RchiOBHm_Chr5g0008551

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0011839
Physical Location & Seq
Forward (+)
5480735 .. 5483174
2440 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28951

Sequence Viewer

Length: 2055 bp
ATGAAAACCCTTCTCATCTTTCTTCTCCTCCTCTCCCTCCGACCCCTCTCCGCCTTCGATTTCATCTTCAACGGCTTTAACTCCTCCTCCAACCTCCTCCTCTTCGGCAACGCCACCGTCTCATCTCAAATCCTCACTATCACAAACGCCACCAGCTACTCCATCGGCCGAGCTCTCTACAAGTCCAAAATCCCAACCAAAGCTCCGAACTCTTCATACATCTACCCTTTCTCGACCTCCTTCGTCTTCTCCATCGCTCCTGACAAGAACACTCTCCCCGGCCACGGCATGGTCTTCATCTTCACGCCCGCCGAGGGCATAAACGGAACCAGCGCCAGCGAGCATTTAGGGTTGCTCAACTTCACAAACAGAGGCCAGTCGACGAACCACGTTTTTGGGGTCGAGTTCGATGTATTTAAGAACGAGGAGTTTAAGGACATTAGTAACAACCACGTCGGAATTGATGTGAACTCATTGGAGTCGGTTAATGCATCCGAAGCCGGGTATTGGAGTGAGGATAAGGTTTTCAAGAAGTTGAAGCTCAACAATGGTGAGAATTACCAGGCTTGGATTGATTATAGGGATTCGGTGATTAATGTGACTATGGTGAAAGCTGGGATGGCGAAGCCGAAGACTCCGTTGTTGAGTTATGTTTATAATCTTTCTGATGTTTTGGAGGATGAAATGTTTGTCGGCTTCACAGGCTCAACGGGGCAATTAGTCGAAAGTCACATGATTTTGGCTTGGAGTTTCAGCAATACTAATTTTTCTTTGGGTGAGAGTTTGATCACTTCTGGCTTGCCTAATTTTGTGCTTCCTGAGGCTTCGATTTTTAAGTCTAAAGGGTTTATTGCTGGAGTTACAGTTGGGGGTTTGTTTGTAGTTTGTGTGATTGCTCTGTTTACTCTGTTTTTGGTTAAGAGAAAAAGGAGGATGAAAAGGGAGAGAGGTGAAATGGAGGATTGGGAATTAGAGTATTGGCCTCACCGGATTACTTATTCGGAAATTGAGGCGGCGACGAAGGGGTTTCGGGAAGAAAATGTGATTGGAATTGGAGGGAATGGGAAGGTGTACAAGGGTGTTTTGGCAGGAGGGGCAGAGGTTGCGGTGAAGAGAATTTCACATGAGAATAATGGAATGAGAGAGTTCTTGGCTGAGATTTCAAGCATTGGGAGATTGAAGCATAGAAATTTGGTGGGATTGAGAGGTTGGTGTAAGAAAGAGAAGGGGAATTTCATGTTGGTCTATGATTATATGGAAAATGGGAGTTTGGATAAGTTGATTTTTGATTGTGATGAGAGTAAGATGTTGGGTTTTGAAGACAGGATTAGGGTTTTGAGAGATGTGGCTTCTGGGGTTTTGTACTTACATGAAGGATGGGAATCTAAAGTGTTGCACAGGGACATTAAGGCAAGCAATGTGTTACTTGATAGGGAAATGAATGGAAGGTTAGGGGATTTCGGGTTGGCGAGGATGCACGGGCATGGTGATGTGCCCGGCACTACTCGGGTGGTAGGAACCGTGGGGTACTTGGCCCCGGAAATCATTCACGTAGGGCGAGCGTCCGCCCAGACGGACGTTTTCGGGTTCGGGATCTTGATTTTAGAAGTGATGTGTGGGAGGAGGCCTATAGAGGAAGGGAAGCCACCCTTGGTGGAATGGGTGTGGCAACTCATGGTGAAAGGGCAATTGCTAAATGCGTTTGATGAGAGGTTGAGGGGCAGAGGTTTGGGGTTAAGTGAAGAGGAGGTGGAGAGAGTTTTACATTTGGGTTTGTTGTGTGCTTACCCCGAGCCAAATGCAAGACCATCAATGAGGCAAGTGGTGAAAGTTTTGGAGGGGAAGAATGACAATGAGGGCTGCGATGAGTCTGAAACTGAGGAAATGGATGCTTATTTGGTTCAGAAATTGCAATCCAAGGACACGTGGTCTGAGTTTTCACATAATTTTGGTTATGGATTATCATCACACCCAACTTTTCAAGATATCAAGCAGTCAATATCCAACTCAATGTCTCTCTCTTGGTCCAGTACTAATATAGTGGAGGGTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

684

Amino Acids

76.33

Weight (kDa)

6.04

Isoelectric Point (pI)

28.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 20 - 255 1e-68 Legume lectin domain
Lectin_L-type_dom PF18483 30 - 244 9.2e-11 Legume lectin beta-barrel domain
Pkinase PF00069 344 - 609 5.4e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 346 - 612 4.5e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011839)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G04960 AT4G04960
fragaria_vesca FvH4_3g09090
malus_domestica MD05G1338700.v1.1 MD10G1293700.v1.1
prunus_persica Prupe.4G048100_v2.0.a1
pyrus_communis pycom05g29000 pycom10g24560
rosa_chinensis RchiOBHm_Chr5g0008551
rosa_laevigata RLG00000031579 RLG00000031582
rosa_multiflora Rmu_sc0001665.1_g000016
rosa_roxburghii Rroxscaffold_1G00068000
rosa_rugosa Rorug04G0436600
rosa_samantha Rh5AG065400 Rh5BG062800 Rh5CG073000 Rh5DG063300
rosa_wichuraiana Rw5G005550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 657
AccB7I CCANNNNNTGG 1 cut(s) 289
AccI GTMKAC 1 cut(s) 380
AciI CCGC 5 cut(s) 51, 309, 1013, 1106, 1566
AclWI GGATC 1 cut(s) 1601
AcoI YGGCCR 2 cut(s) 166, 280
AcsI RAATTY 3 cut(s) 1116, 1189, 1231
AcvI CACGTG 1 cut(s) 1926
AfaI GTAC 4 cut(s) 1073, 1364, 1529, 2032
AfiI CCNNNNNNNGG 5 cut(s) 284, 289, 314, 501, 507
AflIII ACRYGT 1 cut(s) 1923
AgsI TTSAA 7 cut(s) 70, 529, 538, 1164, 1180, 1319, 1982
AhdI GACNNNNNGTC 1 cut(s) 1927
AjiI CACGTC 1 cut(s) 454
AjnI CCWGG 1 cut(s) 561
AjuI GAANNNNNNNTTGG 6 cut(s) 1029, 1061, 1223, 1255, 1634, 1666
AluBI AGCT 5 cut(s) 156, 173, 203, 541, 614
AluI AGCT 5 cut(s) 156, 173, 203, 541, 614
Alw21I GWGCWC 1 cut(s) 175
Alw26I GTCTC 2 cut(s) 124, 2019
AlwI GGATC 1 cut(s) 1601
Ama87I CYCGRG 2 cut(s) 1506, 1790
AoxI GGCC 6 cut(s) 166, 280, 373, 980, 1533, 1625
ApeKI GCWGC 1 cut(s) 1860
ApoI RAATTY 3 cut(s) 1116, 1189, 1231
AseI ATTAAT 1 cut(s) 594
Asp700I GAANNNNTTC 1 cut(s) 1545
AspLEI GCGC 1 cut(s) 335
AspS9I GGNCC 2 cut(s) 1534, 2025
AsuC2I CCSGG 4 cut(s) 279, 502, 1497, 1538
AvaI CYCGRG 2 cut(s) 1506, 1790
AvaII GGWCC 1 cut(s) 2025
AxyI CCTNAGG 1 cut(s) 819
BaeGI GKGCMC 1 cut(s) 1497
BanII GRGCYC 1 cut(s) 175
BbrPI CACGTG 1 cut(s) 1926
BbsI GAAGAC 4 cut(s) 238, 286, 638, 1326
Bbv12I GWGCWC 1 cut(s) 175
BbvI GCAGC 1 cut(s) 1847
BccI CCATC 5 cut(s) 170, 260, 613, 1371, 1816
BceAI ACGGC 2 cut(s) 88, 301
BcgI CGANNNNNNTGC 2 cut(s) 1781, 1815
BciT130I CCWGG 1 cut(s) 563
BclI TGATCA 1 cut(s) 786
BcnI CCSGG 4 cut(s) 279, 502, 1497, 1538
BcoDI GTCTC 2 cut(s) 124, 2019
BfmI CTRYAG 1 cut(s) 1629
BfoI RGCGCY 1 cut(s) 336
BisI GCNGC 2 cut(s) 1014, 1861
BlsI GCNGC 2 cut(s) 1015, 1862
BmcAI AGTACT 1 cut(s) 2032
Bme1390I CCNGG 5 cut(s) 279, 502, 563, 1497, 1538
Bme18I GGWCC 1 cut(s) 2025
BmeRI GACNNNNNGTC 1 cut(s) 1927
BmeT110I CYCGRG 2 cut(s) 1506, 1790
BmgBI CACGTC 1 cut(s) 454
BmgT120I GGNCC 2 cut(s) 1534, 2025
BmiI GGNNCC 3 cut(s) 328, 1519, 1536
BmrFI CCNGG 5 cut(s) 279, 502, 563, 1497, 1538
BmsI GCATC 3 cut(s) 500, 1464, 1879
BpiI GAAGAC 4 cut(s) 238, 286, 638, 1326
BpmI CTGGAG 1 cut(s) 876
BpuMI CCSGG 4 cut(s) 279, 502, 1497, 1538
BsaAI YACGTR 2 cut(s) 1552, 1926
BsaBI GATNNNNATC 2 cut(s) 1381, 1963
BsaJI CCNNGG 7 cut(s) 277, 283, 312, 1521, 1536, 1650, 1917
BsaWI WCCGGW 1 cut(s) 987
BsaXI ACNNNNNCTCC 7 cut(s) 71, 101, 187, 217, 849, 879, 2036
Bsc4I CCNNNNNNNGG 5 cut(s) 284, 289, 314, 501, 507
Bse1I ACTGG 2 cut(s) 376, 2028
Bse21I CCTNAGG 1 cut(s) 819
Bse3DI GCAATG 1 cut(s) 1423
Bse8I GATNNNNATC 2 cut(s) 1381, 1963
BseBI CCWGG 1 cut(s) 563
BseDI CCNNGG 7 cut(s) 277, 283, 312, 1521, 1536, 1650, 1917
BseGI GGATG 7 cut(s) 491, 624, 685, 939, 1382, 1479, 1894
BseJI GATNNNNATC 2 cut(s) 1381, 1963
BseLI CCNNNNNNNGG 5 cut(s) 284, 289, 314, 501, 507
BseMI GCAATG 1 cut(s) 1423
BseMII CTCAG 4 cut(s) 810, 1146, 1869, 1923
BseNI ACTGG 2 cut(s) 376, 2028
BseRI GAGGAG 9 cut(s) 17, 20, 73, 76, 86, 89, 440, 1636, 1760
BseSI GKGCMC 1 cut(s) 1497
BseX3I CGGCCG 1 cut(s) 166
BseXI GCAGC 1 cut(s) 1847
BseYI CCCAGC 1 cut(s) 614
Bsh1285I CGRYCG 1 cut(s) 169
BshFI GGCC 6 cut(s) 168, 282, 375, 982, 1535, 1627
BsiEI CGRYCG 1 cut(s) 169
BsiHKAI GWGCWC 1 cut(s) 175
BsiHKCI CYCGRG 2 cut(s) 1506, 1790
BsiSI CCGG 5 cut(s) 279, 501, 988, 1497, 1538
BslFI GGGAC 1 cut(s) 1415
BslI CCNNNNNNNGG 5 cut(s) 284, 289, 314, 501, 507
BsmAI GTCTC 2 cut(s) 124, 2019
BsmBI CGTCTC 1 cut(s) 124
BsmFI GGGAC 1 cut(s) 1415
BsnI GGCC 6 cut(s) 168, 282, 375, 982, 1535, 1627
BsoBI CYCGRG 2 cut(s) 1506, 1790
Bsp1286I GDGCHC 2 cut(s) 175, 1497
Bsp1407I TGTACA 1 cut(s) 1071
Bsp143I GATC 2 cut(s) 786, 1593
BspACI CCGC 5 cut(s) 51, 309, 1013, 1106, 1566
BspANI GGCC 6 cut(s) 168, 282, 375, 982, 1535, 1627
BspCNI CTCAG 4 cut(s) 811, 1147, 1870, 1924
BspLI GGNNCC 3 cut(s) 328, 1519, 1536
BspPI GGATC 1 cut(s) 1601
BsrDI GCAATG 1 cut(s) 1423
BsrGI TGTACA 1 cut(s) 1071
BsrI ACTGG 2 cut(s) 376, 2028
BssECI CCNNGG 7 cut(s) 277, 283, 312, 1521, 1536, 1650, 1917
BssMI GATC 2 cut(s) 786, 1593
BssT1I CCWWGG 2 cut(s) 1650, 1917
Bst2UI CCWGG 1 cut(s) 563
Bst4CI ACNGT 3 cut(s) 118, 865, 1522
Bst6I CTCTTC 4 cut(s) 107, 217, 1106, 1737
BstAPI GCANNNNNTGC 1 cut(s) 1103
BstAUI TGTACA 1 cut(s) 1071
BstBAI YACGTR 2 cut(s) 1552, 1926
BstC8I GCNNGC 6 cut(s) 309, 337, 341, 800, 1414, 1560
BstDEI CTNAG 4 cut(s) 819, 1155, 1878, 1932
BstDSI CCRYGG 2 cut(s) 283, 1521
BstF5I GGATG 7 cut(s) 491, 624, 685, 939, 1382, 1479, 1894
BstH2I RGCGCY 1 cut(s) 336
BstHHI GCGC 1 cut(s) 335
BstKTI GATC 2 cut(s) 789, 1596
BstMAI GTCTC 2 cut(s) 124, 2019
BstMBI GATC 2 cut(s) 786, 1593
BstMCI CGRYCG 1 cut(s) 169
BstMWI GCNNNNNNNGC 5 cut(s) 497, 620, 702, 1094, 1103
BstNI CCWGG 1 cut(s) 563
BstSCI CCNGG 5 cut(s) 277, 500, 561, 1495, 1536
BstSFI CTRYAG 1 cut(s) 1629
BstSLI GKGCMC 1 cut(s) 1497
BstV1I GCAGC 1 cut(s) 1847
BstV2I GAAGAC 4 cut(s) 238, 286, 638, 1326
BstX2I RGATCY 1 cut(s) 1593
BstXI CCANNNNNNTGG 1 cut(s) 395
BstYI RGATCY 1 cut(s) 1593
BstZI CGGCCG 1 cut(s) 166
Bsu36I CCTNAGG 1 cut(s) 819
BsuRI GGCC 6 cut(s) 168, 282, 375, 982, 1535, 1627
BtgI CCRYGG 2 cut(s) 283, 1521
BtgZI GCGATG 2 cut(s) 238, 1878
BtrI CACGTC 1 cut(s) 454
BtsCI GGATG 7 cut(s) 491, 624, 685, 939, 1382, 1479, 1894
Cac8I GCNNGC 6 cut(s) 309, 337, 341, 800, 1414, 1560
CfoI GCGC 1 cut(s) 335
Cfr13I GGNCC 2 cut(s) 1534, 2025
CseI GACGC 1 cut(s) 1551
Csp6I GTAC 4 cut(s) 1072, 1363, 1528, 2031
CviAII CATG 7 cut(s) 289, 733, 1124, 1237, 1370, 1484, 1675
CviQI GTAC 4 cut(s) 1072, 1363, 1528, 2031
DdeI CTNAG 4 cut(s) 819, 1155, 1878, 1932
DpnI GATC 2 cut(s) 788, 1595
DpnII GATC 2 cut(s) 786, 1593
DriI GACNNNNNGTC 1 cut(s) 1927
EaeI YGGCCR 2 cut(s) 166, 280
EagI CGGCCG 1 cut(s) 166
Eam1104I CTCTTC 4 cut(s) 107, 217, 1106, 1737
Eam1105I GACNNNNNGTC 1 cut(s) 1927
EarI CTCTTC 4 cut(s) 107, 217, 1106, 1737
EciI GGCGGA 2 cut(s) 40, 1555
Ecl136II GAGCTC 1 cut(s) 173
EclXI CGGCCG 1 cut(s) 166
Eco130I CCWWGG 2 cut(s) 1650, 1917
Eco147I AGGCCT 1 cut(s) 1627
Eco24I GRGCYC 1 cut(s) 175
Eco32I GATATC 1 cut(s) 1987
Eco47I GGWCC 1 cut(s) 2025
Eco52I CGGCCG 1 cut(s) 166
Eco53kI GAGCTC 1 cut(s) 173
Eco72I CACGTG 1 cut(s) 1926
Eco81I CCTNAGG 1 cut(s) 819
Eco88I CYCGRG 2 cut(s) 1506, 1790
EcoICRI GAGCTC 1 cut(s) 173
EcoRII CCWGG 1 cut(s) 561
EcoRV GATATC 1 cut(s) 1987
EcoT14I CCWWGG 2 cut(s) 1650, 1917
EcoT22I ATGCAT 1 cut(s) 493
EcoT38I GRGCYC 1 cut(s) 175
ErhI CCWWGG 2 cut(s) 1650, 1917
Esp3I CGTCTC 1 cut(s) 124
FaeI CATG 7 cut(s) 292, 736, 1127, 1240, 1373, 1487, 1678
FalI AAGNNNNNCTT 2 cut(s) 1634, 1666
FaqI GGGAC 1 cut(s) 1415
FatI CATG 7 cut(s) 288, 732, 1123, 1236, 1369, 1483, 1674
FauI CCCGC 1 cut(s) 316
FbaI TGATCA 1 cut(s) 786
FblI GTMKAC 1 cut(s) 380
Fnu4HI GCNGC 2 cut(s) 1014, 1861
FokI GGATG 7 cut(s) 478, 631, 692, 946, 1389, 1486, 1901
FriOI GRGCYC 1 cut(s) 175
Fsp4HI GCNGC 2 cut(s) 1014, 1861
GlaI GCGC 1 cut(s) 334
GluI GCNGC 2 cut(s) 1014, 1861
GsaI CCCAGC 1 cut(s) 618
GsuI CTGGAG 1 cut(s) 876
HaeII RGCGCY 1 cut(s) 336
HaeIII GGCC 6 cut(s) 168, 282, 375, 982, 1535, 1627
HapII CCGG 5 cut(s) 279, 501, 988, 1497, 1538
HgaI GACGC 1 cut(s) 1551
HhaI GCGC 1 cut(s) 335
Hin1II CATG 7 cut(s) 292, 736, 1127, 1240, 1373, 1487, 1678
Hin6I GCGC 1 cut(s) 333
HinP1I GCGC 1 cut(s) 333
HincII GTYRAC 1 cut(s) 381
HindII GTYRAC 1 cut(s) 381
HinfI GANTC 5 cut(s) 479, 584, 634, 1382, 1868
HpaII CCGG 5 cut(s) 279, 501, 988, 1497, 1538
Hpy166II GTNNAC 4 cut(s) 381, 469, 903, 1072
Hpy188I TCNGA 9 cut(s) 41, 207, 458, 496, 667, 1003, 1873, 1905, 1933
Hpy188III TCNNGA 8 cut(s) 232, 260, 529, 818, 1031, 1591, 1597, 1982
Hpy8I GTNNAC 4 cut(s) 381, 469, 903, 1072
Hpy99I CGWCG 3 cut(s) 385, 458, 1021
HpyAV CCTTC 9 cut(s) 20, 64, 250, 1015, 1060, 1219, 1367, 1440, 1631
HpyCH4III ACNGT 3 cut(s) 118, 865, 1522
HpyCH4IV ACGT 5 cut(s) 390, 453, 1551, 1578, 1925
HpyCH4V TGCA 5 cut(s) 491, 1396, 1477, 1802, 1912
HpyF10VI GCNNNNNNNGC 5 cut(s) 497, 620, 702, 1094, 1103
HpyF3I CTNAG 4 cut(s) 819, 1155, 1878, 1932
HpySE526I ACGT 5 cut(s) 390, 453, 1551, 1578, 1925
Hsp92II CATG 7 cut(s) 292, 736, 1127, 1240, 1373, 1487, 1678
HspAI GCGC 1 cut(s) 333
Ksp22I TGATCA 1 cut(s) 786
Kzo9I GATC 2 cut(s) 786, 1593
LmnI GCTCC 2 cut(s) 208, 262
Lsp1109I GCAGC 1 cut(s) 1847
LweI GCATC 3 cut(s) 500, 1464, 1879
MaeII ACGT 5 cut(s) 390, 453, 1551, 1578, 1925
MaeIII GTNAC 5 cut(s) 443, 598, 728, 859, 1422
MalI GATC 2 cut(s) 788, 1595
MboI GATC 2 cut(s) 786, 1593
MfeI CAATTG 1 cut(s) 1688
MflI RGATCY 1 cut(s) 1593
MhlI GDGCHC 2 cut(s) 175, 1497
MlyI GAGTC 3 cut(s) 488, 628, 1877
MmeI TCCRAC 4 cut(s) 64, 114, 436, 2028
Mph1103I ATGCAT 1 cut(s) 493
MroXI GAANNNNTTC 1 cut(s) 1545
MseI TTAA 9 cut(s) 78, 417, 432, 486, 594, 834, 918, 1407, 1736
MslI CAYNNNNRTG 2 cut(s) 1482, 1488
MspI CCGG 5 cut(s) 279, 501, 988, 1497, 1538
MspR9I CCNGG 5 cut(s) 279, 502, 563, 1497, 1538
MunI CAATTG 1 cut(s) 1688
MvaI CCWGG 1 cut(s) 563
MwoI GCNNNNNNNGC 5 cut(s) 497, 620, 702, 1094, 1103
NciI CCSGG 4 cut(s) 279, 502, 1497, 1538
NdeII GATC 2 cut(s) 786, 1593
NlaIII CATG 7 cut(s) 292, 736, 1127, 1240, 1373, 1487, 1678
NlaIV GGNNCC 3 cut(s) 328, 1519, 1536
NmeAIII GCCGAG 2 cut(s) 194, 337
NmuCI GTSAC 2 cut(s) 598, 728
NsiI ATGCAT 1 cut(s) 493
PceI AGGCCT 1 cut(s) 1627
PdmI GAANNNNTTC 1 cut(s) 1545
PfeI GAWTC 2 cut(s) 584, 1382
PflMI CCANNNNNTGG 1 cut(s) 289
PkrI GCNGC 2 cut(s) 1015, 1862
PleI GAGTC 3 cut(s) 487, 628, 1876
PmaCI CACGTG 1 cut(s) 1926
PmlI CACGTG 1 cut(s) 1926
PpsI GAGTC 3 cut(s) 487, 628, 1876
Ppu21I YACGTR 2 cut(s) 1552, 1926
PshBI ATTAAT 1 cut(s) 594
PsiI TTATAA 1 cut(s) 657
Psp124BI GAGCTC 1 cut(s) 175
Psp6I CCWGG 1 cut(s) 561
PspCI CACGTG 1 cut(s) 1926
PspFI CCCAGC 1 cut(s) 614
PspGI CCWGG 1 cut(s) 561
PspN4I GGNNCC 3 cut(s) 328, 1519, 1536
PspPI GGNCC 2 cut(s) 1534, 2025
PsrI GAACNNNNNNTAC 2 cut(s) 200, 232
PsuI RGATCY 1 cut(s) 1593
RsaI GTAC 4 cut(s) 1073, 1364, 1529, 2032
RsaNI GTAC 4 cut(s) 1072, 1363, 1528, 2031
RseI CAYNNNNRTG 2 cut(s) 1482, 1488
SacI GAGCTC 1 cut(s) 175
SalI GTCGAC 1 cut(s) 379
SaqAI TTAA 9 cut(s) 78, 417, 432, 486, 594, 834, 918, 1407, 1736
SatI GCNGC 2 cut(s) 1014, 1861
Sau3AI GATC 2 cut(s) 786, 1593
Sau96I GGNCC 2 cut(s) 1534, 2025
ScaI AGTACT 1 cut(s) 2032
SchI GAGTC 3 cut(s) 488, 628, 1877
ScrFI CCNGG 5 cut(s) 279, 502, 563, 1497, 1538
SduI GDGCHC 2 cut(s) 175, 1497
SfaNI GCATC 3 cut(s) 500, 1464, 1879
SfcI CTRYAG 1 cut(s) 1629
SinI GGWCC 1 cut(s) 2025
SmiMI CAYNNNNRTG 2 cut(s) 1482, 1488
SseBI AGGCCT 1 cut(s) 1627
SsiI CCGC 5 cut(s) 51, 309, 1013, 1106, 1566
SstI GAGCTC 1 cut(s) 175
StuI AGGCCT 1 cut(s) 1627
StyD4I CCNGG 5 cut(s) 277, 500, 561, 1495, 1536
StyI CCWWGG 2 cut(s) 1650, 1917
TaaI ACNGT 3 cut(s) 118, 865, 1522
TaiI ACGT 5 cut(s) 393, 456, 1554, 1581, 1928
TaqI TCGA 7 cut(s) 57, 233, 380, 402, 408, 723, 827
TatI WGTACW 3 cut(s) 1071, 1362, 2030
TauI GCSGC 1 cut(s) 1016
TfiI GAWTC 2 cut(s) 584, 1382
Tru1I TTAA 9 cut(s) 78, 417, 432, 486, 594, 834, 918, 1407, 1736
Tru9I TTAA 9 cut(s) 78, 417, 432, 486, 594, 834, 918, 1407, 1736
TseFI GTSAC 2 cut(s) 598, 728
TseI GCWGC 1 cut(s) 1860
Tsp45I GTSAC 2 cut(s) 598, 728
TspDTI ATGAA 9 cut(s) 17, 52, 204, 286, 696, 950, 1225, 1386, 1454
TspGWI ACGGA 3 cut(s) 339, 627, 1589
Van91I CCANNNNNTGG 1 cut(s) 289
VpaK11BI GGWCC 1 cut(s) 2025
VspI ATTAAT 1 cut(s) 594
XapI RAATTY 3 cut(s) 1116, 1189, 1231
XmiI GTMKAC 1 cut(s) 380
XmnI GAANNNNTTC 1 cut(s) 1545
ZrmI AGTACT 1 cut(s) 2032
Zsp2I ATGCAT 1 cut(s) 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.