Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0015280

Physical Location & Seq

Genomic Coordinates Reverse (-)

55802086 .. 55804274

Gene Structure 2189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG385600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGAAGATGGAGCTAATGGACGTGTTCATCCTTTTTTTGGGGGCCGTTTTTCTCCGGCTATGGTGGCGCTACTGGTCCGTCACAGGCGGCGGAAAGAAGAATCTTCCACCGGGTCCGCCGGGCTGGCCGGTGGTGGGAAACCTGATCCAAGTGATCCTCGAACGTCGACCGTTCATCTTTGTAGTACGCGATTTACGTAAAAAGTATGGACCCATCTTCAGCATGCAAATGGGCCAACGCACACTCATCATCATCACCAGCTCCGACCTCATCCACGAAGGCCTCGTCCAGCGGGGTCCCGACTTCGCCAGCCGCCCCTCCGACTCTCCCATCCGACTCATCTTCAGCGTCGGAAAGTGTGCTATCAACTCCGGTCAGTACGGCCCTCTCTGGCGCACCCTGCGCCGCAACTTCGTGACGGAGCTTATCAACCCTACCAGGATACGCCAGTGCAGCTGGATCCGTAACTGGGCGCTGGAGCATCATATGAAGCGCCTCAAGTCCGAGGCCACGGAGCACGGCTCCGTGGAGGTGATTAGCAACTGCAGGCTCACCATCTGCAGCGTGCTCATCTGCCTCTGCTTCGGCGCGAAGATCTCAGAGGAGAGAATCAAAGTCATTGAGAGTATACTCAAGGATGTCATGATGATGACGACTCCGAAGCTCCCCGACTTCCTGCCGCTGCTGACTCCGCTGTTCCGACGGCAGGTGAAGGAGGCCAAAAAGCTACGGAAGAAGCAAATGGAGTGTCTGGTTCCGCTGATAAGAAACCGAAAGGCTTTTCTCGATGGAGGGGGTGTTGTCAACGAGGAGATGGTGAGTCCAAATGGTGCTGCGTATATCGACTCTCTGTTCAGGCTTGACGTGCCCGGAAGAGGTAAGCTGGGAGAGGAAGAGCTCGTCACTCTTGTCTCGGAAGCCATCAACGCCGGGACGGACACGAGTGCTTCGACGACGGAGTGGGCGTTGCTTAATTTGGTGATGAACCAGGAGATCCAAGATAAGCTGTATAAGGAGATTGTTGAGAGTGTTGGGAAAGATGGGGTGGTCACCGAGAATGACGTGGAGAAAATGCCCTATCTTACAGCGGTGGTTAAAGAGACTTTCCGGCGACACCCACCGAGCCACTTTCTTCTGTCGCACGCGGCGGTGAAGGAGACGGAGTTCGCTGGGTACACCATTCCGGCCGATGCCAGCGTGGAGTTTTACACTGCATGGGTGACGGAGGATCCGGTGATGTGGAAGGATCCGGGCGAGTTCCGACCCGAGAGGTTCTTGGATGGAGATGGAGTTGACGTGGACATAACTGGTACAAAAGGAGTGAAGATGGTGCCATTCGGAGCGGGGCGGCGGATCTGCCCGGCATGGACGTTGGGGACATTGCACATAAACTTGATGCTGGCTAGGATGGTGCAGGCCTTCAAGTGGTTGCCGGTTCCGGGTTCCCCACCCGACCCGACTGAGACCTTTGCTTTTACTGTTGTCATGAAGAACCCTCTCAAGGCTGTGATTGTGCCTAGGTCAATGATCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0010143 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0043170 GO:0044550 GO:0052722 GO:0055114 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00140 ko00232 ko00380 ko00460 ko00500 ko00591 ko00830 ko00940 ko00980 ko00982 ko01100 ko01110 ko05204 map00140 map00232 map00380 map00460 map00500 map00591 map00830 map00940 map00980 map00982 map01100 map01110 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

511

Amino Acids

57.64

Weight (kDa)

9.11

Isoelectric Point (pI)

40.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	36 - 499	6.8e-95	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015280)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11600
fragaria_vesca	FvH4_6g28770
malus_domestica	MD01G1175700.v1.1 MD07G1246400.v1.1
prunus_persica	Prupe.7G219700_v2.0.a1 Prupe.7G219700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0133181
rosa_laevigata	RLG00000019319
rosa_multiflora	Rmu_sc0028113.1_g000004
rosa_roxburghii	Rroxscaffold_2G00111330
rosa_rugosa	Rorug02G0310600
rosa_samantha	Rh2AG363000 Rh2BG368500 Rh2CG346300 Rh2DG385600
rosa_wichuraiana	Rw2G029500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	697
Acc36I	ACCTGC	1 cut(s)	697
AccB1I	GGYRCC	1 cut(s)	1330
AccBSI	CCGCTC	1 cut(s)	1343
AccI	GTMKAC	2 cut(s)	166, 628
AccII	CGCG	3 cut(s)	189, 590, 1145
AcoI	YGGCCR	2 cut(s)	125, 1185
AcuI	CTGAAG	2 cut(s)	202, 328
AfaI	GTAC	4 cut(s)	186, 380, 1175, 1312
AfiI	CCNNNNNNNGG	8 cut(s)	37, 134, 469, 706, 875, 1425, 1439, 1501
AflIII	ACRYGT	1 cut(s)	21
AgsI	TTSAA	1 cut(s)	1423
AjiI	CACGTC	4 cut(s)	22, 865, 1063, 1297
AjnI	CCWGG	2 cut(s)	437, 987
AloI	GAACNNNNNNTCC	2 cut(s)	1148, 1180
AluBI	AGCT	9 cut(s)	13, 261, 424, 456, 664, 727, 883, 898, 1006
AluI	AGCT	9 cut(s)	13, 261, 424, 456, 664, 727, 883, 898, 1006
Alw21I	GWGCWC	3 cut(s)	519, 570, 900
Alw26I	GTCTC	4 cut(s)	916, 1094, 1151, 1457
Ama87I	CYCGRG	1 cut(s)	1265
AoxI	GGCC	9 cut(s)	42, 125, 232, 280, 382, 507, 717, 1185, 1416
ApeKI	GCWGC	4 cut(s)	453, 561, 682, 833
ArsI	GACNNNNNNTTYG	4 cut(s)	270, 302, 733, 765
AspA2I	CCTAGG	1 cut(s)	1517
AspLEI	GCGC	6 cut(s)	69, 396, 405, 475, 495, 590
AspS9I	GGNCC	7 cut(s)	42, 75, 113, 209, 232, 296, 383
AsuC2I	CCSGG	7 cut(s)	111, 120, 870, 931, 1251, 1361, 1440
AvaI	CYCGRG	1 cut(s)	1265
AvaII	GGWCC	4 cut(s)	75, 113, 209, 296
AvrII	CCTAGG	1 cut(s)	1517
BaeGI	GKGCMC	1 cut(s)	870
BaeI	ACNNNNGTAYC	2 cut(s)	434, 467
BamHI	GGATCC	3 cut(s)	459, 1228, 1246
BanI	GGYRCC	1 cut(s)	1330
BanII	GRGCYC	1 cut(s)	900
BauI	CACGAG	1 cut(s)	940
Bbv12I	GWGCWC	3 cut(s)	519, 570, 900
BbvI	GCAGC	4 cut(s)	465, 573, 669, 820
BceAI	ACGGC	4 cut(s)	29, 397, 535, 719
BciT130I	CCWGG	2 cut(s)	439, 989
BciVI	GTATCC	1 cut(s)	435
BclI	TGATCA	1 cut(s)	1527
BcnI	CCSGG	7 cut(s)	111, 120, 870, 931, 1251, 1361, 1440
BcoDI	GTCTC	4 cut(s)	916, 1094, 1151, 1457
BfaI	CTAG	2 cut(s)	1404, 1518
BfmI	CTRYAG	2 cut(s)	544, 559
BfoI	RGCGCY	3 cut(s)	70, 476, 496
BfuAI	ACCTGC	1 cut(s)	697
BfuI	GTATCC	1 cut(s)	435
BglI	GCCNNNNNGGC	1 cut(s)	124
BglII	AGATCT	1 cut(s)	594
BlnI	CCTAGG	1 cut(s)	1517
Bme1390I	CCNGG	9 cut(s)	111, 120, 439, 870, 931, 989, 1251, 1361, 1440
Bme18I	GGWCC	4 cut(s)	75, 113, 209, 296
BmeT110I	CYCGRG	1 cut(s)	1265
BmgBI	CACGTC	4 cut(s)	22, 865, 1063, 1297
BmgT120I	GGNCC	7 cut(s)	42, 75, 113, 209, 232, 296, 383
BmrFI	CCNGG	9 cut(s)	111, 120, 439, 870, 931, 989, 1251, 1361, 1440
BmrI	ACTGGG	1 cut(s)	478
BmsI	GCATC	3 cut(s)	490, 1180, 1386
BmuI	ACTGGG	1 cut(s)	478
BplI	GAGNNNNNCTC	2 cut(s)	506, 538
BpmI	CTGGAG	1 cut(s)	497
BpuEI	CTTGAG	3 cut(s)	482, 617, 1484
BpuMI	CCSGG	7 cut(s)	111, 120, 870, 931, 1251, 1361, 1440
BsaAI	YACGTR	1 cut(s)	197
BsaI	GGTCTC	1 cut(s)	1457
BsaJI	CCNNGG	4 cut(s)	504, 510, 525, 1517
BsaWI	WCCGGW	2 cut(s)	371, 1231
Bsc4I	CCNNNNNNNGG	8 cut(s)	37, 134, 469, 706, 875, 1425, 1439, 1501
Bse118I	RCCGGY	2 cut(s)	127, 1432
Bse1I	ACTGG	4 cut(s)	77, 448, 473, 1312
Bse3DI	GCAATG	1 cut(s)	1379
BseBI	CCWGG	2 cut(s)	439, 989
BseDI	CCNNGG	4 cut(s)	504, 510, 525, 1517
BseGI	GGATG	6 cut(s)	27, 270, 330, 643, 1285, 1413
BseLI	CCNNNNNNNGG	8 cut(s)	37, 134, 469, 706, 875, 1425, 1439, 1501
BseMI	GCAATG	1 cut(s)	1379
BseMII	CTCAG	2 cut(s)	612, 1452
BseNI	ACTGG	4 cut(s)	77, 448, 473, 1312
BseRI	GAGGAG	2 cut(s)	617, 824
BseSI	GKGCMC	1 cut(s)	870
BseX3I	CGGCCG	1 cut(s)	1185
BseXI	GCAGC	4 cut(s)	465, 573, 669, 820
BseYI	CCCAGC	2 cut(s)	883, 1169
BsgI	GTGCAG	2 cut(s)	472, 1433
Bsh1236I	CGCG	3 cut(s)	189, 590, 1145
Bsh1285I	CGRYCG	2 cut(s)	170, 1188
BshFI	GGCC	9 cut(s)	44, 127, 234, 282, 384, 509, 719, 1187, 1418
BshNI	GGYRCC	1 cut(s)	1330
BsiEI	CGRYCG	2 cut(s)	170, 1188
BsiHKAI	GWGCWC	3 cut(s)	519, 570, 900
BsiHKCI	CYCGRG	1 cut(s)	1265
BslFI	GGGAC	3 cut(s)	282, 946, 1390
BslI	CCNNNNNNNGG	8 cut(s)	37, 134, 469, 706, 875, 1425, 1439, 1501
BsmAI	GTCTC	4 cut(s)	916, 1094, 1151, 1457
BsmBI	CGTCTC	1 cut(s)	1151
BsmFI	GGGAC	3 cut(s)	282, 946, 1390
BsnI	GGCC	9 cut(s)	44, 127, 234, 282, 384, 509, 719, 1187, 1418
Bso31I	GGTCTC	1 cut(s)	1457
BsoBI	CYCGRG	1 cut(s)	1265
Bsp1286I	GDGCHC	4 cut(s)	519, 570, 870, 900
Bsp143I	GATC	9 cut(s)	144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
BspANI	GGCC	9 cut(s)	44, 127, 234, 282, 384, 509, 719, 1187, 1418
BspCNI	CTCAG	2 cut(s)	611, 1453
BspFNI	CGCG	3 cut(s)	189, 590, 1145
BspHI	TCATGA	2 cut(s)	642, 1485
BspMAI	CTGCAG	2 cut(s)	548, 563
BspMI	ACCTGC	1 cut(s)	697
BspQI	GCTCTTC	1 cut(s)	888
BspT107I	GGYRCC	1 cut(s)	1330
BspTNI	GGTCTC	1 cut(s)	1457
BsrBI	CCGCTC	1 cut(s)	1343
BsrDI	GCAATG	1 cut(s)	1379
BsrFI	RCCGGY	2 cut(s)	127, 1432
BsrI	ACTGG	4 cut(s)	77, 448, 473, 1312
BssAI	RCCGGY	2 cut(s)	127, 1432
BssECI	CCNNGG	4 cut(s)	504, 510, 525, 1517
BssMI	GATC	9 cut(s)	144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
BssNAI	GTATAC	1 cut(s)	629
BssSI	CACGAG	1 cut(s)	940
BssT1I	CCWWGG	1 cut(s)	1517
Bst1107I	GTATAC	1 cut(s)	629
Bst2BI	CACGAG	1 cut(s)	940
Bst2UI	CCWGG	2 cut(s)	439, 989
Bst4CI	ACNGT	2 cut(s)	171, 1480
Bst6I	CTCTTC	2 cut(s)	868, 888
BstBAI	YACGTR	1 cut(s)	197
BstC8I	GCNNGC	9 cut(s)	125, 224, 310, 548, 566, 1143, 1195, 1401, 1416
BstDEI	CTNAG	2 cut(s)	598, 1461
BstDSI	CCRYGG	2 cut(s)	510, 525
BstEII	GGTNACC	1 cut(s)	1048
BstF5I	GGATG	6 cut(s)	27, 270, 330, 643, 1285, 1413
BstFNI	CGCG	3 cut(s)	189, 590, 1145
BstH2I	RGCGCY	3 cut(s)	70, 476, 496
BstHHI	GCGC	6 cut(s)	69, 396, 405, 475, 495, 590
BstKTI	GATC	9 cut(s)	147, 156, 462, 597, 996, 1231, 1249, 1356, 1530
BstMAI	GTCTC	4 cut(s)	916, 1094, 1151, 1457
BstMBI	GATC	9 cut(s)	144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
BstMCI	CGRYCG	2 cut(s)	170, 1188
BstMWI	GCNNNNNNNGC	8 cut(s)	64, 124, 400, 402, 453, 691, 865, 926
BstNI	CCWGG	2 cut(s)	439, 989
BstNSI	RCATGY	1 cut(s)	226
BstPI	GGTNACC	1 cut(s)	1048
BstSCI	CCNGG	9 cut(s)	109, 118, 437, 868, 929, 987, 1249, 1359, 1438
BstSFI	CTRYAG	2 cut(s)	544, 559
BstSLI	GKGCMC	1 cut(s)	870
BstSNI	TACGTA	1 cut(s)	197
BstUI	CGCG	3 cut(s)	189, 590, 1145
BstV1I	GCAGC	4 cut(s)	465, 573, 669, 820
BstX2I	RGATCY	6 cut(s)	459, 594, 993, 1228, 1246, 1353
BstYI	RGATCY	6 cut(s)	459, 594, 993, 1228, 1246, 1353
BstZ17I	GTATAC	1 cut(s)	629
BstZI	CGGCCG	1 cut(s)	1185
BsuI	GTATCC	1 cut(s)	435
BsuRI	GGCC	9 cut(s)	44, 127, 234, 282, 384, 509, 719, 1187, 1418
BtgI	CCRYGG	2 cut(s)	510, 525
BtrI	CACGTC	4 cut(s)	22, 865, 1063, 1297
BtsCI	GGATG	6 cut(s)	27, 270, 330, 643, 1285, 1413
BtsI	GCAGTG	1 cut(s)	1209
BtsIMutI	CAGTG	2 cut(s)	455, 1209
BveI	ACCTGC	1 cut(s)	697
Cac8I	GCNNGC	9 cut(s)	125, 224, 310, 548, 566, 1143, 1195, 1401, 1416
CciI	TCATGA	2 cut(s)	642, 1485
CfoI	GCGC	6 cut(s)	69, 396, 405, 475, 495, 590
Cfr10I	RCCGGY	2 cut(s)	127, 1432
Cfr13I	GGNCC	7 cut(s)	42, 75, 113, 209, 232, 296, 383
CseI	GACGC	1 cut(s)	337
Csp6I	GTAC	4 cut(s)	185, 379, 1174, 1311
CviAII	CATG	5 cut(s)	223, 643, 1215, 1365, 1486
CviQI	GTAC	4 cut(s)	185, 379, 1174, 1311
DdeI	CTNAG	2 cut(s)	598, 1461
DpnI	GATC	9 cut(s)	146, 155, 461, 596, 995, 1230, 1248, 1355, 1529
DpnII	GATC	9 cut(s)	144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
EaeI	YGGCCR	2 cut(s)	125, 1185
EagI	CGGCCG	1 cut(s)	1185
Eam1104I	CTCTTC	2 cut(s)	868, 888
EarI	CTCTTC	2 cut(s)	868, 888
EciI	GGCGGA	3 cut(s)	105, 105, 1366
Ecl136II	GAGCTC	1 cut(s)	898
EclXI	CGGCCG	1 cut(s)	1185
Eco105I	TACGTA	1 cut(s)	197
Eco130I	CCWWGG	1 cut(s)	1517
Eco147I	AGGCCT	2 cut(s)	282, 1418
Eco24I	GRGCYC	1 cut(s)	900
Eco31I	GGTCTC	1 cut(s)	1457
Eco47I	GGWCC	4 cut(s)	75, 113, 209, 296
Eco52I	CGGCCG	1 cut(s)	1185
Eco53kI	GAGCTC	1 cut(s)	898
Eco57I	CTGAAG	2 cut(s)	202, 328
Eco88I	CYCGRG	1 cut(s)	1265
Eco91I	GGTNACC	1 cut(s)	1048
EcoICRI	GAGCTC	1 cut(s)	898
EcoO109I	RGGNCCY	1 cut(s)	296
EcoO65I	GGTNACC	1 cut(s)	1048
EcoRII	CCWGG	2 cut(s)	437, 987
EcoT14I	CCWWGG	1 cut(s)	1517
EcoT38I	GRGCYC	1 cut(s)	900
ErhI	CCWWGG	1 cut(s)	1517
Esp3I	CGTCTC	1 cut(s)	1151
FaeI	CATG	5 cut(s)	226, 646, 1218, 1368, 1489
FaqI	GGGAC	3 cut(s)	282, 946, 1390
FatI	CATG	5 cut(s)	222, 642, 1214, 1364, 1485
FauI	CCCGC	2 cut(s)	285, 1336
FauNDI	CATATG	1 cut(s)	486
FbaI	TGATCA	1 cut(s)	1527
FblI	GTMKAC	2 cut(s)	166, 628
FokI	GGATG	6 cut(s)	14, 257, 317, 650, 1292, 1420
FriOI	GRGCYC	1 cut(s)	900
FspBI	CTAG	2 cut(s)	1404, 1518
GlaI	GCGC	6 cut(s)	68, 395, 404, 474, 494, 589
GsaI	CCCAGC	2 cut(s)	887, 1173
GsuI	CTGGAG	1 cut(s)	497
HaeII	RGCGCY	3 cut(s)	70, 476, 496
HaeIII	GGCC	9 cut(s)	44, 127, 234, 282, 384, 509, 719, 1187, 1418
HgaI	GACGC	1 cut(s)	337
HhaI	GCGC	6 cut(s)	69, 396, 405, 475, 495, 590
Hin1II	CATG	5 cut(s)	226, 646, 1218, 1368, 1489
Hin6I	GCGC	6 cut(s)	67, 394, 403, 473, 493, 588
HinP1I	GCGC	6 cut(s)	67, 394, 403, 473, 493, 588
HincII	GTYRAC	3 cut(s)	167, 805, 1294
HindII	GTYRAC	3 cut(s)	167, 805, 1294
HinfI	GANTC	8 cut(s)	100, 323, 336, 609, 655, 688, 820, 845
Hpy166II	GTNNAC	6 cut(s)	167, 629, 805, 1176, 1294, 1300
Hpy188III	TCNNGA	5 cut(s)	299, 415, 643, 785, 1486
Hpy8I	GTNNAC	6 cut(s)	167, 629, 805, 1176, 1294, 1300
Hpy99I	CGWCG	5 cut(s)	168, 353, 705, 955, 958
HpyAV	CCTTC	5 cut(s)	272, 706, 1147, 1237, 1429
HpyCH4III	ACNGT	2 cut(s)	171, 1480
HpyCH4IV	ACGT	7 cut(s)	21, 163, 196, 864, 1062, 1296, 1370
HpyCH4V	TGCA	7 cut(s)	226, 453, 546, 561, 1214, 1384, 1414
HpyF10VI	GCNNNNNNNGC	8 cut(s)	64, 124, 400, 402, 453, 691, 865, 926
HpyF3I	CTNAG	2 cut(s)	598, 1461
HpySE526I	ACGT	7 cut(s)	21, 163, 196, 864, 1062, 1296, 1370
Hsp92II	CATG	5 cut(s)	226, 646, 1218, 1368, 1489
HspAI	GCGC	6 cut(s)	67, 394, 403, 473, 493, 588
KflI	GGGWCCC	1 cut(s)	296
Ksp22I	TGATCA	1 cut(s)	1527
Kzo9I	GATC	9 cut(s)	144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
LguI	GCTCTTC	1 cut(s)	888
LmnI	GCTCC	8 cut(s)	10, 266, 421, 478, 514, 527, 669, 1340
Lsp1109I	GCAGC	4 cut(s)	465, 573, 669, 820
LweI	GCATC	3 cut(s)	490, 1180, 1386
MaeI	CTAG	2 cut(s)	1404, 1518
MaeII	ACGT	7 cut(s)	21, 163, 196, 864, 1062, 1296, 1370
MaeIII	GTNAC	6 cut(s)	79, 415, 464, 901, 1048, 1219
MalI	GATC	9 cut(s)	146, 155, 461, 596, 995, 1230, 1248, 1355, 1529
MbiI	CCGCTC	1 cut(s)	1343
MboI	GATC	9 cut(s)	144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
MflI	RGATCY	6 cut(s)	459, 594, 993, 1228, 1246, 1353
MhlI	GDGCHC	4 cut(s)	519, 570, 870, 900
MluCI	AATT	1 cut(s)	973
MlyI	GAGTC	6 cut(s)	317, 330, 649, 682, 829, 839
MmeI	TCCRAC	6 cut(s)	288, 331, 345, 358, 724, 1285
MseI	TTAA	2 cut(s)	972, 1095
MslI	CAYNNNNRTG	2 cut(s)	227, 647
MspA1I	CMGCKG	6 cut(s)	292, 456, 682, 694, 760, 1088
MspR9I	CCNGG	9 cut(s)	111, 120, 439, 870, 931, 989, 1251, 1361, 1440
MvaI	CCWGG	2 cut(s)	439, 989
MvnI	CGCG	3 cut(s)	189, 590, 1145
MwoI	GCNNNNNNNGC	8 cut(s)	64, 124, 400, 402, 453, 691, 865, 926
NciI	CCSGG	7 cut(s)	111, 120, 870, 931, 1251, 1361, 1440
NdeI	CATATG	1 cut(s)	486
NdeII	GATC	9 cut(s)	144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
NlaIII	CATG	5 cut(s)	226, 646, 1218, 1368, 1489
NmuCI	GTSAC	5 cut(s)	79, 415, 901, 1048, 1219
NspI	RCATGY	1 cut(s)	226
PaeI	GCATGC	1 cut(s)	226
PagI	TCATGA	2 cut(s)	642, 1485
PaqCI	CACCTGC	1 cut(s)	697
PceI	AGGCCT	2 cut(s)	282, 1418
PciSI	GCTCTTC	1 cut(s)	888
PcsI	WCGNNNNNNNCGW	4 cut(s)	193, 282, 947, 962
PfeI	GAWTC	2 cut(s)	100, 609
PleI	GAGTC	6 cut(s)	317, 330, 649, 682, 828, 839
PpsI	GAGTC	6 cut(s)	317, 330, 649, 682, 828, 839
Ppu21I	YACGTR	1 cut(s)	197
PpuMI	RGGWCCY	1 cut(s)	296
Psp124BI	GAGCTC	1 cut(s)	900
Psp5II	RGGWCCY	1 cut(s)	296
Psp6I	CCWGG	2 cut(s)	437, 987
PspEI	GGTNACC	1 cut(s)	1048
PspFI	CCCAGC	2 cut(s)	883, 1169
PspGI	CCWGG	2 cut(s)	437, 987
PspPI	GGNCC	7 cut(s)	42, 75, 113, 209, 232, 296, 383
PspPPI	RGGWCCY	1 cut(s)	296
PstI	CTGCAG	2 cut(s)	548, 563
PsuI	RGATCY	6 cut(s)	459, 594, 993, 1228, 1246, 1353
PvuII	CAGCTG	1 cut(s)	456
RsaI	GTAC	4 cut(s)	186, 380, 1175, 1312
RsaNI	GTAC	4 cut(s)	185, 379, 1174, 1311
RseI	CAYNNNNRTG	2 cut(s)	227, 647
SacI	GAGCTC	1 cut(s)	900
SalI	GTCGAC	1 cut(s)	165
SapI	GCTCTTC	1 cut(s)	888
SaqAI	TTAA	2 cut(s)	972, 1095
Sau3AI	GATC	9 cut(s)	144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
Sau96I	GGNCC	7 cut(s)	42, 75, 113, 209, 232, 296, 383
SchI	GAGTC	6 cut(s)	317, 330, 649, 682, 829, 839
ScrFI	CCNGG	9 cut(s)	111, 120, 439, 870, 931, 989, 1251, 1361, 1440
SduI	GDGCHC	4 cut(s)	519, 570, 870, 900
SfaNI	GCATC	3 cut(s)	490, 1180, 1386
SfcI	CTRYAG	2 cut(s)	544, 559
SinI	GGWCC	4 cut(s)	75, 113, 209, 296
SmiMI	CAYNNNNRTG	2 cut(s)	227, 647
SmlI	CTYRAG	3 cut(s)	497, 632, 1499
SmoI	CTYRAG	3 cut(s)	497, 632, 1499
SnaBI	TACGTA	1 cut(s)	197
SphI	GCATGC	1 cut(s)	226
Sse9I	AATT	1 cut(s)	973
SseBI	AGGCCT	2 cut(s)	282, 1418
SspMI	CTAG	2 cut(s)	1404, 1518
SstI	GAGCTC	1 cut(s)	900
StuI	AGGCCT	2 cut(s)	282, 1418
StyD4I	CCNGG	9 cut(s)	109, 118, 437, 868, 929, 987, 1249, 1359, 1438
StyI	CCWWGG	1 cut(s)	1517
TaaI	ACNGT	2 cut(s)	171, 1480
TaiI	ACGT	7 cut(s)	24, 166, 199, 867, 1065, 1299, 1373
TaqI	TCGA	5 cut(s)	159, 166, 786, 843, 950
TasI	AATT	1 cut(s)	973
TauI	GCSGC	6 cut(s)	90, 315, 408, 682, 1148, 1351
TfiI	GAWTC	2 cut(s)	100, 609
Tru1I	TTAA	2 cut(s)	972, 1095
Tru9I	TTAA	2 cut(s)	972, 1095
TscAI	CASTG	2 cut(s)	455, 1216
TseFI	GTSAC	5 cut(s)	79, 415, 901, 1048, 1219
TseI	GCWGC	4 cut(s)	453, 561, 682, 833
Tsp45I	GTSAC	5 cut(s)	79, 415, 901, 1048, 1219
TspDTI	ATGAA	6 cut(s)	16, 17, 163, 503, 998, 1502
TspRI	CASTG	2 cut(s)	455, 1216
VpaK11BI	GGWCC	4 cut(s)	75, 113, 209, 296
XceI	RCATGY	1 cut(s)	226
XmaJI	CCTAGG	1 cut(s)	1517
XmiI	GTMKAC	2 cut(s)	166, 628
XspI	CTAG	2 cut(s)	1404, 1518

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.