Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0011214

Physical Location & Seq

Genomic Coordinates Forward (+)

35757203 .. 35760130

Gene Structure 2928 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1297800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGATGATGGTCCATCATGATAATCACCGCCGTCCATTTCCACCATCAGACACAACACCTGCTCCTGATGCTGGTGGTCCCACATGTAACAGGCCTCCTCCTACATACGACGATGTCGTTGCAGCTAGTACTGGTACTGGTTCTTCGAGTGGCGGTGGTGCAGTTTTAAGAAACTTGCAGCCTTTTGACATTCGAACACACACTTGTTCTGCAGGAGGGATGACGACGTCGTTTGGATTTCCTTTCACAAATGCACAGTGGAAGGAGCTTGAGAGACAAGCTATGATATACAAATACATGGTGGCTTCTCTCCCTGTTCCCCGTGATCTCCTCTTTCCCCTCACTACAACTCCCCCTGGAACAACAGCTGCTTCCCAATCTCCCTCGGGAGGTACGTTCAATCTCCGGCTATCGAACAGCACAGATCCGGAGCCGGGGCGGTGCAAGAGAACAGACGGGAAAAAATGGCGGTGCTCGAGAGACGTAGCGCCGGACCAGAAGTACTGCGAGCGTCACATGCACAGAGGCCGACCCCGTTCAAGAAAGCATGTGGAAGTTCATGCCACCGCCGCAAGCAAGAGGGTTCGCCACGACATCAATCTTGCTCCTCCTCTTCCGACAGTATCTCAGGAAACCGTGTCGATTTCGAACCCTGGAAATAGAATCAACAAAAATGTCTGCTCATCTCGGTTTATGGGATCTAATCTTCATCCGTACGGTCCGTCTCCAGTGTTTCCCGAGAGGGATGGTGCAAAGTTTGCATCTTTCGAATCTATGAACTCTGCTTCAGCAAACAGAGAACCCAGGAACTTGGACTGGCTGATGATGAAAGGAGAACCTGTATCTGATGCACAATGGCACCAACTGATGCATAGCAAAACAGAGCTGAGCACCAAGATCCCGTATTTCGACCCGAATTCCTCTGTTTTCAGCAATCGTTCCGAAGAGGAGTCTTTCTTGAATCTGAATTCGTATGCGAATTTCAACGCCGGAGAGGATCAGCAAGACTGCGGCGAGTGCAATTTGTTTCTCAATCCGGATGTGGCTCCTTTAGAAAGTCCCCTGCTTGAAGAAACCCCAAGATATTTCATTGATGCATGGTCTAAAGCAGTGATGGATGAAGCCAACCCTGTTAACAACAATGACAACAGCTCAGCTCCGTCGAGCGGGCAGCTCTCCCCTTCTTCGCTTACCCTATCGATGGGCGGGTACAACACCATCAGTGAGGAAATGGGTCAGACTCAGATGAGCTTAGGAACCAGTGGAAATGGGATGATGCCGAGGGTTTCGACGTGGCCTGCTTCAGCACCTGGCGGCCCATTGGCTGAGGTCCTTAAACCGACCACTAGCGCGGCCTCAAATCCTTCGTCTCCGGTCACAACCGGTACTACTACTAATGGAGAATTGGGCAGTCCATTGGCGGTGTCACCGCCGTCGGGAGTTCTTCAGAAAAAGTTTGTTTCACCGTCTGATAGCAGTGGTAATAGCAGCCCAACCCTTGCAAGTTCAAGGGCCAAGCCAGAGATTGTCTCTCTGTGGTTGAATCAGAGCAAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0010114 GO:0010218 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0080167 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QLQ WRC

Protein Analysis

520

Amino Acids

55.96

Weight (kDa)

6.87

Isoelectric Point (pI)

59.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QLQ	PF08880	81 - 114	8.2e-14	QLQ
WRC	PF08879	143 - 185	5.6e-21	WRC

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53660
fragaria_vesca	FvH4_7g32780 FvH4_7g32780 FvH4_7g32780
malus_domestica	MD07G1297800.v1.1
prunus_persica	Prupe.2G317500_v2.0.a1 Prupe.2G317500_v2.0.a1 Prupe.2G317500_v2.0.a1 Prupe.2G317500_v2.0.a1
pyrus_communis	pycom07g27020
rosa_chinensis	RchiOBHm_Chr1g0382681
rosa_laevigata	RLG00000026165
rosa_roxburghii	Rroxscaffold_4G00277950
rosa_rugosa	Rorug01G0435400
rosa_samantha	Rh1AG460600 Rh1BG417400 Rh1CG431000 Rh1DG449600 Rh2CG431600
rosa_wichuraiana	Rw1G041100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	67
AatII	GACGTC	1 cut(s)	230
Acc36I	ACCTGC	1 cut(s)	67
AccB1I	GGYRCC	1 cut(s)	858
AccBSI	CCGCTC	1 cut(s)	1167
AccII	CGCG	1 cut(s)	1352
AccIII	TCCGGA	2 cut(s)	427, 1036
AclWI	GGATC	4 cut(s)	419, 706, 892, 1005
AcsI	RAATTY	3 cut(s)	916, 967, 979
AcuI	CTGAAG	3 cut(s)	771, 1287, 1430
AcyI	GRCGYC	1 cut(s)	227
AfaI	GTAC	7 cut(s)	130, 136, 394, 503, 716, 1211, 1387
AfiI	CCNNNNNNNGG	6 cut(s)	71, 389, 434, 1166, 1201, 1436
AflIII	ACRYGT	1 cut(s)	83
AgeI	ACCGGT	1 cut(s)	1382
AgsI	TTSAA	7 cut(s)	400, 540, 961, 985, 1070, 1509, 1543
AjiI	CACGTC	1 cut(s)	1293
AjnI	CCWGG	4 cut(s)	355, 652, 803, 1309
AluBI	AGCT	9 cut(s)	125, 268, 281, 368, 886, 1152, 1157, 1174, 1251
AluI	AGCT	9 cut(s)	125, 268, 281, 368, 886, 1152, 1157, 1174, 1251
Alw21I	GWGCWC	2 cut(s)	476, 893
Alw26I	GTCTC	5 cut(s)	268, 474, 729, 1374, 1534
AlwI	GGATC	4 cut(s)	419, 706, 892, 1005
AlwNI	CAGNNNCTG	1 cut(s)	1310
Ama87I	CYCGRG	3 cut(s)	385, 475, 737
Aor13HI	TCCGGA	2 cut(s)	427, 1036
AoxI	GGCC	6 cut(s)	92, 526, 1295, 1315, 1353, 1512
ApeKI	GCWGC	5 cut(s)	122, 178, 368, 1171, 1488
ApoI	RAATTY	3 cut(s)	916, 967, 979
ArsI	GACNNNNNNTTYG	2 cut(s)	1352, 1384
AsiGI	ACCGGT	1 cut(s)	1382
AspLEI	GCGC	2 cut(s)	490, 1352
AspS9I	GGNCC	7 cut(s)	10, 77, 493, 719, 1316, 1330, 1512
AsuC2I	CCSGG	1 cut(s)	435
AsuHPI	GGTGA	3 cut(s)	17, 1419, 1455
AsuII	TTCGAA	3 cut(s)	193, 647, 768
AvaI	CYCGRG	3 cut(s)	385, 475, 737
AvaII	GGWCC	5 cut(s)	10, 77, 493, 719, 1330
BanI	GGYRCC	1 cut(s)	858
BarI	GAAGNNNNNNTAC	2 cut(s)	127, 159
Bbv12I	GWGCWC	2 cut(s)	476, 893
BbvCI	CCTCAGC	1 cut(s)	1326
BbvI	GCAGC	5 cut(s)	134, 190, 355, 1183, 1500
BccI	CCATC	6 cut(s)	21, 52, 740, 1108, 1195, 1226
BceAI	ACGGC	2 cut(s)	15, 1417
BcgI	CGANNNNNNTGC	2 cut(s)	101, 135
BciT130I	CCWGG	4 cut(s)	357, 654, 805, 1311
BcnI	CCSGG	1 cut(s)	435
BcoDI	GTCTC	5 cut(s)	268, 474, 729, 1374, 1534
BfaI	CTAG	2 cut(s)	126, 1347
BfmI	CTRYAG	1 cut(s)	210
BfoI	RGCGCY	1 cut(s)	491
BfuAI	ACCTGC	1 cut(s)	67
BisI	GCNGC	9 cut(s)	123, 179, 369, 570, 1012, 1172, 1315, 1353, 1489
BlpI	GCTNAGC	2 cut(s)	887, 1153
BlsI	GCNGC	9 cut(s)	124, 180, 370, 571, 1013, 1173, 1316, 1354, 1490
BmcAI	AGTACT	2 cut(s)	130, 503
Bme1390I	CCNGG	5 cut(s)	357, 435, 654, 805, 1311
Bme18I	GGWCC	5 cut(s)	10, 77, 493, 719, 1330
BmeT110I	CYCGRG	3 cut(s)	385, 475, 737
BmgBI	CACGTC	1 cut(s)	1293
BmgT120I	GGNCC	7 cut(s)	10, 77, 493, 719, 1316, 1330, 1512
BmiI	GGNNCC	5 cut(s)	79, 432, 860, 1047, 1258
BmrFI	CCNGG	5 cut(s)	357, 435, 654, 805, 1311
BmsI	GCATC	6 cut(s)	58, 770, 838, 858, 1084, 1266
BplI	GAGNNNNNCTC	2 cut(s)	1514, 1546
BpmI	CTGGAG	1 cut(s)	711
Bpu10I	CCTNAGC	2 cut(s)	1252, 1326
Bpu1102I	GCTNAGC	2 cut(s)	887, 1153
Bpu14I	TTCGAA	3 cut(s)	193, 647, 768
BpuEI	CTTGAG	1 cut(s)	290
BpuMI	CCSGG	1 cut(s)	435
Bsa29I	ATCGAT	1 cut(s)	1199
BsaHI	GRCGYC	1 cut(s)	227
BsaJI	CCNNGG	6 cut(s)	355, 384, 434, 652, 803, 1280
BsaWI	WCCGGW	4 cut(s)	427, 1036, 1372, 1382
BsaXI	ACNNNNNCTCC	6 cut(s)	46, 76, 334, 364, 825, 855
Bsc4I	CCNNNNNNNGG	6 cut(s)	71, 389, 434, 1166, 1201, 1436
Bse118I	RCCGGY	1 cut(s)	1382
Bse1I	ACTGG	5 cut(s)	136, 142, 728, 821, 1260
BseAI	TCCGGA	2 cut(s)	427, 1036
BseBI	CCWGG	4 cut(s)	357, 654, 805, 1311
BseCI	ATCGAT	1 cut(s)	1199
BseDI	CCNNGG	6 cut(s)	355, 384, 434, 652, 803, 1280
BseGI	GGATG	6 cut(s)	225, 709, 751, 1045, 1123, 1278
BseLI	CCNNNNNNNGG	6 cut(s)	71, 389, 434, 1166, 1201, 1436
BseMII	CTCAG	5 cut(s)	641, 878, 1167, 1256, 1317
BseNI	ACTGG	5 cut(s)	136, 142, 728, 821, 1260
BseRI	GAGGAG	5 cut(s)	87, 320, 597, 600, 962
BseXI	GCAGC	5 cut(s)	134, 190, 355, 1183, 1500
BsgI	GTGCAG	1 cut(s)	180
Bsh1236I	CGCG	1 cut(s)	1352
BshFI	GGCC	6 cut(s)	94, 528, 1297, 1317, 1355, 1514
BshNI	GGYRCC	1 cut(s)	858
BshTI	ACCGGT	1 cut(s)	1382
BshVI	ATCGAT	1 cut(s)	1199
BsiHKAI	GWGCWC	2 cut(s)	476, 893
BsiHKCI	CYCGRG	3 cut(s)	385, 475, 737
BsiSI	CCGG	8 cut(s)	406, 428, 434, 491, 990, 1037, 1373, 1383
BsiWI	CGTACG	1 cut(s)	714
BslFI	GGGAC	2 cut(s)	63, 1044
BslI	CCNNNNNNNGG	6 cut(s)	71, 389, 434, 1166, 1201, 1436
BsmAI	GTCTC	5 cut(s)	268, 474, 729, 1374, 1534
BsmBI	CGTCTC	3 cut(s)	474, 729, 1374
BsmFI	GGGAC	2 cut(s)	63, 1044
BsnI	GGCC	6 cut(s)	94, 528, 1297, 1317, 1355, 1514
BsoBI	CYCGRG	3 cut(s)	385, 475, 737
Bsp119I	TTCGAA	3 cut(s)	193, 647, 768
Bsp1286I	GDGCHC	2 cut(s)	476, 893
Bsp13I	TCCGGA	2 cut(s)	427, 1036
Bsp143I	GATC	5 cut(s)	325, 424, 698, 897, 997
Bsp1720I	GCTNAGC	2 cut(s)	887, 1153
BspANI	GGCC	6 cut(s)	94, 528, 1297, 1317, 1355, 1514
BspCNI	CTCAG	5 cut(s)	640, 879, 1166, 1255, 1318
BspDI	ATCGAT	1 cut(s)	1199
BspEI	TCCGGA	2 cut(s)	427, 1036
BspFNI	CGCG	1 cut(s)	1352
BspHI	TCATGA	1 cut(s)	16
BspLI	GGNNCC	5 cut(s)	79, 432, 860, 1047, 1258
BspMAI	CTGCAG	1 cut(s)	214
BspMI	ACCTGC	1 cut(s)	67
BspPI	GGATC	4 cut(s)	419, 706, 892, 1005
BspT104I	TTCGAA	3 cut(s)	193, 647, 768
BspT107I	GGYRCC	1 cut(s)	858
BsrBI	CCGCTC	1 cut(s)	1167
BsrFI	RCCGGY	1 cut(s)	1382
BsrI	ACTGG	5 cut(s)	136, 142, 728, 821, 1260
BssAI	RCCGGY	1 cut(s)	1382
BssECI	CCNNGG	6 cut(s)	355, 384, 434, 652, 803, 1280
BssMI	GATC	5 cut(s)	325, 424, 698, 897, 997
BssNI	GRCGYC	1 cut(s)	227
Bst2UI	CCWGG	4 cut(s)	357, 654, 805, 1311
Bst4CI	ACNGT	5 cut(s)	258, 622, 637, 719, 1467
Bst6I	CTCTTC	2 cut(s)	618, 939
BstACI	GRCGYC	1 cut(s)	227
BstAPI	GCANNNNNTGC	1 cut(s)	758
BstBI	TTCGAA	3 cut(s)	193, 647, 768
BstC8I	GCNNGC	4 cut(s)	509, 574, 1169, 1299
BstDEI	CTNAG	6 cut(s)	627, 887, 1153, 1242, 1252, 1326
BstF5I	GGATG	6 cut(s)	225, 709, 751, 1045, 1123, 1278
BstFNI	CGCG	1 cut(s)	1352
BstH2I	RGCGCY	1 cut(s)	491
BstHHI	GCGC	2 cut(s)	490, 1352
BstKTI	GATC	5 cut(s)	328, 427, 701, 900, 1000
BstMAI	GTCTC	5 cut(s)	268, 474, 729, 1374, 1534
BstMBI	GATC	5 cut(s)	325, 424, 698, 897, 997
BstMWI	GCNNNNNNNGC	5 cut(s)	68, 517, 569, 758, 1017
BstNI	CCWGG	4 cut(s)	357, 654, 805, 1311
BstNSI	RCATGY	3 cut(s)	87, 520, 551
BstSCI	CCNGG	5 cut(s)	355, 433, 652, 803, 1309
BstSFI	CTRYAG	1 cut(s)	210
BstUI	CGCG	1 cut(s)	1352
BstV1I	GCAGC	5 cut(s)	134, 190, 355, 1183, 1500
BstX2I	RGATCY	3 cut(s)	424, 698, 897
BstXI	CCANNNNNNTGG	1 cut(s)	811
BstYI	RGATCY	3 cut(s)	424, 698, 897
Bsu15I	ATCGAT	1 cut(s)	1199
BsuRI	GGCC	6 cut(s)	94, 528, 1297, 1317, 1355, 1514
BsuTUI	ATCGAT	1 cut(s)	1199
BtrI	CACGTC	1 cut(s)	1293
BtsCI	GGATG	6 cut(s)	225, 709, 751, 1045, 1123, 1278
BtsI	GCAGTG	2 cut(s)	1116, 1483
BtsIMutI	CAGTG	6 cut(s)	263, 735, 1116, 1228, 1267, 1483
BveI	ACCTGC	1 cut(s)	67
Cac8I	GCNNGC	4 cut(s)	509, 574, 1169, 1299
CaiI	CAGNNNCTG	1 cut(s)	1310
CciI	TCATGA	1 cut(s)	16
CfoI	GCGC	2 cut(s)	490, 1352
Cfr10I	RCCGGY	1 cut(s)	1382
Cfr13I	GGNCC	7 cut(s)	10, 77, 493, 719, 1316, 1330, 1512
ClaI	ATCGAT	1 cut(s)	1199
CpoI	CGGWCCG	1 cut(s)	719
CseI	GACGC	1 cut(s)	500
Csp6I	GTAC	7 cut(s)	129, 135, 393, 502, 715, 1210, 1386
CspAI	ACCGGT	1 cut(s)	1382
CspI	CGGWCCG	1 cut(s)	719
CviAII	CATG	7 cut(s)	17, 84, 298, 517, 548, 560, 1098
CviQI	GTAC	7 cut(s)	129, 135, 393, 502, 715, 1210, 1386
DdeI	CTNAG	6 cut(s)	627, 887, 1153, 1242, 1252, 1326
DpnI	GATC	5 cut(s)	327, 426, 700, 899, 999
DpnII	GATC	5 cut(s)	325, 424, 698, 897, 997
Eam1104I	CTCTTC	2 cut(s)	618, 939
EarI	CTCTTC	2 cut(s)	618, 939
Eco147I	AGGCCT	1 cut(s)	94
Eco47I	GGWCC	5 cut(s)	10, 77, 493, 719, 1330
Eco57I	CTGAAG	3 cut(s)	771, 1287, 1430
Eco88I	CYCGRG	3 cut(s)	385, 475, 737
EcoO109I	RGGNCCY	1 cut(s)	1330
EcoRI	GAATTC	2 cut(s)	916, 967
EcoRII	CCWGG	4 cut(s)	355, 652, 803, 1309
EcoT22I	ATGCAT	2 cut(s)	873, 1099
Esp3I	CGTCTC	3 cut(s)	474, 729, 1374
FaeI	CATG	7 cut(s)	20, 87, 301, 520, 551, 563, 1101
FaqI	GGGAC	2 cut(s)	63, 1044
FatI	CATG	7 cut(s)	16, 83, 297, 516, 547, 559, 1097
FauI	CCCGC	2 cut(s)	1160, 1199
Fnu4HI	GCNGC	9 cut(s)	123, 179, 369, 570, 1012, 1172, 1315, 1353, 1489
FokI	GGATG	6 cut(s)	232, 696, 758, 1052, 1130, 1285
Fsp4HI	GCNGC	9 cut(s)	123, 179, 369, 570, 1012, 1172, 1315, 1353, 1489
FspBI	CTAG	2 cut(s)	126, 1347
GlaI	GCGC	2 cut(s)	489, 1351
GluI	GCNGC	9 cut(s)	123, 179, 369, 570, 1012, 1172, 1315, 1353, 1489
GsuI	CTGGAG	1 cut(s)	711
HaeII	RGCGCY	1 cut(s)	491
HaeIII	GGCC	6 cut(s)	94, 528, 1297, 1317, 1355, 1514
HapII	CCGG	8 cut(s)	406, 428, 434, 491, 990, 1037, 1373, 1383
HgaI	GACGC	1 cut(s)	500
HhaI	GCGC	2 cut(s)	490, 1352
Hin1I	GRCGYC	1 cut(s)	227
Hin1II	CATG	7 cut(s)	20, 87, 301, 520, 551, 563, 1101
Hin6I	GCGC	2 cut(s)	488, 1350
HinP1I	GCGC	2 cut(s)	488, 1350
HincII	GTYRAC	1 cut(s)	1135
HindII	GTYRAC	1 cut(s)	1135
HinfI	GANTC	6 cut(s)	663, 770, 950, 961, 1240, 1543
HpaI	GTTAAC	1 cut(s)	1135
HpaII	CCGG	8 cut(s)	406, 428, 434, 491, 990, 1037, 1373, 1383
HphI	GGTGA	3 cut(s)	17, 1419, 1455
Hpy166II	GTNNAC	1 cut(s)	1135
Hpy8I	GTNNAC	1 cut(s)	1135
Hpy99I	CGWCG	6 cut(s)	113, 229, 232, 1165, 1294, 1438
HpyAV	CCTTC	3 cut(s)	256, 1191, 1374
HpyCH4III	ACNGT	5 cut(s)	258, 622, 637, 719, 1467
HpyCH4IV	ACGT	4 cut(s)	227, 395, 483, 1292
HpyF10VI	GCNNNNNNNGC	5 cut(s)	68, 517, 569, 758, 1017
HpyF3I	CTNAG	6 cut(s)	627, 887, 1153, 1242, 1252, 1326
HpySE526I	ACGT	4 cut(s)	227, 395, 483, 1292
Hsp92I	GRCGYC	1 cut(s)	227
Hsp92II	CATG	7 cut(s)	20, 87, 301, 520, 551, 563, 1101
HspAI	GCGC	2 cut(s)	488, 1350
Kpn2I	TCCGGA	2 cut(s)	427, 1036
KspAI	GTTAAC	1 cut(s)	1135
Kzo9I	GATC	5 cut(s)	325, 424, 698, 897, 997
LmnI	GCTCC	6 cut(s)	67, 265, 430, 610, 1051, 1162
Lsp1109I	GCAGC	5 cut(s)	134, 190, 355, 1183, 1500
LweI	GCATC	6 cut(s)	58, 770, 838, 858, 1084, 1266
MaeI	CTAG	2 cut(s)	126, 1347
MaeII	ACGT	4 cut(s)	227, 395, 483, 1292
MaeIII	GTNAC	4 cut(s)	86, 512, 1375, 1425
MalI	GATC	5 cut(s)	327, 426, 700, 899, 999
MbiI	CCGCTC	1 cut(s)	1167
MboI	GATC	5 cut(s)	325, 424, 698, 897, 997
MboII	GAAGA	7 cut(s)	135, 605, 698, 956, 1082, 1176, 1436
MflI	RGATCY	3 cut(s)	424, 698, 897
MhlI	GDGCHC	2 cut(s)	476, 893
MluCI	AATT	5 cut(s)	916, 967, 979, 1021, 1403
MlyI	GAGTC	2 cut(s)	959, 1234
MmeI	TCCRAC	1 cut(s)	641
Mph1103I	ATGCAT	2 cut(s)	873, 1099
MroI	TCCGGA	2 cut(s)	427, 1036
MseI	TTAA	3 cut(s)	167, 1134, 1335
MspA1I	CMGCKG	1 cut(s)	368
MspI	CCGG	8 cut(s)	406, 428, 434, 491, 990, 1037, 1373, 1383
MspR9I	CCNGG	5 cut(s)	357, 435, 654, 805, 1311
MvaI	CCWGG	4 cut(s)	357, 654, 805, 1311
MvnI	CGCG	1 cut(s)	1352
MwoI	GCNNNNNNNGC	5 cut(s)	68, 517, 569, 758, 1017
NciI	CCSGG	1 cut(s)	435
NdeII	GATC	5 cut(s)	325, 424, 698, 897, 997
NlaIII	CATG	7 cut(s)	20, 87, 301, 520, 551, 563, 1101
NlaIV	GGNNCC	5 cut(s)	79, 432, 860, 1047, 1258
NmeAIII	GCCGAG	1 cut(s)	1305
NmuCI	GTSAC	3 cut(s)	512, 1375, 1425
NsiI	ATGCAT	2 cut(s)	873, 1099
NspI	RCATGY	3 cut(s)	87, 520, 551
NspV	TTCGAA	3 cut(s)	193, 647, 768
PaeR7I	CTCGAG	1 cut(s)	475
PagI	TCATGA	1 cut(s)	16
PaqCI	CACCTGC	1 cut(s)	67
PceI	AGGCCT	1 cut(s)	94
PciI	ACATGT	1 cut(s)	83
PcsI	WCGNNNNNNNCGW	2 cut(s)	114, 392
PfeI	GAWTC	4 cut(s)	663, 770, 961, 1543
Pfl23II	CGTACG	1 cut(s)	714
PflFI	GACNNNGTC	2 cut(s)	113, 226
PinAI	ACCGGT	1 cut(s)	1382
PkrI	GCNGC	9 cut(s)	124, 180, 370, 571, 1013, 1173, 1316, 1354, 1490
PleI	GAGTC	2 cut(s)	958, 1234
PpsI	GAGTC	2 cut(s)	958, 1234
PpuMI	RGGWCCY	1 cut(s)	1330
PscI	ACATGT	1 cut(s)	83
Psp5II	RGGWCCY	1 cut(s)	1330
Psp6I	CCWGG	4 cut(s)	355, 652, 803, 1309
PspGI	CCWGG	4 cut(s)	355, 652, 803, 1309
PspLI	CGTACG	1 cut(s)	714
PspN4I	GGNNCC	5 cut(s)	79, 432, 860, 1047, 1258
PspPI	GGNCC	7 cut(s)	10, 77, 493, 719, 1316, 1330, 1512
PspPPI	RGGWCCY	1 cut(s)	1330
PstI	CTGCAG	1 cut(s)	214
PstNI	CAGNNNCTG	1 cut(s)	1310
PsuI	RGATCY	3 cut(s)	424, 698, 897
PsyI	GACNNNGTC	2 cut(s)	113, 226
PvuII	CAGCTG	1 cut(s)	368
RsaI	GTAC	7 cut(s)	130, 136, 394, 503, 716, 1211, 1387
RsaNI	GTAC	7 cut(s)	129, 135, 393, 502, 715, 1210, 1386
Rsr2I	CGGWCCG	1 cut(s)	719
RsrII	CGGWCCG	1 cut(s)	719
SaqAI	TTAA	3 cut(s)	167, 1134, 1335
SatI	GCNGC	9 cut(s)	123, 179, 369, 570, 1012, 1172, 1315, 1353, 1489
Sau3AI	GATC	5 cut(s)	325, 424, 698, 897, 997
Sau96I	GGNCC	7 cut(s)	10, 77, 493, 719, 1316, 1330, 1512
ScaI	AGTACT	2 cut(s)	130, 503
SchI	GAGTC	2 cut(s)	959, 1234
ScrFI	CCNGG	5 cut(s)	357, 435, 654, 805, 1311
SduI	GDGCHC	2 cut(s)	476, 893
SfaNI	GCATC	6 cut(s)	58, 770, 838, 858, 1084, 1266
SfcI	CTRYAG	1 cut(s)	210
Sfr274I	CTCGAG	1 cut(s)	475
SfuI	TTCGAA	3 cut(s)	193, 647, 768
SinI	GGWCC	5 cut(s)	10, 77, 493, 719, 1330
SlaI	CTCGAG	1 cut(s)	475
SmlI	CTYRAG	2 cut(s)	269, 475
SmoI	CTYRAG	2 cut(s)	269, 475
Sse9I	AATT	5 cut(s)	916, 967, 979, 1021, 1403
SseBI	AGGCCT	1 cut(s)	94
SspMI	CTAG	2 cut(s)	126, 1347
StuI	AGGCCT	1 cut(s)	94
StyD4I	CCNGG	5 cut(s)	355, 433, 652, 803, 1309
TaaI	ACNGT	5 cut(s)	258, 622, 637, 719, 1467
TaiI	ACGT	4 cut(s)	230, 398, 486, 1295
TasI	AATT	5 cut(s)	916, 967, 979, 1021, 1403
TatI	WGTACW	2 cut(s)	128, 501
TauI	GCSGC	4 cut(s)	572, 1014, 1317, 1355
TfiI	GAWTC	4 cut(s)	663, 770, 961, 1543
Tru1I	TTAA	3 cut(s)	167, 1134, 1335
Tru9I	TTAA	3 cut(s)	167, 1134, 1335
TscAI	CASTG	6 cut(s)	263, 735, 1116, 1228, 1267, 1483
TseFI	GTSAC	3 cut(s)	512, 1375, 1425
TseI	GCWGC	5 cut(s)	122, 178, 368, 1171, 1488
Tsp45I	GTSAC	3 cut(s)	512, 1375, 1425
TspDTI	ATGAA	6 cut(s)	548, 698, 791, 842, 1078, 1134
TspGWI	ACGGA	3 cut(s)	702, 711, 1149
TspRI	CASTG	6 cut(s)	263, 735, 1116, 1228, 1267, 1483
Tth111I	GACNNNGTC	2 cut(s)	113, 226
VpaK11BI	GGWCC	5 cut(s)	10, 77, 493, 719, 1330
XapI	RAATTY	3 cut(s)	916, 967, 979
XceI	RCATGY	3 cut(s)	87, 520, 551
XhoI	CTCGAG	1 cut(s)	475
XspI	CTAG	2 cut(s)	126, 1347
ZraI	GACGTC	1 cut(s)	228
ZrmI	AGTACT	2 cut(s)	130, 503
Zsp2I	ATGCAT	2 cut(s)	873, 1099

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.