Rh1CG431000

Growth-regulating factor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
68820524 .. 68823233
2710 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG431000.1

Sequence Viewer

Length: 1389 bp
ATGACGACAGCAGCTTTGGATTTTCCTTTCACTAATCAACAGTGGAAGGAGCTTGAGAGGCAAGCCATGATTTACAAGTACATGATGGCTTCTATCCCTGTGCCTCGTGACCTCCTCTTTCCCACTACCACCGCCTCCGCCTCGGTTTCTCAATCTCCATTGAGCGGCGGTGGGTTCAATTTGAGGCTGTCGAATAGCAAAGATCCGGAGCCGGGGCGGTGCAAGAGGACGGACGGGAAGAAATGGAGGTGTTCGAGAGATGTTGCGCCGAACCAGAAGTACTGTGAGCGCCACATGCACAGAGGCCGTCCCCGTTCAAGAAAGCATGTGGAAATTCATGCCAACAATACTACAAGCACCACCGCTACCACAGCTAAGAGGGTTCGCCGTGACAACAACAATAGCAACAACATTCGGCCACTATCTCCTCCCACTATCTCGAATCCAAGCCACGAGATGAGCAAAAATGGGTACCCGACTCAGTTTTTCGGATCTTCACTTCAACCATTTCAGCTAACTCAGATGTATTTGGACAAGGCCGGTGTAAAGTCTGCACCTTTTGGAGGTGGTGTAAACTCTGTTTCATCAGACAGAGGAGTCAGAGGCGTGGAGTGGATGATGAAAACTGAAGCTGCTCCGATGAGTAGCTCCGATGCGCAATGGCACGATATGATGCAGAGCAAAACAGAGCTAAGCTGCTCTAGGATCCCCTACTTCGATGCAAATAGTTCTGTTTTCGGCCAGCGTTCTGAGGAAGAGTGTTTCTTGAATCTAAATTCTTATACAAATTTCAATGCCGGAGATGGTCATCATCAACAACAAGGTAATGATTGCAATATGTTTCTGAATCCTGATGTGGTTGCTTTGGAAAACCCTCTACTCGAAGAAACCCCAAGAAGCTTCATCGATGCTTGGTCCAAAAACGACAACGGAGACAACAACAACAACAGCTCTCTTCCATCAAGTGGGAAGCTCTCACCTTCTTCATTGACACTATCAATGGGAGGCTACAATTCCATTAGCGATGAGATGGGTCAGACGCAGATGAGGTTGGGATGTAACCATGGAAGTGGAAACGGGATTAAGCCACAAGTCTCGACCTGGCTCACCCCTGCTTCTTGGGTTCCTTCTCCGCCTGGTGGGCCTTTAGCCGAGGTCTTAAAGCCCACCACCAGCGCCGCCTCAAACCCGTCGTCTCCGATCACCACTAACGGTAACCACGGCGAGTTTAGTAGCCCATTGGGGACTACGGTGTCGTCACCATCCGGAGTTCTTCAGACAACGTTTGCTTCATTCTCTGATAGCAGTGGAAATAGTAGCCCAAATCTTATGAGTTCAAAGGCCAAGACAGAGACTGTTTCTCTGTGGTCGAATCAGAGCAAAGCATAG

Protein Analysis

462

Amino Acids

50.26

Weight (kDa)

8.74

Isoelectric Point (pI)

54.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QLQ PF08880 9 - 41 7.1e-13 QLQ
WRC PF08879 69 - 111 9.6e-21 WRC
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 596, 1252
Acc16I TGCGCA 1 cut(s) 657
Acc65I GGTACC 1 cut(s) 471
AccB1I GGYRCC 1 cut(s) 471
AccB7I CCANNNNNTGG 1 cut(s) 965
AccBSI CCGCTC 1 cut(s) 165
AccIII TCCGGA 2 cut(s) 205, 1265
AciI CCGC 8 cut(s) 132, 138, 165, 168, 217, 363, 1133, 1179
AclI AACGTT 1 cut(s) 1283
AclWI GGATC 4 cut(s) 197, 499, 700, 713
AcoI YGGCCR 2 cut(s) 416, 739
AcsI RAATTY 3 cut(s) 333, 775, 787
AcuI CTGAAG 2 cut(s) 648, 1259
AfaI GTAC 3 cut(s) 80, 281, 473
AfiI CCNNNNNNNGG 5 cut(s) 164, 212, 563, 965, 1139
AgsI TTSAA 6 cut(s) 178, 318, 503, 769, 793, 1338
AjnI CCWGG 2 cut(s) 1100, 1135
Alw26I GTCTC 4 cut(s) 927, 1099, 1200, 1346
AlwI GGATC 4 cut(s) 197, 499, 700, 713
AlwNI CAGNNNCTG 1 cut(s) 1355
Aor13HI TCCGGA 2 cut(s) 205, 1265
AoxI GGCC 6 cut(s) 304, 416, 537, 739, 1142, 1341
ApeKI GCWGC 3 cut(s) 11, 632, 696
ApoI RAATTY 3 cut(s) 333, 775, 787
ArsI GACNNNNNNTTYG 3 cut(s) 30, 1178, 1210
Asp718I GGTACC 1 cut(s) 471
AspLEI GCGC 4 cut(s) 268, 291, 658, 1178
AspS9I GGNCC 2 cut(s) 915, 1142
AsuC2I CCSGG 1 cut(s) 213
AsuHPI GGTGA 4 cut(s) 969, 1099, 1195, 1251
AvaII GGWCC 1 cut(s) 915
BamHI GGATCC 1 cut(s) 705
BanI GGYRCC 1 cut(s) 471
BauI CACGAG 2 cut(s) 105, 452
BbvI GCAGC 3 cut(s) 23, 619, 683
BccI CCATC 5 cut(s) 79, 797, 967, 1024, 1270
BceAI ACGGC 3 cut(s) 291, 372, 1237
BciT130I CCWGG 2 cut(s) 1102, 1137
BcnI CCSGG 1 cut(s) 213
BcoDI GTCTC 4 cut(s) 927, 1099, 1200, 1346
BfaI CTAG 1 cut(s) 702
BfoI RGCGCY 2 cut(s) 292, 1179
BglI GCCNNNNNGGC 1 cut(s) 1141
BisI GCNGC 5 cut(s) 12, 166, 633, 697, 1179
BlpI GCTNAGC 1 cut(s) 692
BlsI GCNGC 5 cut(s) 13, 167, 634, 698, 1180
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 3 cut(s) 213, 1102, 1137
Bme18I GGWCC 1 cut(s) 915
BmgT120I GGNCC 2 cut(s) 915, 1142
BmiI GGNNCC 4 cut(s) 210, 473, 707, 1125
BmrFI CCNGG 3 cut(s) 213, 1102, 1137
BmsI GCATC 4 cut(s) 643, 663, 709, 898
Bpu1102I GCTNAGC 1 cut(s) 692
BpuEI CTTGAG 1 cut(s) 74
BpuMI CCSGG 1 cut(s) 213
Bsa29I ATCGAT 1 cut(s) 906
BsaBI GATNNNNATC 1 cut(s) 807
BsaJI CCNNGG 5 cut(s) 141, 212, 1063, 1152, 1219
BsaWI WCCGGW 2 cut(s) 205, 1265
BsaXI ACNNNNNCTCC 2 cut(s) 555, 585
Bsc4I CCNNNNNNNGG 5 cut(s) 164, 212, 563, 965, 1139
Bse118I RCCGGY 1 cut(s) 539
Bse3DI GCAATG 1 cut(s) 665
Bse8I GATNNNNATC 1 cut(s) 807
BseAI TCCGGA 2 cut(s) 205, 1265
BseBI CCWGG 2 cut(s) 1102, 1137
BseCI ATCGAT 1 cut(s) 906
BseDI CCNNGG 5 cut(s) 141, 212, 1063, 1152, 1219
BseGI GGATG 3 cut(s) 621, 1061, 1262
BseJI GATNNNNATC 1 cut(s) 807
BseLI CCNNNNNNNGG 5 cut(s) 164, 212, 563, 965, 1139
BseMI GCAATG 1 cut(s) 665
BseMII CTCAG 3 cut(s) 494, 533, 741
BseRI GAGGAG 3 cut(s) 104, 417, 609
BseXI GCAGC 3 cut(s) 23, 619, 683
BsgI GTGCAG 1 cut(s) 537
BshFI GGCC 6 cut(s) 306, 418, 539, 741, 1144, 1343
BshNI GGYRCC 1 cut(s) 471
BshVI ATCGAT 1 cut(s) 906
BsiSI CCGG 5 cut(s) 206, 212, 540, 798, 1266
BslFI GGGAC 2 cut(s) 294, 1258
BslI CCNNNNNNNGG 5 cut(s) 164, 212, 563, 965, 1139
BsmAI GTCTC 4 cut(s) 927, 1099, 1200, 1346
BsmBI CGTCTC 1 cut(s) 1200
BsmFI GGGAC 2 cut(s) 294, 1258
BsnI GGCC 6 cut(s) 306, 418, 539, 741, 1144, 1343
Bsp13I TCCGGA 2 cut(s) 205, 1265
Bsp143I GATC 4 cut(s) 202, 491, 705, 1200
Bsp1720I GCTNAGC 1 cut(s) 692
Bsp19I CCATGG 1 cut(s) 1063
BspACI CCGC 8 cut(s) 132, 138, 165, 168, 217, 363, 1133, 1179
BspANI GGCC 6 cut(s) 306, 418, 539, 741, 1144, 1343
BspCNI CTCAG 3 cut(s) 493, 532, 742
BspDI ATCGAT 1 cut(s) 906
BspEI TCCGGA 2 cut(s) 205, 1265
BspLI GGNNCC 4 cut(s) 210, 473, 707, 1125
BspPI GGATC 4 cut(s) 197, 499, 700, 713
BspT107I GGYRCC 1 cut(s) 471
BsrBI CCGCTC 1 cut(s) 165
BsrDI GCAATG 1 cut(s) 665
BsrFI RCCGGY 1 cut(s) 539
BssAI RCCGGY 1 cut(s) 539
BssECI CCNNGG 5 cut(s) 141, 212, 1063, 1152, 1219
BssMI GATC 4 cut(s) 202, 491, 705, 1200
BssSI CACGAG 2 cut(s) 105, 452
BssT1I CCWWGG 1 cut(s) 1063
Bst2BI CACGAG 2 cut(s) 105, 452
Bst2UI CCWGG 2 cut(s) 1102, 1137
Bst4CI ACNGT 5 cut(s) 42, 284, 1214, 1252, 1357
Bst6I CTCTTC 2 cut(s) 750, 960
BstC8I GCNNGC 2 cut(s) 63, 743
BstDEI CTNAG 5 cut(s) 375, 480, 519, 692, 750
BstDSI CCRYGG 2 cut(s) 1063, 1219
BstEII GGTNACC 1 cut(s) 1214
BstENI CCTNNNNNAGG 1 cut(s) 561
BstF5I GGATG 3 cut(s) 621, 1061, 1262
BstH2I RGCGCY 2 cut(s) 292, 1179
BstHHI GCGC 4 cut(s) 268, 291, 658, 1178
BstKTI GATC 4 cut(s) 205, 494, 708, 1203
BstMAI GTCTC 4 cut(s) 927, 1099, 1200, 1346
BstMBI GATC 4 cut(s) 202, 491, 705, 1200
BstMWI GCNNNNNNNGC 4 cut(s) 58, 295, 371, 1141
BstNI CCWGG 2 cut(s) 1102, 1137
BstNSI RCATGY 2 cut(s) 298, 329
BstPI GGTNACC 1 cut(s) 1214
BstSCI CCNGG 3 cut(s) 211, 1100, 1135
BstV1I GCAGC 3 cut(s) 23, 619, 683
BstX2I RGATCY 3 cut(s) 202, 491, 705
BstXI CCANNNNNNTGG 1 cut(s) 1070
BstYI RGATCY 3 cut(s) 202, 491, 705
Bsu15I ATCGAT 1 cut(s) 906
BsuRI GGCC 6 cut(s) 306, 418, 539, 741, 1144, 1343
BsuTUI ATCGAT 1 cut(s) 906
BtgI CCRYGG 2 cut(s) 1063, 1219
BtgZI GCGATG 1 cut(s) 1038
BtsCI GGATG 3 cut(s) 621, 1061, 1262
BtsI GCAGTG 1 cut(s) 1312
BtsIMutI CAGTG 2 cut(s) 47, 1312
Cac8I GCNNGC 2 cut(s) 63, 743
CaiI CAGNNNCTG 1 cut(s) 1355
CfoI GCGC 4 cut(s) 268, 291, 658, 1178
Cfr10I RCCGGY 1 cut(s) 539
Cfr13I GGNCC 2 cut(s) 915, 1142
ClaI ATCGAT 1 cut(s) 906
CseI GACGC 1 cut(s) 1048
Csp6I GTAC 3 cut(s) 79, 280, 472
CviAII CATG 6 cut(s) 67, 82, 295, 326, 338, 1064
CviQI GTAC 3 cut(s) 79, 280, 472
DdeI CTNAG 5 cut(s) 375, 480, 519, 692, 750
DpnI GATC 4 cut(s) 204, 493, 707, 1202
DpnII GATC 4 cut(s) 202, 491, 705, 1200
DrdI GACNNNNNNGTC 2 cut(s) 596, 1252
DseDI GACNNNNNNGTC 2 cut(s) 596, 1252
EaeI YGGCCR 2 cut(s) 416, 739
Eam1104I CTCTTC 2 cut(s) 750, 960
EarI CTCTTC 2 cut(s) 750, 960
EciI GGCGGA 2 cut(s) 127, 1122
Eco130I CCWWGG 1 cut(s) 1063
Eco47I GGWCC 1 cut(s) 915
Eco57I CTGAAG 2 cut(s) 648, 1259
Eco91I GGTNACC 1 cut(s) 1214
EcoNI CCTNNNNNAGG 1 cut(s) 561
EcoO65I GGTNACC 1 cut(s) 1214
EcoRII CCWGG 2 cut(s) 1100, 1135
EcoT14I CCWWGG 1 cut(s) 1063
ErhI CCWWGG 1 cut(s) 1063
Esp3I CGTCTC 1 cut(s) 1200
FaeI CATG 6 cut(s) 70, 85, 298, 329, 341, 1067
FaqI GGGAC 2 cut(s) 294, 1258
FatI CATG 6 cut(s) 66, 81, 294, 325, 337, 1063
Fnu4HI GCNGC 5 cut(s) 12, 166, 633, 697, 1179
FokI GGATG 3 cut(s) 628, 1068, 1249
Fsp4HI GCNGC 5 cut(s) 12, 166, 633, 697, 1179
FspBI CTAG 1 cut(s) 702
FspI TGCGCA 1 cut(s) 657
GlaI GCGC 4 cut(s) 267, 290, 657, 1177
GluI GCNGC 5 cut(s) 12, 166, 633, 697, 1179
HaeII RGCGCY 2 cut(s) 292, 1179
HaeIII GGCC 6 cut(s) 306, 418, 539, 741, 1144, 1343
HapII CCGG 5 cut(s) 206, 212, 540, 798, 1266
HgaI GACGC 1 cut(s) 1048
HhaI GCGC 4 cut(s) 268, 291, 658, 1178
Hin1II CATG 6 cut(s) 70, 85, 298, 329, 341, 1067
Hin6I GCGC 4 cut(s) 266, 289, 656, 1176
HinP1I GCGC 4 cut(s) 266, 289, 656, 1176
HindIII AAGCTT 1 cut(s) 898
HinfI GANTC 6 cut(s) 442, 478, 597, 769, 847, 1372
HpaII CCGG 5 cut(s) 206, 212, 540, 798, 1266
HphI GGTGA 4 cut(s) 969, 1099, 1195, 1251
Hpy166II GTNNAC 1 cut(s) 574
Hpy188III TCNNGA 9 cut(s) 107, 206, 255, 318, 439, 766, 851, 1096, 1266
Hpy8I GTNNAC 1 cut(s) 574
Hpy99I CGWCG 1 cut(s) 1195
HpyAV CCTTC 3 cut(s) 40, 990, 1137
HpyCH4III ACNGT 5 cut(s) 42, 284, 1214, 1252, 1357
HpyCH4IV ACGT 1 cut(s) 1283
HpyCH4V TGCA 6 cut(s) 222, 298, 554, 676, 722, 834
HpyF10VI GCNNNNNNNGC 4 cut(s) 58, 295, 371, 1141
HpyF3I CTNAG 5 cut(s) 375, 480, 519, 692, 750
HpySE526I ACGT 1 cut(s) 1283
Hsp92II CATG 6 cut(s) 70, 85, 298, 329, 341, 1067
HspAI GCGC 4 cut(s) 266, 289, 656, 1176
Kpn2I TCCGGA 2 cut(s) 205, 1265
KpnI GGTACC 1 cut(s) 475
Kzo9I GATC 4 cut(s) 202, 491, 705, 1200
LmnI GCTCC 4 cut(s) 49, 208, 640, 653
Lsp1109I GCAGC 3 cut(s) 23, 619, 683
LweI GCATC 4 cut(s) 643, 663, 709, 898
MaeI CTAG 1 cut(s) 702
MaeII ACGT 1 cut(s) 1283
MaeIII GTNAC 5 cut(s) 107, 389, 1058, 1214, 1257
MalI GATC 4 cut(s) 204, 493, 707, 1202
MbiI CCGCTC 1 cut(s) 165
MboI GATC 4 cut(s) 202, 491, 705, 1200
MboII GAAGA 7 cut(s) 250, 486, 767, 896, 947, 975, 1265
MflI RGATCY 3 cut(s) 202, 491, 705
MluCI AATT 5 cut(s) 178, 333, 775, 787, 1012
MlyI GAGTC 2 cut(s) 472, 606
MroI TCCGGA 2 cut(s) 205, 1265
MseI TTAA 2 cut(s) 1083, 1160
MslI CAYNNNNRTG 1 cut(s) 1068
MspI CCGG 5 cut(s) 206, 212, 540, 798, 1266
MspR9I CCNGG 3 cut(s) 213, 1102, 1137
MvaI CCWGG 2 cut(s) 1102, 1137
MwoI GCNNNNNNNGC 4 cut(s) 58, 295, 371, 1141
NciI CCSGG 1 cut(s) 213
NcoI CCATGG 1 cut(s) 1063
NdeII GATC 4 cut(s) 202, 491, 705, 1200
NlaIII CATG 6 cut(s) 70, 85, 298, 329, 341, 1067
NlaIV GGNNCC 4 cut(s) 210, 473, 707, 1125
NmeAIII GCCGAG 1 cut(s) 1177
NmuCI GTSAC 3 cut(s) 107, 389, 1257
NsbI TGCGCA 1 cut(s) 657
NspI RCATGY 2 cut(s) 298, 329
PfeI GAWTC 4 cut(s) 442, 769, 847, 1372
PflMI CCANNNNNTGG 1 cut(s) 965
PkrI GCNGC 5 cut(s) 13, 167, 634, 698, 1180
PleI GAGTC 2 cut(s) 472, 605
PpsI GAGTC 2 cut(s) 472, 605
Psp1406I AACGTT 1 cut(s) 1283
Psp6I CCWGG 2 cut(s) 1100, 1135
PspEI GGTNACC 1 cut(s) 1214
PspGI CCWGG 2 cut(s) 1100, 1135
PspN4I GGNNCC 4 cut(s) 210, 473, 707, 1125
PspPI GGNCC 2 cut(s) 915, 1142
PsrI GAACNNNNNNTAC 2 cut(s) 263, 295
PstNI CAGNNNCTG 1 cut(s) 1355
PsuI RGATCY 3 cut(s) 202, 491, 705
RsaI GTAC 3 cut(s) 80, 281, 473
RsaNI GTAC 3 cut(s) 79, 280, 472
RseI CAYNNNNRTG 1 cut(s) 1068
SaqAI TTAA 2 cut(s) 1083, 1160
SatI GCNGC 5 cut(s) 12, 166, 633, 697, 1179
Sau3AI GATC 4 cut(s) 202, 491, 705, 1200
Sau96I GGNCC 2 cut(s) 915, 1142
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 2 cut(s) 472, 606
ScrFI CCNGG 3 cut(s) 213, 1102, 1137
SfaNI GCATC 4 cut(s) 643, 663, 709, 898
SinI GGWCC 1 cut(s) 915
SmiMI CAYNNNNRTG 1 cut(s) 1068
SmlI CTYRAG 1 cut(s) 53
SmoI CTYRAG 1 cut(s) 53
Sse9I AATT 5 cut(s) 178, 333, 775, 787, 1012
SsiI CCGC 8 cut(s) 132, 138, 165, 168, 217, 363, 1133, 1179
SspMI CTAG 1 cut(s) 702
StyD4I CCNGG 3 cut(s) 211, 1100, 1135
StyI CCWWGG 1 cut(s) 1063
TaaI ACNGT 5 cut(s) 42, 284, 1214, 1252, 1357
TaiI ACGT 1 cut(s) 1286
TaqI TCGA 8 cut(s) 191, 254, 440, 717, 882, 906, 1097, 1370
TasI AATT 5 cut(s) 178, 333, 775, 787, 1012
TatI WGTACW 2 cut(s) 78, 279
TauI GCSGC 2 cut(s) 168, 1181
TfiI GAWTC 4 cut(s) 442, 769, 847, 1372
Tru1I TTAA 2 cut(s) 1083, 1160
Tru9I TTAA 2 cut(s) 1083, 1160
TscAI CASTG 2 cut(s) 47, 1312
TseFI GTSAC 3 cut(s) 107, 389, 1257
TseI GCWGC 3 cut(s) 11, 632, 696
Tsp45I GTSAC 3 cut(s) 107, 389, 1257
TspDTI ATGAA 6 cut(s) 326, 573, 635, 892, 975, 1281
TspGWI ACGGA 2 cut(s) 245, 945
TspRI CASTG 2 cut(s) 47, 1312
Van91I CCANNNNNTGG 1 cut(s) 965
VpaK11BI GGWCC 1 cut(s) 915
XagI CCTNNNNNAGG 1 cut(s) 561
XapI RAATTY 3 cut(s) 333, 775, 787
XceI RCATGY 2 cut(s) 298, 329
XspI CTAG 1 cut(s) 702
ZrmI AGTACT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.