Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0015280

Physical Location & Seq

Genomic Coordinates Forward (+)

31625566 .. 31627173

Gene Structure 1608 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1246400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGAGGGGGTGATGATGGACGTCGTTCTGGTGTGTTTGGTGCTTGTGTTTTTCCGGCTATGGTGGCGTTACTGGTCTGGAGGCGGGCGTAAGAACCTTCCGCCGGGGCCGCCGGGGTGGCCAATAGTGGGAAATCTAATCCAAGTCATCCTTCAACGTCGGCACTTCATCTACGTCGTCCGCGACTTACGTGCAAAGTACGGACCAATCTTTACCATGCAGATGGGGCAGCGGACTCTCATAATCGTCACCAGCTCCGACCTCATCCACGAGGCTCTCGTCCAGAGAGGTCCCGAGTTTGCGTCCCGCCCTGCTGACTCCCCCATCCGCCTCCTCTTCAGCGTCGGAAAGTGCGCCATCAACTCCGCAGAGTACGGCCCTCTCTGGCGTACCTTGCGCAGAAACTTCGTCACCGAGTTGATCAACCCAGCGAGGATAAGGCAGTGCAGCTGGATCAGAAACTGGGCTATCAAATCCCACATGGACAGGCTGTTAAAGTCCGACGGCGGCATTGTCCATGTGATGAGCGAATGCCGGCTCACCACCTGTAGCATCCTCATATGCTTGTGTTTCGGGGCGAAAATCTCCGACGAGAAGATCAAGACTATCGAGAGCGTGTTGAAAGACGTTATGATGATGACAACTCCGAAGCTCCCCGATTTCCTGCCAGTGCTGACTCCGTTGTTCCGCAGGCAGGTCGGGGAGGCGAAAGAGCTGAGGAGGAGGCAGTTGGAGTGTTTGGTTCCACTTGTTAGAGACAGAAAAGCATTTGTTCTTGAAAGTGATAATGTTGAGGATGAAAATGTTAGAAAGATAATGGTGAGTCCAAAGGGCGCAGCTTATATTGACTCCTTGTTTGAGCTGGAGGTGCCCGGAAGAGGAAAAGACGGAGGCCGCAGGCGGTTGGAAGAGGAGGAGCTGGTGACGCTAGTCTCCGAAGTCATTAACGCTGGGACGGATACGAGTGCTACTGCGTTGGAGTGGGCTTTGTTTCATTTGGTGATGGACCAAAAAATTCAAGAGAAGCTCTACAAGGAAATCGTTGATTGTGTAGGGACGGATCGCAGTCCTTACACAGATCAACAAAAGCCGCACGAAGAGGTGATCACTGAGAGTGACGTGGAGAAAATGAGCTACCTTTCCGCGGTGGTGAAGGAAACATTCCGGCGTCACCCACCAAGCCACTTCGTCTTGTCACACGCAGCAGTGAAGGACACGGAGCTCGGCGGGTACACCGTGCCCGCGGATGCGAGCGTGGAGTTTTACACTGCATGGGTGACTGAGGATCCGGAGATGTGGGTGGACCCGGGTGAATTCCTACCGGAGAGGTTCATGGCGGGAGGAGACGGGGTTGACGTGGACGTGACGGGGACCAAAGGGGTGAAGATGGTGCCGTTTGGAGCTGGCAGGCGGATCTGCCCGGCGTGGACGTTAGGAACTCTGCATATAAACCTACTACTTGCCCGGATGGTGCACGCTTTTAAATGGTTGCCAGTACCAGATTCCCCGCCGGACCCGACTGAGACGTTTGCTTTTACGGTTATCATGAAGAACCCTCTCAAGGCCATCATTGTTCCTAGGTCGTCATTGTCGTCAACCAAAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0010143 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0043170 GO:0044550 GO:0052722 GO:0055114 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00140 ko00232 ko00380 ko00460 ko00500 ko00591 ko00830 ko00940 ko00980 ko00982 ko01100 ko01110 ko05204 map00140 map00232 map00380 map00460 map00500 map00591 map00830 map00940 map00980 map00982 map01100 map01110 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

536

Amino Acids

60.45

Weight (kDa)

7.97

Isoelectric Point (pI)

45.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	34 - 518	6.5e-85	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015280)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11600
fragaria_vesca	FvH4_6g28770
malus_domestica	MD01G1175700.v1.1 MD07G1246400.v1.1
prunus_persica	Prupe.7G219700_v2.0.a1 Prupe.7G219700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0133181
rosa_laevigata	RLG00000019319
rosa_multiflora	Rmu_sc0028113.1_g000004
rosa_roxburghii	Rroxscaffold_2G00111330
rosa_rugosa	Rorug02G0310600
rosa_samantha	Rh2AG363000 Rh2BG368500 Rh2CG346300 Rh2DG385600
rosa_wichuraiana	Rw2G029500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	24
Acc16I	TGCGCA	1 cut(s)	398
Acc36I	ACCTGC	1 cut(s)	685
AccB1I	GGYRCC	2 cut(s)	868, 1390
AccII	CGCG	3 cut(s)	183, 1145, 1244
AccIII	TCCGGA	1 cut(s)	1288
AclWI	GGATC	5 cut(s)	461, 1068, 1280, 1293, 1421
AcoI	YGGCCR	1 cut(s)	119
AcsI	RAATTY	2 cut(s)	1014, 1313
AcuI	CTGAAG	1 cut(s)	322
AcyI	GRCGYC	2 cut(s)	21, 1168
AfaI	GTAC	5 cut(s)	200, 374, 391, 1232, 1497
AfiI	CCNNNNNNNGG	6 cut(s)	103, 128, 694, 878, 1144, 1561
AgsI	TTSAA	4 cut(s)	155, 622, 779, 1019
AjiI	CACGTC	3 cut(s)	1120, 1357, 1363
AjuI	GAANNNNNNNTTGG	2 cut(s)	135, 167
Alw21I	GWGCWC	2 cut(s)	1224, 1476
Alw26I	GTCTC	4 cut(s)	750, 937, 1338, 1517
Alw44I	GTGCAC	1 cut(s)	1472
AlwI	GGATC	5 cut(s)	461, 1068, 1280, 1293, 1421
AlwNI	CAGNNNCTG	1 cut(s)	462
Ama87I	CYCGRG	2 cut(s)	293, 1306
Aor13HI	TCCGGA	1 cut(s)	1288
AoxI	GGCC	5 cut(s)	107, 119, 376, 892, 1563
ApaLI	GTGCAC	1 cut(s)	1472
ApeKI	GCWGC	4 cut(s)	229, 447, 836, 1202
ApoI	RAATTY	2 cut(s)	1014, 1313
ArsI	GACNNNNNNTTYG	2 cut(s)	839, 871
AspA2I	CCTAGG	1 cut(s)	1577
AspLEI	GCGC	3 cut(s)	356, 399, 836
AspS9I	GGNCC	8 cut(s)	107, 203, 290, 377, 1006, 1303, 1371, 1513
AsuC2I	CCSGG	7 cut(s)	105, 114, 873, 1307, 1308, 1421, 1465
AvaI	CYCGRG	2 cut(s)	293, 1306
AvaII	GGWCC	6 cut(s)	203, 290, 1006, 1303, 1371, 1513
AvrII	CCTAGG	1 cut(s)	1577
BaeGI	GKGCMC	3 cut(s)	873, 1242, 1476
BalI	TGGCCA	1 cut(s)	121
BamHI	GGATCC	1 cut(s)	1285
BanI	GGYRCC	2 cut(s)	868, 1390
BanII	GRGCYC	1 cut(s)	1224
BauI	CACGAG	1 cut(s)	269
Bbv12I	GWGCWC	2 cut(s)	1224, 1476
BbvCI	CCTCAGC	1 cut(s)	716
BbvI	GCAGC	4 cut(s)	241, 459, 848, 1214
BccI	CCATC	8 cut(s)	10, 217, 332, 365, 997, 1381, 1462, 1574
BceAI	ACGGC	3 cut(s)	391, 520, 1378
BcgI	CGANNNNNNTGC	6 cut(s)	173, 207, 388, 422, 679, 713
BciVI	GTATCC	1 cut(s)	952
BclI	TGATCA	2 cut(s)	420, 1104
BcnI	CCSGG	7 cut(s)	105, 114, 873, 1307, 1308, 1421, 1465
BcoDI	GTCTC	4 cut(s)	750, 937, 1338, 1517
BfaI	CTAG	2 cut(s)	929, 1578
BfmI	CTRYAG	1 cut(s)	547
BfuAI	ACCTGC	1 cut(s)	685
BfuI	GTATCC	1 cut(s)	952
BglI	GCCNNNNNGGC	1 cut(s)	118
BisI	GCNGC	8 cut(s)	110, 230, 448, 508, 837, 895, 1091, 1203
BlnI	CCTAGG	1 cut(s)	1577
BlsI	GCNGC	8 cut(s)	111, 231, 449, 509, 838, 896, 1092, 1204
Bme1390I	CCNGG	7 cut(s)	105, 114, 873, 1307, 1308, 1421, 1465
Bme18I	GGWCC	6 cut(s)	203, 290, 1006, 1303, 1371, 1513
BmeT110I	CYCGRG	2 cut(s)	293, 1306
BmgBI	CACGTC	3 cut(s)	1120, 1357, 1363
BmgT120I	GGNCC	8 cut(s)	107, 203, 290, 377, 1006, 1303, 1371, 1513
BmiI	GGNNCC	9 cut(s)	108, 292, 744, 870, 1287, 1305, 1372, 1392, 1515
BmrFI	CCNGG	7 cut(s)	105, 114, 873, 1307, 1308, 1421, 1465
BmrI	ACTGGG	1 cut(s)	472
BmsI	GCATC	2 cut(s)	561, 1237
BmuI	ACTGGG	1 cut(s)	472
BoxI	GACNNNNGTC	1 cut(s)	929
BpmI	CTGGAG	2 cut(s)	99, 884
Bpu10I	CCTNAGC	1 cut(s)	716
BpuEI	CTTGAG	1 cut(s)	1544
BpuMI	CCSGG	7 cut(s)	105, 114, 873, 1307, 1308, 1421, 1465
BsaAI	YACGTR	1 cut(s)	191
BsaHI	GRCGYC	2 cut(s)	21, 1168
BsaJI	CCNNGG	6 cut(s)	104, 113, 1143, 1242, 1306, 1577
BsaWI	WCCGGW	2 cut(s)	1288, 1321
BsaXI	ACNNNNNCTCC	2 cut(s)	1335, 1365
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 128, 694, 878, 1144, 1561
Bse118I	RCCGGY	1 cut(s)	534
Bse1I	ACTGG	4 cut(s)	77, 467, 668, 1493
BseAI	TCCGGA	1 cut(s)	1288
BseDI	CCNNGG	6 cut(s)	104, 113, 1143, 1242, 1306, 1577
BseGI	GGATG	7 cut(s)	147, 264, 324, 552, 802, 1252, 1473
BseLI	CCNNNNNNNGG	6 cut(s)	103, 128, 694, 878, 1144, 1561
BseMII	CTCAG	4 cut(s)	707, 1101, 1272, 1512
BseNI	ACTGG	4 cut(s)	77, 467, 668, 1493
BseRI	GAGGAG	6 cut(s)	323, 733, 736, 926, 929, 1356
BseSI	GKGCMC	3 cut(s)	873, 1242, 1476
BseXI	GCAGC	4 cut(s)	241, 459, 848, 1214
BseYI	CCCAGC	2 cut(s)	427, 950
BsgI	GTGCAG	1 cut(s)	466
Bsh1236I	CGCG	3 cut(s)	183, 1145, 1244
BshFI	GGCC	5 cut(s)	109, 121, 378, 894, 1565
BshNI	GGYRCC	2 cut(s)	868, 1390
BsiHKAI	GWGCWC	2 cut(s)	1224, 1476
BsiHKCI	CYCGRG	2 cut(s)	293, 1306
BslFI	GGGAC	5 cut(s)	276, 289, 967, 1069, 1384
BslI	CCNNNNNNNGG	6 cut(s)	103, 128, 694, 878, 1144, 1561
BsmAI	GTCTC	4 cut(s)	750, 937, 1338, 1517
BsmBI	CGTCTC	2 cut(s)	1338, 1517
BsmFI	GGGAC	5 cut(s)	276, 289, 967, 1069, 1384
BsmI	GAATGC	1 cut(s)	536
BsnI	GGCC	5 cut(s)	109, 121, 378, 894, 1565
BsoBI	CYCGRG	2 cut(s)	293, 1306
Bsp1286I	GDGCHC	4 cut(s)	873, 1224, 1242, 1476
Bsp13I	TCCGGA	1 cut(s)	1288
Bsp143I	GATC	8 cut(s)	420, 453, 597, 1060, 1078, 1104, 1285, 1413
BspANI	GGCC	5 cut(s)	109, 121, 378, 894, 1565
BspCNI	CTCAG	4 cut(s)	708, 1102, 1273, 1513
BspEI	TCCGGA	1 cut(s)	1288
BspFNI	CGCG	3 cut(s)	183, 1145, 1244
BspHI	TCATGA	1 cut(s)	1545
BspLI	GGNNCC	9 cut(s)	108, 292, 744, 870, 1287, 1305, 1372, 1392, 1515
BspMI	ACCTGC	1 cut(s)	685
BspPI	GGATC	5 cut(s)	461, 1068, 1280, 1293, 1421
BspT107I	GGYRCC	2 cut(s)	868, 1390
BsrFI	RCCGGY	1 cut(s)	534
BsrI	ACTGG	4 cut(s)	77, 467, 668, 1493
BssAI	RCCGGY	1 cut(s)	534
BssECI	CCNNGG	6 cut(s)	104, 113, 1143, 1242, 1306, 1577
BssMI	GATC	8 cut(s)	420, 453, 597, 1060, 1078, 1104, 1285, 1413
BssNI	GRCGYC	2 cut(s)	21, 1168
BssSI	CACGAG	1 cut(s)	269
BssT1I	CCWWGG	1 cut(s)	1577
Bst2BI	CACGAG	1 cut(s)	269
Bst4CI	ACNGT	2 cut(s)	1237, 1540
Bst6I	CTCTTC	4 cut(s)	341, 871, 903, 1092
BstACI	GRCGYC	2 cut(s)	21, 1168
BstBAI	YACGTR	1 cut(s)	191
BstC8I	GCNNGC	9 cut(s)	86, 536, 692, 899, 1242, 1252, 1405, 1409, 1476
BstDEI	CTNAG	4 cut(s)	716, 1110, 1281, 1521
BstDSI	CCRYGG	2 cut(s)	1143, 1242
BstF5I	GGATG	7 cut(s)	147, 264, 324, 552, 802, 1252, 1473
BstFNI	CGCG	3 cut(s)	183, 1145, 1244
BstHHI	GCGC	3 cut(s)	356, 399, 836
BstKTI	GATC	8 cut(s)	423, 456, 600, 1063, 1081, 1107, 1288, 1416
BstMAI	GTCTC	4 cut(s)	750, 937, 1338, 1517
BstMBI	GATC	8 cut(s)	420, 453, 597, 1060, 1078, 1104, 1285, 1413
BstMWI	GCNNNNNNNGC	7 cut(s)	64, 109, 118, 226, 394, 868, 925
BstPAI	GACNNNNGTC	1 cut(s)	929
BstSCI	CCNGG	7 cut(s)	103, 112, 871, 1305, 1306, 1419, 1463
BstSFI	CTRYAG	1 cut(s)	547
BstSLI	GKGCMC	3 cut(s)	873, 1242, 1476
BstUI	CGCG	3 cut(s)	183, 1145, 1244
BstV1I	GCAGC	4 cut(s)	241, 459, 848, 1214
BstX2I	RGATCY	2 cut(s)	1285, 1413
BstXI	CCANNNNNNTGG	1 cut(s)	223
BstYI	RGATCY	2 cut(s)	1285, 1413
BsuI	GTATCC	1 cut(s)	952
BsuRI	GGCC	5 cut(s)	109, 121, 378, 894, 1565
BtgI	CCRYGG	2 cut(s)	1143, 1242
BtrI	CACGTC	3 cut(s)	1120, 1357, 1363
BtsCI	GGATG	7 cut(s)	147, 264, 324, 552, 802, 1252, 1473
BtsI	GCAGTG	3 cut(s)	449, 1212, 1266
BtsIMutI	CAGTG	5 cut(s)	449, 675, 1107, 1212, 1266
BveI	ACCTGC	1 cut(s)	685
Cac8I	GCNNGC	9 cut(s)	86, 536, 692, 899, 1242, 1252, 1405, 1409, 1476
CaiI	CAGNNNCTG	1 cut(s)	462
CciI	TCATGA	1 cut(s)	1545
CfoI	GCGC	3 cut(s)	356, 399, 836
Cfr10I	RCCGGY	1 cut(s)	534
Cfr13I	GGNCC	8 cut(s)	107, 203, 290, 377, 1006, 1303, 1371, 1513
Cfr42I	CCGCGG	2 cut(s)	1146, 1245
Cfr9I	CCCGGG	1 cut(s)	1306
CseI	GACGC	4 cut(s)	291, 331, 934, 1157
Csp6I	GTAC	5 cut(s)	199, 373, 390, 1231, 1496
CviAII	CATG	6 cut(s)	217, 481, 518, 1272, 1333, 1546
CviQI	GTAC	5 cut(s)	199, 373, 390, 1231, 1496
DdeI	CTNAG	4 cut(s)	716, 1110, 1281, 1521
DpnI	GATC	8 cut(s)	422, 455, 599, 1062, 1080, 1106, 1287, 1415
DpnII	GATC	8 cut(s)	420, 453, 597, 1060, 1078, 1104, 1285, 1413
DraI	TTTAAA	1 cut(s)	1483
EaeI	YGGCCR	1 cut(s)	119
Eam1104I	CTCTTC	4 cut(s)	341, 871, 903, 1092
EarI	CTCTTC	4 cut(s)	341, 871, 903, 1092
EciI	GGCGGA	3 cut(s)	90, 317, 1426
Ecl136II	GAGCTC	1 cut(s)	1222
Eco130I	CCWWGG	1 cut(s)	1577
Eco24I	GRGCYC	1 cut(s)	1224
Eco47I	GGWCC	6 cut(s)	203, 290, 1006, 1303, 1371, 1513
Eco53kI	GAGCTC	1 cut(s)	1222
Eco57I	CTGAAG	1 cut(s)	322
Eco88I	CYCGRG	2 cut(s)	293, 1306
EcoICRI	GAGCTC	1 cut(s)	1222
EcoO109I	RGGNCCY	1 cut(s)	290
EcoRI	GAATTC	1 cut(s)	1313
EcoT14I	CCWWGG	1 cut(s)	1577
EcoT38I	GRGCYC	1 cut(s)	1224
ErhI	CCWWGG	1 cut(s)	1577
Esp3I	CGTCTC	2 cut(s)	1338, 1517
FaeI	CATG	6 cut(s)	220, 484, 521, 1275, 1336, 1549
FalI	AAGNNNNNCTT	2 cut(s)	135, 167
FaqI	GGGAC	5 cut(s)	276, 289, 967, 1069, 1384
FatI	CATG	6 cut(s)	216, 480, 517, 1271, 1332, 1545
FauI	CCCGC	6 cut(s)	77, 314, 1220, 1249, 1330, 1515
FauNDI	CATATG	1 cut(s)	560
FbaI	TGATCA	2 cut(s)	420, 1104
Fnu4HI	GCNGC	8 cut(s)	110, 230, 448, 508, 837, 895, 1091, 1203
FokI	GGATG	7 cut(s)	134, 251, 311, 539, 809, 1259, 1480
FriOI	GRGCYC	1 cut(s)	1224
Fsp4HI	GCNGC	8 cut(s)	110, 230, 448, 508, 837, 895, 1091, 1203
FspBI	CTAG	2 cut(s)	929, 1578
FspI	TGCGCA	1 cut(s)	398
GlaI	GCGC	3 cut(s)	355, 398, 835
GluI	GCNGC	8 cut(s)	110, 230, 448, 508, 837, 895, 1091, 1203
GsaI	CCCAGC	2 cut(s)	431, 954
GsuI	CTGGAG	2 cut(s)	99, 884
HaeIII	GGCC	5 cut(s)	109, 121, 378, 894, 1565
HgaI	GACGC	4 cut(s)	291, 331, 934, 1157
HhaI	GCGC	3 cut(s)	356, 399, 836
Hin1I	GRCGYC	2 cut(s)	21, 1168
Hin1II	CATG	6 cut(s)	220, 484, 521, 1275, 1336, 1549
Hin6I	GCGC	3 cut(s)	354, 397, 834
HinP1I	GCGC	3 cut(s)	354, 397, 834
HincII	GTYRAC	2 cut(s)	1354, 1596
HindII	GTYRAC	2 cut(s)	1354, 1596
HinfI	GANTC	6 cut(s)	235, 317, 676, 823, 848, 1502
Hpy166II	GTNNAC	7 cut(s)	1233, 1303, 1354, 1360, 1428, 1474, 1596
Hpy188I	TCNGA	7 cut(s)	259, 347, 458, 502, 589, 648, 937
Hpy188III	TCNNGA	9 cut(s)	78, 283, 293, 601, 610, 776, 1019, 1289, 1546
Hpy8I	GTNNAC	7 cut(s)	1233, 1303, 1354, 1360, 1428, 1474, 1596
Hpy99I	CGWCG	6 cut(s)	26, 162, 179, 347, 506, 593
HpyAV	CCTTC	4 cut(s)	107, 161, 1147, 1204
HpyCH4III	ACNGT	2 cut(s)	1237, 1540
HpyCH4V	TGCA	6 cut(s)	194, 220, 447, 1271, 1444, 1474
HpyF10VI	GCNNNNNNNGC	7 cut(s)	64, 109, 118, 226, 394, 868, 925
HpyF3I	CTNAG	4 cut(s)	716, 1110, 1281, 1521
Hsp92I	GRCGYC	2 cut(s)	21, 1168
Hsp92II	CATG	6 cut(s)	220, 484, 521, 1275, 1336, 1549
HspAI	GCGC	3 cut(s)	354, 397, 834
Kpn2I	TCCGGA	1 cut(s)	1288
KroI	GCCGGC	1 cut(s)	534
KroNI	GCCGGC	1 cut(s)	536
Ksp22I	TGATCA	2 cut(s)	420, 1104
KspI	CCGCGG	2 cut(s)	1146, 1245
Kzo9I	GATC	8 cut(s)	420, 453, 597, 1060, 1078, 1104, 1285, 1413
LmnI	GCTCC	5 cut(s)	260, 657, 916, 1219, 1400
Lsp1109I	GCAGC	4 cut(s)	241, 459, 848, 1214
LweI	GCATC	2 cut(s)	561, 1237
MaeI	CTAG	2 cut(s)	929, 1578
MaeIII	GTNAC	9 cut(s)	68, 247, 409, 922, 1115, 1169, 1194, 1276, 1363
MalI	GATC	8 cut(s)	422, 455, 599, 1062, 1080, 1106, 1287, 1415
MboI	GATC	8 cut(s)	420, 453, 597, 1060, 1078, 1104, 1285, 1413
MboII	GAAGA	7 cut(s)	328, 607, 888, 920, 1109, 1396, 1561
MflI	RGATCY	2 cut(s)	1285, 1413
MhlI	GDGCHC	4 cut(s)	873, 1224, 1242, 1476
MlsI	TGGCCA	1 cut(s)	121
MluCI	AATT	2 cut(s)	1014, 1313
MluNI	TGGCCA	1 cut(s)	121
MlyI	GAGTC	5 cut(s)	229, 311, 670, 832, 842
MmeI	TCCRAC	7 cut(s)	282, 325, 525, 612, 711, 885, 957
Mox20I	TGGCCA	1 cut(s)	121
MroI	TCCGGA	1 cut(s)	1288
MroNI	GCCGGC	1 cut(s)	534
MscI	TGGCCA	1 cut(s)	121
MseI	TTAA	3 cut(s)	494, 945, 1482
MslI	CAYNNNNRTG	1 cut(s)	221
Msp20I	TGGCCA	1 cut(s)	121
MspA1I	CMGCKG	4 cut(s)	232, 450, 1145, 1244
MspR9I	CCNGG	7 cut(s)	105, 114, 873, 1307, 1308, 1421, 1465
Mva1269I	GAATGC	1 cut(s)	536
MvnI	CGCG	3 cut(s)	183, 1145, 1244
MwoI	GCNNNNNNNGC	7 cut(s)	64, 109, 118, 226, 394, 868, 925
NaeI	GCCGGC	1 cut(s)	536
NciI	CCSGG	7 cut(s)	105, 114, 873, 1307, 1308, 1421, 1465
NdeI	CATATG	1 cut(s)	560
NdeII	GATC	8 cut(s)	420, 453, 597, 1060, 1078, 1104, 1285, 1413
NgoMIV	GCCGGC	1 cut(s)	534
NlaIII	CATG	6 cut(s)	220, 484, 521, 1275, 1336, 1549
NlaIV	GGNNCC	9 cut(s)	108, 292, 744, 870, 1287, 1305, 1372, 1392, 1515
NmeAIII	GCCGAG	1 cut(s)	1203
NmuCI	GTSAC	8 cut(s)	247, 409, 922, 1115, 1169, 1194, 1276, 1363
NsbI	TGCGCA	1 cut(s)	398
PagI	TCATGA	1 cut(s)	1545
PcsI	WCGNNNNNNNCGW	4 cut(s)	180, 276, 1353, 1589
PctI	GAATGC	1 cut(s)	536
PdiI	GCCGGC	1 cut(s)	536
PfeI	GAWTC	1 cut(s)	1502
PkrI	GCNGC	8 cut(s)	111, 231, 449, 509, 838, 896, 1092, 1204
PleI	GAGTC	5 cut(s)	229, 311, 670, 831, 842
PpsI	GAGTC	5 cut(s)	229, 311, 670, 831, 842
Ppu21I	YACGTR	1 cut(s)	191
PpuMI	RGGWCCY	1 cut(s)	290
PshAI	GACNNNNGTC	1 cut(s)	929
Psp124BI	GAGCTC	1 cut(s)	1224
Psp5II	RGGWCCY	1 cut(s)	290
PspFI	CCCAGC	2 cut(s)	427, 950
PspN4I	GGNNCC	9 cut(s)	108, 292, 744, 870, 1287, 1305, 1372, 1392, 1515
PspPI	GGNCC	8 cut(s)	107, 203, 290, 377, 1006, 1303, 1371, 1513
PspPPI	RGGWCCY	1 cut(s)	290
PstNI	CAGNNNCTG	1 cut(s)	462
PsuI	RGATCY	2 cut(s)	1285, 1413
PvuII	CAGCTG	1 cut(s)	450
RsaI	GTAC	5 cut(s)	200, 374, 391, 1232, 1497
RsaNI	GTAC	5 cut(s)	199, 373, 390, 1231, 1496
RseI	CAYNNNNRTG	1 cut(s)	221
SacI	GAGCTC	1 cut(s)	1224
SacII	CCGCGG	2 cut(s)	1146, 1245
SaqAI	TTAA	3 cut(s)	494, 945, 1482
SatI	GCNGC	8 cut(s)	110, 230, 448, 508, 837, 895, 1091, 1203
Sau3AI	GATC	8 cut(s)	420, 453, 597, 1060, 1078, 1104, 1285, 1413
Sau96I	GGNCC	8 cut(s)	107, 203, 290, 377, 1006, 1303, 1371, 1513
SchI	GAGTC	5 cut(s)	229, 311, 670, 832, 842
ScrFI	CCNGG	7 cut(s)	105, 114, 873, 1307, 1308, 1421, 1465
SduI	GDGCHC	4 cut(s)	873, 1224, 1242, 1476
SfaNI	GCATC	2 cut(s)	561, 1237
SfcI	CTRYAG	1 cut(s)	547
Sfr303I	CCGCGG	2 cut(s)	1146, 1245
SgrBI	CCGCGG	2 cut(s)	1146, 1245
SinI	GGWCC	6 cut(s)	203, 290, 1006, 1303, 1371, 1513
SmaI	CCCGGG	1 cut(s)	1308
SmiMI	CAYNNNNRTG	1 cut(s)	221
SmlI	CTYRAG	1 cut(s)	1559
SmoI	CTYRAG	1 cut(s)	1559
Sse9I	AATT	2 cut(s)	1014, 1313
SspMI	CTAG	2 cut(s)	929, 1578
SstI	GAGCTC	1 cut(s)	1224
StyD4I	CCNGG	7 cut(s)	103, 112, 871, 1305, 1306, 1419, 1463
StyI	CCWWGG	1 cut(s)	1577
TaaI	ACNGT	2 cut(s)	1237, 1540
TaqI	TCGA	1 cut(s)	609
TasI	AATT	2 cut(s)	1014, 1313
TauI	GCSGC	4 cut(s)	112, 510, 897, 1093
TfiI	GAWTC	1 cut(s)	1502
Tru1I	TTAA	3 cut(s)	494, 945, 1482
Tru9I	TTAA	3 cut(s)	494, 945, 1482
TscAI	CASTG	5 cut(s)	449, 675, 1114, 1212, 1273
TseFI	GTSAC	8 cut(s)	247, 409, 922, 1115, 1169, 1194, 1276, 1363
TseI	GCWGC	4 cut(s)	229, 447, 836, 1202
Tsp45I	GTSAC	8 cut(s)	247, 409, 922, 1115, 1169, 1194, 1276, 1363
TspDTI	ATGAA	5 cut(s)	157, 813, 983, 1321, 1562
TspGWI	ACGGA	6 cut(s)	216, 669, 903, 971, 1073, 1232
TspMI	CCCGGG	1 cut(s)	1306
TspRI	CASTG	5 cut(s)	449, 675, 1114, 1212, 1273
VneI	GTGCAC	1 cut(s)	1472
VpaK11BI	GGWCC	6 cut(s)	203, 290, 1006, 1303, 1371, 1513
XapI	RAATTY	2 cut(s)	1014, 1313
XmaI	CCCGGG	1 cut(s)	1306
XmaJI	CCTAGG	1 cut(s)	1577
XspI	CTAG	2 cut(s)	929, 1578
ZraI	GACGTC	1 cut(s)	22

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.