, 368, 738, 1158, 1474
HpyF10VI GCNNNNNNNGC 2 cut(s) 374, 513
HpyF3I CTNAG 4 cut(s) 575, 609, 1203, 1269
HpySE526I ACGT 3 cut(s) 537, 977, 1001
Hsp92II CATG 7 cut(s) 368, 418, 847, 946, 1133, 1187, 1351
HspAI GCGC 3 cut(s) 201, 309, 311
Kpn2I TCCGGA 1 cut(s) 328
KroI GCCGGC 1 cut(s) 313
KroNI GCCGGC 1 cut(s) 315
Kzo9I GATC 5 cut(s) 169, 325, 524, 1049, 1636
LguI GCTCTTC 1 cut(s) 1362
LmnI GCTCC 5 cut(s) 922, 1339, 1399, 1459, 1558
Lsp1109I GCAGC 2 cut(s) 2, 722
LweI GCATC 3 cut(s) 67, 622, 747
MaeI CTAG 4 cut(s) 23, 545, 1301, 1422
MaeII ACGT 3 cut(s) 537, 977, 1001
MaeIII GTNAC 2 cut(s) 131, 1491
MalI GATC 5 cut(s) 171, 327, 526, 1051, 1638
MboI GATC 5 cut(s) 169, 325, 524, 1049, 1636
MboII GAAGA 4 cut(s) 54, 295, 476, 1379
MfeI CAATTG 1 cut(s) 1084
MflI RGATCY 2 cut(s) 1049, 1636
MluCI AATT 4 cut(s) 152, 395, 549, 1084
MmeI TCCRAC 1 cut(s) 816
MroI TCCGGA 1 cut(s) 328
MroNI GCCGGC 1 cut(s) 313
MroXI GAANNNNTTC 2 cut(s) 896, 1302
MseI TTAA 2 cut(s) 765, 773
MslI CAYNNNNRTG 1 cut(s) 848
MspA1I CMGCKG 1 cut(s) 1690
MspI CCGG 2 cut(s) 314, 329
MspR9I CCNGG 3 cut(s) 190, 1047, 1409
MunI CAATTG 1 cut(s) 1084
MvaI CCWGG 3 cut(s) 190, 1047, 1409
MvnI CGCG 2 cut(s) 201, 311
MwoI GCNNNNNNNGC 2 cut(s) 374, 513
NaeI GCCGGC 1 cut(s) 315
NcoI CCATGG 1 cut(s) 1347
NdeI CATATG 1 cut(s) 1549
NdeII GATC 5 cut(s) 169, 325, 524, 1049, 1636
NgoMIV GCCGGC 1 cut(s) 313
NlaIII CATG 7 cut(s) 368, 418, 847, 946, 1133, 1187, 1351
NlaIV GGNNCC 3 cut(s) 246, 1401, 1615
NmeAIII GCCGAG 1 cut(s) 663
NmuCI GTSAC 1 cut(s) 131
NspI RCATGY 1 cut(s) 946
PaeR7I CTCGAG 1 cut(s) 728
PauI GCGCGC 1 cut(s) 309
PceI AGGCCT 2 cut(s) 8, 1102
PciSI GCTCTTC 1 cut(s) 1362
PdiI GCCGGC 1 cut(s) 315
PdmI GAANNNNTTC 2 cut(s) 896, 1302
PfeI GAWTC 1 cut(s) 453
PflFI GACNNNGTC 1 cut(s) 539
PflMI CCANNNNNTGG 1 cut(s) 128
PkrI GCNGC 2 cut(s) 17, 737
PpuMI RGGWCCY 1 cut(s) 1613
PshAI GACNNNNGTC 1 cut(s) 1611
Psp5II RGGWCCY 1 cut(s) 1613
Psp6I CCWGG 3 cut(s) 188, 1045, 1407
PspGI CCWGG 3 cut(s) 188, 1045, 1407
PspN4I GGNNCC 3 cut(s) 246, 1401, 1615
PspPI GGNCC 2 cut(s) 244, 1613
PspPPI RGGWCCY 1 cut(s) 1613
PspXI VCTCGAGB 1 cut(s) 728
PstNI CAGNNNCTG 2 cut(s) 223, 1210
PsuI RGATCY 2 cut(s) 1049, 1636
PsyI GACNNNGTC 1 cut(s) 539
PteI GCGCGC 1 cut(s) 309
PvuII CAGCTG 1 cut(s) 1690
RsaI GTAC 5 cut(s) 239, 566, 976, 1010, 1413
RsaNI GTAC 5 cut(s) 238, 565, 975, 1009, 1412
RseI CAYNNNNRTG 1 cut(s) 848
SapI GCTCTTC 1 cut(s) 1362
SaqAI TTAA 2 cut(s) 765, 773
SatI GCNGC 2 cut(s) 16, 736
Sau3AI GATC 5 cut(s) 169, 325, 524, 1049, 1636
Sau96I GGNCC 2 cut(s) 244, 1613
ScrFI CCNGG 3 cut(s) 190, 1047, 1409
SfaNI GCATC 3 cut(s) 67, 622, 747
SfcI CTRYAG 1 cut(s) 1691
Sfr274I CTCGAG 1 cut(s) 728
SinI GGWCC 2 cut(s) 244, 1613
SlaI CTCGAG 1 cut(s) 728
SmiMI CAYNNNNRTG 1 cut(s) 848
SmlI CTYRAG 4 cut(s) 335, 560, 728, 1536
SmoI CTYRAG 4 cut(s) 335, 560, 728, 1536
SpeI ACTAGT 1 cut(s) 1300
Sse9I AATT 4 cut(s) 152, 395, 549, 1084
SseBI AGGCCT 2 cut(s) 8, 1102
SsiI CCGC 5 cut(s) 392, 514, 1176, 1532, 1653
SspMI CTAG 4 cut(s) 23, 545, 1301, 1422
StuI AGGCCT 2 cut(s) 8, 1102
StyD4I CCNGG 3 cut(s) 188, 1045, 1407
StyI CCWWGG 4 cut(s) 1332, 1347, 1362, 1377
TaaI ACNGT 1 cut(s) 850
TaiI ACGT 3 cut(s) 540, 980, 1004
TaqI TCGA 7 cut(s) 196, 498, 570, 591, 729, 855, 890
TasI AATT 4 cut(s) 152, 395, 549, 1084
TatI WGTACW 1 cut(s) 237
TfiI GAWTC 1 cut(s) 453
Tru1I TTAA 2 cut(s) 765, 773
Tru9I TTAA 2 cut(s) 765, 773
TscAI CASTG 2 cut(s) 883, 1155
TseFI GTSAC 1 cut(s) 131
TseI GCWGC 2 cut(s) 15, 735
Tsp45I GTSAC 1 cut(s) 131
TspDTI ATGAA 1 cut(s) 165
TspGWI ACGGA 1 cut(s) 425
TspRI CASTG 2 cut(s) 883, 1155
Tth111I GACNNNGTC 1 cut(s) 539
Van91I CCANNNNNTGG 1 cut(s) 128
VpaK11BI GGWCC 2 cut(s) 244, 1613
XapI RAATTY 2 cut(s) 152, 549
XceI RCATGY 1 cut(s) 946
XcmI CCANNNNNNNNNTGG 1 cut(s) 1624
XhoI CTCGAG 1 cut(s) 728
XmnI GAANNNNTTC 2 cut(s) 896, 1302
XspI CTAG 4 cut(s) 23, 545, 1301, 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.