MD07G1063600.v1.1

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0018899
Physical Location & Seq
Reverse (-)
5960177 .. 5969562
9386 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1063600.v1.1.491

Sequence Viewer

Length: 3972 bp
ATGGCGGGAGGTGCGAGATTTGAGATGAGTGCAGCCAGTCCAGAGGACTCGGCATTTGCAGGGGGATATTCAAATGGGATGAGAGGAAATTACCCTGGTGCCAGTTTGGATAGGTCTGGAAGCTTCCGTGAGGGTGGTGAGAGTCGGATGCTTAGTTCTGGTGCTACTACGCCCAGGGACAATGCTACTTCGAGAGGAAATTTGCCTCCACTACATCAGTGTTTGATGTTAGATCCTATTACAATGGGAGATCAGCAGTTTGCTTCCTTGGGTGAGCTAAGGAGGGTTCTGGGAATACCTTTTGGCGGCAGTTTAGAAGACAATCCATTTGGAGCAGCTAATTTGAAGCCCCACACTCCAGTGGCTACAGAGGACCTAAAATGGTTCAAAGACAGTGTGCTAGTGGCCTCAAACAAGGCCAGGGTTAGAGCAAAAAGGTTGGATGACTCCATCGACAAATTGAACAGGTATTGTGAAGCTTTAAACTTAAAGAAGCAGCAAAGGAATGAGTTTATAACAAATGAAAGATCAGGTGGGTCAAACTTGCTGAAGATGGGAGCTTCGAGAAACTCTTCAGATTCTATGAATCAAAGGCTGGAGGACAGGACTAAGACTGTTGTGATGAACAGGCGTGCTCGCTCATCGGTCACAGAATTAAGGGCTGAAAGCAGAAGTAATGTGCTGACAAGGCAGCCTGTGGTTGTGGGAAAAGATAGGGATATGCTTAGAGGTGAAGGCTCTGATCTTGTTGAAGAAAAGATTCGCAGACTACCTGCTGGAGGGGAAGCATGGGATAAAAAAATGAAAAGGAAACGTTCTGTAGGCACAGTATATAGCAGGCCCATGGATGGTGATGCAGAGCTAAAACGAACCTTACATCATAAGCCTAATGATGAGCCTTGTCCCCAAGCCTGTGATGCCCAAAGTTTCAGATCAGGGTCATTTACTGGTGGTAATGGCATTAACAAGCTAGACTCTAATTCCTTGTCTGCTAATGCAAATGGTCGTATTATGCTCAAGAATGAGTTGGACAAGGTCTCTCTTTCAAAAGATTTAACGTTTGGGTTGACTAAGGAGCGACTTTTACCAAAGGCAAACAATAAGTTAAATGTTCGCGATGATAGTCAAATACTCAATCCTAATCCAGTGATAAAGGGAAAGGCTTCAAGGGCGCCAAGAAATGGCCCTGTAACTGCATGCAACTCATCTCCTAGTCTTCCTCGCACATCTGGAACACCTGAGGGATGGGAACAACCTCCAAGTGTAACAAAAAATAATTCAGTGAGCGGGGCTACCAATCGCAAACGTCCGGTGCCCACAGGATCAACCACGCCCTCGATGGCTCAATGGGTTGGTCAGAGACCACAGAAAATGTCTCGAACCAGAAGATCAAATCTACTGTCTCCTGTGTCAAACCATGATGAAGTGCAGATACCCTCAGAAAGATGTTCCCCTTCTGATGCGGGTGGTAGATTAAATTCTTTTGGGACCAATGGGCTGCTTCAGAAGAGTGTTGTGAATGGTGCCCAACAAATTAAAATTAAACAGGAAATGGTTTCATCTCCTGTCAGATTATCTGAAAGTGAAGAATCTGGTGCTGGTGAAAATCGTGAAAGTAGATTGAAAGAGAAAGGACCAGGTAGTAGTGAAGTAGGTGAGAAAGCTGTGAATGATGTTCAGAATACTGGTTCTTCAATATTACCTACAAAGAAGAATAAACTGCTCAATAGAGAGGAAACTGGAGCTGGTGTTCGGAGACAGGGAAGGAGTGGAAGAGGATCATCAGTTTGTAGGGCTACCACTGTAGCTACAAGGGAAAACTTGGAAACTCCAGCCTTGGCAAAGCCATTCAAAAGTATGAGGCCTGGTTCTGAGAAGAATGGAAGTAAATCAGGGCGTCCTCCTCTGAAGAAACTGTCAGATAGGAAGGCCTTTACTTTTCCAGGCCATATATCTACCATCGGTTCCCCTGATTGTGCAGGTGAGCCAGATGATGACCATGAAGAACTTCTGGAAGCTGCAAATTTTGCCTGTAGCTCCAACAATTTGGCCTGTTCTAGTTCATTTTGGAAGAAAATGGAACCAATATTTGGTCCTGTCAGTTTAGAGGTGGTATCCTACTTCCAGGAGCAGCTCATATCTGTGGAGGAGAATGATGAATGCATGTCTCTGATGCTAGGCAATACCAATAATGTTTCGGGTGATATTGTGCACGAAGAAAACTTTGTGCCCAAGACTCTTGTTTCTGGACAATACGAGTGGAACGTGCAAGACCAAATTCAAAAAGGAGATATATCTTGTGGAAGATTAGTCTCAAAAGGAACAAAGAAAGTGCCTCCACTGTACCAAAGAGTATTATCGGCTCTAATCGTGGAAGATGACATTAAAGAATTTGAAAATGGCAATGACTGGAGAACTATGTCTTTACAATATAATGGGGACAATTTTCCAGGTGCTACATGTGCCTCTATTAATGTTGAGCCAAGGAACAGGATCGGGGTCCAGCTTCCAAACGATACAGATATGGGTTTGCAGACTCTCAATCAATGTTCCATTGACAATTACCCTTACAATGGGGCCAGTGGCTTTGTGAATGCCACAGGCATCTGTAATCAATTATACAATAATGATTTGTCAAAAGTAGATTTTGGAGAGTTGCATTCAGAGAGTGGGATGCTTCCCTTGTTTTCCGAAAATGGTGCAGATGGGTTACTACATGTGGTTACAAACTCTCCAGGAATTTCTTCCTCTGATTGCCCATATGAACAGATGCCTCTGGAGGATAGACTCTTGTTGGAGCTACAAAGTGTAGGCCTGTATCAAGAAACAGTGCCTGATCTAGCAGATGGAGTGGACGAAGCAATTGATAAAGATATTGTTGGACTACAGAAGCTACTTCACCAACAGGTTGATGGGAAGAAGATACAGTTAAACAAATTTGTTAAAGCAATTGAAGAAGGCATGGACATCGAAAGACGGCGCCGCGAGCAGGTTGCTATGGACAAGCTTGTTGAGTTGGCTTTCAGAAAGCTTCTGGCCACTCGGGGAAGTATTGCTTCAAAATATCGGATTGCTAAGGTTTCAAAACAAGTTGCCATTGCTTTTATGAAGAGGACTCTTGCTAGATGTCGAAAATATGAAGAAACTGGAAAAAGTTGCTTTAATGAGCCTGTACTTCGAGATGTCATTTTCGCTGCATCGCTTCCCAGTAGCAATGGAGAAACCATGAAATGCAACAGCATAAGTTCGCCACTTGAAAATCAAAACTCTCAACAAGAACCTGGGGTTTCAGGTTCTTCCAAATGGGCAGAGCGGCCTGATCATCGTAATAAGCATGACTGGGGTTCTTCTGGTATGTCCAGTCTTACCCATCCCACTGAGCAGGTTACAAAAACTGGACCAATATTGTACAGAGGGAAAAAGAAGGAAGTTCTGCTTGATGATGTTGGCAGCCCCTCCTTGAAAGCTGCATCAAATCTTGGTACTGTGTTGGGTCGAGCAAAAGGAAAAAGAAGTGAGAGAGAAAGGGACAAAGATACATCAGCCAGGAATTCTGTTACCAAAGCTGACCGTCAATCATTGGGTAACAATAAGGGTGAGCGTAAAACCAAAACAAAGCCCAAACAGAAGACAGCTCAGCTATCAACTTCAGGAAATCGGTTGATTAGCAATGCCCCTTCAGCTGGATTTGTTGAAGTTGTTGGCAATAATAATAACAGTAAACGAGAGATTGAGCCCACATGCTATAATGACATTCCTCAGGGTCCTACAGAGACCAAGAAACAAATGGATTTTGCAAACTTGCATCTGAATGATTTAGACTCGATAGAACTAGGAGTAGCCAATGACCTTGGTGGCAACCAAGATCTGAGTACTTGGTTTAACTTTGATGAGGATGGTTTGCAGGACCATGATGCAGAGGGGCTTGACATTCCTATGGATGACCTCTCGGATTTGAATATGCTTCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ada3

Protein Analysis

1324

Amino Acids

144.67

Weight (kDa)

8.61

Isoelectric Point (pI)

45.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 515
AarI CACCTGC 1 cut(s) 1970
Acc36I ACCTGC 4 cut(s) 781, 1970, 2980, 3373
AccB1I GGYRCC 5 cut(s) 98, 1171, 1312, 1523, 2979
AccB7I CCANNNNNTGG 2 cut(s) 1181, 2090
AccBSI CCGCTC 2 cut(s) 1287, 3313
AccII CGCG 2 cut(s) 1116, 2985
AciI CCGC 6 cut(s) 5, 306, 1287, 1463, 2983, 3313
AclI AACGTT 2 cut(s) 814, 1058
AclWI GGATC 4 cut(s) 227, 1330, 1786, 2501
AcoI YGGCCR 1 cut(s) 3036
AcsI RAATTY 8 cut(s) 199, 1477, 2023, 2277, 2390, 2739, 2936, 3550
AcuI CTGAAG 6 cut(s) 558, 569, 1487, 1928, 3633, 3663
AcyI GRCGYC 3 cut(s) 1172, 1897, 2980
AfaI GTAC 5 cut(s) 2345, 3174, 3410, 3484, 3874
AfiI CCNNNNNNNGG 8 cut(s) 305, 779, 848, 1181, 2090, 2573, 2989, 3683
AflIII ACRYGT 2 cut(s) 2459, 2716
AjuI GAANNNNNNNTTGG 2 cut(s) 2073, 2105
AleI CACNNNNGTG 1 cut(s) 359
AloI GAACNNNNNNTCC 4 cut(s) 139, 171, 1734, 1766
Alw21I GWGCWC 2 cut(s) 637, 2214
Alw26I GTCTC 8 cut(s) 1042, 1354, 1380, 1407, 1750, 2172, 2317, 3767
Alw44I GTGCAC 1 cut(s) 2210
AlwI GGATC 4 cut(s) 227, 1330, 1786, 2501
AlwNI CAGNNNCTG 1 cut(s) 2834
Ama87I CYCGRG 1 cut(s) 3042
ApaLI GTGCAC 1 cut(s) 2210
ApoI RAATTY 8 cut(s) 199, 1477, 2023, 2277, 2390, 2739, 2936, 3550
ArsI GACNNNNNNTTYG 6 cut(s) 38, 70, 311, 343, 1385, 1417
AseI ATTAAT 1 cut(s) 2472
Asp700I GAANNNNTTC 5 cut(s) 571, 759, 1162, 2007, 2743
AspLEI GCGC 2 cut(s) 1174, 2982
AvaI CYCGRG 1 cut(s) 3042
AvaII GGWCC 8 cut(s) 373, 1488, 1634, 2093, 2500, 3398, 3764, 3907
AxyI CCTNAGG 2 cut(s) 1239, 3759
BaeGI GKGCMC 4 cut(s) 1317, 1528, 2214, 2232
BalI TGGCCA 1 cut(s) 3038
BanI GGYRCC 5 cut(s) 98, 1171, 1312, 1523, 2979
BanII GRGCYC 1 cut(s) 3738
BarI GAAGNNNNNNTAC 2 cut(s) 1416, 1448
BbsI GAAGAC 3 cut(s) 324, 1208, 3635
Bbv12I GWGCWC 2 cut(s) 637, 2214
BceAI ACGGC 1 cut(s) 2993
BcgI CGANNNNNNTGC 6 cut(s) 2681, 2715, 2950, 2975, 2984, 3009
BciVI GTATCC 1 cut(s) 2125
BclI TGATCA 1 cut(s) 3319
BcoDI GTCTC 8 cut(s) 1042, 1354, 1380, 1407, 1750, 2172, 2317, 3767
BfaI CTAG 8 cut(s) 401, 971, 1212, 2058, 2177, 2840, 3123, 3833
BfmI CTRYAG 6 cut(s) 366, 819, 1803, 2032, 2885, 3768
BfoI RGCGCY 2 cut(s) 1175, 2983
BfuAI ACCTGC 4 cut(s) 781, 1970, 2980, 3373
BfuI GTATCC 1 cut(s) 2125
BglII AGATCT 1 cut(s) 3865
BlpI GCTNAGC 1 cut(s) 3636
BmcAI AGTACT 1 cut(s) 3874
Bme18I GGWCC 8 cut(s) 373, 1488, 1634, 2093, 2500, 3398, 3764, 3907
BmeT110I CYCGRG 1 cut(s) 3042
BmrI ACTGGG 2 cut(s) 3201, 3349
BmuI ACTGGG 2 cut(s) 3201, 3349
BpiI GAAGAC 3 cut(s) 324, 1208, 3635
BpmI CTGGAG 8 cut(s) 342, 617, 798, 1761, 1815, 2431, 2718, 2798
Bpu10I CCTNAGC 2 cut(s) 278, 3075
Bpu1102I GCTNAGC 1 cut(s) 3636
BpuEI CTTGAG 1 cut(s) 1001
BsaHI GRCGYC 3 cut(s) 1172, 1897, 2980
BsaI GGTCTC 3 cut(s) 1042, 1354, 3767
BsaWI WCCGGW 1 cut(s) 1309
BsaXI ACNNNNNCTCC 4 cut(s) 1734, 1764, 2716, 2746
Bsc4I CCNNNNNNNGG 8 cut(s) 305, 779, 848, 1181, 2090, 2573, 2989, 3683
Bse21I CCTNAGG 2 cut(s) 1239, 3759
Bse3DI GCAATG 4 cut(s) 2410, 3096, 3220, 3676
BseGI GGATG 9 cut(s) 84, 153, 448, 853, 1250, 2679, 3370, 3901, 3946
BseLI CCNNNNNNNGG 8 cut(s) 305, 779, 848, 1181, 2090, 2573, 2989, 3683
BseMI GCAATG 4 cut(s) 2410, 3096, 3220, 3676
BseMII CTCAG 7 cut(s) 1230, 1452, 1863, 3369, 3650, 3773, 3860
BseRI GAGGAG 2 cut(s) 1893, 2162
BseSI GKGCMC 4 cut(s) 1317, 1528, 2214, 2232
BsgI GTGCAG 4 cut(s) 51, 1448, 1998, 2721
Bsh1236I CGCG 2 cut(s) 1116, 2985
BshNI GGYRCC 5 cut(s) 98, 1171, 1312, 1523, 2979
BsiHKAI GWGCWC 2 cut(s) 637, 2214
BsiHKCI CYCGRG 1 cut(s) 3042
BsiSI CCGG 1 cut(s) 1310
BslFI GGGAC 5 cut(s) 191, 888, 1501, 2453, 3542
BslI CCNNNNNNNGG 8 cut(s) 305, 779, 848, 1181, 2090, 2573, 2989, 3683
BsmAI GTCTC 8 cut(s) 1042, 1354, 1380, 1407, 1750, 2172, 2317, 3767
BsmFI GGGAC 5 cut(s) 191, 888, 1501, 2453, 3542
BsmI GAATGC 3 cut(s) 2165, 2599, 2659
Bso31I GGTCTC 3 cut(s) 1042, 1354, 3767
BsoBI CYCGRG 1 cut(s) 3042
Bsp1286I GDGCHC 6 cut(s) 637, 1317, 1528, 2214, 2232, 3738
Bsp1407I TGTACA 1 cut(s) 3408
Bsp1720I GCTNAGC 1 cut(s) 3636
Bsp19I CCATGG 1 cut(s) 843
Bsp68I TCGCGA 1 cut(s) 1116
BspACI CCGC 6 cut(s) 5, 306, 1287, 1463, 2983, 3313
BspCNI CTCAG 7 cut(s) 1231, 1451, 1864, 3370, 3649, 3772, 3861
BspFNI CGCG 2 cut(s) 1116, 2985
BspMI ACCTGC 4 cut(s) 781, 1970, 2980, 3373
BspPI GGATC 4 cut(s) 227, 1330, 1786, 2501
BspT107I GGYRCC 5 cut(s) 98, 1171, 1312, 1523, 2979
BspTNI GGTCTC 3 cut(s) 1042, 1354, 3767
BsrBI CCGCTC 2 cut(s) 1287, 3313
BsrDI GCAATG 4 cut(s) 2410, 3096, 3220, 3676
BsrGI TGTACA 1 cut(s) 3408
BssNI GRCGYC 3 cut(s) 1172, 1897, 2980
BssT1I CCWWGG 5 cut(s) 267, 843, 1836, 2483, 3850
Bst6I CTCTTC 4 cut(s) 577, 1502, 1768, 3104
BstACI GRCGYC 3 cut(s) 1172, 1897, 2980
BstAPI GCANNNNNTGC 1 cut(s) 2027
BstAUI TGTACA 1 cut(s) 3408
BstC8I GCNNGC 5 cut(s) 633, 637, 839, 1198, 2987
BstDSI CCRYGG 1 cut(s) 843
BstENI CCTNNNNNAGG 1 cut(s) 777
BstF5I GGATG 9 cut(s) 84, 153, 448, 853, 1250, 2679, 3370, 3901, 3946
BstFNI CGCG 2 cut(s) 1116, 2985
BstH2I RGCGCY 2 cut(s) 1175, 2983
BstHHI GCGC 2 cut(s) 1174, 2982
BstMAI GTCTC 8 cut(s) 1042, 1354, 1380, 1407, 1750, 2172, 2317, 3767
BstMWI GCNNNNNNNGC 8 cut(s) 11, 688, 917, 1169, 2027, 2462, 2986, 3680
BstNSI RCATGY 5 cut(s) 1200, 2167, 2463, 2720, 3744
BstSFI CTRYAG 6 cut(s) 366, 819, 1803, 2032, 2885, 3768
BstSLI GKGCMC 4 cut(s) 1317, 1528, 2214, 2232
BstUI CGCG 2 cut(s) 1116, 2985
BstV2I GAAGAC 3 cut(s) 324, 1208, 3635
BstX2I RGATCY 2 cut(s) 232, 3865
BstXI CCANNNNNNTGG 1 cut(s) 2047
BstYI RGATCY 2 cut(s) 232, 3865
Bsu36I CCTNAGG 2 cut(s) 1239, 3759
BsuI GTATCC 1 cut(s) 2125
BtgI CCRYGG 1 cut(s) 843
BtgZI GCGATG 2 cut(s) 1131, 3183
BtsCI GGATG 9 cut(s) 84, 153, 448, 853, 1250, 2679, 3370, 3901, 3946
BtuMI TCGCGA 1 cut(s) 1116
BveI ACCTGC 4 cut(s) 781, 1970, 2980, 3373
Cac8I GCNNGC 5 cut(s) 633, 637, 839, 1198, 2987
CaiI CAGNNNCTG 1 cut(s) 2834
CfoI GCGC 2 cut(s) 1174, 2982
CseI GACGC 1 cut(s) 1886
CsiI ACCWGGT 1 cut(s) 1636
Csp6I GTAC 5 cut(s) 2344, 3173, 3409, 3483, 3873
CspCI CAANNNNNGTGG 2 cut(s) 2240, 2275
CviQI GTAC 5 cut(s) 2344, 3173, 3409, 3483, 3873
DinI GGCGCC 2 cut(s) 1173, 2981
DraI TTTAAA 1 cut(s) 483
EaeI YGGCCR 1 cut(s) 3036
Eam1104I CTCTTC 4 cut(s) 577, 1502, 1768, 3104
EarI CTCTTC 4 cut(s) 577, 1502, 1768, 3104
Eco130I CCWWGG 5 cut(s) 267, 843, 1836, 2483, 3850
Eco147I AGGCCT 3 cut(s) 1864, 1931, 2814
Eco24I GRGCYC 1 cut(s) 3738
Eco31I GGTCTC 3 cut(s) 1042, 1354, 3767
Eco47I GGWCC 8 cut(s) 373, 1488, 1634, 2093, 2500, 3398, 3764, 3907
Eco57I CTGAAG 6 cut(s) 558, 569, 1487, 1928, 3633, 3663
Eco81I CCTNAGG 2 cut(s) 1239, 3759
Eco88I CYCGRG 1 cut(s) 3042
EcoNI CCTNNNNNAGG 1 cut(s) 777
EcoO109I RGGNCCY 2 cut(s) 373, 3764
EcoRI GAATTC 1 cut(s) 3550
EcoT14I CCWWGG 5 cut(s) 267, 843, 1836, 2483, 3850
EcoT22I ATGCAT 1 cut(s) 2165
EcoT38I GRGCYC 1 cut(s) 3738
EgeI GGCGCC 2 cut(s) 1173, 2981
EheI GGCGCC 2 cut(s) 1173, 2981
ErhI CCWWGG 5 cut(s) 267, 843, 1836, 2483, 3850
FalI AAGNNNNNCTT 4 cut(s) 3040, 3072, 3420, 3452
FaqI GGGAC 5 cut(s) 191, 888, 1501, 2453, 3542
FauI CCCGC 2 cut(s) 1280, 1456
FauNDI CATATG 1 cut(s) 2761
FbaI TGATCA 1 cut(s) 3319
FokI GGATG 9 cut(s) 91, 160, 455, 860, 1257, 2686, 3357, 3908, 3953
FriOI GRGCYC 1 cut(s) 3738
FspBI CTAG 8 cut(s) 401, 971, 1212, 2058, 2177, 2840, 3123, 3833
GlaI GCGC 2 cut(s) 1173, 2981
GsuI CTGGAG 8 cut(s) 342, 617, 798, 1761, 1815, 2431, 2718, 2798
HaeII RGCGCY 2 cut(s) 1175, 2983
HapII CCGG 1 cut(s) 1310
HgaI GACGC 1 cut(s) 1886
HhaI GCGC 2 cut(s) 1174, 2982
Hin1I GRCGYC 3 cut(s) 1172, 1897, 2980
Hin6I GCGC 2 cut(s) 1172, 2980
HinP1I GCGC 2 cut(s) 1172, 2980
HincII GTYRAC 1 cut(s) 1068
HindII GTYRAC 1 cut(s) 1068
HindIII AAGCTT 4 cut(s) 121, 477, 3005, 3029
HpaII CCGG 1 cut(s) 1310
Hpy166II GTNNAC 4 cut(s) 1068, 2212, 2854, 3722
Hpy8I GTNNAC 4 cut(s) 1068, 2212, 2854, 3722
HpyAV CCTTC 7 cut(s) 728, 1464, 1758, 1921, 2951, 3418, 3687
HpyCH4IV ACGT 4 cut(s) 814, 1058, 1306, 2265
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 688, 917, 1169, 2027, 2462, 2986, 3680
HpySE526I ACGT 4 cut(s) 814, 1058, 1306, 2265
Hsp92I GRCGYC 3 cut(s) 1172, 1897, 2980
HspAI GCGC 2 cut(s) 1172, 2980
KasI GGCGCC 2 cut(s) 1171, 2979
Ksp22I TGATCA 1 cut(s) 3319
LmnI GCTCC 7 cut(s) 332, 557, 1075, 1742, 2042, 2128, 2797
MabI ACCWGGT 1 cut(s) 1636
MaeI CTAG 8 cut(s) 401, 971, 1212, 2058, 2177, 2840, 3123, 3833
MaeII ACGT 4 cut(s) 814, 1058, 1306, 2265
MaeIII GTNAC 8 cut(s) 646, 1189, 1264, 2709, 2722, 3385, 3556, 3584
MbiI CCGCTC 2 cut(s) 1287, 3313
MfeI CAATTG 2 cut(s) 2862, 2949
MflI RGATCY 2 cut(s) 232, 3865
MhlI GDGCHC 6 cut(s) 637, 1317, 1528, 2214, 2232, 3738
MlsI TGGCCA 1 cut(s) 3038
MluNI TGGCCA 1 cut(s) 3038
Mly113I GGCGCC 2 cut(s) 1172, 2980
MlyI GAGTC 9 cut(s) 41, 151, 440, 968, 2230, 2530, 2781, 3109, 3815
MmeI TCCRAC 6 cut(s) 125, 420, 1008, 2064, 2775, 2860
Mox20I TGGCCA 1 cut(s) 3038
Mph1103I ATGCAT 1 cut(s) 2165
MroXI GAANNNNTTC 5 cut(s) 571, 759, 1162, 2007, 2743
MscI TGGCCA 1 cut(s) 3038
MslI CAYNNNNRTG 4 cut(s) 359, 2141, 3810, 3935
Msp20I TGGCCA 1 cut(s) 3038
MspA1I CMGCKG 1 cut(s) 3683
MspI CCGG 1 cut(s) 1310
MunI CAATTG 2 cut(s) 2862, 2949
Mva1269I GAATGC 3 cut(s) 2165, 2599, 2659
MvnI CGCG 2 cut(s) 1116, 2985
MwoI GCNNNNNNNGC 8 cut(s) 11, 688, 917, 1169, 2027, 2462, 2986, 3680
NarI GGCGCC 2 cut(s) 1172, 2980
NcoI CCATGG 1 cut(s) 843
NdeI CATATG 1 cut(s) 2761
NmeAIII GCCGAG 1 cut(s) 29
NmuCI GTSAC 1 cut(s) 646
NruI TCGCGA 1 cut(s) 1116
NsiI ATGCAT 1 cut(s) 2165
NspI RCATGY 5 cut(s) 1200, 2167, 2463, 2720, 3744
OliI CACNNNNGTG 1 cut(s) 359
PaeI GCATGC 1 cut(s) 1200
PaqCI CACCTGC 1 cut(s) 1970
PasI CCCWGGG 1 cut(s) 174
PceI AGGCCT 3 cut(s) 1864, 1931, 2814
PciI ACATGT 2 cut(s) 2459, 2716
PcsI WCGNNNNNNNCGW 1 cut(s) 2262
PctI GAATGC 3 cut(s) 2165, 2599, 2659
PdmI GAANNNNTTC 5 cut(s) 571, 759, 1162, 2007, 2743
PfeI GAWTC 4 cut(s) 578, 586, 760, 1589
PflFI GACNNNGTC 1 cut(s) 1034
PflMI CCANNNNNTGG 2 cut(s) 1181, 2090
PfoI TCCNGGA 2 cut(s) 2124, 2734
PleI GAGTC 9 cut(s) 41, 150, 440, 968, 2230, 2530, 2781, 3109, 3815
PluTI GGCGCC 2 cut(s) 1175, 2983
PpsI GAGTC 9 cut(s) 41, 150, 440, 968, 2230, 2530, 2781, 3109, 3815
PpuMI RGGWCCY 2 cut(s) 373, 3764
PscI ACATGT 2 cut(s) 2459, 2716
PshBI ATTAAT 1 cut(s) 2472
PsiI TTATAA 1 cut(s) 515
Psp1406I AACGTT 2 cut(s) 814, 1058
Psp5II RGGWCCY 2 cut(s) 373, 3764
PspPPI RGGWCCY 2 cut(s) 373, 3764
PstNI CAGNNNCTG 1 cut(s) 2834
PsuI RGATCY 2 cut(s) 232, 3865
PsyI GACNNNGTC 1 cut(s) 1034
PvuII CAGCTG 1 cut(s) 3683
RruI TCGCGA 1 cut(s) 1116
RsaI GTAC 5 cut(s) 2345, 3174, 3410, 3484, 3874
RsaNI GTAC 5 cut(s) 2344, 3173, 3409, 3483, 3873
RseI CAYNNNNRTG 4 cut(s) 359, 2141, 3810, 3935
ScaI AGTACT 1 cut(s) 3874
SchI GAGTC 9 cut(s) 41, 151, 440, 968, 2230, 2530, 2781, 3109, 3815
SduI GDGCHC 6 cut(s) 637, 1317, 1528, 2214, 2232, 3738
SexAI ACCWGGT 1 cut(s) 1636
SfcI CTRYAG 6 cut(s) 366, 819, 1803, 2032, 2885, 3768
SfoI GGCGCC 2 cut(s) 1173, 2981
SinI GGWCC 8 cut(s) 373, 1488, 1634, 2093, 2500, 3398, 3764, 3907
SmiMI CAYNNNNRTG 4 cut(s) 359, 2141, 3810, 3935
SmlI CTYRAG 1 cut(s) 1016
SmoI CTYRAG 1 cut(s) 1016
SphI GCATGC 1 cut(s) 1200
SseBI AGGCCT 3 cut(s) 1864, 1931, 2814
SsiI CCGC 6 cut(s) 5, 306, 1287, 1463, 2983, 3313
SspDI GGCGCC 2 cut(s) 1171, 2979
SspI AATATT 3 cut(s) 1698, 2088, 3405
SspMI CTAG 8 cut(s) 401, 971, 1212, 2058, 2177, 2840, 3123, 3833
StuI AGGCCT 3 cut(s) 1864, 1931, 2814
StyI CCWWGG 5 cut(s) 267, 843, 1836, 2483, 3850
TaiI ACGT 4 cut(s) 817, 1061, 1309, 2268
TaqII GACCGA 1 cut(s) 634
TatI WGTACW 3 cut(s) 3172, 3408, 3872
TauI GCSGC 3 cut(s) 309, 2985, 3316
TfiI GAWTC 4 cut(s) 578, 586, 760, 1589
TseFI GTSAC 1 cut(s) 646
Tsp45I GTSAC 1 cut(s) 646
TspGWI ACGGA 1 cut(s) 116
Tth111I GACNNNGTC 1 cut(s) 1034
Van91I CCANNNNNTGG 2 cut(s) 1181, 2090
VneI GTGCAC 1 cut(s) 2210
VpaK11BI GGWCC 8 cut(s) 373, 1488, 1634, 2093, 2500, 3398, 3764, 3907
VspI ATTAAT 1 cut(s) 2472
XagI CCTNNNNNAGG 1 cut(s) 777
XapI RAATTY 8 cut(s) 199, 1477, 2023, 2277, 2390, 2739, 2936, 3550
XceI RCATGY 5 cut(s) 1200, 2167, 2463, 2720, 3744
XcmI CCANNNNNNNNNTGG 3 cut(s) 1336, 2909, 3784
XmnI GAANNNNTTC 5 cut(s) 571, 759, 1162, 2007, 2743
XspI CTAG 8 cut(s) 401, 971, 1212, 2058, 2177, 2840, 3123, 3833
ZrmI AGTACT 1 cut(s) 3874
Zsp2I ATGCAT 1 cut(s) 2165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.