isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1256900.v1.1 MD07G1063600.v1.1 |
| prunus_persica | Prupe.2G075900_v2.0.a1 Prupe.2G075900_v2.0.a1 Prupe.2G075900_v2.0.a1 Prupe.2G075900_v2.0.a1 |
| pyrus_communis | pycom02g21720 pycom02g21760 pycom07g04900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 515 |
| AarI | CACCTGC | 1 cut(s) | 1976 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2957 |
| Acc36I | ACCTGC | 3 cut(s) | 1270, 1976, 3768 |
| Acc65I | GGTACC | 1 cut(s) | 3437 |
| AccB1I | GGYRCC | 3 cut(s) | 98, 1177, 3437 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1187, 1649, 2096 |
| AccBSI | CCGCTC | 1 cut(s) | 3262 |
| AccI | GTMKAC | 1 cut(s) | 3798 |
| AccII | CGCG | 1 cut(s) | 3875 |
| AccIII | TCCGGA | 1 cut(s) | 40 |
| AciI | CCGC | 6 cut(s) | 1759, 2929, 3149, 3167, 3262, 3875 |
| AclWI | GGATC | 4 cut(s) | 227, 1099, 1336, 2263 |
| AcoI | YGGCCR | 2 cut(s) | 2985, 3523 |
| AcsI | RAATTY | 6 cut(s) | 199, 1483, 2050, 2227, 2885, 3505 |
| AcuI | CTGAAG | 5 cut(s) | 564, 690, 1934, 3588, 3618 |
| AcvI | CACGTG | 1 cut(s) | 2306 |
| AfaI | GTAC | 9 cut(s) | 169, 470, 1231, 1683, 2351, 3304, 3439, 3699, 3832 |
| AflII | CTTAAG | 1 cut(s) | 3190 |
| AflIII | ACRYGT | 2 cut(s) | 637, 3037 |
| AhlI | ACTAGT | 1 cut(s) | 2582 |
| AjiI | CACGTC | 1 cut(s) | 638 |
| AjnI | CCWGG | 9 cut(s) | 94, 173, 419, 904, 1642, 1817, 1870, 2937, 3433 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1734, 1766, 2079, 2111 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 139, 171 |
| Alw21I | GWGCWC | 1 cut(s) | 562 |
| Alw26I | GTCTC | 9 cut(s) | 1048, 1360, 1413, 1756, 1826, 1977, 2570, 2727, 3725 |
| AlwI | GGATC | 4 cut(s) | 227, 1099, 1336, 2263 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 471, 2783 |
| Ama87I | CYCGRG | 1 cut(s) | 2991 |
| Aor13HI | TCCGGA | 1 cut(s) | 40 |
| AoxI | GGCC | 9 cut(s) | 51, 417, 1189, 1868, 1935, 2985, 3448, 3523, 3692 |
| ApoI | RAATTY | 6 cut(s) | 199, 1483, 2050, 2227, 2885, 3505 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 184, 216, 311, 343, 1126, 1158, 1391, 1423 |
| AseI | ATTAAT | 1 cut(s) | 2478 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 577, 765, 1168 |
| Asp718I | GGTACC | 1 cut(s) | 3437 |
| AspLEI | GCGC | 1 cut(s) | 2471 |
| AsuC2I | CCSGG | 1 cut(s) | 1950 |
| AsuII | TTCGAA | 1 cut(s) | 1523 |
| AsuNHI | GCTAGC | 1 cut(s) | 1802 |
| AvaI | CYCGRG | 1 cut(s) | 2991 |
| AvaII | GGWCC | 7 cut(s) | 63, 908, 1640, 2099, 2534, 3353, 3722 |
| AxyI | CCTNAGG | 1 cut(s) | 1245 |
| BaeGI | GKGCMC | 2 cut(s) | 1180, 1534 |
| BalI | TGGCCA | 1 cut(s) | 2987 |
| BanI | GGYRCC | 3 cut(s) | 98, 1177, 3437 |
| BanII | GRGCYC | 2 cut(s) | 562, 3231 |
| BbrPI | CACGTG | 1 cut(s) | 2306 |
| BbsI | GAAGAC | 3 cut(s) | 324, 612, 3590 |
| Bbv12I | GWGCWC | 1 cut(s) | 562 |
| BbvCI | CCTCAGC | 1 cut(s) | 80 |
| BccI | CCATC | 9 cut(s) | 547, 848, 1245, 2789, 2855, 3179, 3293, 3806, 3848 |
| BceAI | ACGGC | 2 cut(s) | 2942, 3510 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1974, 2008 |
| BciT130I | CCWGG | 9 cut(s) | 96, 175, 421, 906, 1644, 1819, 1872, 2939, 3435 |
| BclI | TGATCA | 3 cut(s) | 250, 2815, 3268 |
| BcnI | CCSGG | 1 cut(s) | 1950 |
| BcoDI | GTCTC | 9 cut(s) | 1048, 1360, 1413, 1756, 1826, 1977, 2570, 2727, 3725 |
| BcuI | ACTAGT | 1 cut(s) | 2582 |
| BfrI | CTTAAG | 1 cut(s) | 3190 |
| BfuAI | ACCTGC | 3 cut(s) | 1270, 1976, 3768 |
| BglII | AGATCT | 2 cut(s) | 583, 3823 |
| BlpI | GCTNAGC | 1 cut(s) | 3591 |
| BmcAI | AGTACT | 1 cut(s) | 3832 |
| Bme18I | GGWCC | 7 cut(s) | 63, 908, 1640, 2099, 2534, 3353, 3722 |
| BmeT110I | CYCGRG | 1 cut(s) | 2991 |
| BmgBI | CACGTC | 1 cut(s) | 638 |
| BmrI | ACTGGG | 1 cut(s) | 1134 |
| BmsI | GCATC | 7 cut(s) | 394, 850, 892, 913, 1456, 2129, 3434 |
| BmtI | GCTAGC | 1 cut(s) | 1806 |
| BmuI | ACTGGG | 1 cut(s) | 1134 |
| BpiI | GAAGAC | 3 cut(s) | 324, 612, 3590 |
| BpmI | CTGGAG | 5 cut(s) | 342, 804, 1134, 1821, 2747 |
| Bpu10I | CCTNAGC | 2 cut(s) | 80, 3024 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3591 |
| Bpu14I | TTCGAA | 1 cut(s) | 1523 |
| BpuEI | CTTGAG | 1 cut(s) | 912 |
| BpuMI | CCSGG | 1 cut(s) | 1950 |
| BsaAI | YACGTR | 1 cut(s) | 2306 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3816 |
| BsaI | GGTCTC | 4 cut(s) | 1048, 1360, 1977, 3725 |
| BsaWI | WCCGGW | 2 cut(s) | 40, 2415 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1740, 1770 |
| Bse118I | RCCGGY | 1 cut(s) | 3694 |
| Bse1I | ACTGG | 6 cut(s) | 36, 102, 359, 1140, 1151, 1696 |
| Bse21I | CCTNAGG | 1 cut(s) | 1245 |
| Bse3DI | GCAATG | 5 cut(s) | 2194, 2581, 3169, 3322, 3631 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3816 |
| BseAI | TCCGGA | 1 cut(s) | 40 |
| BseBI | CCWGG | 9 cut(s) | 96, 175, 421, 906, 1644, 1819, 1872, 2939, 3435 |
| BseGI | GGATG | 9 cut(s) | 153, 448, 859, 1256, 1787, 2167, 3496, 3859, 3904 |
| BseJI | GATNNNNATC | 1 cut(s) | 3816 |
| BseMI | GCAATG | 5 cut(s) | 2194, 2581, 3169, 3322, 3631 |
| BseMII | CTCAG | 8 cut(s) | 71, 230, 575, 1236, 1458, 1869, 3605, 3818 |
| BseNI | ACTGG | 6 cut(s) | 36, 102, 359, 1140, 1151, 1696 |
| BseRI | GAGGAG | 4 cut(s) | 59, 1899, 2129, 2168 |
| BseSI | GKGCMC | 2 cut(s) | 1180, 1534 |
| BseYI | CCCAGC | 2 cut(s) | 1067, 3445 |
| BsgI | GTGCAG | 2 cut(s) | 3105, 3129 |
| Bsh1236I | CGCG | 1 cut(s) | 3875 |
| BshFI | GGCC | 9 cut(s) | 53, 419, 1191, 1870, 1937, 2987, 3450, 3525, 3694 |
| BshNI | GGYRCC | 3 cut(s) | 98, 1177, 3437 |
| BsiHKAI | GWGCWC | 1 cut(s) | 562 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2991 |
| BsiSI | CCGG | 4 cut(s) | 41, 1949, 2416, 3695 |
| BslFI | GGGAC | 3 cut(s) | 894, 2593, 3497 |
| BsmAI | GTCTC | 9 cut(s) | 1048, 1360, 1413, 1756, 1826, 1977, 2570, 2727, 3725 |
| BsmFI | GGGAC | 3 cut(s) | 894, 2593, 3497 |
| BsmI | GAATGC | 2 cut(s) | 2171, 2662 |
| BsnI | GGCC | 9 cut(s) | 53, 419, 1191, 1870, 1937, 2987, 3450, 3525, 3694 |
| Bso31I | GGTCTC | 4 cut(s) | 1048, 1360, 1977, 3725 |
| BsoBI | CYCGRG | 1 cut(s) | 2991 |
| Bsp119I | TTCGAA | 1 cut(s) | 1523 |
| Bsp1286I | GDGCHC | 4 cut(s) | 562, 1180, 1534, 3231 |
| Bsp13I | TCCGGA | 1 cut(s) | 40 |
| Bsp1407I | TGTACA | 1 cut(s) | 1681 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3591 |
| Bsp19I | CCATGG | 3 cut(s) | 849, 1344, 2946 |
| BspACI | CCGC | 6 cut(s) | 1759, 2929, 3149, 3167, 3262, 3875 |
| BspANI | GGCC | 9 cut(s) | 53, 419, 1191, 1870, 1937, 2987, 3450, 3525, 3694 |
| BspCNI | CTCAG | 8 cut(s) | 72, 229, 574, 1237, 1457, 1870, 3604, 3819 |
| BspEI | TCCGGA | 1 cut(s) | 40 |
| BspFNI | CGCG | 1 cut(s) | 3875 |
| BspHI | TCATGA | 1 cut(s) | 3715 |
| BspMAI | CTGCAG | 5 cut(s) | 316, 1437, 2029, 2754, 3765 |
| BspMI | ACCTGC | 3 cut(s) | 1270, 1976, 3768 |
| BspOI | GCTAGC | 1 cut(s) | 1806 |
| BspPI | GGATC | 4 cut(s) | 227, 1099, 1336, 2263 |
| BspT104I | TTCGAA | 1 cut(s) | 1523 |
| BspT107I | GGYRCC | 3 cut(s) | 98, 1177, 3437 |
| BspTI | CTTAAG | 1 cut(s) | 3190 |
| BspTNI | GGTCTC | 4 cut(s) | 1048, 1360, 1977, 3725 |
| BsrBI | CCGCTC | 1 cut(s) | 3262 |
| BsrDI | GCAATG | 5 cut(s) | 2194, 2581, 3169, 3322, 3631 |
| BsrFI | RCCGGY | 1 cut(s) | 3694 |
| BsrGI | TGTACA | 1 cut(s) | 1681 |
| BsrI | ACTGG | 6 cut(s) | 36, 102, 359, 1140, 1151, 1696 |
| BssAI | RCCGGY | 1 cut(s) | 3694 |
| BssT1I | CCWWGG | 4 cut(s) | 849, 1344, 2489, 2946 |
| Bst2UI | CCWGG | 9 cut(s) | 96, 175, 421, 906, 1644, 1819, 1872, 2939, 3435 |
| Bst6I | CTCTTC | 2 cut(s) | 583, 3053 |
| BstAFI | CTTAAG | 1 cut(s) | 3190 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2033 |
| BstAUI | TGTACA | 1 cut(s) | 1681 |
| BstBAI | YACGTR | 1 cut(s) | 2306 |
| BstBI | TTCGAA | 1 cut(s) | 1523 |
| BstC8I | GCNNGC | 8 cut(s) | 394, 398, 780, 1204, 1310, 1804, 3120, 3523 |
| BstDSI | CCRYGG | 4 cut(s) | 849, 1344, 2946, 3231 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 267, 783 |
| BstF5I | GGATG | 9 cut(s) | 153, 448, 859, 1256, 1787, 2167, 3496, 3859, 3904 |
| BstFNI | CGCG | 1 cut(s) | 3875 |
| BstHHI | GCGC | 1 cut(s) | 2471 |
| BstMAI | GTCTC | 9 cut(s) | 1048, 1360, 1413, 1756, 1826, 1977, 2570, 2727, 3725 |
| BstNI | CCWGG | 9 cut(s) | 96, 175, 421, 906, 1644, 1819, 1872, 2939, 3435 |
| BstNSI | RCATGY | 2 cut(s) | 2469, 3041 |
| BstSLI | GKGCMC | 2 cut(s) | 1180, 1534 |
| BstUI | CGCG | 1 cut(s) | 3875 |
| BstV2I | GAAGAC | 3 cut(s) | 324, 612, 3590 |
| BstX2I | RGATCY | 3 cut(s) | 232, 583, 3823 |
| BstYI | RGATCY | 3 cut(s) | 232, 583, 3823 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1245 |
| BsuRI | GGCC | 9 cut(s) | 53, 419, 1191, 1870, 1937, 2987, 3450, 3525, 3694 |
| BtgI | CCRYGG | 4 cut(s) | 849, 1344, 2946, 3231 |
| BtgZI | GCGATG | 1 cut(s) | 3198 |
| BtrI | CACGTC | 1 cut(s) | 638 |
| BtsCI | GGATG | 9 cut(s) | 153, 448, 859, 1256, 1787, 2167, 3496, 3859, 3904 |
| BtsI | GCAGTG | 3 cut(s) | 187, 209, 2457 |
| BveI | ACCTGC | 3 cut(s) | 1270, 1976, 3768 |
| Cac8I | GCNNGC | 8 cut(s) | 394, 398, 780, 1204, 1310, 1804, 3120, 3523 |
| CaiI | CAGNNNCTG | 2 cut(s) | 471, 2783 |
| CciI | TCATGA | 1 cut(s) | 3715 |
| CfoI | GCGC | 1 cut(s) | 2471 |
| Cfr10I | RCCGGY | 1 cut(s) | 3694 |
| CseI | GACGC | 2 cut(s) | 1301, 2223 |
| CsiI | ACCWGGT | 2 cut(s) | 1642, 2937 |
| Csp6I | GTAC | 9 cut(s) | 168, 469, 1230, 1682, 2350, 3303, 3438, 3698, 3831 |
| CviQI | GTAC | 9 cut(s) | 168, 469, 1230, 1682, 2350, 3303, 3438, 3698, 3831 |
| DraI | TTTAAA | 2 cut(s) | 483, 3915 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2957 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2957 |
| EaeI | YGGCCR | 2 cut(s) | 2985, 3523 |
| Eam1104I | CTCTTC | 2 cut(s) | 583, 3053 |
| EarI | CTCTTC | 2 cut(s) | 583, 3053 |
| Ecl136II | GAGCTC | 1 cut(s) | 560 |
| Eco130I | CCWWGG | 4 cut(s) | 849, 1344, 2489, 2946 |
| Eco147I | AGGCCT | 2 cut(s) | 1870, 1937 |
| Eco24I | GRGCYC | 2 cut(s) | 562, 3231 |
| Eco31I | GGTCTC | 4 cut(s) | 1048, 1360, 1977, 3725 |
| Eco47I | GGWCC | 7 cut(s) | 63, 908, 1640, 2099, 2534, 3353, 3722 |
| Eco53kI | GAGCTC | 1 cut(s) | 560 |
| Eco57I | CTGAAG | 5 cut(s) | 564, 690, 1934, 3588, 3618 |
| Eco72I | CACGTG | 1 cut(s) | 2306 |
| Eco81I | CCTNAGG | 1 cut(s) | 1245 |
| Eco88I | CYCGRG | 1 cut(s) | 2991 |
| EcoICRI | GAGCTC | 1 cut(s) | 560 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 267, 783 |
| EcoO109I | RGGNCCY | 3 cut(s) | 63, 2534, 3722 |
| EcoRII | CCWGG | 9 cut(s) | 94, 173, 419, 904, 1642, 1817, 1870, 2937, 3433 |
| EcoT14I | CCWWGG | 4 cut(s) | 849, 1344, 2489, 2946 |
| EcoT22I | ATGCAT | 2 cut(s) | 328, 2171 |
| EcoT38I | GRGCYC | 2 cut(s) | 562, 3231 |
| ErhI | CCWWGG | 4 cut(s) | 849, 1344, 2489, 2946 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2989, 3021 |
| FaqI | GGGAC | 3 cut(s) | 894, 2593, 3497 |
| FauNDI | CATATG | 2 cut(s) | 2144, 2710 |
| FbaI | TGATCA | 3 cut(s) | 250, 2815, 3268 |
| FblI | GTMKAC | 1 cut(s) | 3798 |
| FokI | GGATG | 9 cut(s) | 160, 455, 866, 1263, 1774, 2174, 3503, 3866, 3911 |
| FriOI | GRGCYC | 2 cut(s) | 562, 3231 |
| GlaI | GCGC | 1 cut(s) | 2470 |
| GsaI | CCCAGC | 2 cut(s) | 1071, 3449 |
| GsuI | CTGGAG | 5 cut(s) | 342, 804, 1134, 1821, 2747 |
| HaeIII | GGCC | 9 cut(s) | 53, 419, 1191, 1870, 1937, 2987, 3450, 3525, 3694 |
| HapII | CCGG | 4 cut(s) | 41, 1949, 2416, 3695 |
| HgaI | GACGC | 2 cut(s) | 1301, 2223 |
| HhaI | GCGC | 1 cut(s) | 2471 |
| Hin6I | GCGC | 1 cut(s) | 2469 |
| HinP1I | GCGC | 1 cut(s) | 2469 |
| HincII | GTYRAC | 2 cut(s) | 2560, 2761 |
| HindII | GTYRAC | 2 cut(s) | 2560, 2761 |
| HindIII | AAGCTT | 4 cut(s) | 121, 477, 2954, 2978 |
| HpaII | CCGG | 4 cut(s) | 41, 1949, 2416, 3695 |
| Hpy166II | GTNNAC | 4 cut(s) | 1273, 2560, 2761, 3799 |
| Hpy8I | GTNNAC | 4 cut(s) | 1273, 2560, 2761, 3799 |
| HpyCH4IV | ACGT | 2 cut(s) | 637, 2305 |
| HpySE526I | ACGT | 2 cut(s) | 637, 2305 |
| HspAI | GCGC | 1 cut(s) | 2469 |
| Kpn2I | TCCGGA | 1 cut(s) | 40 |
| KpnI | GGTACC | 1 cut(s) | 3441 |
| Ksp22I | TGATCA | 3 cut(s) | 250, 2815, 3268 |
| LmnI | GCTCC | 5 cut(s) | 557, 1081, 2134, 2746, 3259 |
| LweI | GCATC | 7 cut(s) | 394, 850, 892, 913, 1456, 2129, 3434 |
| MabI | ACCWGGT | 2 cut(s) | 1642, 2937 |
| MaeII | ACGT | 2 cut(s) | 637, 2305 |
| MaeIII | GTNAC | 6 cut(s) | 652, 1153, 1672, 2933, 3539, 3628 |
| MbiI | CCGCTC | 1 cut(s) | 3262 |
| MfeI | CAATTG | 3 cut(s) | 2811, 2898, 3250 |
| MflI | RGATCY | 3 cut(s) | 232, 583, 3823 |
| MhlI | GDGCHC | 4 cut(s) | 562, 1180, 1534, 3231 |
| MlsI | TGGCCA | 1 cut(s) | 2987 |
| MluNI | TGGCCA | 1 cut(s) | 2987 |
| MlyI | GAGTC | 9 cut(s) | 151, 974, 1828, 2236, 2312, 2730, 2972, 3058, 3773 |
| MmeI | TCCRAC | 4 cut(s) | 125, 420, 2724, 2809 |
| Mox20I | TGGCCA | 1 cut(s) | 2987 |
| Mph1103I | ATGCAT | 2 cut(s) | 328, 2171 |
| MroI | TCCGGA | 1 cut(s) | 40 |
| MroXI | GAANNNNTTC | 3 cut(s) | 577, 765, 1168 |
| MscI | TGGCCA | 1 cut(s) | 2987 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2147, 3893 |
| Msp20I | TGGCCA | 1 cut(s) | 2987 |
| MspA1I | CMGCKG | 1 cut(s) | 2024 |
| MspCI | CTTAAG | 1 cut(s) | 3190 |
| MspI | CCGG | 4 cut(s) | 41, 1949, 2416, 3695 |
| MunI | CAATTG | 3 cut(s) | 2811, 2898, 3250 |
| Mva1269I | GAATGC | 2 cut(s) | 2171, 2662 |
| MvaI | CCWGG | 9 cut(s) | 96, 175, 421, 906, 1644, 1819, 1872, 2939, 3435 |
| MvnI | CGCG | 1 cut(s) | 3875 |
| NciI | CCSGG | 1 cut(s) | 1950 |
| NcoI | CCATGG | 3 cut(s) | 849, 1344, 2946 |
| NdeI | CATATG | 2 cut(s) | 2144, 2710 |
| NheI | GCTAGC | 1 cut(s) | 1802 |
| NmeAIII | GCCGAG | 1 cut(s) | 3476 |
| NmuCI | GTSAC | 5 cut(s) | 652, 1153, 1672, 2933, 3628 |
| NsiI | ATGCAT | 2 cut(s) | 328, 2171 |
| NspI | RCATGY | 2 cut(s) | 2469, 3041 |
| NspV | TTCGAA | 1 cut(s) | 1523 |
| PaeR7I | CTCGAG | 1 cut(s) | 2991 |
| PagI | TCATGA | 1 cut(s) | 3715 |
| PaqCI | CACCTGC | 1 cut(s) | 1976 |
| PasI | CCCWGGG | 1 cut(s) | 174 |
| PceI | AGGCCT | 2 cut(s) | 1870, 1937 |
| PciI | ACATGT | 1 cut(s) | 3037 |
| PctI | GAATGC | 2 cut(s) | 2171, 2662 |
| PdmI | GAANNNNTTC | 3 cut(s) | 577, 765, 1168 |
| PflFI | GACNNNGTC | 1 cut(s) | 1040 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1187, 1649, 2096 |
| PleI | GAGTC | 9 cut(s) | 150, 974, 1828, 2236, 2312, 2730, 2971, 3058, 3773 |
| PmaCI | CACGTG | 1 cut(s) | 2306 |
| PmlI | CACGTG | 1 cut(s) | 2306 |
| PpsI | GAGTC | 9 cut(s) | 150, 974, 1828, 2236, 2312, 2730, 2971, 3058, 3773 |
| Ppu21I | YACGTR | 1 cut(s) | 2306 |
| PpuMI | RGGWCCY | 3 cut(s) | 63, 2534, 3722 |
| PscI | ACATGT | 1 cut(s) | 3037 |
| PshBI | ATTAAT | 1 cut(s) | 2478 |
| PsiI | TTATAA | 1 cut(s) | 515 |
| Psp124BI | GAGCTC | 1 cut(s) | 562 |
| Psp5II | RGGWCCY | 3 cut(s) | 63, 2534, 3722 |
| Psp6I | CCWGG | 9 cut(s) | 94, 173, 419, 904, 1642, 1817, 1870, 2937, 3433 |
| PspCI | CACGTG | 1 cut(s) | 2306 |
| PspFI | CCCAGC | 2 cut(s) | 1067, 3445 |
| PspGI | CCWGG | 9 cut(s) | 94, 173, 419, 904, 1642, 1817, 1870, 2937, 3433 |
| PspPPI | RGGWCCY | 3 cut(s) | 63, 2534, 3722 |
| PspXI | VCTCGAGB | 1 cut(s) | 2991 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1422, 1454 |
| PstI | CTGCAG | 5 cut(s) | 316, 1437, 2029, 2754, 3765 |
| PstNI | CAGNNNCTG | 2 cut(s) | 471, 2783 |
| PsuI | RGATCY | 3 cut(s) | 232, 583, 3823 |
| PsyI | GACNNNGTC | 1 cut(s) | 1040 |
| PvuII | CAGCTG | 1 cut(s) | 2024 |
| RsaI | GTAC | 9 cut(s) | 169, 470, 1231, 1683, 2351, 3304, 3439, 3699, 3832 |
| RsaNI | GTAC | 9 cut(s) | 168, 469, 1230, 1682, 2350, 3303, 3438, 3698, 3831 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2147, 3893 |
| SacI | GAGCTC | 1 cut(s) | 562 |
| ScaI | AGTACT | 1 cut(s) | 3832 |
| SchI | GAGTC | 9 cut(s) | 151, 974, 1828, 2236, 2312, 2730, 2972, 3058, 3773 |
| SduI | GDGCHC | 4 cut(s) | 562, 1180, 1534, 3231 |
| SexAI | ACCWGGT | 2 cut(s) | 1642, 2937 |
| SfaNI | GCATC | 7 cut(s) | 394, 850, 892, 913, 1456, 2129, 3434 |
| Sfr274I | CTCGAG | 1 cut(s) | 2991 |
| SfuI | TTCGAA | 1 cut(s) | 1523 |
| SinI | GGWCC | 7 cut(s) | 63, 908, 1640, 2099, 2534, 3353, 3722 |
| SlaI | CTCGAG | 1 cut(s) | 2991 |
| SmiI | ATTTAAAT | 1 cut(s) | 3915 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2147, 3893 |
| SmlI | CTYRAG | 3 cut(s) | 927, 2991, 3190 |
| SmoI | CTYRAG | 3 cut(s) | 927, 2991, 3190 |
| SpeI | ACTAGT | 1 cut(s) | 2582 |
| SseBI | AGGCCT | 2 cut(s) | 1870, 1937 |
| SsiI | CCGC | 6 cut(s) | 1759, 2929, 3149, 3167, 3262, 3875 |
| SspI | AATATT | 1 cut(s) | 3360 |
| SstI | GAGCTC | 1 cut(s) | 562 |
| StuI | AGGCCT | 2 cut(s) | 1870, 1937 |
| StyI | CCWWGG | 4 cut(s) | 849, 1344, 2489, 2946 |
| SwaI | ATTTAAAT | 1 cut(s) | 3915 |
| TaiI | ACGT | 2 cut(s) | 640, 2308 |
| TaqII | GACCGA | 1 cut(s) | 640 |
| TatI | WGTACW | 2 cut(s) | 1681, 3830 |
| TauI | GCSGC | 2 cut(s) | 2932, 3265 |
| TseFI | GTSAC | 5 cut(s) | 652, 1153, 1672, 2933, 3628 |
| Tsp45I | GTSAC | 5 cut(s) | 652, 1153, 1672, 2933, 3628 |
| TspGWI | ACGGA | 4 cut(s) | 116, 2545, 3171, 3272 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1040 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1187, 1649, 2096 |
| Vha464I | CTTAAG | 1 cut(s) | 3190 |
| VpaK11BI | GGWCC | 7 cut(s) | 63, 908, 1640, 2099, 2534, 3353, 3722 |
| VspI | ATTAAT | 1 cut(s) | 2478 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 267, 783 |
| XapI | RAATTY | 6 cut(s) | 199, 1483, 2050, 2227, 2885, 3505 |
| XceI | RCATGY | 2 cut(s) | 2469, 3041 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1825, 2288, 2858 |
| XhoI | CTCGAG | 1 cut(s) | 2991 |
| XmiI | GTMKAC | 1 cut(s) | 3798 |
| XmnI | GAANNNNTTC | 3 cut(s) | 577, 765, 1168 |
| ZrmI | AGTACT | 1 cut(s) | 3832 |
| Zsp2I | ATGCAT | 2 cut(s) | 328, 2171 |