Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11600 |
| fragaria_vesca | FvH4_6g28770 |
| malus_domestica | MD01G1175700.v1.1 MD07G1246400.v1.1 |
| prunus_persica | Prupe.7G219700_v2.0.a1 Prupe.7G219700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0133181 |
| rosa_laevigata | RLG00000019319 |
| rosa_multiflora | Rmu_sc0028113.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00111330 |
| rosa_rugosa | Rorug02G0310600 |
| rosa_samantha | Rh2AG363000 Rh2BG368500 Rh2CG346300 Rh2DG385600 |
| rosa_wichuraiana | Rw2G029500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 703 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1307 |
| AatII | GACGTC | 1 cut(s) | 1311 |
| Acc36I | ACCTGC | 1 cut(s) | 703 |
| Acc65I | GGTACC | 1 cut(s) | 1336 |
| AccB1I | GGYRCC | 2 cut(s) | 871, 1336 |
| AccBSI | CCGCTC | 1 cut(s) | 1349 |
| AccIII | TCCGGA | 1 cut(s) | 1444 |
| AclWI | GGATC | 7 cut(s) | 136, 451, 464, 1229, 1242, 1247, 1260 |
| AcoI | YGGCCR | 2 cut(s) | 122, 432 |
| AcuI | CTGAAG | 2 cut(s) | 199, 325 |
| AcyI | GRCGYC | 1 cut(s) | 1308 |
| AfaI | GTAC | 3 cut(s) | 377, 1181, 1338 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 34, 131, 441, 466, 712, 922, 1507 |
| AgsI | TTSAA | 3 cut(s) | 794, 1073, 1429 |
| AjiI | CACGTC | 2 cut(s) | 538, 1303 |
| AjnI | CCWGG | 4 cut(s) | 106, 115, 434, 874 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 8, 40 |
| Alw21I | GWGCWC | 1 cut(s) | 886 |
| Alw26I | GTCTC | 3 cut(s) | 623, 1157, 1463 |
| AlwI | GGATC | 7 cut(s) | 136, 451, 464, 1229, 1242, 1247, 1260 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 549 |
| Ama87I | CYCGRG | 2 cut(s) | 296, 1271 |
| Aor13HI | TCCGGA | 1 cut(s) | 1444 |
| AoxI | GGCC | 7 cut(s) | 110, 122, 164, 277, 379, 432, 1509 |
| ApeKI | GCWGC | 5 cut(s) | 509, 567, 839, 1151, 1402 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 267, 299, 842, 874 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1110 |
| Asp718I | GGTACC | 1 cut(s) | 1336 |
| AspA2I | CCTAGG | 1 cut(s) | 1523 |
| AspLEI | GCGC | 6 cut(s) | 66, 359, 393, 402, 839, 956 |
| AspS9I | GGNCC | 7 cut(s) | 16, 110, 165, 206, 293, 380, 1317 |
| AsuC2I | CCSGG | 7 cut(s) | 431, 674, 940, 1190, 1257, 1315, 1367 |
| AvaI | CYCGRG | 2 cut(s) | 296, 1271 |
| AvaII | GGWCC | 4 cut(s) | 16, 206, 293, 1317 |
| AvrII | CCTAGG | 1 cut(s) | 1523 |
| BaeGI | GKGCMC | 1 cut(s) | 1385 |
| BalI | TGGCCA | 1 cut(s) | 124 |
| BamHI | GGATCC | 3 cut(s) | 456, 1234, 1252 |
| BanI | GGYRCC | 2 cut(s) | 871, 1336 |
| BanII | GRGCYC | 4 cut(s) | 42, 830, 886, 976 |
| BauI | CACGAG | 1 cut(s) | 41 |
| Bbv12I | GWGCWC | 1 cut(s) | 886 |
| BbvCI | CCTCAGC | 1 cut(s) | 734 |
| BbvI | GCAGC | 5 cut(s) | 496, 579, 826, 1138, 1389 |
| BccI | CCATC | 8 cut(s) | 218, 335, 368, 569, 806, 1327, 1408, 1547 |
| BceAI | ACGGC | 2 cut(s) | 394, 538 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 491, 525 |
| BciT130I | CCWGG | 4 cut(s) | 108, 117, 436, 876 |
| BciVI | GTATCC | 1 cut(s) | 940 |
| BclI | TGATCA | 1 cut(s) | 423 |
| BcnI | CCSGG | 7 cut(s) | 431, 674, 940, 1190, 1257, 1315, 1367 |
| BcoDI | GTCTC | 3 cut(s) | 623, 1157, 1463 |
| BfaI | CTAG | 2 cut(s) | 1172, 1524 |
| BfmI | CTRYAG | 2 cut(s) | 550, 565 |
| BfoI | RGCGCY | 3 cut(s) | 67, 840, 957 |
| BfuAI | ACCTGC | 1 cut(s) | 703 |
| BfuI | GTATCC | 1 cut(s) | 940 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 109, 121, 834 |
| BisI | GCNGC | 9 cut(s) | 113, 310, 507, 510, 526, 568, 840, 1152, 1403 |
| BlnI | CCTAGG | 1 cut(s) | 1523 |
| BlpI | GCTNAGC | 1 cut(s) | 885 |
| BlsI | GCNGC | 9 cut(s) | 114, 311, 508, 511, 527, 569, 841, 1153, 1404 |
| Bme18I | GGWCC | 4 cut(s) | 16, 206, 293, 1317 |
| BmeT110I | CYCGRG | 2 cut(s) | 296, 1271 |
| BmgBI | CACGTC | 2 cut(s) | 538, 1303 |
| BmgT120I | GGNCC | 7 cut(s) | 16, 110, 165, 206, 293, 380, 1317 |
| BmsI | GCATC | 3 cut(s) | 579, 1186, 1438 |
| BpmI | CTGGAG | 3 cut(s) | 140, 887, 986 |
| Bpu10I | CCTNAGC | 2 cut(s) | 726, 734 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 885 |
| BpuEI | CTTGAG | 1 cut(s) | 1490 |
| BpuMI | CCSGG | 7 cut(s) | 431, 674, 940, 1190, 1257, 1315, 1367 |
| BsaAI | YACGTR | 1 cut(s) | 194 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1239 |
| BsaHI | GRCGYC | 1 cut(s) | 1308 |
| BsaI | GGTCTC | 1 cut(s) | 623 |
| BsaJI | CCNNGG | 8 cut(s) | 106, 107, 116, 501, 606, 831, 1256, 1523 |
| BsaWI | WCCGGW | 1 cut(s) | 1444 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 654, 684 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 34, 131, 441, 466, 712, 922, 1507 |
| Bse118I | RCCGGY | 2 cut(s) | 80, 1438 |
| Bse1I | ACTGG | 2 cut(s) | 74, 125 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1239 |
| BseAI | TCCGGA | 1 cut(s) | 1444 |
| BseBI | CCWGG | 4 cut(s) | 108, 117, 436, 876 |
| BseDI | CCNNGG | 8 cut(s) | 106, 107, 116, 501, 606, 831, 1256, 1523 |
| BseGI | GGATG | 8 cut(s) | 150, 267, 327, 570, 1201, 1419, 1453, 1535 |
| BseJI | GATNNNNATC | 1 cut(s) | 1239 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 34, 131, 441, 466, 712, 922, 1507 |
| BseMII | CTCAG | 4 cut(s) | 725, 899, 1221, 1458 |
| BseNI | ACTGG | 2 cut(s) | 74, 125 |
| BseRI | GAGGAG | 5 cut(s) | 326, 623, 751, 754, 1064 |
| BseSI | GKGCMC | 1 cut(s) | 1385 |
| BseXI | GCAGC | 5 cut(s) | 496, 579, 826, 1138, 1389 |
| BseYI | CCCAGC | 1 cut(s) | 465 |
| BsgI | GTGCAG | 2 cut(s) | 469, 1439 |
| BshFI | GGCC | 7 cut(s) | 112, 124, 166, 279, 381, 434, 1511 |
| BshNI | GGYRCC | 2 cut(s) | 871, 1336 |
| BsiHKAI | GWGCWC | 1 cut(s) | 886 |
| BsiHKCI | CYCGRG | 2 cut(s) | 296, 1271 |
| BslFI | GGGAC | 5 cut(s) | 192, 279, 955, 1172, 1330 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 34, 131, 441, 466, 712, 922, 1507 |
| BsmAI | GTCTC | 3 cut(s) | 623, 1157, 1463 |
| BsmBI | CGTCTC | 1 cut(s) | 1157 |
| BsmFI | GGGAC | 5 cut(s) | 192, 279, 955, 1172, 1330 |
| BsnI | GGCC | 7 cut(s) | 112, 124, 166, 279, 381, 434, 1511 |
| Bso31I | GGTCTC | 1 cut(s) | 623 |
| BsoBI | CYCGRG | 2 cut(s) | 296, 1271 |
| Bsp1286I | GDGCHC | 5 cut(s) | 42, 830, 886, 976, 1385 |
| Bsp13I | TCCGGA | 1 cut(s) | 1444 |
| Bsp143I | GATC | 6 cut(s) | 141, 262, 423, 456, 1234, 1252 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 885 |
| BspANI | GGCC | 7 cut(s) | 112, 124, 166, 279, 381, 434, 1511 |
| BspCNI | CTCAG | 4 cut(s) | 726, 898, 1222, 1459 |
| BspEI | TCCGGA | 1 cut(s) | 1444 |
| BspMAI | CTGCAG | 2 cut(s) | 554, 569 |
| BspMI | ACCTGC | 1 cut(s) | 703 |
| BspPI | GGATC | 7 cut(s) | 136, 451, 464, 1229, 1242, 1247, 1260 |
| BspQI | GCTCTTC | 2 cut(s) | 874, 897 |
| BspT107I | GGYRCC | 2 cut(s) | 871, 1336 |
| BspTNI | GGTCTC | 1 cut(s) | 623 |
| BsrBI | CCGCTC | 1 cut(s) | 1349 |
| BsrFI | RCCGGY | 2 cut(s) | 80, 1438 |
| BsrI | ACTGG | 2 cut(s) | 74, 125 |
| BssAI | RCCGGY | 2 cut(s) | 80, 1438 |
| BssECI | CCNNGG | 8 cut(s) | 106, 107, 116, 501, 606, 831, 1256, 1523 |
| BssMI | GATC | 6 cut(s) | 141, 262, 423, 456, 1234, 1252 |
| BssNI | GRCGYC | 1 cut(s) | 1308 |
| BssSI | CACGAG | 1 cut(s) | 41 |
| BssT1I | CCWWGG | 2 cut(s) | 831, 1523 |
| Bst2BI | CACGAG | 1 cut(s) | 41 |
| Bst2UI | CCWGG | 4 cut(s) | 108, 117, 436, 876 |
| Bst4CI | ACNGT | 5 cut(s) | 634, 1037, 1168, 1186, 1486 |
| Bst6I | CTCTTC | 3 cut(s) | 344, 874, 897 |
| BstACI | GRCGYC | 1 cut(s) | 1308 |
| BstBAI | YACGTR | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 8 cut(s) | 221, 307, 554, 710, 1351, 1355, 1407, 1422 |
| BstDEI | CTNAG | 5 cut(s) | 726, 734, 885, 1230, 1467 |
| BstEII | GGTNACC | 1 cut(s) | 76 |
| BstF5I | GGATG | 8 cut(s) | 150, 267, 327, 570, 1201, 1419, 1453, 1535 |
| BstH2I | RGCGCY | 3 cut(s) | 67, 840, 957 |
| BstHHI | GCGC | 6 cut(s) | 66, 359, 393, 402, 839, 956 |
| BstKTI | GATC | 6 cut(s) | 144, 265, 426, 459, 1237, 1255 |
| BstMAI | GTCTC | 3 cut(s) | 623, 1157, 1463 |
| BstMBI | GATC | 6 cut(s) | 141, 262, 423, 456, 1234, 1252 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 61, 109, 121, 229, 397, 399, 834, 871, 1123 |
| BstNI | CCWGG | 4 cut(s) | 108, 117, 436, 876 |
| BstNSI | RCATGY | 2 cut(s) | 223, 1394 |
| BstPI | GGTNACC | 1 cut(s) | 76 |
| BstSFI | CTRYAG | 2 cut(s) | 550, 565 |
| BstSLI | GKGCMC | 1 cut(s) | 1385 |
| BstV1I | GCAGC | 5 cut(s) | 496, 579, 826, 1138, 1389 |
| BstX2I | RGATCY | 3 cut(s) | 456, 1234, 1252 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 964 |
| BstYI | RGATCY | 3 cut(s) | 456, 1234, 1252 |
| BsuI | GTATCC | 1 cut(s) | 940 |
| BsuRI | GGCC | 7 cut(s) | 112, 124, 166, 279, 381, 434, 1511 |
| BtrI | CACGTC | 2 cut(s) | 538, 1303 |
| BtsCI | GGATG | 8 cut(s) | 150, 267, 327, 570, 1201, 1419, 1453, 1535 |
| BtsI | GCAGTG | 2 cut(s) | 452, 1215 |
| BtsIMutI | CAGTG | 6 cut(s) | 132, 349, 452, 1215, 1227, 1482 |
| BveI | ACCTGC | 1 cut(s) | 703 |
| Cac8I | GCNNGC | 8 cut(s) | 221, 307, 554, 710, 1351, 1355, 1407, 1422 |
| CaiI | CAGNNNCTG | 1 cut(s) | 549 |
| CfoI | GCGC | 6 cut(s) | 66, 359, 393, 402, 839, 956 |
| Cfr10I | RCCGGY | 2 cut(s) | 80, 1438 |
| Cfr13I | GGNCC | 7 cut(s) | 16, 110, 165, 206, 293, 380, 1317 |
| CseI | GACGC | 1 cut(s) | 970 |
| Csp6I | GTAC | 3 cut(s) | 376, 1180, 1337 |
| CviAII | CATG | 3 cut(s) | 220, 1221, 1391 |
| CviQI | GTAC | 3 cut(s) | 376, 1180, 1337 |
| DdeI | CTNAG | 5 cut(s) | 726, 734, 885, 1230, 1467 |
| DpnI | GATC | 6 cut(s) | 143, 264, 425, 458, 1236, 1254 |
| DpnII | GATC | 6 cut(s) | 141, 262, 423, 456, 1234, 1252 |
| DraI | TTTAAA | 1 cut(s) | 639 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1307 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1307 |
| EaeI | YGGCCR | 2 cut(s) | 122, 432 |
| Eam1104I | CTCTTC | 3 cut(s) | 344, 874, 897 |
| EarI | CTCTTC | 3 cut(s) | 344, 874, 897 |
| EciI | GGCGGA | 4 cut(s) | 99, 320, 1208, 1372 |
| Ecl136II | GAGCTC | 1 cut(s) | 884 |
| Eco130I | CCWWGG | 2 cut(s) | 831, 1523 |
| Eco147I | AGGCCT | 1 cut(s) | 279 |
| Eco24I | GRGCYC | 4 cut(s) | 42, 830, 886, 976 |
| Eco31I | GGTCTC | 1 cut(s) | 623 |
| Eco47I | GGWCC | 4 cut(s) | 16, 206, 293, 1317 |
| Eco53kI | GAGCTC | 1 cut(s) | 884 |
| Eco57I | CTGAAG | 2 cut(s) | 199, 325 |
| Eco88I | CYCGRG | 2 cut(s) | 296, 1271 |
| Eco91I | GGTNACC | 1 cut(s) | 76 |
| EcoICRI | GAGCTC | 1 cut(s) | 884 |
| EcoO109I | RGGNCCY | 2 cut(s) | 165, 293 |
| EcoO65I | GGTNACC | 1 cut(s) | 76 |
| EcoRII | CCWGG | 4 cut(s) | 106, 115, 434, 874 |
| EcoT14I | CCWWGG | 2 cut(s) | 831, 1523 |
| EcoT38I | GRGCYC | 4 cut(s) | 42, 830, 886, 976 |
| ErhI | CCWWGG | 2 cut(s) | 831, 1523 |
| Esp3I | CGTCTC | 1 cut(s) | 1157 |
| FaeI | CATG | 3 cut(s) | 223, 1224, 1394 |
| FaqI | GGGAC | 5 cut(s) | 192, 279, 955, 1172, 1330 |
| FatI | CATG | 3 cut(s) | 219, 1220, 1390 |
| FauI | CCCGC | 3 cut(s) | 322, 1131, 1342 |
| FauNDI | CATATG | 2 cut(s) | 483, 578 |
| FbaI | TGATCA | 1 cut(s) | 423 |
| Fnu4HI | GCNGC | 9 cut(s) | 113, 310, 507, 510, 526, 568, 840, 1152, 1403 |
| FokI | GGATG | 8 cut(s) | 137, 254, 314, 557, 1208, 1426, 1460, 1522 |
| FriOI | GRGCYC | 4 cut(s) | 42, 830, 886, 976 |
| Fsp4HI | GCNGC | 9 cut(s) | 113, 310, 507, 510, 526, 568, 840, 1152, 1403 |
| FspBI | CTAG | 2 cut(s) | 1172, 1524 |
| GlaI | GCGC | 6 cut(s) | 65, 358, 392, 401, 838, 955 |
| GluI | GCNGC | 9 cut(s) | 113, 310, 507, 510, 526, 568, 840, 1152, 1403 |
| GsaI | CCCAGC | 1 cut(s) | 469 |
| GsuI | CTGGAG | 3 cut(s) | 140, 887, 986 |
| HaeII | RGCGCY | 3 cut(s) | 67, 840, 957 |
| HaeIII | GGCC | 7 cut(s) | 112, 124, 166, 279, 381, 434, 1511 |
| HgaI | GACGC | 1 cut(s) | 970 |
| HhaI | GCGC | 6 cut(s) | 66, 359, 393, 402, 839, 956 |
| Hin1I | GRCGYC | 1 cut(s) | 1308 |
| Hin1II | CATG | 3 cut(s) | 223, 1224, 1394 |
| Hin6I | GCGC | 6 cut(s) | 64, 357, 391, 400, 837, 954 |
| HinP1I | GCGC | 6 cut(s) | 64, 357, 391, 400, 837, 954 |
| HincII | GTYRAC | 2 cut(s) | 1033, 1300 |
| HindII | GTYRAC | 2 cut(s) | 1033, 1300 |
| HindIII | AAGCTT | 1 cut(s) | 1013 |
| HinfI | GANTC | 4 cut(s) | 97, 320, 851, 1240 |
| Hpy166II | GTNNAC | 6 cut(s) | 535, 1033, 1182, 1300, 1306, 1396 |
| Hpy188I | TCNGA | 8 cut(s) | 262, 461, 502, 925, 1239, 1268, 1413, 1550 |
| Hpy188III | TCNNGA | 3 cut(s) | 286, 296, 1445 |
| Hpy8I | GTNNAC | 6 cut(s) | 535, 1033, 1182, 1300, 1306, 1396 |
| Hpy99I | CGWCG | 2 cut(s) | 964, 1295 |
| HpyAV | CCTTC | 4 cut(s) | 178, 269, 1039, 1153 |
| HpyCH4III | ACNGT | 5 cut(s) | 634, 1037, 1168, 1186, 1486 |
| HpyCH4IV | ACGT | 6 cut(s) | 193, 537, 645, 1068, 1302, 1308 |
| HpyCH4V | TGCA | 9 cut(s) | 197, 223, 450, 552, 567, 1199, 1220, 1390, 1420 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 61, 109, 121, 229, 397, 399, 834, 871, 1123 |
| HpyF3I | CTNAG | 5 cut(s) | 726, 734, 885, 1230, 1467 |
| HpySE526I | ACGT | 6 cut(s) | 193, 537, 645, 1068, 1302, 1308 |
| Hsp92I | GRCGYC | 1 cut(s) | 1308 |
| Hsp92II | CATG | 3 cut(s) | 223, 1224, 1394 |
| HspAI | GCGC | 6 cut(s) | 64, 357, 391, 400, 837, 954 |
| Kpn2I | TCCGGA | 1 cut(s) | 1444 |
| KpnI | GGTACC | 1 cut(s) | 1340 |
| Ksp22I | TGATCA | 1 cut(s) | 423 |
| Kzo9I | GATC | 6 cut(s) | 141, 262, 423, 456, 1234, 1252 |
| LguI | GCTCTTC | 2 cut(s) | 874, 897 |
| LmnI | GCTCC | 5 cut(s) | 263, 675, 730, 984, 1346 |
| Lsp1109I | GCAGC | 5 cut(s) | 496, 579, 826, 1138, 1389 |
| LweI | GCATC | 3 cut(s) | 579, 1186, 1438 |
| MaeI | CTAG | 2 cut(s) | 1172, 1524 |
| MaeII | ACGT | 6 cut(s) | 193, 537, 645, 1068, 1302, 1308 |
| MaeIII | GTNAC | 9 cut(s) | 76, 250, 412, 910, 1054, 1064, 1143, 1225, 1309 |
| MalI | GATC | 6 cut(s) | 143, 264, 425, 458, 1236, 1254 |
| MbiI | CCGCTC | 1 cut(s) | 1349 |
| MboI | GATC | 6 cut(s) | 141, 262, 423, 456, 1234, 1252 |
| MboII | GAAGA | 6 cut(s) | 205, 331, 891, 914, 1342, 1507 |
| MflI | RGATCY | 3 cut(s) | 456, 1234, 1252 |
| MhlI | GDGCHC | 5 cut(s) | 42, 830, 886, 976, 1385 |
| MlsI | TGGCCA | 1 cut(s) | 124 |
| MluNI | TGGCCA | 1 cut(s) | 124 |
| MlyI | GAGTC | 2 cut(s) | 314, 845 |
| MmeI | TCCRAC | 3 cut(s) | 434, 1030, 1291 |
| Mox20I | TGGCCA | 1 cut(s) | 124 |
| MroI | TCCGGA | 1 cut(s) | 1444 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1110 |
| MscI | TGGCCA | 1 cut(s) | 124 |
| MseI | TTAA | 2 cut(s) | 638, 1101 |
| MslI | CAYNNNNRTG | 1 cut(s) | 224 |
| Msp20I | TGGCCA | 1 cut(s) | 124 |
| MspA1I | CMGCKG | 2 cut(s) | 317, 889 |
| MvaI | CCWGG | 4 cut(s) | 108, 117, 436, 876 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 61, 109, 121, 229, 397, 399, 834, 871, 1123 |
| NciI | CCSGG | 7 cut(s) | 431, 674, 940, 1190, 1257, 1315, 1367 |
| NdeI | CATATG | 2 cut(s) | 483, 578 |
| NdeII | GATC | 6 cut(s) | 141, 262, 423, 456, 1234, 1252 |
| NlaIII | CATG | 3 cut(s) | 223, 1224, 1394 |
| NmeAIII | GCCGAG | 1 cut(s) | 1152 |
| NmuCI | GTSAC | 8 cut(s) | 76, 412, 910, 1054, 1064, 1143, 1225, 1309 |
| NspI | RCATGY | 2 cut(s) | 223, 1394 |
| PaeI | GCATGC | 1 cut(s) | 223 |
| PaqCI | CACCTGC | 1 cut(s) | 703 |
| PasI | CCCWGGG | 1 cut(s) | 107 |
| PceI | AGGCCT | 1 cut(s) | 279 |
| PciSI | GCTCTTC | 2 cut(s) | 874, 897 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 279, 956, 1299 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1110 |
| PfeI | GAWTC | 2 cut(s) | 97, 1240 |
| PfoI | TCCNGGA | 1 cut(s) | 672 |
| PkrI | GCNGC | 9 cut(s) | 114, 311, 508, 511, 527, 569, 841, 1153, 1404 |
| PleI | GAGTC | 2 cut(s) | 314, 845 |
| PpsI | GAGTC | 2 cut(s) | 314, 845 |
| Ppu21I | YACGTR | 1 cut(s) | 194 |
| PpuMI | RGGWCCY | 1 cut(s) | 293 |
| Psp124BI | GAGCTC | 1 cut(s) | 886 |
| Psp5II | RGGWCCY | 1 cut(s) | 293 |
| Psp6I | CCWGG | 4 cut(s) | 106, 115, 434, 874 |
| PspEI | GGTNACC | 1 cut(s) | 76 |
| PspFI | CCCAGC | 1 cut(s) | 465 |
| PspGI | CCWGG | 4 cut(s) | 106, 115, 434, 874 |
| PspPI | GGNCC | 7 cut(s) | 16, 110, 165, 206, 293, 380, 1317 |
| PspPPI | RGGWCCY | 1 cut(s) | 293 |
| PstI | CTGCAG | 2 cut(s) | 554, 569 |
| PstNI | CAGNNNCTG | 1 cut(s) | 549 |
| PsuI | RGATCY | 3 cut(s) | 456, 1234, 1252 |
| RsaI | GTAC | 3 cut(s) | 377, 1181, 1338 |
| RsaNI | GTAC | 3 cut(s) | 376, 1180, 1337 |
| RseI | CAYNNNNRTG | 1 cut(s) | 224 |
| SacI | GAGCTC | 1 cut(s) | 886 |
| SapI | GCTCTTC | 2 cut(s) | 874, 897 |
| SaqAI | TTAA | 2 cut(s) | 638, 1101 |
| SatI | GCNGC | 9 cut(s) | 113, 310, 507, 510, 526, 568, 840, 1152, 1403 |
| Sau3AI | GATC | 6 cut(s) | 141, 262, 423, 456, 1234, 1252 |
| Sau96I | GGNCC | 7 cut(s) | 16, 110, 165, 206, 293, 380, 1317 |
| SchI | GAGTC | 2 cut(s) | 314, 845 |
| SduI | GDGCHC | 5 cut(s) | 42, 830, 886, 976, 1385 |
| SfaNI | GCATC | 3 cut(s) | 579, 1186, 1438 |
| SfcI | CTRYAG | 2 cut(s) | 550, 565 |
| SinI | GGWCC | 4 cut(s) | 16, 206, 293, 1317 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 224 |
| SmlI | CTYRAG | 1 cut(s) | 1505 |
| SmoI | CTYRAG | 1 cut(s) | 1505 |
| SphI | GCATGC | 1 cut(s) | 223 |
| SseBI | AGGCCT | 1 cut(s) | 279 |
| SspMI | CTAG | 2 cut(s) | 1172, 1524 |
| SstI | GAGCTC | 1 cut(s) | 886 |
| StuI | AGGCCT | 1 cut(s) | 279 |
| StyI | CCWWGG | 2 cut(s) | 831, 1523 |
| TaaI | ACNGT | 5 cut(s) | 634, 1037, 1168, 1186, 1486 |
| TaiI | ACGT | 6 cut(s) | 196, 540, 648, 1071, 1305, 1311 |
| TauI | GCSGC | 4 cut(s) | 115, 312, 509, 528 |
| TfiI | GAWTC | 2 cut(s) | 97, 1240 |
| Tru1I | TTAA | 2 cut(s) | 638, 1101 |
| Tru9I | TTAA | 2 cut(s) | 638, 1101 |
| TscAI | CASTG | 6 cut(s) | 132, 349, 452, 1222, 1234, 1489 |
| TseFI | GTSAC | 8 cut(s) | 76, 412, 910, 1054, 1064, 1143, 1225, 1309 |
| TseI | GCWGC | 5 cut(s) | 509, 567, 839, 1151, 1402 |
| Tsp45I | GTSAC | 8 cut(s) | 76, 412, 910, 1054, 1064, 1143, 1225, 1309 |
| TspDTI | ATGAA | 3 cut(s) | 160, 1007, 1508 |
| TspGWI | ACGGA | 4 cut(s) | 106, 173, 687, 959 |
| TspRI | CASTG | 6 cut(s) | 132, 349, 452, 1222, 1234, 1489 |
| VpaK11BI | GGWCC | 4 cut(s) | 16, 206, 293, 1317 |
| XceI | RCATGY | 2 cut(s) | 223, 1394 |
| XmaJI | CCTAGG | 1 cut(s) | 1523 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1110 |
| XspI | CTAG | 2 cut(s) | 1172, 1524 |
| ZraI | GACGTC | 1 cut(s) | 1309 |