MD05G1338700.v1.1

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0011839
Physical Location & Seq
Reverse (-)
45999623 .. 46002325
2703 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1338700.v1.1.491

Sequence Viewer

Length: 2178 bp
ATGAACAAAACAAAACCAAATCCCAAACCTCTCCTCCTCGTAATTCTACTACCTTCGATCCTATCCTGCCAACCAGCTTTTGCCGTCGACTTTGTCTTCAACGGCTTCAACTCCTCCGACATGTTGCTCCTCTACAGCAACGCCACCGTCGAGTCTCGAACCCTAACGCTCACAAACGACACCAACTTCTCCATCGGTCGAGCTCTCTACAAATCCAAGATCCCTACCAAAGAACCTAACTCATCGTACGTATACCCTTTCTCAACTTCTTTCATTTTCTCCATTGCCCCTTACAAGAACACACTTGCCGGTCACGGCATGGTGTTCATTTTTGTGCCGCAAACTGGCATCAAGGGGACGAGCCCGGGCGAGCATCTCGGACTCTTCAACTTCACCAACGGCGGTAGCTCCGACAACCATGTTTTCGGTGTTGAATTTGATGTGTTTAAGAATGAGGAGTTTACGGATATTAGTGACAACCATGTCGGCATCGATCTGAATTCTCTTCTATCTGTCAAGGCACACGAGGCAGGGTTTTGGCCGGAAAATAGTGATGGAAGTGATGAAAAAAGTTTCAAGAAATTGAAGCTTAATAGTGGGGAAAATTACCAGGTTTGGATTGATTACAAGGATCTTTTGATCAATGTTACAATGGCGCGGGCCGGCGCAAAAAGGCCGAAAACACCGTTGTTGAGTTTTGGCTACAATTTGTCTGATGTATTGTTGGATGAAATGTTTATTGGGTTCACAAGTTCAACGGGGCAGTTAGTTGAGAGCCACAGGGTTTTGGCATGGAGTTTTAGCAATTCCAACTTTTCGTTGAGTGAGAGTTTGATCACTTCTGGTTTACCTTCTTTTGTGCTTCCAAAGAGTTCGATTTTCGCATCAAAAGGTTTCATTGCAGGGATCACAGTGGGTGGATTTTTTGTGATTTGTATACTTGCTCTGGTTTCTCTGTTTTTGTTCAAGGGGCATAGGAGGCTAGCTAGGGAGAGGGAGGAAATGGAAGATTGGGAATTGGAGTACTGGCCGCATAGAATTACTTACCAGGAAATCGAGACGTCGACGAAGGGTTTCGATGAAGAGAATGTGATCGGAGTTGGAGGCAATGGGAAGGTTTATAAGGGTGTTTTAGCAGGAGGGGCGGAGATCGCGGTGAAGCGCATCTCACACGAAAATGATGGGATGAGGGAATTCTTGGCTGAGATTTCAAGCATTGGGAGGTTGAAGCACAGAAATTTGGTAGGGTTGAGAGGTTGGTGCAAGCAAGAGAAAGGTAGATTCGTATTAGTGTATGATTACATGGAAAACGGGAGTTTGGACAAAAGGGTTTTTGATTGTGATGAGAATAAGATGTTGAATTTTGAAGACAGAATTAGGGTTTTGAAAGATGTGGCTTCAGGGGTGTTTTACTTGCATGAGGGTTGGGAATCCAAAGTCCTACATAGGGACATTAAGGCAAGTAATGTGTTACTTGATAAGGAAATGAATGGGAGGCTTGGGGATTTTGGGTTGGCAAGGATGCATGGACATGGTGAAGTGCTCGGCACCACTAGGGTTGTCGGAACAGTAGGTTACTTGGCCCCGGAAGTGATCCGGATGGGGCGAGCATCAGAGCAAACCGATATATTTGCGTTCGGGATCCTGATTTTGGAAGTGATGTGTGGGAGGAGGCCTCTAGAGGATGGGAGGCCACCTTTGGTGGAATGGGTGTGGAAACTTAAGGTGCAAGGAAACTTGTTACAAGCCTTTGATGAGAGGCTAAGGGCTAGGGGAGAGTTTGATGAGGAGGAAGTAGAAAGGGTTTTGCATTTGGGATTGTTGTGTGCATATCCTGACCCAAATGCTAGACCGTCGATGCGACAAGTGGTTAAAGTGTTGGAGGGGAAGAAGAACGATCAGCCGGACGAGTCGGAAACTGAGGACATGGATGCATATGTGCTCCGAAAGTTGCAATCCAAGGAGATGTGGTCGGATTTTTCACAAACTTTTGGGTATGGATCATATTCACACCCAACTTTTGAAGACATCAAGCAGTCCATATCCACTTCAACGTCTCTTTCTTGGTCCAATACTAGCACAGTGGAAGGTCTCGATTCGTACAACATTATGAGAAGGATGATAGAAAAAGAAGAACGAGAAAGTCAACTCAGAAGATCAGTAGCATCCCAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

726

Amino Acids

81.61

Weight (kDa)

5.78

Isoelectric Point (pI)

33.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 29 - 272 3.5e-66 Legume lectin domain
Lectin_L-type_dom PF18483 46 - 262 4e-10 Legume lectin beta-barrel domain
Pkinase PF00069 360 - 625 7.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 362 - 627 3e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011839)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G04960 AT4G04960
fragaria_vesca FvH4_3g09090
malus_domestica MD05G1338700.v1.1 MD10G1293700.v1.1
prunus_persica Prupe.4G048100_v2.0.a1
pyrus_communis pycom05g29000 pycom10g24560
rosa_chinensis RchiOBHm_Chr5g0008551
rosa_laevigata RLG00000031579 RLG00000031582
rosa_multiflora Rmu_sc0001665.1_g000016
rosa_roxburghii Rroxscaffold_1G00068000
rosa_rugosa Rorug04G0436600
rosa_samantha Rh5AG065400 Rh5BG062800 Rh5CG073000 Rh5DG063300
rosa_wichuraiana Rw5G005550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1122
AasI GACNNNNNNGTC 1 cut(s) 482
AatII GACGTC 1 cut(s) 1064
AccB1I GGYRCC 1 cut(s) 1547
AccI GTMKAC 4 cut(s) 87, 252, 937, 1064
AccII CGCG 2 cut(s) 658, 1154
AccIII TCCGGA 1 cut(s) 1596
AciI CCGC 6 cut(s) 338, 402, 658, 1031, 1145, 1154
AclWI GGATC 8 cut(s) 52, 214, 639, 914, 1588, 1636, 1649, 2008
AcoI YGGCCR 2 cut(s) 539, 1028
AcsI RAATTY 5 cut(s) 434, 499, 1193, 1237, 1360
AcuI CTGAAG 1 cut(s) 1383
AcyI GRCGYC 1 cut(s) 1061
AfaI GTAC 3 cut(s) 248, 1025, 2102
AfiI CCNNNNNNNGG 3 cut(s) 344, 1447, 1651
AflII CTTAAG 1 cut(s) 1721
AflIII ACRYGT 1 cut(s) 120
AjnI CCWGG 2 cut(s) 609, 1047
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
AluBI AGCT 5 cut(s) 77, 203, 408, 589, 986
AluI AGCT 5 cut(s) 77, 203, 408, 589, 986
Alw21I GWGCWC 3 cut(s) 205, 1545, 1944
Alw26I GTCTC 4 cut(s) 159, 1052, 2061, 2096
AlwI GGATC 8 cut(s) 52, 214, 639, 914, 1588, 1636, 1649, 2008
Ama87I CYCGRG 1 cut(s) 364
Aor13HI TCCGGA 1 cut(s) 1596
AoxI GGCC 7 cut(s) 539, 660, 674, 1028, 1581, 1673, 1691
ApoI RAATTY 5 cut(s) 434, 499, 1193, 1237, 1360
Asp700I GAANNNNTTC 1 cut(s) 1073
AspLEI GCGC 3 cut(s) 658, 668, 1164
AspS9I GGNCC 3 cut(s) 660, 1582, 2067
AsuC2I CCSGG 3 cut(s) 365, 366, 1586
AsuHPI GGTGA 3 cut(s) 385, 1168, 1547
AsuNHI GCTAGC 1 cut(s) 982
AvaI CYCGRG 1 cut(s) 364
AvaII GGWCC 1 cut(s) 2067
BamHI GGATCC 1 cut(s) 1641
BanI GGYRCC 1 cut(s) 1547
BanII GRGCYC 2 cut(s) 205, 365
BauI CACGAG 1 cut(s) 524
BbsI GAAGAC 3 cut(s) 88, 1374, 2031
Bbv12I GWGCWC 3 cut(s) 205, 1545, 1944
BccI CCATC 5 cut(s) 200, 548, 1175, 1594, 1679
BceAI ACGGC 4 cut(s) 68, 118, 331, 415
BcgI CGANNNNNNTGC 2 cut(s) 1613, 1647
BciT130I CCWGG 2 cut(s) 611, 1049
BclI TGATCA 2 cut(s) 639, 834
BcnI CCSGG 3 cut(s) 365, 366, 1586
BcoDI GTCTC 4 cut(s) 159, 1052, 2061, 2096
BfaI CTAG 7 cut(s) 983, 987, 1554, 1679, 1770, 1848, 2076
BfmI CTRYAG 1 cut(s) 133
BfrI CTTAAG 1 cut(s) 1721
BisI GCNGC 2 cut(s) 338, 1031
BlsI GCNGC 2 cut(s) 339, 1032
BmcAI AGTACT 1 cut(s) 1025
Bme1390I CCNGG 5 cut(s) 365, 366, 611, 1049, 1586
Bme18I GGWCC 1 cut(s) 2067
BmeT110I CYCGRG 1 cut(s) 364
BmgT120I GGNCC 3 cut(s) 660, 1582, 2067
BmiI GGNNCC 3 cut(s) 1549, 1584, 1643
BmrFI CCNGG 5 cut(s) 365, 366, 611, 1049, 1586
BmtI GCTAGC 1 cut(s) 986
BpiI GAAGAC 3 cut(s) 88, 1374, 2031
BplI GAGNNNNNCTC 2 cut(s) 1660, 1692
Bpu10I CCTNAGC 1 cut(s) 1763
BpuMI CCSGG 3 cut(s) 365, 366, 1586
Bsa29I ATCGAT 1 cut(s) 492
BsaAI YACGTR 1 cut(s) 250
BsaHI GRCGYC 1 cut(s) 1061
BsaI GGTCTC 1 cut(s) 2096
BsaJI CCNNGG 3 cut(s) 364, 1584, 1959
BsaWI WCCGGW 1 cut(s) 1596
BsaXI ACNNNNNCTCC 4 cut(s) 18, 48, 1955, 1985
Bsc4I CCNNNNNNNGG 3 cut(s) 344, 1447, 1651
Bse118I RCCGGY 2 cut(s) 308, 662
Bse1I ACTGG 2 cut(s) 349, 1031
Bse3DI GCAATG 3 cut(s) 282, 897, 1114
BseAI TCCGGA 1 cut(s) 1596
BseBI CCWGG 2 cut(s) 611, 1049
BseCI ATCGAT 1 cut(s) 492
BseDI CCNNGG 3 cut(s) 364, 1584, 1959
BseGI GGATG 8 cut(s) 733, 1191, 1527, 1605, 1690, 1936, 2124, 2165
BseLI CCNNNNNNNGG 3 cut(s) 344, 1447, 1651
BseMI GCAATG 3 cut(s) 282, 897, 1114
BseMII CTCAG 3 cut(s) 1194, 1911, 2164
BseNI ACTGG 2 cut(s) 349, 1031
BseRI GAGGAG 7 cut(s) 23, 26, 103, 119, 470, 1684, 1802
Bsh1236I CGCG 2 cut(s) 658, 1154
Bsh1285I CGRYCG 1 cut(s) 199
BshFI GGCC 7 cut(s) 541, 662, 676, 1030, 1583, 1675, 1693
BshNI GGYRCC 1 cut(s) 1547
BshVI ATCGAT 1 cut(s) 492
BsiEI CGRYCG 1 cut(s) 199
BsiHKAI GWGCWC 3 cut(s) 205, 1545, 1944
BsiHKCI CYCGRG 1 cut(s) 364
BsiSI CCGG 7 cut(s) 309, 365, 542, 663, 1586, 1597, 1904
BsiWI CGTACG 1 cut(s) 246
BslFI GGGAC 2 cut(s) 370, 1463
BslI CCNNNNNNNGG 3 cut(s) 344, 1447, 1651
BsmAI GTCTC 4 cut(s) 159, 1052, 2061, 2096
BsmBI CGTCTC 2 cut(s) 1052, 2061
BsmFI GGGAC 2 cut(s) 370, 1463
BsnI GGCC 7 cut(s) 541, 662, 676, 1030, 1583, 1675, 1693
Bso31I GGTCTC 1 cut(s) 2096
BsoBI CYCGRG 1 cut(s) 364
Bsp1286I GDGCHC 4 cut(s) 205, 365, 1545, 1944
Bsp13I TCCGGA 1 cut(s) 1596
BspACI CCGC 6 cut(s) 338, 402, 658, 1031, 1145, 1154
BspANI GGCC 7 cut(s) 541, 662, 676, 1030, 1583, 1675, 1693
BspCNI CTCAG 3 cut(s) 1195, 1912, 2163
BspDI ATCGAT 1 cut(s) 492
BspEI TCCGGA 1 cut(s) 1596
BspFNI CGCG 2 cut(s) 658, 1154
BspLI GGNNCC 3 cut(s) 1549, 1584, 1643
BspOI GCTAGC 1 cut(s) 986
BspPI GGATC 8 cut(s) 52, 214, 639, 914, 1588, 1636, 1649, 2008
BspT107I GGYRCC 1 cut(s) 1547
BspTI CTTAAG 1 cut(s) 1721
BspTNI GGTCTC 1 cut(s) 2096
BsrDI GCAATG 3 cut(s) 282, 897, 1114
BsrFI RCCGGY 2 cut(s) 308, 662
BsrI ACTGG 2 cut(s) 349, 1031
BssAI RCCGGY 2 cut(s) 308, 662
BssECI CCNNGG 3 cut(s) 364, 1584, 1959
BssNAI GTATAC 2 cut(s) 253, 938
BssNI GRCGYC 1 cut(s) 1061
BssSI CACGAG 1 cut(s) 524
BssT1I CCWWGG 1 cut(s) 1959
Bst1107I GTATAC 2 cut(s) 253, 938
Bst2BI CACGAG 1 cut(s) 524
Bst2UI CCWGG 2 cut(s) 611, 1049
Bst4CI ACNGT 6 cut(s) 148, 687, 913, 1570, 1854, 2083
Bst6I CTCTTC 3 cut(s) 389, 510, 1077
BstACI GRCGYC 1 cut(s) 1061
BstAFI CTTAAG 1 cut(s) 1721
BstBAI YACGTR 1 cut(s) 250
BstC8I GCNNGC 6 cut(s) 371, 660, 664, 984, 1265, 1608
BstDEI CTNAG 4 cut(s) 1203, 1763, 1920, 2150
BstF5I GGATG 8 cut(s) 733, 1191, 1527, 1605, 1690, 1936, 2124, 2165
BstFNI CGCG 2 cut(s) 658, 1154
BstHHI GCGC 3 cut(s) 658, 668, 1164
BstMAI GTCTC 4 cut(s) 159, 1052, 2061, 2096
BstMCI CGRYCG 1 cut(s) 199
BstMWI GCNNNNNNNGC 4 cut(s) 527, 979, 1142, 1151
BstNI CCWGG 2 cut(s) 611, 1049
BstNSI RCATGY 1 cut(s) 124
BstSCI CCNGG 5 cut(s) 363, 364, 609, 1047, 1584
BstSFI CTRYAG 1 cut(s) 133
BstSNI TACGTA 1 cut(s) 250
BstUI CGCG 2 cut(s) 658, 1154
BstV2I GAAGAC 3 cut(s) 88, 1374, 2031
BstX2I RGATCY 3 cut(s) 219, 631, 1641
BstYI RGATCY 3 cut(s) 219, 631, 1641
BstZ17I GTATAC 2 cut(s) 253, 938
Bsu15I ATCGAT 1 cut(s) 492
BsuRI GGCC 7 cut(s) 541, 662, 676, 1030, 1583, 1675, 1693
BsuTUI ATCGAT 1 cut(s) 492
BtsCI GGATG 8 cut(s) 733, 1191, 1527, 1605, 1690, 1936, 2124, 2165
BtsIMutI CAGTG 2 cut(s) 918, 2088
Cac8I GCNNGC 6 cut(s) 371, 660, 664, 984, 1265, 1608
CfoI GCGC 3 cut(s) 658, 668, 1164
Cfr10I RCCGGY 2 cut(s) 308, 662
Cfr13I GGNCC 3 cut(s) 660, 1582, 2067
Cfr9I CCCGGG 1 cut(s) 364
ClaI ATCGAT 1 cut(s) 492
CsiI ACCWGGT 1 cut(s) 609
Csp6I GTAC 3 cut(s) 247, 1024, 2101
CspCI CAANNNNNGTGG 2 cut(s) 1540, 1575
CviQI GTAC 3 cut(s) 247, 1024, 2101
DdeI CTNAG 4 cut(s) 1203, 1763, 1920, 2150
DrdI GACNNNNNNGTC 1 cut(s) 482
DseDI GACNNNNNNGTC 1 cut(s) 482
EaeI YGGCCR 2 cut(s) 539, 1028
Eam1104I CTCTTC 3 cut(s) 389, 510, 1077
EarI CTCTTC 3 cut(s) 389, 510, 1077
EciI GGCGGA 1 cut(s) 1160
Ecl136II GAGCTC 1 cut(s) 203
Eco105I TACGTA 1 cut(s) 250
Eco130I CCWWGG 1 cut(s) 1959
Eco147I AGGCCT 1 cut(s) 1675
Eco24I GRGCYC 2 cut(s) 205, 365
Eco31I GGTCTC 1 cut(s) 2096
Eco47I GGWCC 1 cut(s) 2067
Eco53kI GAGCTC 1 cut(s) 203
Eco57I CTGAAG 1 cut(s) 1383
Eco88I CYCGRG 1 cut(s) 364
EcoICRI GAGCTC 1 cut(s) 203
EcoRI GAATTC 2 cut(s) 499, 1193
EcoRII CCWGG 2 cut(s) 609, 1047
EcoT14I CCWWGG 1 cut(s) 1959
EcoT22I ATGCAT 2 cut(s) 1527, 1936
EcoT38I GRGCYC 2 cut(s) 205, 365
ErhI CCWWGG 1 cut(s) 1959
Esp3I CGTCTC 2 cut(s) 1052, 2061
FaqI GGGAC 2 cut(s) 370, 1463
FauI CCCGC 1 cut(s) 651
FauNDI CATATG 1 cut(s) 1936
FbaI TGATCA 2 cut(s) 639, 834
FblI GTMKAC 4 cut(s) 87, 252, 937, 1064
Fnu4HI GCNGC 2 cut(s) 338, 1031
FokI GGATG 8 cut(s) 740, 1198, 1534, 1612, 1697, 1943, 2131, 2152
FriOI GRGCYC 2 cut(s) 205, 365
Fsp4HI GCNGC 2 cut(s) 338, 1031
FspBI CTAG 7 cut(s) 983, 987, 1554, 1679, 1770, 1848, 2076
GlaI GCGC 3 cut(s) 657, 667, 1163
GluI GCNGC 2 cut(s) 338, 1031
HaeIII GGCC 7 cut(s) 541, 662, 676, 1030, 1583, 1675, 1693
HapII CCGG 7 cut(s) 309, 365, 542, 663, 1586, 1597, 1904
HhaI GCGC 3 cut(s) 658, 668, 1164
Hin1I GRCGYC 1 cut(s) 1061
Hin6I GCGC 3 cut(s) 656, 666, 1162
HinP1I GCGC 3 cut(s) 656, 666, 1162
HincII GTYRAC 3 cut(s) 88, 1065, 2147
HindII GTYRAC 3 cut(s) 88, 1065, 2147
HindIII AAGCTT 1 cut(s) 587
HinfI GANTC 6 cut(s) 152, 381, 1281, 1430, 1910, 2096
HpaII CCGG 7 cut(s) 309, 365, 542, 663, 1586, 1597, 1904
HphI GGTGA 3 cut(s) 385, 1168, 1547
Hpy166II GTNNAC 8 cut(s) 88, 253, 462, 747, 848, 938, 1065, 2147
Hpy188III TCNNGA 9 cut(s) 156, 577, 1057, 1597, 1639, 1645, 1679, 1835, 2093
Hpy8I GTNNAC 8 cut(s) 88, 253, 462, 747, 848, 938, 1065, 2147
Hpy99I CGWCG 5 cut(s) 89, 152, 1066, 1069, 1858
HpyAV CCTTC 6 cut(s) 63, 861, 1063, 1108, 2081, 2109
HpyCH4III ACNGT 6 cut(s) 148, 687, 913, 1570, 1854, 2083
HpyCH4IV ACGT 3 cut(s) 249, 1061, 2054
HpyCH4V TGCA 9 cut(s) 902, 1263, 1417, 1525, 1729, 1810, 1829, 1934, 1954
HpyF10VI GCNNNNNNNGC 4 cut(s) 527, 979, 1142, 1151
HpyF3I CTNAG 4 cut(s) 1203, 1763, 1920, 2150
HpySE526I ACGT 3 cut(s) 249, 1061, 2054
Hsp92I GRCGYC 1 cut(s) 1061
HspAI GCGC 3 cut(s) 656, 666, 1162
Kpn2I TCCGGA 1 cut(s) 1596
KroI GCCGGC 1 cut(s) 662
KroNI GCCGGC 1 cut(s) 664
Ksp22I TGATCA 2 cut(s) 639, 834
LmnI GCTCC 3 cut(s) 132, 413, 1947
MabI ACCWGGT 1 cut(s) 609
MaeI CTAG 7 cut(s) 983, 987, 1554, 1679, 1770, 1848, 2076
MaeII ACGT 3 cut(s) 249, 1061, 2054
MaeIII GTNAC 6 cut(s) 311, 473, 646, 1470, 1574, 1740
MfeI CAATTG 1 cut(s) 2171
MflI RGATCY 3 cut(s) 219, 631, 1641
MhlI GDGCHC 4 cut(s) 205, 365, 1545, 1944
MlyI GAGTC 3 cut(s) 161, 375, 1919
MmeI TCCRAC 9 cut(s) 141, 435, 705, 834, 1081, 1543, 1860, 1893, 1953
Mph1103I ATGCAT 2 cut(s) 1527, 1936
MroI TCCGGA 1 cut(s) 1596
MroNI GCCGGC 1 cut(s) 662
MroXI GAANNNNTTC 1 cut(s) 1073
MseI TTAA 5 cut(s) 447, 591, 1455, 1722, 1872
MslI CAYNNNNRTG 3 cut(s) 332, 1176, 1530
MspCI CTTAAG 1 cut(s) 1721
MspI CCGG 7 cut(s) 309, 365, 542, 663, 1586, 1597, 1904
MspR9I CCNGG 5 cut(s) 365, 366, 611, 1049, 1586
MunI CAATTG 1 cut(s) 2171
MvaI CCWGG 2 cut(s) 611, 1049
MvnI CGCG 2 cut(s) 658, 1154
MwoI GCNNNNNNNGC 4 cut(s) 527, 979, 1142, 1151
NaeI GCCGGC 1 cut(s) 664
NciI CCSGG 3 cut(s) 365, 366, 1586
NdeI CATATG 1 cut(s) 1936
NgoMIV GCCGGC 1 cut(s) 662
NheI GCTAGC 1 cut(s) 982
NlaIV GGNNCC 3 cut(s) 1549, 1584, 1643
NmeAIII GCCGAG 1 cut(s) 1524
NmuCI GTSAC 2 cut(s) 311, 473
NsiI ATGCAT 2 cut(s) 1527, 1936
NspI RCATGY 1 cut(s) 124
PceI AGGCCT 1 cut(s) 1675
PciI ACATGT 1 cut(s) 120
PcsI WCGNNNNNNNCGW 1 cut(s) 147
PdiI GCCGGC 1 cut(s) 664
PdmI GAANNNNTTC 1 cut(s) 1073
PfeI GAWTC 3 cut(s) 1281, 1430, 2096
Pfl23II CGTACG 1 cut(s) 246
PflFI GACNNNGTC 1 cut(s) 92
PkrI GCNGC 2 cut(s) 339, 1032
PleI GAGTC 3 cut(s) 160, 375, 1918
PpsI GAGTC 3 cut(s) 160, 375, 1918
Ppu21I YACGTR 1 cut(s) 250
PscI ACATGT 1 cut(s) 120
PsiI TTATAA 1 cut(s) 1122
Psp124BI GAGCTC 1 cut(s) 205
Psp6I CCWGG 2 cut(s) 609, 1047
PspGI CCWGG 2 cut(s) 609, 1047
PspLI CGTACG 1 cut(s) 246
PspN4I GGNNCC 3 cut(s) 1549, 1584, 1643
PspPI GGNCC 3 cut(s) 660, 1582, 2067
PsuI RGATCY 3 cut(s) 219, 631, 1641
PsyI GACNNNGTC 1 cut(s) 92
RsaI GTAC 3 cut(s) 248, 1025, 2102
RsaNI GTAC 3 cut(s) 247, 1024, 2101
RseI CAYNNNNRTG 3 cut(s) 332, 1176, 1530
SacI GAGCTC 1 cut(s) 205
SalI GTCGAC 2 cut(s) 86, 1063
SaqAI TTAA 5 cut(s) 447, 591, 1455, 1722, 1872
SatI GCNGC 2 cut(s) 338, 1031
Sau96I GGNCC 3 cut(s) 660, 1582, 2067
ScaI AGTACT 1 cut(s) 1025
SchI GAGTC 3 cut(s) 161, 375, 1919
ScrFI CCNGG 5 cut(s) 365, 366, 611, 1049, 1586
SduI GDGCHC 4 cut(s) 205, 365, 1545, 1944
SexAI ACCWGGT 1 cut(s) 609
SfcI CTRYAG 1 cut(s) 133
SgrDI CGTCGACG 1 cut(s) 1063
SinI GGWCC 1 cut(s) 2067
SmaI CCCGGG 1 cut(s) 366
SmiMI CAYNNNNRTG 3 cut(s) 332, 1176, 1530
SmlI CTYRAG 1 cut(s) 1721
SmoI CTYRAG 1 cut(s) 1721
SnaBI TACGTA 1 cut(s) 250
SrfI GCCCGGGC 1 cut(s) 366
SseBI AGGCCT 1 cut(s) 1675
SsiI CCGC 6 cut(s) 338, 402, 658, 1031, 1145, 1154
SspMI CTAG 7 cut(s) 983, 987, 1554, 1679, 1770, 1848, 2076
SstI GAGCTC 1 cut(s) 205
StuI AGGCCT 1 cut(s) 1675
StyD4I CCNGG 5 cut(s) 363, 364, 609, 1047, 1584
StyI CCWWGG 1 cut(s) 1959
TaaI ACNGT 6 cut(s) 148, 687, 913, 1570, 1854, 2083
TaiI ACGT 3 cut(s) 252, 1064, 2057
TaqII GACCGA 1 cut(s) 185
TatI WGTACW 1 cut(s) 1023
TauI GCSGC 2 cut(s) 340, 1033
TfiI GAWTC 3 cut(s) 1281, 1430, 2096
Tru1I TTAA 5 cut(s) 447, 591, 1455, 1722, 1872
Tru9I TTAA 5 cut(s) 447, 591, 1455, 1722, 1872
TscAI CASTG 2 cut(s) 918, 2088
TseFI GTSAC 2 cut(s) 311, 473
Tsp45I GTSAC 2 cut(s) 311, 473
TspDTI ATGAA 8 cut(s) 17, 262, 316, 579, 744, 886, 1095, 1502
TspGWI ACGGA 1 cut(s) 479
TspMI CCCGGG 1 cut(s) 364
TspRI CASTG 2 cut(s) 918, 2088
Tth111I GACNNNGTC 1 cut(s) 92
Vha464I CTTAAG 1 cut(s) 1721
VpaK11BI GGWCC 1 cut(s) 2067
XapI RAATTY 5 cut(s) 434, 499, 1193, 1237, 1360
XbaI TCTAGA 1 cut(s) 1678
XceI RCATGY 1 cut(s) 124
XmaI CCCGGG 1 cut(s) 364
XmiI GTMKAC 4 cut(s) 87, 252, 937, 1064
XmnI GAANNNNTTC 1 cut(s) 1073
XspI CTAG 7 cut(s) 983, 987, 1554, 1679, 1770, 1848, 2076
ZraI GACGTC 1 cut(s) 1062
ZrmI AGTACT 1 cut(s) 1025
Zsp2I ATGCAT 2 cut(s) 1527, 1936
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.