Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0015799

Physical Location & Seq

Genomic Coordinates Reverse (-)

7997228 .. 7999776

Gene Structure 2549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG090900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGAAAGCCTCAGGCTGCATACTATCTTTCTTTTTTGTCTTCTCTTCTATCTCATCCCTTTCTGTAGCTCTAACAGATGCCGAAGCGTCCTTTCTTGCCCGTCGCCAGCTGCTAACGCTCCCGGAAGGCGGTGACCTACCCGAAAACTACGAAAATGGGGTTGATCCGAACCTGAAGTTCCCTAACCCCAGGCTTCGACGTGCATACATTGCACTCCAGGCTTGGAAGAAGAGCATGTACTCCGACCCTCTAAAGACAACTGCAAACTGGGTTGGTCCTGATGTATGTAAATACACGGGAGTGTTCTGTGAAAAGGCTCTTGATGACCCAAAAATCGACGTCGTGGCCAGCATTGATCTCAATGGGGCTGACATTGCAGGATTCCTTCCTGCTGAGTTAGGCCTGTTACATGAGGTTGCGGTGTTCCACATCAACTCCAACAGGTTCTGTGGTATCGTGCCCCAAAGCTTTTGCCAGCTGAGTCTCCTCCACGAGTTTGATATCAGCAACAACCGGTTTGTGGGTGAATTCCCTAAGGTGGTTCACTGCCTTCCGGCCCTCAGGTACCTGGACATCAGGTACAATGACTTTGAGGGGTGTCTGCCACCTGAGCTATTCAATAAGGATCTGGATGCCTTGTTCCTCAACAACAACAGGTTCAGATGCAACATTCCAGAGACGATTGGCAACTCCAATGTCTCGGTCCTCGTCATCGCCAACAACAACTTCGAGGGTTGCATTCCTAGCAGCATCGGGAAAATGAGGAACTTGAACGAGCTGATCTTCTCGAACAACAAGCTAGGTGGGTGTGTGCCACCTGAGCTCTTCCAGATCTCGAACGTGACTGTGTTGGACATCAGTTCAAACACATTCAGCGGCATCCTGTCGAAATCGTTCAAAATCGAGAACGTGGAGGAGTTCAGCCTTGCAAACAACAACCTGACCGGGTTTGTTCCTGAGAGCATTTGCAAGTTGCCTGGCTTGAAGAACTTCACATTCTCCAACAACTTCTTCAACGGCGCGGCCAAAGAATGCGTGCCAACCTCAAGGCAGGACATGGTGATGGACGACACAAGCAACTGCTTACCAGACAGGCCTAAACAGAGGTCACCCAAAGAATGTCAAGCTGTGGTGAGCAAGCCAGTGGATTGCAGCAAGGCCAAGTGTGGAGGTGGCGGAGTGCCCTCAAAGCCGCCAAAGCAGGAGACACCAAAACCACACCCTCCTCCTCGCACCATACAGTCTCCTGTGGTTTTCTCACCACCACCAGTGCACTCTCCCCCACCACCGGCCCCCGTCCACTCTCCACCACCTCCAGTGAAATCTCCACCACCACCAGCACCGGTCCACTCTCCACCACCCCCAGTGCACTCTCCTCCACCACCGGTTCACTCTCCTCCACCACCCGTCCACTCTCCACCACCCCCAGTGCACTCTCCTCCTCCACCCTCCCCACCACCACCAGTGCACTCTCCACCACCTCCAGTCCACTCTCCTCCACCACCAGTGCACTCTCCTCCACCACCTGTCCACTCTCCACCACCCCCAGTGCACTCTCCCCCACCACCAGTCCACTCTCCACCACCTCCTGTGCACTCTCCCCCACCACCGGCTCCAGTGCACTCTCCACCACCTCCAGTGAAGTCTCCACCACCACCGGCTCCGGTCAACTCTCCACCACCTCCAGTGAAGTCTCCACCACCACCTGCACCGGTCCACTCTCCACCACCTCCCGTGCAGTCTCCACCACCACCGGCTCCGGTCAACTCTCCACCACCTCCAGTGAAGTCTCCACCACCACCTGCACCGGTCCACTCTCCACCACCTCCCGTGCAGTCTCCACCACCACCGGCTCCGGTCAACTCTCCACCACCTCCAGTGAAGTCTCCACCACCACCTGCACCGGTCCACTCCCCACCACCTCCCGTGCAGTCTCCTCCTCCGGCCTCACCACCACCGGCTCCGGTCAACTCTCCACCACCTCCAGTGAAATCTCCACCACCACCTGCACCGGTCAACTCTCCACCACCTCCAGTGCAGTCTCCTCCTCCGGCCTCACCACCACCAGCAGACGACTTCGTCCTCCCACCAAACCTGGGATTCCAATACCAATCACCGCCTCCACCTATGTTCCCAGGCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005198 GO:0005199 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8

Protein Analysis

714

Amino Acids

75.61

Weight (kDa)

7.88

Isoelectric Point (pI)

100.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	140 - 197	1.6e-06	Leucine rich repeat
LRR_8	PF13855	279 - 336	1.1e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015799)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06800
malus_domestica	MD05G1294100.v1.1 MD10G1272100.v1.1 MD10G1272200.v1.1
prunus_persica	Prupe.4G069900_v2.0.a1
pyrus_communis	pycom10g22760
rosa_chinensis	RchiOBHm_Chr5g0012341
rosa_laevigata	RLG00000031905
rosa_multiflora	Rmu_ssc0000217.1_g000010
rosa_rugosa	Rorug05G0000600
rosa_samantha	Rh5AG094700 Rh5BG090900 Rh5CG104000 Rh5DG090400
rosa_wichuraiana	Rw5G008270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	4 cut(s)	1714, 1810, 1906, 2014
AasI	GACNNNNNNGTC	1 cut(s)	2078
AatII	GACGTC	1 cut(s)	342
Acc36I	ACCTGC	4 cut(s)	1714, 1810, 1906, 2014
Acc65I	GGTACC	1 cut(s)	564
AccB1I	GGYRCC	1 cut(s)	564
AccII	CGCG	1 cut(s)	1022
AciI	CCGC	7 cut(s)	129, 419, 876, 1022, 1176, 1193, 2117
AclWI	GGATC	2 cut(s)	158, 633
AcoI	YGGCCR	2 cut(s)	345, 1023
AcsI	RAATTY	1 cut(s)	527
AcuI	CTGAAG	1 cut(s)	194
AcyI	GRCGYC	1 cut(s)	339
AfaI	GTAC	3 cut(s)	239, 566, 581
AfiI	CCNNNNNNNGG	6 cut(s)	128, 520, 538, 1288, 1609, 2096
AgeI	ACCGGT	7 cut(s)	513, 1342, 1384, 1711, 1807, 1903, 2011
AgsI	TTSAA	6 cut(s)	619, 772, 864, 898, 985, 1015
AjiI	CACGTC	1 cut(s)	200
AjnI	CCWGG	6 cut(s)	188, 216, 567, 976, 2094, 2134
AjuI	GAANNNNNNNTTGG	4 cut(s)	710, 742, 995, 1027
AleI	CACNNNNGTG	1 cut(s)	299
AloI	GAACNNNNNNTCC	2 cut(s)	623, 655
AluBI	AGCT	9 cut(s)	68, 109, 468, 478, 613, 778, 799, 823, 1127
AluI	AGCT	9 cut(s)	68, 109, 468, 478, 613, 778, 799, 823, 1127
Alw21I	GWGCWC	9 cut(s)	825, 1275, 1371, 1434, 1470, 1512, 1554, 1596, 1623
Alw44I	GTGCAC	8 cut(s)	1271, 1367, 1430, 1466, 1508, 1550, 1592, 1619
AlwI	GGATC	2 cut(s)	158, 633
AlwNI	CAGNNNCTG	1 cut(s)	447
AoxI	GGCC	9 cut(s)	345, 400, 555, 1023, 1094, 1158, 1290, 1944, 2052
ApaLI	GTGCAC	8 cut(s)	1271, 1367, 1430, 1466, 1508, 1550, 1592, 1619
ApeKI	GCWGC	4 cut(s)	15, 109, 747, 1152
ApoI	RAATTY	1 cut(s)	527
AsiGI	ACCGGT	7 cut(s)	513, 1342, 1384, 1711, 1807, 1903, 2011
Asp700I	GAANNNNTTC	2 cut(s)	893, 989
Asp718I	GGTACC	1 cut(s)	564
AspLEI	GCGC	1 cut(s)	1022
AspS9I	GGNCC	8 cut(s)	275, 556, 703, 1291, 1345, 1714, 1810, 1906
AsuC2I	CCSGG	2 cut(s)	122, 946
AsuHPI	GGTGA	9 cut(s)	143, 536, 1072, 1101, 1144, 1251, 1941, 2049, 2106
AvaII	GGWCC	6 cut(s)	275, 703, 1345, 1714, 1810, 1906
AxyI	CCTNAGG	3 cut(s)	10, 534, 560
BalI	TGGCCA	1 cut(s)	347
BanI	GGYRCC	1 cut(s)	564
BanII	GRGCYC	1 cut(s)	825
BarI	GAAGNNNNNNTAC	2 cut(s)	221, 253
BauI	CACGAG	1 cut(s)	491
BbsI	GAAGAC	1 cut(s)	31
Bbv12I	GWGCWC	9 cut(s)	825, 1275, 1371, 1434, 1470, 1512, 1554, 1596, 1623
BbvI	GCAGC	4 cut(s)	2, 96, 759, 1164
BccI	CCATC	1 cut(s)	1057
BceAI	ACGGC	1 cut(s)	1033
BciT130I	CCWGG	6 cut(s)	190, 218, 569, 978, 2096, 2136
BcnI	CCSGG	2 cut(s)	122, 946
BfaI	CTAG	2 cut(s)	744, 800
BfmI	CTRYAG	1 cut(s)	63
BfuAI	ACCTGC	4 cut(s)	1714, 1810, 1906, 2014
BglII	AGATCT	1 cut(s)	831
BisI	GCNGC	7 cut(s)	16, 110, 748, 877, 1023, 1153, 1193
BlsI	GCNGC	7 cut(s)	17, 111, 749, 878, 1024, 1154, 1194
Bme1390I	CCNGG	8 cut(s)	122, 190, 218, 569, 946, 978, 2096, 2136
Bme18I	GGWCC	6 cut(s)	275, 703, 1345, 1714, 1810, 1906
BmgBI	CACGTC	1 cut(s)	200
BmgT120I	GGNCC	8 cut(s)	275, 556, 703, 1291, 1345, 1714, 1810, 1906
BmiI	GGNNCC	7 cut(s)	566, 1293, 1614, 1662, 1758, 1854, 1962
BmrFI	CCNGG	8 cut(s)	122, 190, 218, 569, 946, 978, 2096, 2136
BmrI	ACTGGG	4 cut(s)	277, 1358, 1421, 1541
BmsI	GCATC	5 cut(s)	67, 622, 653, 759, 888
BmuI	ACTGGG	4 cut(s)	277, 1358, 1421, 1541
BpiI	GAAGAC	1 cut(s)	31
Bpu10I	CCTNAGC	2 cut(s)	609, 819
BpuEI	CTTGAG	1 cut(s)	1030
BpuMI	CCSGG	2 cut(s)	122, 946
BsaHI	GRCGYC	1 cut(s)	339
BsaJI	CCNNGG	3 cut(s)	188, 2095, 2134
BsaXI	ACNNNNNCTCC	2 cut(s)	419, 449
Bsc4I	CCNNNNNNNGG	6 cut(s)	128, 520, 538, 1288, 1609, 2096
Bse21I	CCTNAGG	3 cut(s)	10, 534, 560
Bse3DI	GCAATG	2 cut(s)	207, 372
BseBI	CCWGG	6 cut(s)	190, 218, 569, 978, 2096, 2136
BseDI	CCNNGG	3 cut(s)	188, 2095, 2134
BseGI	GGATG	3 cut(s)	53, 637, 879
BseLI	CCNNNNNNNGG	6 cut(s)	128, 520, 538, 1288, 1609, 2096
BseMI	GCAATG	2 cut(s)	207, 372
BseMII	CTCAG	7 cut(s)	24, 384, 470, 574, 600, 810, 948
BseXI	GCAGC	4 cut(s)	2, 96, 759, 1164
BsgI	GTGCAG	8 cut(s)	1692, 1757, 1788, 1853, 1884, 1949, 1992, 2057
Bsh1236I	CGCG	1 cut(s)	1022
BshFI	GGCC	9 cut(s)	347, 402, 557, 1025, 1096, 1160, 1292, 1946, 2054
BshNI	GGYRCC	1 cut(s)	564
BshTI	ACCGGT	7 cut(s)	513, 1342, 1384, 1711, 1807, 1903, 2011
BsiHKAI	GWGCWC	9 cut(s)	825, 1275, 1371, 1434, 1470, 1512, 1554, 1596, 1623
BslI	CCNNNNNNNGG	6 cut(s)	128, 520, 538, 1288, 1609, 2096
BsmBI	CGTCTC	1 cut(s)	671
BsmI	GAATGC	2 cut(s)	738, 1037
BsnI	GGCC	9 cut(s)	347, 402, 557, 1025, 1096, 1160, 1292, 1946, 2054
Bsp143I	GATC	5 cut(s)	163, 355, 625, 780, 831
BspACI	CCGC	7 cut(s)	129, 419, 876, 1022, 1176, 1193, 2117
BspANI	GGCC	9 cut(s)	347, 402, 557, 1025, 1096, 1160, 1292, 1946, 2054
BspCNI	CTCAG	7 cut(s)	23, 385, 471, 573, 601, 811, 949
BspFNI	CGCG	1 cut(s)	1022
BspLI	GGNNCC	7 cut(s)	566, 1293, 1614, 1662, 1758, 1854, 1962
BspMI	ACCTGC	4 cut(s)	1714, 1810, 1906, 2014
BspPI	GGATC	2 cut(s)	158, 633
BspQI	GCTCTTC	2 cut(s)	224, 830
BspT107I	GGYRCC	1 cut(s)	564
BsrDI	GCAATG	2 cut(s)	207, 372
BssECI	CCNNGG	3 cut(s)	188, 2095, 2134
BssMI	GATC	5 cut(s)	163, 355, 625, 780, 831
BssNI	GRCGYC	1 cut(s)	339
BssSI	CACGAG	1 cut(s)	491
Bst2BI	CACGAG	1 cut(s)	491
Bst2UI	CCWGG	6 cut(s)	190, 218, 569, 978, 2096, 2136
Bst4CI	ACNGT	2 cut(s)	847, 1242
Bst6I	CTCTTC	3 cut(s)	49, 224, 830
BstACI	GRCGYC	1 cut(s)	339
BstAPI	GCANNNNNTGC	1 cut(s)	209
BstC8I	GCNNGC	5 cut(s)	107, 349, 476, 1037, 1139
BstDEI	CTNAG	8 cut(s)	10, 393, 479, 534, 560, 609, 819, 957
BstEII	GGTNACC	2 cut(s)	131, 1107
BstF5I	GGATG	3 cut(s)	53, 637, 879
BstFNI	CGCG	1 cut(s)	1022
BstHHI	GCGC	1 cut(s)	1022
BstKTI	GATC	5 cut(s)	166, 358, 628, 783, 834
BstMBI	GATC	5 cut(s)	163, 355, 625, 780, 831
BstMWI	GCNNNNNNNGC	9 cut(s)	115, 209, 218, 374, 610, 744, 820, 1189, 1198
BstNI	CCWGG	6 cut(s)	190, 218, 569, 978, 2096, 2136
BstNSI	RCATGY	1 cut(s)	238
BstPI	GGTNACC	2 cut(s)	131, 1107
BstSCI	CCNGG	8 cut(s)	120, 188, 216, 567, 944, 976, 2094, 2134
BstSFI	CTRYAG	1 cut(s)	63
BstUI	CGCG	1 cut(s)	1022
BstV1I	GCAGC	4 cut(s)	2, 96, 759, 1164
BstV2I	GAAGAC	1 cut(s)	31
BstX2I	RGATCY	2 cut(s)	625, 831
BstYI	RGATCY	2 cut(s)	625, 831
Bsu36I	CCTNAGG	3 cut(s)	10, 534, 560
BsuRI	GGCC	9 cut(s)	347, 402, 557, 1025, 1096, 1160, 1292, 1946, 2054
BtgZI	GCGATG	1 cut(s)	697
BtrI	CACGTC	1 cut(s)	200
BtsCI	GGATG	3 cut(s)	53, 637, 879
BtsI	GCAGTG	1 cut(s)	544
BveI	ACCTGC	4 cut(s)	1714, 1810, 1906, 2014
Cac8I	GCNNGC	5 cut(s)	107, 349, 476, 1037, 1139
CaiI	CAGNNNCTG	1 cut(s)	447
CfoI	GCGC	1 cut(s)	1022
Cfr13I	GGNCC	8 cut(s)	275, 556, 703, 1291, 1345, 1714, 1810, 1906
CseI	GACGC	1 cut(s)	75
Csp6I	GTAC	3 cut(s)	238, 565, 580
CspAI	ACCGGT	7 cut(s)	513, 1342, 1384, 1711, 1807, 1903, 2011
CspCI	CAANNNNNGTGG	2 cut(s)	784, 819
CviAII	CATG	3 cut(s)	235, 410, 1057
CviQI	GTAC	3 cut(s)	238, 565, 580
DdeI	CTNAG	8 cut(s)	10, 393, 479, 534, 560, 609, 819, 957
DpnI	GATC	5 cut(s)	165, 357, 627, 782, 833
DpnII	GATC	5 cut(s)	163, 355, 625, 780, 831
DrdI	GACNNNNNNGTC	1 cut(s)	2078
DseDI	GACNNNNNNGTC	1 cut(s)	2078
EaeI	YGGCCR	2 cut(s)	345, 1023
Eam1104I	CTCTTC	3 cut(s)	49, 224, 830
EarI	CTCTTC	3 cut(s)	49, 224, 830
EciI	GGCGGA	1 cut(s)	1191
Ecl136II	GAGCTC	1 cut(s)	823
Eco147I	AGGCCT	2 cut(s)	402, 1096
Eco24I	GRGCYC	1 cut(s)	825
Eco32I	GATATC	1 cut(s)	502
Eco47I	GGWCC	6 cut(s)	275, 703, 1345, 1714, 1810, 1906
Eco53kI	GAGCTC	1 cut(s)	823
Eco57I	CTGAAG	1 cut(s)	194
Eco81I	CCTNAGG	3 cut(s)	10, 534, 560
Eco91I	GGTNACC	2 cut(s)	131, 1107
EcoICRI	GAGCTC	1 cut(s)	823
EcoO65I	GGTNACC	2 cut(s)	131, 1107
EcoRI	GAATTC	1 cut(s)	527
EcoRII	CCWGG	6 cut(s)	188, 216, 567, 976, 2094, 2134
EcoRV	GATATC	1 cut(s)	502
EcoT38I	GRGCYC	1 cut(s)	825
Esp3I	CGTCTC	1 cut(s)	671
FaeI	CATG	3 cut(s)	238, 413, 1060
FaiI	YATR	8 cut(s)	20, 205, 236, 286, 411, 1058, 1238, 2129
FatI	CATG	3 cut(s)	234, 409, 1056
Fnu4HI	GCNGC	7 cut(s)	16, 110, 748, 877, 1023, 1153, 1193
FokI	GGATG	3 cut(s)	40, 644, 866
FriOI	GRGCYC	1 cut(s)	825
Fsp4HI	GCNGC	7 cut(s)	16, 110, 748, 877, 1023, 1153, 1193
FspBI	CTAG	2 cut(s)	744, 800
GlaI	GCGC	1 cut(s)	1021
GluI	GCNGC	7 cut(s)	16, 110, 748, 877, 1023, 1153, 1193
HaeIII	GGCC	9 cut(s)	347, 402, 557, 1025, 1096, 1160, 1292, 1946, 2054
HgaI	GACGC	1 cut(s)	75
HhaI	GCGC	1 cut(s)	1022
Hin1I	GRCGYC	1 cut(s)	339
Hin1II	CATG	3 cut(s)	238, 413, 1060
Hin6I	GCGC	1 cut(s)	1020
HinP1I	GCGC	1 cut(s)	1020
HincII	GTYRAC	5 cut(s)	1669, 1765, 1861, 1969, 2017
HindII	GTYRAC	5 cut(s)	1669, 1765, 1861, 1969, 2017
HindIII	AAGCTT	1 cut(s)	466
HinfI	GANTC	3 cut(s)	381, 481, 2100
HphI	GGTGA	9 cut(s)	143, 536, 1072, 1101, 1144, 1251, 1941, 2049, 2106
Hpy188I	TCNGA	3 cut(s)	168, 244, 662
Hpy99I	CGWCG	4 cut(s)	105, 201, 341, 344
HpyAV	CCTTC	3 cut(s)	119, 395, 560
HpyCH4III	ACNGT	2 cut(s)	847, 1242
HpyCH4IV	ACGT	4 cut(s)	199, 339, 840, 909
HpyF10VI	GCNNNNNNNGC	9 cut(s)	115, 209, 218, 374, 610, 744, 820, 1189, 1198
HpyF3I	CTNAG	8 cut(s)	10, 393, 479, 534, 560, 609, 819, 957
HpySE526I	ACGT	4 cut(s)	199, 339, 840, 909
Hsp92I	GRCGYC	1 cut(s)	339
Hsp92II	CATG	3 cut(s)	238, 413, 1060
HspAI	GCGC	1 cut(s)	1020
KpnI	GGTACC	1 cut(s)	568
Kzo9I	GATC	5 cut(s)	163, 355, 625, 780, 831
LguI	GCTCTTC	2 cut(s)	224, 830
LmnI	GCTCC	6 cut(s)	123, 1618, 1666, 1762, 1858, 1966
Lsp1109I	GCAGC	4 cut(s)	2, 96, 759, 1164
LweI	GCATC	5 cut(s)	67, 622, 653, 759, 888
MaeI	CTAG	2 cut(s)	744, 800
MaeII	ACGT	4 cut(s)	199, 339, 840, 909
MaeIII	GTNAC	4 cut(s)	131, 405, 841, 1107
MalI	GATC	5 cut(s)	165, 357, 627, 782, 833
MboI	GATC	5 cut(s)	163, 355, 625, 780, 831
MboII	GAAGA	8 cut(s)	31, 36, 238, 241, 775, 817, 997, 1003
MflI	RGATCY	2 cut(s)	625, 831
MlsI	TGGCCA	1 cut(s)	347
MluCI	AATT	1 cut(s)	527
MluNI	TGGCCA	1 cut(s)	347
MlyI	GAGTC	1 cut(s)	490
MmeI	TCCRAC	4 cut(s)	267, 462, 831, 1026
Mox20I	TGGCCA	1 cut(s)	347
MroXI	GAANNNNTTC	2 cut(s)	893, 989
MscI	TGGCCA	1 cut(s)	347
MslI	CAYNNNNRTG	2 cut(s)	299, 1061
Msp20I	TGGCCA	1 cut(s)	347
MspA1I	CMGCKG	3 cut(s)	109, 478, 876
MspR9I	CCNGG	8 cut(s)	122, 190, 218, 569, 946, 978, 2096, 2136
Mva1269I	GAATGC	2 cut(s)	738, 1037
MvaI	CCWGG	6 cut(s)	190, 218, 569, 978, 2096, 2136
MvnI	CGCG	1 cut(s)	1022
MwoI	GCNNNNNNNGC	9 cut(s)	115, 209, 218, 374, 610, 744, 820, 1189, 1198
NciI	CCSGG	2 cut(s)	122, 946
NdeII	GATC	5 cut(s)	163, 355, 625, 780, 831
NlaIII	CATG	3 cut(s)	238, 413, 1060
NlaIV	GGNNCC	7 cut(s)	566, 1293, 1614, 1662, 1758, 1854, 1962
NmuCI	GTSAC	3 cut(s)	131, 841, 1107
NspI	RCATGY	1 cut(s)	238
OliI	CACNNNNGTG	1 cut(s)	299
PaqCI	CACCTGC	4 cut(s)	1714, 1810, 1906, 2014
PceI	AGGCCT	2 cut(s)	402, 1096
PciSI	GCTCTTC	2 cut(s)	224, 830
PctI	GAATGC	2 cut(s)	738, 1037
PdmI	GAANNNNTTC	2 cut(s)	893, 989
PfeI	GAWTC	2 cut(s)	381, 2100
PflFI	GACNNNGTC	1 cut(s)	2078
PfoI	TCCNGGA	1 cut(s)	120
PinAI	ACCGGT	7 cut(s)	513, 1342, 1384, 1711, 1807, 1903, 2011
PkrI	GCNGC	7 cut(s)	17, 111, 749, 878, 1024, 1154, 1194
PleI	GAGTC	1 cut(s)	489
PpsI	GAGTC	1 cut(s)	489
Psp124BI	GAGCTC	1 cut(s)	825
Psp6I	CCWGG	6 cut(s)	188, 216, 567, 976, 2094, 2134
PspEI	GGTNACC	2 cut(s)	131, 1107
PspGI	CCWGG	6 cut(s)	188, 216, 567, 976, 2094, 2134
PspN4I	GGNNCC	7 cut(s)	566, 1293, 1614, 1662, 1758, 1854, 1962
PspPI	GGNCC	8 cut(s)	275, 556, 703, 1291, 1345, 1714, 1810, 1906
PstNI	CAGNNNCTG	1 cut(s)	447
PsuI	RGATCY	2 cut(s)	625, 831
PsyI	GACNNNGTC	1 cut(s)	2078
PvuII	CAGCTG	2 cut(s)	109, 478
RsaI	GTAC	3 cut(s)	239, 566, 581
RsaNI	GTAC	3 cut(s)	238, 565, 580
RseI	CAYNNNNRTG	2 cut(s)	299, 1061
SacI	GAGCTC	1 cut(s)	825
SapI	GCTCTTC	2 cut(s)	224, 830
SatI	GCNGC	7 cut(s)	16, 110, 748, 877, 1023, 1153, 1193
Sau3AI	GATC	5 cut(s)	163, 355, 625, 780, 831
Sau96I	GGNCC	8 cut(s)	275, 556, 703, 1291, 1345, 1714, 1810, 1906
SchI	GAGTC	1 cut(s)	490
ScrFI	CCNGG	8 cut(s)	122, 190, 218, 569, 946, 978, 2096, 2136
SfaNI	GCATC	5 cut(s)	67, 622, 653, 759, 888
SfcI	CTRYAG	1 cut(s)	63
SinI	GGWCC	6 cut(s)	275, 703, 1345, 1714, 1810, 1906
SmiMI	CAYNNNNRTG	2 cut(s)	299, 1061
SmlI	CTYRAG	1 cut(s)	1045
SmoI	CTYRAG	1 cut(s)	1045
Sse9I	AATT	1 cut(s)	527
SseBI	AGGCCT	2 cut(s)	402, 1096
SsiI	CCGC	7 cut(s)	129, 419, 876, 1022, 1176, 1193, 2117
SspMI	CTAG	2 cut(s)	744, 800
SstI	GAGCTC	1 cut(s)	825
StuI	AGGCCT	2 cut(s)	402, 1096
StyD4I	CCNGG	8 cut(s)	120, 188, 216, 567, 944, 976, 2094, 2134
TaaI	ACNGT	2 cut(s)	847, 1242
TaiI	ACGT	4 cut(s)	202, 342, 843, 912
TaqI	TCGA	7 cut(s)	196, 336, 729, 788, 836, 887, 903
TaqII	GACCGA	1 cut(s)	691
TasI	AATT	1 cut(s)	527
TatI	WGTACW	1 cut(s)	237
TauI	GCSGC	3 cut(s)	879, 1025, 1195
TfiI	GAWTC	2 cut(s)	381, 2100
TseFI	GTSAC	3 cut(s)	131, 841, 1107
TseI	GCWGC	4 cut(s)	15, 109, 747, 1152
Tsp45I	GTSAC	3 cut(s)	131, 841, 1107
TspDTI	ATGAA	1 cut(s)	17
Tth111I	GACNNNGTC	1 cut(s)	2078
VneI	GTGCAC	8 cut(s)	1271, 1367, 1430, 1466, 1508, 1550, 1592, 1619
VpaK11BI	GGWCC	6 cut(s)	275, 703, 1345, 1714, 1810, 1906
XapI	RAATTY	1 cut(s)	527
XceI	RCATGY	1 cut(s)	238
XmnI	GAANNNNTTC	2 cut(s)	893, 989
XspI	CTAG	2 cut(s)	744, 800
ZraI	GACGTC	1 cut(s)	340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.