Leucine Rich Repeat
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g06800 |
| malus_domestica | MD05G1294100.v1.1 MD10G1272100.v1.1 MD10G1272200.v1.1 |
| prunus_persica | Prupe.4G069900_v2.0.a1 |
| pyrus_communis | pycom10g22760 |
| rosa_chinensis | RchiOBHm_Chr5g0012341 |
| rosa_laevigata | RLG00000031905 |
| rosa_multiflora | Rmu_ssc0000217.1_g000010 |
| rosa_rugosa | Rorug05G0000600 |
| rosa_samantha | Rh5AG094700 Rh5BG090900 Rh5CG104000 Rh5DG090400 |
| rosa_wichuraiana | Rw5G008270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 201 |
| AccIII | TCCGGA | 1 cut(s) | 328 |
| AclWI | GGATC | 3 cut(s) | 320, 532, 1750 |
| AcsI | RAATTY | 2 cut(s) | 152, 549 |
| AcuI | CTGAAG | 1 cut(s) | 200 |
| AfaI | GTAC | 3 cut(s) | 239, 566, 2123 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 267, 268, 391, 520, 700, 827, 989 |
| AgeI | ACCGGT | 1 cut(s) | 2074 |
| AhlI | ACTAGT | 5 cut(s) | 1555, 1798, 1903, 1966, 2284 |
| AjnI | CCWGG | 3 cut(s) | 188, 312, 2590 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1462, 1494, 2166, 2198 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 623, 655 |
| AluBI | AGCT | 6 cut(s) | 30, 166, 468, 613, 1025, 2480 |
| AluI | AGCT | 6 cut(s) | 30, 166, 468, 613, 1025, 2480 |
| Alw26I | GTCTC | 3 cut(s) | 122, 1226, 1588 |
| AlwI | GGATC | 3 cut(s) | 320, 532, 1750 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1117 |
| Aor13HI | TCCGGA | 1 cut(s) | 328 |
| AoxI | GGCC | 3 cut(s) | 6, 231, 1094 |
| ApeKI | GCWGC | 2 cut(s) | 15, 735 |
| ApoI | RAATTY | 2 cut(s) | 152, 549 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1004, 1036 |
| AsiGI | ACCGGT | 1 cut(s) | 2074 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 896, 1188 |
| AspLEI | GCGC | 4 cut(s) | 203, 311, 1930, 2082 |
| AspS9I | GGNCC | 3 cut(s) | 244, 1094, 2056 |
| AsuII | TTCGAA | 1 cut(s) | 1100 |
| AvaII | GGWCC | 2 cut(s) | 244, 2056 |
| AxyI | CCTNAGG | 1 cut(s) | 575 |
| BanII | GRGCYC | 1 cut(s) | 1284 |
| BauI | CACGAG | 1 cut(s) | 491 |
| BbvI | GCAGC | 2 cut(s) | 2, 722 |
| BccI | CCATC | 7 cut(s) | 704, 732, 1228, 1801, 1888, 2494, 2551 |
| BceAI | ACGGC | 1 cut(s) | 218 |
| BciT130I | CCWGG | 3 cut(s) | 190, 314, 2592 |
| BcoDI | GTCTC | 3 cut(s) | 122, 1226, 1588 |
| BcuI | ACTAGT | 5 cut(s) | 1555, 1798, 1903, 1966, 2284 |
| BfaI | CTAG | 7 cut(s) | 23, 1556, 1799, 1904, 1967, 2285, 2459 |
| BfmI | CTRYAG | 1 cut(s) | 1596 |
| BisI | GCNGC | 2 cut(s) | 16, 736 |
| BlsI | GCNGC | 2 cut(s) | 17, 737 |
| Bme1390I | CCNGG | 3 cut(s) | 190, 314, 2592 |
| Bme18I | GGWCC | 2 cut(s) | 244, 2056 |
| BmgT120I | GGNCC | 3 cut(s) | 244, 1094, 2056 |
| BmiI | GGNNCC | 9 cut(s) | 246, 1191, 1263, 1293, 1323, 1413, 1452, 1467, 2558 |
| BmrFI | CCNGG | 3 cut(s) | 190, 314, 2592 |
| BmrI | ACTGGG | 2 cut(s) | 277, 960 |
| BmsI | GCATC | 2 cut(s) | 67, 747 |
| BmuI | ACTGGG | 2 cut(s) | 277, 960 |
| BpmI | CTGGAG | 3 cut(s) | 318, 1437, 2511 |
| Bpu10I | CCTNAGC | 1 cut(s) | 609 |
| Bpu14I | TTCGAA | 1 cut(s) | 1100 |
| BpuEI | CTTGAG | 1 cut(s) | 545 |
| BsaI | GGTCTC | 1 cut(s) | 1226 |
| BsaJI | CCNNGG | 5 cut(s) | 312, 1239, 1419, 1461, 2590 |
| BsaWI | WCCGGW | 3 cut(s) | 328, 806, 2074 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 419, 449 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 267, 268, 391, 520, 700, 827, 989 |
| Bse118I | RCCGGY | 2 cut(s) | 1447, 2074 |
| Bse21I | CCTNAGG | 1 cut(s) | 575 |
| BseAI | TCCGGA | 1 cut(s) | 328 |
| BseBI | CCWGG | 3 cut(s) | 190, 314, 2592 |
| BseDI | CCNNGG | 5 cut(s) | 312, 1239, 1419, 1461, 2590 |
| BseGI | GGATG | 7 cut(s) | 456, 662, 738, 815, 1220, 1742, 2191 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 267, 268, 391, 520, 700, 827, 989 |
| BseMII | CTCAG | 3 cut(s) | 589, 600, 1124 |
| BseRI | GAGGAG | 7 cut(s) | 935, 1274, 1304, 1334, 1364, 1668, 2391 |
| BseXI | GCAGC | 2 cut(s) | 2, 722 |
| Bsh1236I | CGCG | 1 cut(s) | 201 |
| BshFI | GGCC | 3 cut(s) | 8, 233, 1096 |
| BshTI | ACCGGT | 1 cut(s) | 2074 |
| BsiSI | CCGG | 5 cut(s) | 329, 378, 807, 1448, 2075 |
| BslFI | GGGAC | 1 cut(s) | 1509 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 267, 268, 391, 520, 700, 827, 989 |
| BsmAI | GTCTC | 3 cut(s) | 122, 1226, 1588 |
| BsmFI | GGGAC | 1 cut(s) | 1509 |
| BsmI | GAATGC | 1 cut(s) | 2227 |
| BsnI | GGCC | 3 cut(s) | 8, 233, 1096 |
| Bso31I | GGTCTC | 1 cut(s) | 1226 |
| Bsp119I | TTCGAA | 1 cut(s) | 1100 |
| Bsp13I | TCCGGA | 1 cut(s) | 328 |
| Bsp143I | GATC | 4 cut(s) | 325, 355, 524, 1755 |
| BspANI | GGCC | 3 cut(s) | 8, 233, 1096 |
| BspCNI | CTCAG | 3 cut(s) | 588, 601, 1123 |
| BspEI | TCCGGA | 1 cut(s) | 328 |
| BspFNI | CGCG | 1 cut(s) | 201 |
| BspLI | GGNNCC | 9 cut(s) | 246, 1191, 1263, 1293, 1323, 1413, 1452, 1467, 2558 |
| BspPI | GGATC | 3 cut(s) | 320, 532, 1750 |
| BspT104I | TTCGAA | 1 cut(s) | 1100 |
| BspTNI | GGTCTC | 1 cut(s) | 1226 |
| BsrFI | RCCGGY | 2 cut(s) | 1447, 2074 |
| BssAI | RCCGGY | 2 cut(s) | 1447, 2074 |
| BssECI | CCNNGG | 5 cut(s) | 312, 1239, 1419, 1461, 2590 |
| BssMI | GATC | 4 cut(s) | 325, 355, 524, 1755 |
| BssSI | CACGAG | 1 cut(s) | 491 |
| BssT1I | CCWWGG | 2 cut(s) | 1239, 1419 |
| Bst2BI | CACGAG | 1 cut(s) | 491 |
| Bst2UI | CCWGG | 3 cut(s) | 190, 314, 2592 |
| Bst4CI | ACNGT | 1 cut(s) | 850 |
| Bst6I | CTCTTC | 4 cut(s) | 489, 1224, 2112, 2217 |
| BstBI | TTCGAA | 1 cut(s) | 1100 |
| BstC8I | GCNNGC | 5 cut(s) | 6, 349, 1052, 2084, 2118 |
| BstDEI | CTNAG | 6 cut(s) | 121, 462, 575, 609, 988, 1110 |
| BstF5I | GGATG | 7 cut(s) | 456, 662, 738, 815, 1220, 1742, 2191 |
| BstFNI | CGCG | 1 cut(s) | 201 |
| BstHHI | GCGC | 4 cut(s) | 203, 311, 1930, 2082 |
| BstKTI | GATC | 4 cut(s) | 328, 358, 527, 1758 |
| BstMAI | GTCTC | 3 cut(s) | 122, 1226, 1588 |
| BstMBI | GATC | 4 cut(s) | 325, 355, 524, 1755 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 374, 513, 610, 2413 |
| BstNI | CCWGG | 3 cut(s) | 190, 314, 2592 |
| BstNSI | RCATGY | 1 cut(s) | 946 |
| BstSCI | CCNGG | 3 cut(s) | 188, 312, 2590 |
| BstSFI | CTRYAG | 1 cut(s) | 1596 |
| BstUI | CGCG | 1 cut(s) | 201 |
| BstV1I | GCAGC | 2 cut(s) | 2, 722 |
| Bsu36I | CCTNAGG | 1 cut(s) | 575 |
| BsuRI | GGCC | 3 cut(s) | 8, 233, 1096 |
| BtgZI | GCGATG | 2 cut(s) | 86, 358 |
| BtsCI | GGATG | 7 cut(s) | 456, 662, 738, 815, 1220, 1742, 2191 |
| Cac8I | GCNNGC | 5 cut(s) | 6, 349, 1052, 2084, 2118 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1117 |
| CfoI | GCGC | 4 cut(s) | 203, 311, 1930, 2082 |
| Cfr10I | RCCGGY | 2 cut(s) | 1447, 2074 |
| Cfr13I | GGNCC | 3 cut(s) | 244, 1094, 2056 |
| CseI | GACGC | 2 cut(s) | 207, 641 |
| Csp6I | GTAC | 3 cut(s) | 238, 565, 2122 |
| CspAI | ACCGGT | 1 cut(s) | 2074 |
| CviAII | CATG | 5 cut(s) | 415, 844, 901, 943, 1091 |
| CviQI | GTAC | 3 cut(s) | 238, 565, 2122 |
| DdeI | CTNAG | 6 cut(s) | 121, 462, 575, 609, 988, 1110 |
| DpnI | GATC | 4 cut(s) | 327, 357, 526, 1757 |
| DpnII | GATC | 4 cut(s) | 325, 355, 524, 1755 |
| DraI | TTTAAA | 1 cut(s) | 774 |
| Eam1104I | CTCTTC | 4 cut(s) | 489, 1224, 2112, 2217 |
| EarI | CTCTTC | 4 cut(s) | 489, 1224, 2112, 2217 |
| EciI | GGCGGA | 2 cut(s) | 55, 2568 |
| Eco130I | CCWWGG | 2 cut(s) | 1239, 1419 |
| Eco147I | AGGCCT | 1 cut(s) | 8 |
| Eco24I | GRGCYC | 1 cut(s) | 1284 |
| Eco31I | GGTCTC | 1 cut(s) | 1226 |
| Eco32I | GATATC | 1 cut(s) | 931 |
| Eco47I | GGWCC | 2 cut(s) | 244, 2056 |
| Eco57I | CTGAAG | 1 cut(s) | 200 |
| Eco81I | CCTNAGG | 1 cut(s) | 575 |
| EcoRII | CCWGG | 3 cut(s) | 188, 312, 2590 |
| EcoRV | GATATC | 1 cut(s) | 931 |
| EcoT14I | CCWWGG | 2 cut(s) | 1239, 1419 |
| EcoT22I | ATGCAT | 1 cut(s) | 2229 |
| EcoT38I | GRGCYC | 1 cut(s) | 1284 |
| ErhI | CCWWGG | 2 cut(s) | 1239, 1419 |
| FaeI | CATG | 5 cut(s) | 418, 847, 904, 946, 1094 |
| FaqI | GGGAC | 1 cut(s) | 1509 |
| FatI | CATG | 5 cut(s) | 414, 843, 900, 942, 1090 |
| Fnu4HI | GCNGC | 2 cut(s) | 16, 736 |
| FokI | GGATG | 7 cut(s) | 443, 649, 725, 822, 1207, 1729, 2178 |
| FriOI | GRGCYC | 1 cut(s) | 1284 |
| Fsp4HI | GCNGC | 2 cut(s) | 16, 736 |
| FspBI | CTAG | 7 cut(s) | 23, 1556, 1799, 1904, 1967, 2285, 2459 |
| GlaI | GCGC | 4 cut(s) | 202, 310, 1929, 2081 |
| GluI | GCNGC | 2 cut(s) | 16, 736 |
| GsuI | CTGGAG | 3 cut(s) | 318, 1437, 2511 |
| HaeIII | GGCC | 3 cut(s) | 8, 233, 1096 |
| HapII | CCGG | 5 cut(s) | 329, 378, 807, 1448, 2075 |
| HgaI | GACGC | 2 cut(s) | 207, 641 |
| HhaI | GCGC | 4 cut(s) | 203, 311, 1930, 2082 |
| Hin1II | CATG | 5 cut(s) | 418, 847, 904, 946, 1094 |
| Hin6I | GCGC | 4 cut(s) | 201, 309, 1928, 2080 |
| HinP1I | GCGC | 4 cut(s) | 201, 309, 1928, 2080 |
| HincII | GTYRAC | 1 cut(s) | 408 |
| HindII | GTYRAC | 1 cut(s) | 408 |
| HinfI | GANTC | 2 cut(s) | 453, 1457 |
| HpaII | CCGG | 5 cut(s) | 329, 378, 807, 1448, 2075 |
| Hpy188I | TCNGA | 5 cut(s) | 244, 252, 830, 1119, 1462 |
| Hpy99I | CGWCG | 3 cut(s) | 201, 539, 1532 |
| HpyCH4III | ACNGT | 1 cut(s) | 850 |
| HpyCH4IV | ACGT | 2 cut(s) | 537, 1001 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 374, 513, 610, 2413 |
| HpyF3I | CTNAG | 6 cut(s) | 121, 462, 575, 609, 988, 1110 |
| HpySE526I | ACGT | 2 cut(s) | 537, 1001 |
| Hsp92II | CATG | 5 cut(s) | 418, 847, 904, 946, 1094 |
| HspAI | GCGC | 4 cut(s) | 201, 309, 1928, 2080 |
| Kpn2I | TCCGGA | 1 cut(s) | 328 |
| Kzo9I | GATC | 4 cut(s) | 325, 355, 524, 1755 |
| LmnI | GCTCC | 4 cut(s) | 1261, 1291, 1321, 1456 |
| Lsp1109I | GCAGC | 2 cut(s) | 2, 722 |
| LweI | GCATC | 2 cut(s) | 67, 747 |
| MaeI | CTAG | 7 cut(s) | 23, 1556, 1799, 1904, 1967, 2285, 2459 |
| MaeII | ACGT | 2 cut(s) | 537, 1001 |
| MaeIII | GTNAC | 2 cut(s) | 131, 1353 |
| MalI | GATC | 4 cut(s) | 327, 357, 526, 1757 |
| MboI | GATC | 4 cut(s) | 325, 355, 524, 1755 |
| MboII | GAAGA | 5 cut(s) | 476, 1241, 1451, 2099, 2204 |
| MfeI | CAATTG | 1 cut(s) | 1485 |
| MluCI | AATT | 8 cut(s) | 152, 333, 395, 549, 1470, 1485, 1842, 2034 |
| MlyI | GAGTC | 1 cut(s) | 1466 |
| MmeI | TCCRAC | 3 cut(s) | 816, 906, 1217 |
| Mph1103I | ATGCAT | 1 cut(s) | 2229 |
| MroI | TCCGGA | 1 cut(s) | 328 |
| MroXI | GAANNNNTTC | 2 cut(s) | 896, 1188 |
| MseI | TTAA | 1 cut(s) | 773 |
| MspI | CCGG | 5 cut(s) | 329, 378, 807, 1448, 2075 |
| MspR9I | CCNGG | 3 cut(s) | 190, 314, 2592 |
| MunI | CAATTG | 1 cut(s) | 1485 |
| Mva1269I | GAATGC | 1 cut(s) | 2227 |
| MvaI | CCWGG | 3 cut(s) | 190, 314, 2592 |
| MvnI | CGCG | 1 cut(s) | 201 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 374, 513, 610, 2413 |
| NdeII | GATC | 4 cut(s) | 325, 355, 524, 1755 |
| NlaIII | CATG | 5 cut(s) | 418, 847, 904, 946, 1094 |
| NlaIV | GGNNCC | 9 cut(s) | 246, 1191, 1263, 1293, 1323, 1413, 1452, 1467, 2558 |
| NmeAIII | GCCGAG | 1 cut(s) | 663 |
| NmuCI | GTSAC | 1 cut(s) | 131 |
| NsiI | ATGCAT | 1 cut(s) | 2229 |
| NspI | RCATGY | 1 cut(s) | 946 |
| NspV | TTCGAA | 1 cut(s) | 1100 |
| PceI | AGGCCT | 1 cut(s) | 8 |
| PctI | GAATGC | 1 cut(s) | 2227 |
| PdmI | GAANNNNTTC | 2 cut(s) | 896, 1188 |
| PfeI | GAWTC | 1 cut(s) | 453 |
| PflFI | GACNNNGTC | 2 cut(s) | 539, 2534 |
| PinAI | ACCGGT | 1 cut(s) | 2074 |
| PkrI | GCNGC | 2 cut(s) | 17, 737 |
| PleI | GAGTC | 1 cut(s) | 1465 |
| PpsI | GAGTC | 1 cut(s) | 1465 |
| Psp6I | CCWGG | 3 cut(s) | 188, 312, 2590 |
| PspGI | CCWGG | 3 cut(s) | 188, 312, 2590 |
| PspN4I | GGNNCC | 9 cut(s) | 246, 1191, 1263, 1293, 1323, 1413, 1452, 1467, 2558 |
| PspPI | GGNCC | 3 cut(s) | 244, 1094, 2056 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1117 |
| PsyI | GACNNNGTC | 2 cut(s) | 539, 2534 |
| RsaI | GTAC | 3 cut(s) | 239, 566, 2123 |
| RsaNI | GTAC | 3 cut(s) | 238, 565, 2122 |
| SaqAI | TTAA | 1 cut(s) | 773 |
| SatI | GCNGC | 2 cut(s) | 16, 736 |
| Sau3AI | GATC | 4 cut(s) | 325, 355, 524, 1755 |
| Sau96I | GGNCC | 3 cut(s) | 244, 1094, 2056 |
| SchI | GAGTC | 1 cut(s) | 1466 |
| ScrFI | CCNGG | 3 cut(s) | 190, 314, 2592 |
| SfaNI | GCATC | 2 cut(s) | 67, 747 |
| SfcI | CTRYAG | 1 cut(s) | 1596 |
| SfuI | TTCGAA | 1 cut(s) | 1100 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2074 |
| SinI | GGWCC | 2 cut(s) | 244, 2056 |
| SmlI | CTYRAG | 1 cut(s) | 560 |
| SmoI | CTYRAG | 1 cut(s) | 560 |
| SpeI | ACTAGT | 5 cut(s) | 1555, 1798, 1903, 1966, 2284 |
| Sse9I | AATT | 8 cut(s) | 152, 333, 395, 549, 1470, 1485, 1842, 2034 |
| SseBI | AGGCCT | 1 cut(s) | 8 |
| SspMI | CTAG | 7 cut(s) | 23, 1556, 1799, 1904, 1967, 2285, 2459 |
| StuI | AGGCCT | 1 cut(s) | 8 |
| StyD4I | CCNGG | 3 cut(s) | 188, 312, 2590 |
| StyI | CCWWGG | 2 cut(s) | 1239, 1419 |
| TaaI | ACNGT | 1 cut(s) | 850 |
| TaiI | ACGT | 2 cut(s) | 540, 1004 |
| TaqI | TCGA | 6 cut(s) | 196, 570, 591, 855, 1100, 2546 |
| TasI | AATT | 8 cut(s) | 152, 333, 395, 549, 1470, 1485, 1842, 2034 |
| TatI | WGTACW | 1 cut(s) | 237 |
| TfiI | GAWTC | 1 cut(s) | 453 |
| Tru1I | TTAA | 1 cut(s) | 773 |
| Tru9I | TTAA | 1 cut(s) | 773 |
| TseFI | GTSAC | 1 cut(s) | 131 |
| TseI | GCWGC | 2 cut(s) | 15, 735 |
| Tsp45I | GTSAC | 1 cut(s) | 131 |
| TspDTI | ATGAA | 7 cut(s) | 165, 889, 1550, 1640, 1856, 1940, 2174 |
| TspGWI | ACGGA | 2 cut(s) | 407, 425 |
| Tth111I | GACNNNGTC | 2 cut(s) | 539, 2534 |
| VpaK11BI | GGWCC | 2 cut(s) | 244, 2056 |
| XapI | RAATTY | 2 cut(s) | 152, 549 |
| XceI | RCATGY | 1 cut(s) | 946 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 269 |
| XmnI | GAANNNNTTC | 2 cut(s) | 896, 1188 |
| XspI | CTAG | 7 cut(s) | 23, 1556, 1799, 1904, 1967, 2285, 2459 |
| Zsp2I | ATGCAT | 1 cut(s) | 2229 |