Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0015438

Physical Location & Seq

Genomic Coordinates Forward (+)

603785 .. 607986

Gene Structure 4202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1005600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGCGAGAAATGGGTTTGAGAGTGGATGTGTTTCTGCTGGTACTCGCCGTCGTGTGGGCGCCTGTGTTGTCGGATCTGGTCATCTCCAAGGTTGACCGACGCATTGATTTGACATCACAAATTGCGCGGATCACTTCCACGCTGAAGGTGGTGAATGAGGGAAGCAGTTTGGTTTCAGAAGTTTTGTTGGCCTTTCCCGAGAAGCAGGCTAAACTTTTGGCACATCTGACGGCAACCCCCACCGAAGGCAAAGGAAAAGCGAAAGGTTCTAGTATTGGTTACCCAGTTCAAAACGTTCATCCGAAAGACATGCCTCCTGCCTTGACATTTTATTCTGTTGCTTTACCAAAGGGACTGGGCAAGGGGGACAGCTTCACTTTTGATGTATTGGCTGTTTTCACCCATGCATTGAAGCCGTTTCCAGAGAAAGTTACTCAGGCTGACATTCAACTCCTAGTGTTTCAGGAAAGCGCATACTATCTCTCTCCTTATGCGGTCAAGGTGCAAACACTCAGTGTTAAATTACCTGATGCGAGAATTGAGTCTTATACAAAAGTAGAAAATACAAAGAATGTTGGTTCAGAGATCAAATATGGTCCTTACGAGAATCTTTCTCCCCTTTCCTTCTCACCTATAGTTGTTCATTTTGAGAGCAATCAACCTTTTGCTGTTGCTGAAGAGTTGGTGCGAGAGATAGAGATTTCCCATTGGGGTAATATTCAAGTAACAGAGCATTACAAGCTTGTCCATGGAGGTGCTCAAAGCAAGGGAGAATTCTCAAGACTTGATTATCAAGCCAGACCTCATGTCAGAGGTCAATCAGCCATTAGGCGTCTTGTTGCGAAATTGCCACCAAGAGCTCATTCTGTTTACTATAGGGATGAAATAGGCAATGTTTCAACATCCAACTTATGGAGTGATTCTAAGAAGACAGAACTGGAAATCGAACCTAGATACCCCATGTTTGGTGGTTGGAGAACTGCTTTTACCATCGGATATGGCTTGCCGCTTCATGAATATCTGTTTGAATCAGATGGAAAACGTGTCCTTAATATTAGTTTTGGTTGCCCCGTGAATGAGGTGGTCATTGACACCCTCATTGTGAAGGTTGTTCTACCTGAGGGCTCTAGAGATATATCTGTATCTGCTCCATTTCCTCTGAAACAAGGGCGAGAGACAAAATTTTCCCACTTGGATCTTGTTGGGAGACCAGTGGTTGTACTCGAAAAGACTAATGCTGTGCCTGAGCATAATCAGAAATTCCAGGTGTATTACAAATTCAACAGCCTCGCAATGCTTACTGAACCCTTGATGTTGATTTCTGGATTTTTCTTTCTTTTCATTGCTGGCATTGTATACATGCATGTGGACATGTCAATCTCCAAGTCTTCTCCGGCTTATTTGGCCAAACTGCAGTGGGATGAAGTGCAAGCAGCAATTCAGAAGATCCAAAATATCATCAACCGATGCCTCCTTATACATGATAAGCTGGAAGCATCATTACGTGATCTTTCCCGGACAGGGGATGTCCAAGCTTGTAAAGCTGCTCGGAAAGCAGCTGATGGTTCGTTGAAAGAGCTTTCAAAAGAGATGAAGCCCTTGTTGGCATTCTTGCAATCTTCTCACCAGGCTGCACAGATACTACCCAAGGTGGAGGAGCTAGTTGTGAAGGAGAAAGATTTAGAAGAAAGGTTAATGGTGAAACACTCTACAGTTGTGGATTGCTATGAGAAGAAGTATGGCGGAAGGGAAATCGAGAGCCGGGTTGCTTCACATCTGCAGAAAATTGCCGCCTTGAGGCAGGAGGTTGACGATCTTCTGGATTTTATTGACGAGATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004576 GO:0004579 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0008150 GO:0008152 GO:0008250 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016020 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0070085 GO:0071704 GO:0098796 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 map00510 map00513 map01100 map04141

Pfam Domains

Protein Families

Ribophorin_I

Protein Analysis

614

Amino Acids

68.66

Weight (kDa)

7.7

Isoelectric Point (pI)

43.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribophorin_I	PF04597	27 - 453	9.6e-148	Ribophorin I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76400 AT1G76400
fragaria_vesca	FvH4_5g25900
malus_domestica	MD06G1005600.v1.1
prunus_persica	Prupe.5G006900_v2.0.a1
pyrus_communis	pycom06g00520
rosa_chinensis	RchiOBHm_Chr6g0264761 RchiOBHm_Chr7g0216411
rosa_laevigata	RLG00000002573
rosa_multiflora	Rmu_sc0000692.1_g000009
rosa_roxburghii	Rroxscaffold_3G00243260
rosa_rugosa	Rorug07G0160300 Rorug07G0160300
rosa_samantha	Rh7AG299200 Rh7DG300500
rosa_wichuraiana	Rw7G025430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	58
AccB7I	CCANNNNNTGG	1 cut(s)	912
AccI	GTMKAC	1 cut(s)	1356
AccII	CGCG	1 cut(s)	127
AciI	CCGC	5 cut(s)	127, 494, 1007, 1743, 1791
AclI	AACGTT	1 cut(s)	294
AclWI	GGATC	4 cut(s)	81, 137, 1203, 1441
AcoI	YGGCCR	1 cut(s)	1404
AcsI	RAATTY	4 cut(s)	773, 1181, 1259, 1277
AcuI	CTGAAG	2 cut(s)	164, 696
AcyI	GRCGYC	2 cut(s)	59, 832
AdeI	CACNNNGTG	1 cut(s)	515
AfaI	GTAC	2 cut(s)	42, 1221
AfiI	CCNNNNNNNGG	7 cut(s)	54, 245, 912, 965, 1521, 1522, 1797
AflIII	ACRYGT	2 cut(s)	1042, 1371
AgsI	TTSAA	9 cut(s)	290, 412, 449, 722, 900, 1028, 1282, 1573, 1584
AhdI	GACNNNNNGTC	1 cut(s)	806
AjnI	CCWGG	2 cut(s)	1263, 1626
AjuI	GAANNNNNNNTTGG	4 cut(s)	847, 879, 1586, 1618
AluBI	AGCT	9 cut(s)	372, 742, 860, 1489, 1535, 1544, 1559, 1579, 1660
AluI	AGCT	9 cut(s)	372, 742, 860, 1489, 1535, 1544, 1559, 1579, 1660
Alw21I	GWGCWC	2 cut(s)	760, 862
Alw26I	GTCTC	2 cut(s)	1169, 1201
AlwI	GGATC	4 cut(s)	81, 137, 1203, 1441
Ama87I	CYCGRG	1 cut(s)	197
AoxI	GGCC	2 cut(s)	189, 1404
ApeKI	GCWGC	4 cut(s)	1433, 1544, 1556, 1631
ApoI	RAATTY	4 cut(s)	773, 1181, 1259, 1277
AspLEI	GCGC	3 cut(s)	61, 127, 473
AspS9I	GGNCC	1 cut(s)	596
AsuC2I	CCSGG	2 cut(s)	1516, 1763
AsuHPI	GGTGA	5 cut(s)	163, 391, 621, 1616, 1711
AvaI	CYCGRG	1 cut(s)	197
AvaII	GGWCC	1 cut(s)	596
AxyI	CCTNAGG	1 cut(s)	1119
BalI	TGGCCA	1 cut(s)	1406
BanI	GGYRCC	1 cut(s)	58
BanII	GRGCYC	2 cut(s)	862, 1127
BarI	GAAGNNNNNNTAC	2 cut(s)	1485, 1517
BbsI	GAAGAC	2 cut(s)	935, 1380
Bbv12I	GWGCWC	2 cut(s)	760, 862
BbvI	GCAGC	4 cut(s)	1445, 1531, 1568, 1618
BccI	CCATC	3 cut(s)	998, 1028, 1556
BceAI	ACGGC	3 cut(s)	32, 246, 400
BcgI	CGANNNNNNTGC	2 cut(s)	292, 326
BciT130I	CCWGG	2 cut(s)	1265, 1628
BcnI	CCSGG	2 cut(s)	1516, 1763
BcoDI	GTCTC	2 cut(s)	1169, 1201
BfaI	CTAG	5 cut(s)	270, 455, 951, 1128, 1661
BfmI	CTRYAG	5 cut(s)	633, 874, 1412, 1710, 1778
BfoI	RGCGCY	1 cut(s)	62
BisI	GCNGC	6 cut(s)	1007, 1434, 1545, 1557, 1632, 1791
BlsI	GCNGC	6 cut(s)	1008, 1435, 1546, 1558, 1633, 1792
Bme1390I	CCNGG	4 cut(s)	1265, 1516, 1628, 1763
Bme18I	GGWCC	1 cut(s)	596
BmeRI	GACNNNNNGTC	1 cut(s)	806
BmeT110I	CYCGRG	1 cut(s)	197
BmgT120I	GGNCC	1 cut(s)	596
BmiI	GGNNCC	1 cut(s)	60
BmrFI	CCNGG	4 cut(s)	1265, 1516, 1628, 1763
BmrI	ACTGGG	2 cut(s)	278, 365
BmsI	GCATC	3 cut(s)	520, 1457, 1505
BmuI	ACTGGG	2 cut(s)	278, 365
BpiI	GAAGAC	2 cut(s)	935, 1380
Bpu10I	CCTNAGC	1 cut(s)	1245
BpuEI	CTTGAG	2 cut(s)	763, 1816
BpuMI	CCSGG	2 cut(s)	1516, 1763
BsaAI	YACGTR	1 cut(s)	1505
BsaHI	GRCGYC	2 cut(s)	59, 832
BsaI	GGTCTC	1 cut(s)	1201
BsaJI	CCNNGG	3 cut(s)	87, 748, 1647
Bsc4I	CCNNNNNNNGG	7 cut(s)	54, 245, 912, 965, 1521, 1522, 1797
Bse1I	ACTGG	4 cut(s)	284, 360, 942, 1211
Bse21I	CCTNAGG	1 cut(s)	1119
Bse3DI	GCAATG	3 cut(s)	898, 1299, 1341
BseBI	CCWGG	2 cut(s)	1265, 1628
BseDI	CCNNGG	3 cut(s)	87, 748, 1647
BseGI	GGATG	6 cut(s)	31, 298, 886, 902, 1426, 1531
BseLI	CCNNNNNNNGG	7 cut(s)	54, 245, 912, 965, 1521, 1522, 1797
BseMI	GCAATG	3 cut(s)	898, 1299, 1341
BseMII	CTCAG	4 cut(s)	449, 526, 1110, 1236
BseNI	ACTGG	4 cut(s)	284, 360, 942, 1211
BseRI	GAGGAG	1 cut(s)	1670
BseXI	GCAGC	4 cut(s)	1445, 1531, 1568, 1618
BsgI	GTGCAG	1 cut(s)	1617
Bsh1236I	CGCG	1 cut(s)	127
BshFI	GGCC	2 cut(s)	191, 1406
BshNI	GGYRCC	1 cut(s)	58
BsiHKAI	GWGCWC	2 cut(s)	760, 862
BsiHKCI	CYCGRG	1 cut(s)	197
BsiSI	CCGG	3 cut(s)	1394, 1516, 1762
BslFI	GGGAC	2 cut(s)	366, 380
BslI	CCNNNNNNNGG	7 cut(s)	54, 245, 912, 965, 1521, 1522, 1797
BsmAI	GTCTC	2 cut(s)	1169, 1201
BsmFI	GGGAC	2 cut(s)	366, 380
BsmI	GAATGC	1 cut(s)	1607
BsnI	GGCC	2 cut(s)	191, 1406
Bso31I	GGTCTC	1 cut(s)	1201
BsoBI	CYCGRG	1 cut(s)	197
Bsp1286I	GDGCHC	3 cut(s)	760, 862, 1127
Bsp143I	GATC	7 cut(s)	73, 129, 585, 1195, 1446, 1507, 1813
Bsp19I	CCATGG	1 cut(s)	748
BspACI	CCGC	5 cut(s)	127, 494, 1007, 1743, 1791
BspANI	GGCC	2 cut(s)	191, 1406
BspCNI	CTCAG	4 cut(s)	448, 525, 1111, 1237
BspFNI	CGCG	1 cut(s)	127
BspHI	TCATGA	1 cut(s)	1012
BspLI	GGNNCC	1 cut(s)	60
BspMAI	CTGCAG	2 cut(s)	1416, 1782
BspPI	GGATC	4 cut(s)	81, 137, 1203, 1441
BspT107I	GGYRCC	1 cut(s)	58
BspTNI	GGTCTC	1 cut(s)	1201
BsrDI	GCAATG	3 cut(s)	898, 1299, 1341
BsrI	ACTGG	4 cut(s)	284, 360, 942, 1211
BssECI	CCNNGG	3 cut(s)	87, 748, 1647
BssMI	GATC	7 cut(s)	73, 129, 585, 1195, 1446, 1507, 1813
BssNAI	GTATAC	1 cut(s)	1357
BssNI	GRCGYC	2 cut(s)	59, 832
BssT1I	CCWWGG	3 cut(s)	87, 748, 1647
Bst1107I	GTATAC	1 cut(s)	1357
Bst2UI	CCWGG	2 cut(s)	1265, 1628
Bst4CI	ACNGT	1 cut(s)	1714
Bst6I	CTCTTC	1 cut(s)	672
BstACI	GRCGYC	2 cut(s)	59, 832
BstBAI	YACGTR	1 cut(s)	1505
BstC8I	GCNNGC	4 cut(s)	207, 1004, 1348, 1431
BstDEI	CTNAG	5 cut(s)	435, 512, 924, 1119, 1245
BstDSI	CCRYGG	1 cut(s)	748
BstEII	GGTNACC	1 cut(s)	278
BstF5I	GGATG	6 cut(s)	31, 298, 886, 902, 1426, 1531
BstFNI	CGCG	1 cut(s)	127
BstH2I	RGCGCY	1 cut(s)	62
BstHHI	GCGC	3 cut(s)	61, 127, 473
BstKTI	GATC	7 cut(s)	76, 132, 588, 1198, 1449, 1510, 1816
BstMAI	GTCTC	2 cut(s)	1169, 1201
BstMBI	GATC	7 cut(s)	73, 129, 585, 1195, 1446, 1507, 1813
BstMWI	GCNNNNNNNGC	4 cut(s)	739, 1403, 1541, 1553
BstNI	CCWGG	2 cut(s)	1265, 1628
BstNSI	RCATGY	4 cut(s)	313, 1363, 1367, 1375
BstPI	GGTNACC	1 cut(s)	278
BstSCI	CCNGG	4 cut(s)	1263, 1514, 1626, 1761
BstSFI	CTRYAG	5 cut(s)	633, 874, 1412, 1710, 1778
BstUI	CGCG	1 cut(s)	127
BstV1I	GCAGC	4 cut(s)	1445, 1531, 1568, 1618
BstV2I	GAAGAC	2 cut(s)	935, 1380
BstX2I	RGATCY	3 cut(s)	73, 1195, 1446
BstYI	RGATCY	3 cut(s)	73, 1195, 1446
BstZ17I	GTATAC	1 cut(s)	1357
Bsu36I	CCTNAGG	1 cut(s)	1119
BsuRI	GGCC	2 cut(s)	191, 1406
BtgI	CCRYGG	1 cut(s)	748
BtsCI	GGATG	6 cut(s)	31, 298, 886, 902, 1426, 1531
BtsI	GCAGTG	1 cut(s)	1421
BtsIMutI	CAGTG	3 cut(s)	520, 1218, 1421
Cac8I	GCNNGC	4 cut(s)	207, 1004, 1348, 1431
CciI	TCATGA	1 cut(s)	1012
CfoI	GCGC	3 cut(s)	61, 127, 473
Cfr13I	GGNCC	1 cut(s)	596
CseI	GACGC	2 cut(s)	108, 821
Csp6I	GTAC	2 cut(s)	41, 1220
CviQI	GTAC	2 cut(s)	41, 1220
DdeI	CTNAG	5 cut(s)	435, 512, 924, 1119, 1245
DinI	GGCGCC	1 cut(s)	60
DpnI	GATC	7 cut(s)	75, 131, 587, 1197, 1448, 1509, 1815
DpnII	GATC	7 cut(s)	73, 129, 585, 1195, 1446, 1507, 1813
DraIII	CACNNNGTG	1 cut(s)	515
DriI	GACNNNNNGTC	1 cut(s)	806
EaeI	YGGCCR	1 cut(s)	1404
Eam1104I	CTCTTC	1 cut(s)	672
Eam1105I	GACNNNNNGTC	1 cut(s)	806
EarI	CTCTTC	1 cut(s)	672
EciI	GGCGGA	1 cut(s)	1758
Ecl136II	GAGCTC	1 cut(s)	860
Eco130I	CCWWGG	3 cut(s)	87, 748, 1647
Eco24I	GRGCYC	2 cut(s)	862, 1127
Eco31I	GGTCTC	1 cut(s)	1201
Eco47I	GGWCC	1 cut(s)	596
Eco53kI	GAGCTC	1 cut(s)	860
Eco57I	CTGAAG	2 cut(s)	164, 696
Eco81I	CCTNAGG	1 cut(s)	1119
Eco88I	CYCGRG	1 cut(s)	197
Eco91I	GGTNACC	1 cut(s)	278
EcoICRI	GAGCTC	1 cut(s)	860
EcoO65I	GGTNACC	1 cut(s)	278
EcoRI	GAATTC	1 cut(s)	773
EcoRII	CCWGG	2 cut(s)	1263, 1626
EcoT14I	CCWWGG	3 cut(s)	87, 748, 1647
EcoT22I	ATGCAT	2 cut(s)	409, 1365
EcoT38I	GRGCYC	2 cut(s)	862, 1127
EgeI	GGCGCC	1 cut(s)	60
EheI	GGCGCC	1 cut(s)	60
ErhI	CCWWGG	3 cut(s)	87, 748, 1647
FaqI	GGGAC	2 cut(s)	366, 380
FblI	GTMKAC	1 cut(s)	1356
Fnu4HI	GCNGC	6 cut(s)	1007, 1434, 1545, 1557, 1632, 1791
FokI	GGATG	6 cut(s)	38, 285, 889, 893, 1433, 1538
FriOI	GRGCYC	2 cut(s)	862, 1127
Fsp4HI	GCNGC	6 cut(s)	1007, 1434, 1545, 1557, 1632, 1791
FspBI	CTAG	5 cut(s)	270, 455, 951, 1128, 1661
GlaI	GCGC	3 cut(s)	60, 126, 472
GluI	GCNGC	6 cut(s)	1007, 1434, 1545, 1557, 1632, 1791
HaeII	RGCGCY	1 cut(s)	62
HaeIII	GGCC	2 cut(s)	191, 1406
HapII	CCGG	3 cut(s)	1394, 1516, 1762
HgaI	GACGC	2 cut(s)	108, 821
HhaI	GCGC	3 cut(s)	61, 127, 473
Hin1I	GRCGYC	2 cut(s)	59, 832
Hin6I	GCGC	3 cut(s)	59, 125, 471
HinP1I	GCGC	3 cut(s)	59, 125, 471
HincII	GTYRAC	2 cut(s)	94, 1810
HindII	GTYRAC	2 cut(s)	94, 1810
HindIII	AAGCTT	2 cut(s)	740, 1533
HinfI	GANTC	4 cut(s)	542, 607, 920, 1028
HpaII	CCGG	3 cut(s)	1394, 1516, 1762
HphI	GGTGA	5 cut(s)	163, 391, 621, 1616, 1711
Hpy166II	GTNNAC	5 cut(s)	94, 871, 1357, 1369, 1810
Hpy188III	TCNNGA	9 cut(s)	197, 422, 464, 780, 1013, 1128, 1323, 1756, 1820
Hpy8I	GTNNAC	5 cut(s)	94, 871, 1357, 1369, 1810
Hpy99I	CGWCG	2 cut(s)	53, 102
HpyAV	CCTTC	6 cut(s)	139, 239, 634, 1099, 1663, 1740
HpyCH4III	ACNGT	1 cut(s)	1714
HpyCH4IV	ACGT	3 cut(s)	294, 1042, 1504
HpyCH4V	TGCA	8 cut(s)	407, 505, 1363, 1414, 1429, 1615, 1634, 1780
HpyF10VI	GCNNNNNNNGC	4 cut(s)	739, 1403, 1541, 1553
HpyF3I	CTNAG	5 cut(s)	435, 512, 924, 1119, 1245
HpySE526I	ACGT	3 cut(s)	294, 1042, 1504
Hsp92I	GRCGYC	2 cut(s)	59, 832
HspAI	GCGC	3 cut(s)	59, 125, 471
KasI	GGCGCC	1 cut(s)	58
Kzo9I	GATC	7 cut(s)	73, 129, 585, 1195, 1446, 1507, 1813
LmnI	GCTCC	2 cut(s)	1153, 1657
Lsp1109I	GCAGC	4 cut(s)	1445, 1531, 1568, 1618
LweI	GCATC	3 cut(s)	520, 1457, 1505
MaeI	CTAG	5 cut(s)	270, 455, 951, 1128, 1661
MaeII	ACGT	3 cut(s)	294, 1042, 1504
MaeIII	GTNAC	3 cut(s)	278, 430, 724
MalI	GATC	7 cut(s)	75, 131, 587, 1197, 1448, 1509, 1815
MboI	GATC	7 cut(s)	73, 129, 585, 1195, 1446, 1507, 1813
MboII	GAAGA	8 cut(s)	689, 940, 1380, 1456, 1611, 1697, 1744, 1808
MflI	RGATCY	3 cut(s)	73, 1195, 1446
MhlI	GDGCHC	3 cut(s)	760, 862, 1127
MlsI	TGGCCA	1 cut(s)	1406
MluNI	TGGCCA	1 cut(s)	1406
Mly113I	GGCGCC	1 cut(s)	59
MlyI	GAGTC	1 cut(s)	551
MmeI	TCCRAC	3 cut(s)	51, 930, 953
Mox20I	TGGCCA	1 cut(s)	1406
Mph1103I	ATGCAT	2 cut(s)	409, 1365
MscI	TGGCCA	1 cut(s)	1406
MseI	TTAA	3 cut(s)	519, 1050, 1694
MslI	CAYNNNNRTG	2 cut(s)	753, 1364
Msp20I	TGGCCA	1 cut(s)	1406
MspA1I	CMGCKG	1 cut(s)	1559
MspI	CCGG	3 cut(s)	1394, 1516, 1762
MspR9I	CCNGG	4 cut(s)	1265, 1516, 1628, 1763
Mva1269I	GAATGC	1 cut(s)	1607
MvaI	CCWGG	2 cut(s)	1265, 1628
MvnI	CGCG	1 cut(s)	127
MwoI	GCNNNNNNNGC	4 cut(s)	739, 1403, 1541, 1553
NarI	GGCGCC	1 cut(s)	59
NciI	CCSGG	2 cut(s)	1516, 1763
NcoI	CCATGG	1 cut(s)	748
NdeII	GATC	7 cut(s)	73, 129, 585, 1195, 1446, 1507, 1813
NlaIV	GGNNCC	1 cut(s)	60
NsiI	ATGCAT	2 cut(s)	409, 1365
NspI	RCATGY	4 cut(s)	313, 1363, 1367, 1375
PagI	TCATGA	1 cut(s)	1012
PciI	ACATGT	1 cut(s)	1371
PctI	GAATGC	1 cut(s)	1607
PfeI	GAWTC	3 cut(s)	607, 920, 1028
PflMI	CCANNNNNTGG	1 cut(s)	912
PfoI	TCCNGGA	1 cut(s)	1514
PkrI	GCNGC	6 cut(s)	1008, 1435, 1546, 1558, 1633, 1792
PleI	GAGTC	1 cut(s)	550
PluTI	GGCGCC	1 cut(s)	62
PpsI	GAGTC	1 cut(s)	550
Ppu21I	YACGTR	1 cut(s)	1505
PscI	ACATGT	1 cut(s)	1371
Psp124BI	GAGCTC	1 cut(s)	862
Psp1406I	AACGTT	1 cut(s)	294
Psp6I	CCWGG	2 cut(s)	1263, 1626
PspEI	GGTNACC	1 cut(s)	278
PspGI	CCWGG	2 cut(s)	1263, 1626
PspN4I	GGNNCC	1 cut(s)	60
PspPI	GGNCC	1 cut(s)	596
PsrI	GAACNNNNNNTAC	2 cut(s)	970, 1002
PstI	CTGCAG	2 cut(s)	1416, 1782
PsuI	RGATCY	3 cut(s)	73, 1195, 1446
PvuII	CAGCTG	1 cut(s)	1559
RsaI	GTAC	2 cut(s)	42, 1221
RsaNI	GTAC	2 cut(s)	41, 1220
RseI	CAYNNNNRTG	2 cut(s)	753, 1364
SacI	GAGCTC	1 cut(s)	862
SaqAI	TTAA	3 cut(s)	519, 1050, 1694
SatI	GCNGC	6 cut(s)	1007, 1434, 1545, 1557, 1632, 1791
Sau3AI	GATC	7 cut(s)	73, 129, 585, 1195, 1446, 1507, 1813
Sau96I	GGNCC	1 cut(s)	596
SchI	GAGTC	1 cut(s)	551
ScrFI	CCNGG	4 cut(s)	1265, 1516, 1628, 1763
SduI	GDGCHC	3 cut(s)	760, 862, 1127
SfaNI	GCATC	3 cut(s)	520, 1457, 1505
SfcI	CTRYAG	5 cut(s)	633, 874, 1412, 1710, 1778
SfoI	GGCGCC	1 cut(s)	60
SinI	GGWCC	1 cut(s)	596
SmiMI	CAYNNNNRTG	2 cut(s)	753, 1364
SmlI	CTYRAG	2 cut(s)	778, 1795
SmoI	CTYRAG	2 cut(s)	778, 1795
SsiI	CCGC	5 cut(s)	127, 494, 1007, 1743, 1791
SspDI	GGCGCC	1 cut(s)	58
SspI	AATATT	2 cut(s)	718, 1054
SspMI	CTAG	5 cut(s)	270, 455, 951, 1128, 1661
SstI	GAGCTC	1 cut(s)	862
StyD4I	CCNGG	4 cut(s)	1263, 1514, 1626, 1761
StyI	CCWWGG	3 cut(s)	87, 748, 1647
TaaI	ACNGT	1 cut(s)	1714
TaiI	ACGT	3 cut(s)	297, 1045, 1507
TaqI	TCGA	3 cut(s)	945, 1224, 1755
TaqII	GACCGA	1 cut(s)	111
TatI	WGTACW	1 cut(s)	1219
TauI	GCSGC	2 cut(s)	1009, 1793
TfiI	GAWTC	3 cut(s)	607, 920, 1028
Tru1I	TTAA	3 cut(s)	519, 1050, 1694
Tru9I	TTAA	3 cut(s)	519, 1050, 1694
TscAI	CASTG	3 cut(s)	520, 1218, 1421
TseI	GCWGC	4 cut(s)	1433, 1544, 1556, 1631
TspDTI	ATGAA	8 cut(s)	287, 632, 897, 1001, 1029, 1330, 1437, 1607
TspRI	CASTG	3 cut(s)	520, 1218, 1421
Van91I	CCANNNNNTGG	1 cut(s)	912
VpaK11BI	GGWCC	1 cut(s)	596
XapI	RAATTY	4 cut(s)	773, 1181, 1259, 1277
XbaI	TCTAGA	1 cut(s)	1127
XceI	RCATGY	4 cut(s)	313, 1363, 1367, 1375
XcmI	CCANNNNNNNNNTGG	1 cut(s)	145
XmiI	GTMKAC	1 cut(s)	1356
XspI	CTAG	5 cut(s)	270, 455, 951, 1128, 1661
Zsp2I	ATGCAT	2 cut(s)	409, 1365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.