Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0012005

Physical Location & Seq

Genomic Coordinates Forward (+)

864457 .. 869106

Gene Structure 4650 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1011200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGAGGAAGTGGACGATCCCTTCCGTTCTGCTTCTGCTCTGCCTTCTCTCCCTCCTCCCCGATCAAGGTCGGAAATTACAGGCCAACGCGGAGGCTGATTCCGACGAGCTCGTAGATCCGCCGAAGGTGGAGGAGAAGATCGGCGCTGTTCCCAGTGGGCTATCCACCGACTCCGACGTCGCCAAGAGGGAGGCAGAGTCAATCTCGAAGAGATCGCAGCGCAGCAACGCGCAGCACTTCGAGTTCCAGGCGGAGGTGTCTCGGTTGATGGACATTATCATCCACTCCCTCTACAGCAACAAGGACATTTTCCTCAGGGAGTTGATCTCCAATGCTTCCGATGCACTGGACAAGATTAGATTCCTCGCCCTCACGGACAAGGATGTTTTGGGCGAAGGCGATGACACTAACCTCGAAATTCAGATTAAATTAGACAAGGAGAAGAGAATTATCTCCATTCGCGATAGGGGTATCGGTATGACAAAGGAAGACTTAATCAAGAACTTGGGAACCATAGCTAAATCTGGAACTTCAGCCTTTGTGGAGAAGATGCAGACTAGCGGCGATCTCAATCTTATTGGGCAGTTTGGAGTTGGGTTCTACTCTGTGTACTTGGTTGCCGATAATGTGGAAGTCATCAGCAAACACAATGATGATAAACAGCATATTTGGGAGTCAAAGGCTGATGGGTCATTCGTAGTCGCCGAGGATACAGAAAATGAGCCACTAGGACGTGGTACTGAAATTAGACTGCACCTTAGAGAGGAAGCAGGGGAGTATTTGGAAGAGAGCAAACTAAAAGAGTTGGTGAAGAAATATTCTGAATTTATCAACTTCCCCATCCGTTTGTGGGCAAGCAAAGAGGTAGATGTGGAGGTTCCTGCTGATGAGGATGAGTCCAATGATGAAGAGGAATCATCTGAAACTGAGAAAAGCGAAGAGGAAACTGAAAAAGGCGAAGATGAAGATGAAGATGCTGAGAAGAAACCAAAGACAAAGACAAAAAAAGAAACTACTTATGAATGGGAACTTCTTAATGATGTTAAAGCTATATGGTTACGCAGTCCGAAGGAAGTGACCGATGAAGAGTACACCAAATTCTATCACTCTCTCGCCAAGGATTTCGGTGATGAGAAGCCTTTATCATGGAGCCACTTTACTGCTGAAGGTGATGTGGAATTCAAGGCTGTCCTGTTTGTGCCTCCTAAGGCTCCTCATGATTTATACGAGAGCTATTACAATGCCAATAAATCCAACTTGAAGTTGTATGTTAGAAGGGTTTTCATATCAGATGAATTTGATGAGCTCTTGCCAAAGTATCTAAACTTTTTGTTGGGTCTTGTTGATTCCGACACCTTGCCACTCAATGTATCCCGAGAAATGCTTCAACAACACAGCAGTTTGAAGACCATCAAGAAGAAACTTATCCGCAAAGCTCTTGATATGATCCGTAAACTTGCTGAGGAAGATCCTGATGAGTCCAGTGACAAAGACAACAAAGAGGTTGAAAAAAGTGAGGATGACGAGAAGAGAGGCCAATACACAAGATTCTGGAATGAATTCGGCAAGTCCATTAAACTTGGTATCATTGAAGATGCGGCTAACAGGAATCGTTTGGCAAAACTCCTAAGATTCGAGAGCACCAAGTCAGATGGCAAATTGACTTCACTAGATCAGTACATTTCAAGGATGAAATCTGGGCAGAAGGACATATTCTACATTACTGGAGCCAGCAAGGAACAATTGGAAAAATCTCCATTCCTCGAGCGGCTTAAGAAGAAAAACTTTGAGGTTATTTTCTTCACAGATCCAGTTGACGAATATCTGATGCAATACTTGATGGACTATGAAGACAAGAAATTCCAGAACGTGTCAAAGGAGGGCTTGAAACTCGGCAAAGACTCAAAGGACAAGGAACTCAAGGAATCATACAAGGAGCTCACTAAATGGTGGAAGAGTGCTCTTGCCAGCGACAATGTGGATGATGTAAAGCTGTCCAACCGTTTGGCCGACACCCCTTGTGTGGTTGTGACATCAAAGTATGGTTGGAGTGCAAACATGGAGAGGATCATGCAGTCTCAGACATTATCAGACGCTAACAAGCAAGGATACATGCGTGGCAAGAGGATACTTGAGATTAACCCAAGGCACCCAATCATCAAGGAGCTCCGCGAGAGAGTAGTAAAGAACGCCGAGGATGAGAGTGTGAAGCTGACAGCGCAGCTTATTTACCAGACCGCACTCATGGAGAGCGGCTTCAATCTTCCAGACCCTAAGGACTTCGCTTCCCGCATCTACAGTTCAGTGAAGTCTAGCCTAAACATCAACCCTGACGTTGAAGTTGAGGAGGAAGATGATGCCGAAGAAGTTGAGACAGAAACTGCTGCAAACGAAGCTGCAGCTACCCCGGAGGCTGAGGCTGAGATCGATGCTGATTCGCTTAAGGACGAGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002790 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006970 GO:0008104 GO:0008150 GO:0009266 GO:0009306 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009888 GO:0009934 GO:0009987 GO:0010035 GO:0010038 GO:0010073 GO:0010075 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022603 GO:0030054 GO:0031090 GO:0031974 GO:0032501 GO:0032502 GO:0032940 GO:0033036 GO:0033554 GO:0034976 GO:0040008 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046686 GO:0046903 GO:0048046 GO:0048507 GO:0048509 GO:0048638 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071702 GO:0071705 GO:0071944 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

819

Amino Acids

93.59

Weight (kDa)

4.85

Isoelectric Point (pI)

34.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	104 - 256	7.5e-08	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3	PF13589	106 - 222	8.5e-09	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90	PF00183	259 - 798	1.1e-216	Hsp90 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24190 AT4G24190
fragaria_vesca	FvH4_2g38300 FvH4_2g38300 FvH4_2g38300
malus_domestica	MD08G1011200.v1.1
prunus_persica	Prupe.1G363900_v2.0.a1 Prupe.1G363900_v2.0.a1
pyrus_communis	pycom08g00990 pycom15g00960 pycom15g00970
rosa_chinensis	RchiOBHm_Chr6g0303071
rosa_laevigata	RLG00000011111
rosa_multiflora	Rmu_ssc0000460.1_g000034
rosa_roxburghii	Rroxscaffold_7G00165040
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG432700 Rh6DG431900
rosa_wichuraiana	Rw6G037510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	176
AatII	GACGTC	1 cut(s)	180
AccB1I	GGYRCC	1 cut(s)	2148
AccBSI	CCGCTC	2 cut(s)	1768, 2253
AccII	CGCG	4 cut(s)	89, 230, 462, 2172
AclWI	GGATC	6 cut(s)	10, 110, 1441, 1463, 1802, 2075
AcoI	YGGCCR	1 cut(s)	2007
AcsI	RAATTY	7 cut(s)	417, 824, 1097, 1178, 1295, 1559, 1859
AcuI	CTGAAG	2 cut(s)	516, 1185
AcyI	GRCGYC	1 cut(s)	177
AfaI	GTAC	4 cut(s)	611, 739, 1091, 1679
AfiI	CCNNNNNNNGG	5 cut(s)	65, 253, 763, 850, 2023
AflII	CTTAAG	2 cut(s)	1772, 2441
AflIII	ACRYGT	1 cut(s)	1869
AjiI	CACGTC	1 cut(s)	734
AjnI	CCWGG	1 cut(s)	246
Alw21I	GWGCWC	6 cut(s)	111, 1308, 1643, 1941, 1963, 2169
Alw26I	GTCTC	3 cut(s)	264, 2082, 2366
AlwI	GGATC	6 cut(s)	10, 110, 1441, 1463, 1802, 2075
AlwNI	CAGNNNCTG	1 cut(s)	2381
Ama87I	CYCGRG	2 cut(s)	1374, 1763
AoxI	GGCC	3 cut(s)	81, 1534, 2007
ApeKI	GCWGC	7 cut(s)	217, 222, 232, 2221, 2384, 2396, 2399
ApoI	RAATTY	7 cut(s)	417, 824, 1097, 1178, 1295, 1559, 1859
Asp700I	GAANNNNTTC	2 cut(s)	1383, 1559
AspLEI	GCGC	4 cut(s)	146, 222, 232, 2221
AsuC2I	CCSGG	1 cut(s)	2408
AsuHPI	GGTGA	3 cut(s)	820, 1139, 1181
AvaI	CYCGRG	2 cut(s)	1374, 1763
AxyI	CCTNAGG	3 cut(s)	314, 1206, 2274
BaeI	ACNNNNGTAYC	2 cut(s)	2101, 2134
BanI	GGYRCC	1 cut(s)	2148
BanII	GRGCYC	4 cut(s)	111, 1308, 1941, 2169
BbsI	GAAGAC	3 cut(s)	495, 1412, 1857
Bbv12I	GWGCWC	6 cut(s)	111, 1308, 1643, 1941, 1963, 2169
BbvCI	CCTCAGC	2 cut(s)	1461, 2415
BbvI	GCAGC	7 cut(s)	229, 234, 244, 2233, 2371, 2383, 2411
BccI	CCATC	6 cut(s)	262, 680, 848, 1418, 1646, 1834
BciT130I	CCWGG	1 cut(s)	248
BciVI	GTATCC	4 cut(s)	703, 1381, 2102, 2121
BcnI	CCSGG	1 cut(s)	2408
BcoDI	GTCTC	3 cut(s)	264, 2082, 2366
BfaI	CTAG	4 cut(s)	558, 728, 1670, 2313
BfmI	CTRYAG	3 cut(s)	292, 2296, 2397
BfoI	RGCGCY	1 cut(s)	147
BfrI	CTTAAG	2 cut(s)	1772, 2441
BfuI	GTATCC	4 cut(s)	703, 1381, 2102, 2121
Bme1390I	CCNGG	2 cut(s)	248, 2408
BmeT110I	CYCGRG	2 cut(s)	1374, 1763
BmgBI	CACGTC	1 cut(s)	734
BmiI	GGNNCC	6 cut(s)	511, 879, 1151, 1212, 1729, 2150
BmrFI	CCNGG	2 cut(s)	248, 2408
BmrI	ACTGGG	1 cut(s)	147
BmsI	GCATC	8 cut(s)	331, 540, 964, 1585, 1818, 2301, 2347, 2419
BmuI	ACTGGG	1 cut(s)	147
BpiI	GAAGAC	3 cut(s)	495, 1412, 1857
BplI	GAGNNNNNCTC	4 cut(s)	188, 220, 311, 343
BpmI	CTGGAG	1 cut(s)	1746
Bpu10I	CCTNAGC	2 cut(s)	1461, 2415
BpuEI	CTTGAG	2 cut(s)	1904, 2153
BpuMI	CCSGG	1 cut(s)	2408
Bsa29I	ATCGAT	1 cut(s)	2427
BsaBI	GATNNNNATC	1 cut(s)	570
BsaHI	GRCGYC	1 cut(s)	177
BsaJI	CCNNGG	5 cut(s)	705, 1116, 2144, 2193, 2406
BsaXI	ACNNNNNCTCC	2 cut(s)	182, 212
Bsc4I	CCNNNNNNNGG	5 cut(s)	65, 253, 763, 850, 2023
Bse1I	ACTGG	5 cut(s)	153, 351, 1482, 1729, 1811
Bse21I	CCTNAGG	3 cut(s)	314, 1206, 2274
Bse8I	GATNNNNATC	1 cut(s)	570
BseBI	CCWGG	1 cut(s)	248
BseCI	ATCGAT	1 cut(s)	2427
BseDI	CCNNGG	5 cut(s)	705, 1116, 2144, 2193, 2406
BseGI	GGATG	8 cut(s)	279, 388, 840, 898, 1525, 1695, 1987, 2203
BseJI	GATNNNNATC	1 cut(s)	570
BseLI	CCNNNNNNNGG	5 cut(s)	65, 253, 763, 850, 2023
BseMII	CTCAG	7 cut(s)	328, 918, 969, 1452, 2093, 2406, 2412
BseNI	ACTGG	5 cut(s)	153, 351, 1482, 1729, 1811
BseRI	GAGGAG	4 cut(s)	44, 146, 1203, 2360
BseXI	GCAGC	7 cut(s)	229, 234, 244, 2233, 2371, 2383, 2411
BsgI	GTGCAG	1 cut(s)	737
Bsh1236I	CGCG	4 cut(s)	89, 230, 462, 2172
BshFI	GGCC	3 cut(s)	83, 1536, 2009
BshNI	GGYRCC	1 cut(s)	2148
BshVI	ATCGAT	1 cut(s)	2427
BsiHKAI	GWGCWC	6 cut(s)	111, 1308, 1643, 1941, 1963, 2169
BsiHKCI	CYCGRG	2 cut(s)	1374, 1763
BsiSI	CCGG	1 cut(s)	2408
BslI	CCNNNNNNNGG	5 cut(s)	65, 253, 763, 850, 2023
BsmAI	GTCTC	3 cut(s)	264, 2082, 2366
BsnI	GGCC	3 cut(s)	83, 1536, 2009
BsoBI	CYCGRG	2 cut(s)	1374, 1763
Bsp1286I	GDGCHC	6 cut(s)	111, 1308, 1643, 1941, 1963, 2169
Bsp68I	TCGCGA	1 cut(s)	462
BspANI	GGCC	3 cut(s)	83, 1536, 2009
BspCNI	CTCAG	7 cut(s)	327, 919, 970, 1453, 2092, 2407, 2413
BspDI	ATCGAT	1 cut(s)	2427
BspFNI	CGCG	4 cut(s)	89, 230, 462, 2172
BspHI	TCATGA	1 cut(s)	1216
BspLI	GGNNCC	6 cut(s)	511, 879, 1151, 1212, 1729, 2150
BspMAI	CTGCAG	1 cut(s)	2401
BspPI	GGATC	6 cut(s)	10, 110, 1441, 1463, 1802, 2075
BspT107I	GGYRCC	1 cut(s)	2148
BspTI	CTTAAG	2 cut(s)	1772, 2441
BsrBI	CCGCTC	2 cut(s)	1768, 2253
BsrI	ACTGG	5 cut(s)	153, 351, 1482, 1729, 1811
BssECI	CCNNGG	5 cut(s)	705, 1116, 2144, 2193, 2406
BssNI	GRCGYC	1 cut(s)	177
BssT1I	CCWWGG	2 cut(s)	1116, 2144
Bst2UI	CCWGG	1 cut(s)	248
Bst4CI	ACNGT	2 cut(s)	2003, 2300
Bst6I	CTCTTC	8 cut(s)	203, 437, 780, 903, 933, 1080, 1523, 1949
BstACI	GRCGYC	1 cut(s)	177
BstAFI	CTTAAG	2 cut(s)	1772, 2441
BstC8I	GCNNGC	3 cut(s)	856, 1732, 1969
BstENI	CCTNNNNNAGG	1 cut(s)	761
BstF5I	GGATG	8 cut(s)	279, 388, 840, 898, 1525, 1695, 1987, 2203
BstFNI	CGCG	4 cut(s)	89, 230, 462, 2172
BstH2I	RGCGCY	1 cut(s)	147
BstHHI	GCGC	4 cut(s)	146, 222, 232, 2221
BstMAI	GTCTC	3 cut(s)	264, 2082, 2366
BstMWI	GCNNNNNNNGC	3 cut(s)	341, 2218, 2393
BstNI	CCWGG	1 cut(s)	248
BstNSI	RCATGY	1 cut(s)	2116
BstSCI	CCNGG	2 cut(s)	246, 2406
BstSFI	CTRYAG	3 cut(s)	292, 2296, 2397
BstUI	CGCG	4 cut(s)	89, 230, 462, 2172
BstV1I	GCAGC	7 cut(s)	229, 234, 244, 2233, 2371, 2383, 2411
BstV2I	GAAGAC	3 cut(s)	495, 1412, 1857
BstX2I	RGATCY	3 cut(s)	115, 1468, 1807
BstXI	CCANNNNNNTGG	1 cut(s)	2005
BstYI	RGATCY	3 cut(s)	115, 1468, 1807
Bsu15I	ATCGAT	1 cut(s)	2427
Bsu36I	CCTNAGG	3 cut(s)	314, 1206, 2274
BsuI	GTATCC	4 cut(s)	703, 1381, 2102, 2121
BsuRI	GGCC	3 cut(s)	83, 1536, 2009
BsuTUI	ATCGAT	1 cut(s)	2427
BtgZI	GCGATG	1 cut(s)	414
BtrI	CACGTC	1 cut(s)	734
BtsCI	GGATG	8 cut(s)	279, 388, 840, 898, 1525, 1695, 1987, 2203
BtsIMutI	CAGTG	4 cut(s)	160, 344, 1489, 2310
BtuMI	TCGCGA	1 cut(s)	462
Cac8I	GCNNGC	3 cut(s)	856, 1732, 1969
CaiI	CAGNNNCTG	1 cut(s)	2381
CciI	TCATGA	1 cut(s)	1216
CfoI	GCGC	4 cut(s)	146, 222, 232, 2221
ClaI	ATCGAT	1 cut(s)	2427
CseI	GACGC	1 cut(s)	2102
Csp6I	GTAC	4 cut(s)	610, 738, 1090, 1678
CviAII	CATG	6 cut(s)	1146, 1217, 2059, 2071, 2113, 2245
CviQI	GTAC	4 cut(s)	610, 738, 1090, 1678
DrdI	GACNNNNNNGTC	1 cut(s)	176
DseDI	GACNNNNNNGTC	1 cut(s)	176
EaeI	YGGCCR	1 cut(s)	2007
Eam1104I	CTCTTC	8 cut(s)	203, 437, 780, 903, 933, 1080, 1523, 1949
EarI	CTCTTC	8 cut(s)	203, 437, 780, 903, 933, 1080, 1523, 1949
EciI	GGCGGA	2 cut(s)	108, 266
Ecl136II	GAGCTC	4 cut(s)	109, 1306, 1939, 2167
Eco130I	CCWWGG	2 cut(s)	1116, 2144
Eco24I	GRGCYC	4 cut(s)	111, 1308, 1941, 2169
Eco53kI	GAGCTC	4 cut(s)	109, 1306, 1939, 2167
Eco57I	CTGAAG	2 cut(s)	516, 1185
Eco81I	CCTNAGG	3 cut(s)	314, 1206, 2274
Eco88I	CYCGRG	2 cut(s)	1374, 1763
EcoICRI	GAGCTC	4 cut(s)	109, 1306, 1939, 2167
EcoNI	CCTNNNNNAGG	1 cut(s)	761
EcoRI	GAATTC	2 cut(s)	1178, 1559
EcoRII	CCWGG	1 cut(s)	246
EcoT14I	CCWWGG	2 cut(s)	1116, 2144
EcoT38I	GRGCYC	4 cut(s)	111, 1308, 1941, 2169
ErhI	CCWWGG	2 cut(s)	1116, 2144
FaeI	CATG	6 cut(s)	1149, 1220, 2062, 2074, 2116, 2248
FalI	AAGNNNNNCTT	6 cut(s)	476, 508, 1769, 1801, 1868, 1900
FatI	CATG	6 cut(s)	1145, 1216, 2058, 2070, 2112, 2244
FauI	CCCGC	1 cut(s)	2297
FokI	GGATG	8 cut(s)	266, 395, 827, 905, 1532, 1702, 1994, 2210
FriOI	GRGCYC	4 cut(s)	111, 1308, 1941, 2169
FspBI	CTAG	4 cut(s)	558, 728, 1670, 2313
GlaI	GCGC	4 cut(s)	145, 221, 231, 2220
GsuI	CTGGAG	1 cut(s)	1746
HaeII	RGCGCY	1 cut(s)	147
HaeIII	GGCC	3 cut(s)	83, 1536, 2009
HapII	CCGG	1 cut(s)	2408
HgaI	GACGC	1 cut(s)	2102
HhaI	GCGC	4 cut(s)	146, 222, 232, 2221
Hin1I	GRCGYC	1 cut(s)	177
Hin1II	CATG	6 cut(s)	1149, 1220, 2062, 2074, 2116, 2248
Hin6I	GCGC	4 cut(s)	144, 220, 230, 2219
HinP1I	GCGC	4 cut(s)	144, 220, 230, 2219
HincII	GTYRAC	1 cut(s)	1816
HindII	GTYRAC	1 cut(s)	1816
HpaII	CCGG	1 cut(s)	2408
HphI	GGTGA	3 cut(s)	820, 1139, 1181
Hpy166II	GTNNAC	5 cut(s)	12, 610, 1092, 1454, 1816
Hpy8I	GTNNAC	5 cut(s)	12, 610, 1092, 1454, 1816
Hpy99I	CGWCG	3 cut(s)	107, 179, 182
HpyAV	CCTTC	8 cut(s)	30, 53, 118, 389, 1063, 1160, 1269, 1699
HpyCH4III	ACNGT	2 cut(s)	2003, 2300
HpyCH4IV	ACGT	4 cut(s)	177, 733, 1869, 2334
HpyCH4V	TGCA	8 cut(s)	344, 553, 754, 1831, 2054, 2074, 2387, 2399
HpyF10VI	GCNNNNNNNGC	3 cut(s)	341, 2218, 2393
HpySE526I	ACGT	4 cut(s)	177, 733, 1869, 2334
Hsp92I	GRCGYC	1 cut(s)	177
Hsp92II	CATG	6 cut(s)	1149, 1220, 2062, 2074, 2116, 2248
HspAI	GCGC	4 cut(s)	144, 220, 230, 2219
LmnI	GCTCC	6 cut(s)	1149, 1216, 1727, 1936, 2164, 2172
Lsp1109I	GCAGC	7 cut(s)	229, 234, 244, 2233, 2371, 2383, 2411
LweI	GCATC	8 cut(s)	331, 540, 964, 1585, 1818, 2301, 2347, 2419
MaeI	CTAG	4 cut(s)	558, 728, 1670, 2313
MaeII	ACGT	4 cut(s)	177, 733, 1869, 2334
MaeIII	GTNAC	4 cut(s)	1056, 1075, 1484, 2029
MbiI	CCGCTC	2 cut(s)	1768, 2253
MfeI	CAATTG	1 cut(s)	1742
MflI	RGATCY	3 cut(s)	115, 1468, 1807
MhlI	GDGCHC	6 cut(s)	111, 1308, 1643, 1941, 1963, 2169
MlyI	GAGTC	6 cut(s)	164, 206, 683, 905, 1487, 1895
MmeI	TCCRAC	7 cut(s)	50, 126, 198, 1278, 1374, 2022, 2027
MroXI	GAANNNNTTC	2 cut(s)	1383, 1559
MseI	TTAA	8 cut(s)	426, 494, 1035, 1044, 1575, 1773, 2139, 2442
MslI	CAYNNNNRTG	1 cut(s)	651
MspCI	CTTAAG	2 cut(s)	1772, 2441
MspI	CCGG	1 cut(s)	2408
MspR9I	CCNGG	2 cut(s)	248, 2408
MunI	CAATTG	1 cut(s)	1742
MvaI	CCWGG	1 cut(s)	248
MvnI	CGCG	4 cut(s)	89, 230, 462, 2172
MwoI	GCNNNNNNNGC	3 cut(s)	341, 2218, 2393
NciI	CCSGG	1 cut(s)	2408
NlaIII	CATG	6 cut(s)	1149, 1220, 2062, 2074, 2116, 2248
NlaIV	GGNNCC	6 cut(s)	511, 879, 1151, 1212, 1729, 2150
NmeAIII	GCCGAG	3 cut(s)	730, 1872, 2218
NmuCI	GTSAC	3 cut(s)	1075, 1484, 2029
NruI	TCGCGA	1 cut(s)	462
NspI	RCATGY	1 cut(s)	2116
PaeR7I	CTCGAG	1 cut(s)	1763
PagI	TCATGA	1 cut(s)	1216
PcsI	WCGNNNNNNNCGW	1 cut(s)	702
PdmI	GAANNNNTTC	2 cut(s)	1383, 1559
PfeI	GAWTC	9 cut(s)	98, 360, 914, 1346, 1548, 1609, 1632, 1925, 2435
PleI	GAGTC	6 cut(s)	164, 205, 682, 904, 1486, 1895
PpsI	GAGTC	6 cut(s)	164, 205, 682, 904, 1486, 1895
Psp124BI	GAGCTC	4 cut(s)	111, 1308, 1941, 2169
Psp6I	CCWGG	1 cut(s)	246
PspGI	CCWGG	1 cut(s)	246
PspN4I	GGNNCC	6 cut(s)	511, 879, 1151, 1212, 1729, 2150
PspXI	VCTCGAGB	1 cut(s)	1763
PstI	CTGCAG	1 cut(s)	2401
PstNI	CAGNNNCTG	1 cut(s)	2381
PsuI	RGATCY	3 cut(s)	115, 1468, 1807
RruI	TCGCGA	1 cut(s)	462
RsaI	GTAC	4 cut(s)	611, 739, 1091, 1679
RsaNI	GTAC	4 cut(s)	610, 738, 1090, 1678
RseI	CAYNNNNRTG	1 cut(s)	651
SacI	GAGCTC	4 cut(s)	111, 1308, 1941, 2169
SaqAI	TTAA	8 cut(s)	426, 494, 1035, 1044, 1575, 1773, 2139, 2442
SchI	GAGTC	6 cut(s)	164, 206, 683, 905, 1487, 1895
ScrFI	CCNGG	2 cut(s)	248, 2408
SduI	GDGCHC	6 cut(s)	111, 1308, 1643, 1941, 1963, 2169
SfaNI	GCATC	8 cut(s)	331, 540, 964, 1585, 1818, 2301, 2347, 2419
SfcI	CTRYAG	3 cut(s)	292, 2296, 2397
Sfr274I	CTCGAG	1 cut(s)	1763
SlaI	CTCGAG	1 cut(s)	1763
SmiMI	CAYNNNNRTG	1 cut(s)	651
SmlI	CTYRAG	5 cut(s)	1763, 1772, 1919, 2132, 2441
SmoI	CTYRAG	5 cut(s)	1763, 1772, 1919, 2132, 2441
SspI	AATATT	1 cut(s)	818
SspMI	CTAG	4 cut(s)	558, 728, 1670, 2313
SstI	GAGCTC	4 cut(s)	111, 1308, 1941, 2169
StyD4I	CCNGG	2 cut(s)	246, 2406
StyI	CCWWGG	2 cut(s)	1116, 2144
TaaI	ACNGT	2 cut(s)	2003, 2300
TaiI	ACGT	4 cut(s)	180, 736, 1872, 2337
TaqI	TCGA	6 cut(s)	206, 240, 414, 1635, 1764, 2427
TaqII	GACCGA	1 cut(s)	1094
TatI	WGTACW	3 cut(s)	609, 1089, 1677
TauI	GCSGC	4 cut(s)	564, 1601, 1771, 2256
TfiI	GAWTC	9 cut(s)	98, 360, 914, 1346, 1548, 1609, 1632, 1925, 2435
Tru1I	TTAA	8 cut(s)	426, 494, 1035, 1044, 1575, 1773, 2139, 2442
Tru9I	TTAA	8 cut(s)	426, 494, 1035, 1044, 1575, 1773, 2139, 2442
TscAI	CASTG	4 cut(s)	160, 351, 1489, 2310
TseFI	GTSAC	3 cut(s)	1075, 1484, 2029
TseI	GCWGC	7 cut(s)	217, 222, 232, 2221, 2384, 2396, 2399
Tsp45I	GTSAC	3 cut(s)	1075, 1484, 2029
TspGWI	ACGGA	4 cut(s)	13, 389, 833, 1439
TspRI	CASTG	4 cut(s)	160, 351, 1489, 2310
Vha464I	CTTAAG	2 cut(s)	1772, 2441
XagI	CCTNNNNNAGG	1 cut(s)	761
XapI	RAATTY	7 cut(s)	417, 824, 1097, 1178, 1295, 1559, 1859
XceI	RCATGY	1 cut(s)	2116
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1975
XhoI	CTCGAG	1 cut(s)	1763
XmnI	GAANNNNTTC	2 cut(s)	1383, 1559
XspI	CTAG	4 cut(s)	558, 728, 1670, 2313
ZraI	GACGTC	1 cut(s)	178

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.