Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0012005

Physical Location & Seq

Genomic Coordinates Reverse (-)

6933397 .. 6938966

Gene Structure 5570 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00165040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGTAGAAAGAGGAGGAGGTGGTGAAACGATGCCGTCTCGTTTCGCTCCCGATCGCAACAAGGCTTCTCTCCGTCAAGATTGTCCTGCTAAGACCGAGCTTCTCGCGCAATCATCAATCGTCGCCGAGGAAGAGCTTCCAACGTCGAGAGAGAACATTGAAAGAGAACCACGACGAGAAGCGAACAAGCTCATCTCAAATCGGAAATCCTGCATTGCTTTTGTTGCGAATGCAGAGGCAAACTCCGACGAGGTCGTAGATCCACCGAAGGTTGAGGAGAAGATCGGCGCCGTCCCGAATGGCCTATCCACCGATTCTGATGTCGCTAAGAGAGAGGCGGAGTCAATGTCAAAGAGACGCGGCAACGCTCAACAGTTTGAGTTCCAGGCTGAGGTGTCTAGGCTCATGGATATTATTATCCACTCCCTTTATAGTAACAAGGACATTTTCCTCAGGGAGTTGATTTCCAATGCTTCTGATGCGCTGGACAAGATTAGATTCCTTTCCCTCACTGATAAGGAAATTTTGGGTGAAGGTGATAACACTAAGCTTGAAATCCAGATTAAATTAGACAAAGAGAAGAGAATCCTCTCCATACGTGACAGAGGTATAGGTATGACTAAGGAGGACTTGATCAAGAACTTGGGAACTATAGCAAAATCTGGGACTTCAGCGTTCGTTGAGAAGATGCAAACTAGTGGTGATCTTAATCTCATTGGCCAATTTGGAGTTGGGTTTTACTCCGTCTACCTTGTTGCTGATAATGTCGAAGTCATTAGCAAACACAATGATGACAAACAGCATGTTTGGGAGTCGAAGGCTGATGGTTCATTTGTAGTTTCCGAGGATACATATAATGAGCCACTAGGACGTGGTACTGAAATTAGATTGCACCTCAGAGAAGAAGCAGGGGAATATTTGGAAGAAAGCAAGCTAAAAGAGTTGGTGAAGAGATATTCTGAATTTATCAACTTCCCCATCTATATCTGGTCAACCAAAGAGGTTGACGTGGAAGTTCCAGCTGACGAGGAAGACGAATCATCTGAAAGCTCCTCCTCTGAGGAAGAAACTGAAGAGGATGCTGAGAAAACTGAAGATGAAGATGCTGAGAAGAAACCAAAGACAAAGACAGTAAAGGAAACAAATAGTGAATGGGAGCTTCTAAATGACGTTAAAGCAATATGGTTGCGCAATCCAAAAGGAGGTAACCGAAGAAGAGATTTCAGCGAGGACAAGCCTTTGTCATGGAGCCACTTTACCGCTGAAGGTGATGTAGAATTCAAGGCTGTACTGTTTGTTCCTCCTAAGGCTCCTCATGATCTATATGAGAGCTACTATAATGCCAACAAATCCAATTTGAAGTTGTATGGTCTTGTTGATTCAGACACCTTGCCACTCAATGTATCACGAGAAATGCTTCAACAACACAGCAGTTTGAAAACAATCAAGAAAAAACTTATCCGGAAGGCCCTTGATATGATCCGTAAACTCGCTGAAGAAGATCCTGATGAGTCCAATGACAAGGAGAAGAAAGATGGCAAACTGACTTCACTGGATCAGTACATTTCAAGGATGAAATCTGGGCAGAAGGACATATTTTATCTTACTGGAACCAGCAAGGAACAATTGGATAATTCTCCTTTCCTTGAGCGGCTTAAGAAGAAAGGATATGAGGTTATCTTTTTCACCGATCCAGTTGATGAATATTTGATGCAATACTTGATGGATTATGAAGACAAGAAATTCCAGAATGTGTCAAAGGAGGGTTTGAAACTCGGTAAAGACTCAAAAGATAAGGAACTCAAGGAATCATACAAGGAACTCACTAAATGGTGGAAGGGTGCTCTTGCCAGTGACAATGTTGATGATGTGAAGCTGTCCAACCGATTGGCTGACACACCATGCGTGGTTGTTACTTCAAAGTTTGGATGGAGCGCAAACATGGAGAAGATCATGCAGTCTCAGACTTTATCGGATTCTGCCAAGCAAGCATATATGCGCGGCAAGAGGGTACTTGAGATTAATCCAAGGCACCCAATCGTCAAGGAGCTCAGGGAGAGAGTGGTAAAGAACCCTGAGGATGAGAGTGTGAAGCATACAGCACAGCTTATTTACCCAGACTGCACTCATGGAGAGTGGCTTTGCACTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002790 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006970 GO:0008104 GO:0008150 GO:0009266 GO:0009306 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009888 GO:0009934 GO:0009987 GO:0010035 GO:0010038 GO:0010073 GO:0010075 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022603 GO:0030054 GO:0031090 GO:0031974 GO:0032501 GO:0032502 GO:0032940 GO:0033036 GO:0033554 GO:0034976 GO:0040008 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046686 GO:0046903 GO:0048046 GO:0048507 GO:0048509 GO:0048638 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071702 GO:0071705 GO:0071944 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

717

Amino Acids

81.75

Weight (kDa)

5.21

Isoelectric Point (pI)

39.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	150 - 302	1.6e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3	PF13589	152 - 267	2.5e-08	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90	PF00183	305 - 456	1.4e-42	Hsp90 protein
HSP90	PF00183	457 - 501	4.2e-17	Hsp90 protein
HSP90	PF00183	510 - 706	6.4e-79	Hsp90 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24190 AT4G24190
fragaria_vesca	FvH4_2g38300 FvH4_2g38300 FvH4_2g38300
malus_domestica	MD08G1011200.v1.1
prunus_persica	Prupe.1G363900_v2.0.a1 Prupe.1G363900_v2.0.a1
pyrus_communis	pycom08g00990 pycom15g00960 pycom15g00970
rosa_chinensis	RchiOBHm_Chr6g0303071
rosa_laevigata	RLG00000011111
rosa_multiflora	Rmu_ssc0000460.1_g000034
rosa_roxburghii	Rroxscaffold_7G00165040
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG432700 Rh6DG431900
rosa_wichuraiana	Rw6G037510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1190
AccB1I	GGYRCC	2 cut(s)	287, 2031
AccBSI	CCGCTC	1 cut(s)	1651
AccI	GTMKAC	1 cut(s)	747
AccII	CGCG	3 cut(s)	107, 360, 2001
AccIII	TCCGGA	1 cut(s)	1461
AciI	CCGC	5 cut(s)	338, 360, 1260, 1651, 2001
AclWI	GGATC	5 cut(s)	254, 1474, 1496, 1563, 1685
AcoI	YGGCCR	1 cut(s)	718
AcsI	RAATTY	4 cut(s)	522, 962, 1277, 1742
AcuI	CTGAAG	5 cut(s)	654, 1092, 1113, 1284, 1515
AcyI	GRCGYC	1 cut(s)	288
AfaI	GTAC	4 cut(s)	877, 1290, 1562, 2013
AfiI	CCNNNNNNNGG	2 cut(s)	391, 1202
AflII	CTTAAG	1 cut(s)	1655
AgsI	TTSAA	9 cut(s)	161, 554, 1282, 1360, 1421, 1438, 1569, 1771, 1920
AhlI	ACTAGT	1 cut(s)	695
AjiI	CACGTC	2 cut(s)	872, 1009
AjnI	CCWGG	1 cut(s)	384
Alw21I	GWGCWC	2 cut(s)	1846, 2052
Alw26I	GTCTC	3 cut(s)	42, 349, 1965
AlwI	GGATC	5 cut(s)	254, 1474, 1496, 1563, 1685
Aor13HI	TCCGGA	1 cut(s)	1461
AoxI	GGCC	3 cut(s)	301, 718, 1467
ApoI	RAATTY	4 cut(s)	522, 962, 1277, 1742
AseI	ATTAAT	1 cut(s)	2022
Asp700I	GAANNNNTTC	2 cut(s)	135, 1416
AspLEI	GCGC	6 cut(s)	109, 290, 484, 1191, 1937, 2001
AspS9I	GGNCC	1 cut(s)	1468
AsuHPI	GGTGA	7 cut(s)	35, 542, 548, 713, 958, 1280, 1678
AxyI	CCTNAGG	3 cut(s)	452, 1305, 2076
BalI	TGGCCA	1 cut(s)	720
BanI	GGYRCC	2 cut(s)	287, 2031
BanII	GRGCYC	1 cut(s)	2052
BauI	CACGAG	1 cut(s)	1407
BbsI	GAAGAC	2 cut(s)	1038, 1740
Bbv12I	GWGCWC	2 cut(s)	1846, 2052
BbvCI	CCTCAGC	1 cut(s)	390
BccI	CCATC	5 cut(s)	818, 986, 1529, 1717, 1923
BceAI	ACGGC	2 cut(s)	19, 275
BciT130I	CCWGG	1 cut(s)	386
BciVI	GTATCC	1 cut(s)	841
BclI	TGATCA	1 cut(s)	633
BcoDI	GTCTC	3 cut(s)	42, 349, 1965
BcuI	ACTAGT	1 cut(s)	695
BfaI	CTAG	3 cut(s)	399, 696, 866
BfmI	CTRYAG	1 cut(s)	651
BfoI	RGCGCY	1 cut(s)	291
BfrI	CTTAAG	1 cut(s)	1655
BfuI	GTATCC	1 cut(s)	841
BisI	GCNGC	3 cut(s)	361, 1652, 2002
BlsI	GCNGC	3 cut(s)	362, 1653, 2003
Bme1390I	CCNGG	1 cut(s)	386
BmgBI	CACGTC	2 cut(s)	872, 1009
BmgT120I	GGNCC	1 cut(s)	1468
BmiI	GGNNCC	5 cut(s)	289, 1250, 1311, 1612, 2033
BmrFI	CCNGG	1 cut(s)	386
BmsI	GCATC	6 cut(s)	21, 469, 678, 1069, 1093, 1701
BpiI	GAAGAC	2 cut(s)	1038, 1740
BplI	GAGNNNNNCTC	2 cut(s)	227, 259
Bpu10I	CCTNAGC	2 cut(s)	390, 2051
BpuEI	CTTGAG	3 cut(s)	1667, 1787, 2036
BsaAI	YACGTR	1 cut(s)	599
BsaBI	GATNNNNATC	1 cut(s)	708
BsaHI	GRCGYC	1 cut(s)	288
BsaJI	CCNNGG	3 cut(s)	126, 843, 2027
BsaWI	WCCGGW	1 cut(s)	1461
BsaXI	ACNNNNNCTCC	2 cut(s)	332, 362
Bsc4I	CCNNNNNNNGG	2 cut(s)	391, 1202
Bse1I	ACTGG	4 cut(s)	1557, 1612, 1694, 1851
Bse21I	CCTNAGG	3 cut(s)	452, 1305, 2076
Bse3DI	GCAATG	1 cut(s)	213
Bse8I	GATNNNNATC	1 cut(s)	708
BseAI	TCCGGA	1 cut(s)	1461
BseBI	CCWGG	1 cut(s)	386
BseDI	CCNNGG	3 cut(s)	126, 843, 2027
BseGI	GGATG	4 cut(s)	1084, 1578, 1934, 2086
BseJI	GATNNNNATC	1 cut(s)	708
BseLI	CCNNNNNNNGG	2 cut(s)	391, 1202
BseMI	GCAATG	1 cut(s)	213
BseMII	CTCAG	9 cut(s)	381, 466, 910, 1050, 1074, 1098, 1976, 2065, 2067
BseNI	ACTGG	4 cut(s)	1557, 1612, 1694, 1851
BseRI	GAGGAG	6 cut(s)	27, 30, 290, 1042, 1045, 1302
BsgI	GTGCAG	1 cut(s)	2107
Bsh1236I	CGCG	3 cut(s)	107, 360, 2001
Bsh1285I	CGRYCG	1 cut(s)	55
BshFI	GGCC	3 cut(s)	303, 720, 1469
BshNI	GGYRCC	2 cut(s)	287, 2031
BsiEI	CGRYCG	1 cut(s)	55
BsiHKAI	GWGCWC	2 cut(s)	1846, 2052
BsiSI	CCGG	1 cut(s)	1462
BslFI	GGGAC	2 cut(s)	278, 679
BslI	CCNNNNNNNGG	2 cut(s)	391, 1202
BsmAI	GTCTC	3 cut(s)	42, 349, 1965
BsmBI	CGTCTC	2 cut(s)	42, 349
BsmFI	GGGAC	2 cut(s)	278, 679
BsmI	GAATGC	1 cut(s)	235
BsnI	GGCC	3 cut(s)	303, 720, 1469
Bsp1286I	GDGCHC	2 cut(s)	1846, 2052
Bsp13I	TCCGGA	1 cut(s)	1461
BspACI	CCGC	5 cut(s)	338, 360, 1260, 1651, 2001
BspANI	GGCC	3 cut(s)	303, 720, 1469
BspCNI	CTCAG	9 cut(s)	382, 465, 909, 1051, 1075, 1099, 1975, 2064, 2068
BspEI	TCCGGA	1 cut(s)	1461
BspFNI	CGCG	3 cut(s)	107, 360, 2001
BspHI	TCATGA	1 cut(s)	1315
BspLI	GGNNCC	5 cut(s)	289, 1250, 1311, 1612, 2033
BspPI	GGATC	5 cut(s)	254, 1474, 1496, 1563, 1685
BspQI	GCTCTTC	1 cut(s)	126
BspT107I	GGYRCC	2 cut(s)	287, 2031
BspTI	CTTAAG	1 cut(s)	1655
BsrBI	CCGCTC	1 cut(s)	1651
BsrDI	GCAATG	1 cut(s)	213
BsrI	ACTGG	4 cut(s)	1557, 1612, 1694, 1851
BssECI	CCNNGG	3 cut(s)	126, 843, 2027
BssNI	GRCGYC	1 cut(s)	288
BssSI	CACGAG	1 cut(s)	1407
BssT1I	CCWWGG	1 cut(s)	2027
Bst2BI	CACGAG	1 cut(s)	1407
Bst2UI	CCWGG	1 cut(s)	386
Bst4CI	ACNGT	3 cut(s)	375, 1132, 1293
Bst6I	CTCTTC	5 cut(s)	126, 575, 944, 1068, 1210
BstACI	GRCGYC	1 cut(s)	288
BstAFI	CTTAAG	1 cut(s)	1655
BstBAI	YACGTR	1 cut(s)	599
BstC8I	GCNNGC	2 cut(s)	932, 1989
BstEII	GGTNACC	1 cut(s)	1205
BstF5I	GGATG	4 cut(s)	1084, 1578, 1934, 2086
BstFNI	CGCG	3 cut(s)	107, 360, 2001
BstH2I	RGCGCY	1 cut(s)	291
BstHHI	GCGC	6 cut(s)	109, 290, 484, 1191, 1937, 2001
BstMAI	GTCTC	3 cut(s)	42, 349, 1965
BstMCI	CGRYCG	1 cut(s)	55
BstMWI	GCNNNNNNNGC	4 cut(s)	106, 224, 479, 1988
BstNI	CCWGG	1 cut(s)	386
BstNSI	RCATGY	1 cut(s)	806
BstPI	GGTNACC	1 cut(s)	1205
BstSCI	CCNGG	1 cut(s)	384
BstSFI	CTRYAG	1 cut(s)	651
BstUI	CGCG	3 cut(s)	107, 360, 2001
BstV2I	GAAGAC	2 cut(s)	1038, 1740
BstX2I	RGATCY	2 cut(s)	259, 1501
BstXI	CCANNNNNNTGG	1 cut(s)	1888
BstYI	RGATCY	2 cut(s)	259, 1501
Bsu36I	CCTNAGG	3 cut(s)	452, 1305, 2076
BsuI	GTATCC	1 cut(s)	841
BsuRI	GGCC	3 cut(s)	303, 720, 1469
BtrI	CACGTC	2 cut(s)	872, 1009
BtsCI	GGATG	4 cut(s)	1084, 1578, 1934, 2086
BtsIMutI	CAGTG	3 cut(s)	510, 1550, 1858
Cac8I	GCNNGC	2 cut(s)	932, 1989
CciI	TCATGA	1 cut(s)	1315
CfoI	GCGC	6 cut(s)	109, 290, 484, 1191, 1937, 2001
Cfr13I	GGNCC	1 cut(s)	1468
CseI	GACGC	1 cut(s)	366
Csp6I	GTAC	4 cut(s)	876, 1289, 1561, 2012
CviAII	CATG	8 cut(s)	406, 803, 1245, 1316, 1902, 1942, 1954, 2129
CviQI	GTAC	4 cut(s)	876, 1289, 1561, 2012
DinI	GGCGCC	1 cut(s)	289
EaeI	YGGCCR	1 cut(s)	718
Eam1104I	CTCTTC	5 cut(s)	126, 575, 944, 1068, 1210
EarI	CTCTTC	5 cut(s)	126, 575, 944, 1068, 1210
EciI	GGCGGA	1 cut(s)	353
Ecl136II	GAGCTC	1 cut(s)	2050
Eco130I	CCWWGG	1 cut(s)	2027
Eco24I	GRGCYC	1 cut(s)	2052
Eco53kI	GAGCTC	1 cut(s)	2050
Eco57I	CTGAAG	5 cut(s)	654, 1092, 1113, 1284, 1515
Eco81I	CCTNAGG	3 cut(s)	452, 1305, 2076
Eco91I	GGTNACC	1 cut(s)	1205
EcoICRI	GAGCTC	1 cut(s)	2050
EcoO109I	RGGNCCY	1 cut(s)	1468
EcoO65I	GGTNACC	1 cut(s)	1205
EcoRI	GAATTC	1 cut(s)	1277
EcoRII	CCWGG	1 cut(s)	384
EcoT14I	CCWWGG	1 cut(s)	2027
EcoT38I	GRGCYC	1 cut(s)	2052
EgeI	GGCGCC	1 cut(s)	289
EheI	GGCGCC	1 cut(s)	289
ErhI	CCWWGG	1 cut(s)	2027
Esp3I	CGTCTC	2 cut(s)	42, 349
FaeI	CATG	8 cut(s)	409, 806, 1248, 1319, 1905, 1945, 1957, 2132
FalI	AAGNNNNNCTT	2 cut(s)	614, 646
FaqI	GGGAC	2 cut(s)	278, 679
FatI	CATG	8 cut(s)	405, 802, 1244, 1315, 1901, 1941, 1953, 2128
FbaI	TGATCA	1 cut(s)	633
FblI	GTMKAC	1 cut(s)	747
Fnu4HI	GCNGC	3 cut(s)	361, 1652, 2002
FokI	GGATG	4 cut(s)	1091, 1585, 1941, 2093
FriOI	GRGCYC	1 cut(s)	2052
Fsp4HI	GCNGC	3 cut(s)	361, 1652, 2002
FspBI	CTAG	3 cut(s)	399, 696, 866
FspI	TGCGCA	1 cut(s)	1190
GlaI	GCGC	6 cut(s)	108, 289, 483, 1190, 1936, 2000
GluI	GCNGC	3 cut(s)	361, 1652, 2002
HaeII	RGCGCY	1 cut(s)	291
HaeIII	GGCC	3 cut(s)	303, 720, 1469
HapII	CCGG	1 cut(s)	1462
HgaI	GACGC	1 cut(s)	366
HhaI	GCGC	6 cut(s)	109, 290, 484, 1191, 1937, 2001
Hin1I	GRCGYC	1 cut(s)	288
Hin1II	CATG	8 cut(s)	409, 806, 1248, 1319, 1905, 1945, 1957, 2132
Hin6I	GCGC	6 cut(s)	107, 288, 482, 1189, 1935, 1999
HinP1I	GCGC	6 cut(s)	107, 288, 482, 1189, 1935, 1999
HincII	GTYRAC	2 cut(s)	993, 1006
HindII	GTYRAC	2 cut(s)	993, 1006
HindIII	AAGCTT	1 cut(s)	548
HpaII	CCGG	1 cut(s)	1462
HphI	GGTGA	7 cut(s)	35, 542, 548, 713, 958, 1280, 1678
Hpy166II	GTNNAC	4 cut(s)	748, 993, 1006, 1487
Hpy8I	GTNNAC	4 cut(s)	748, 993, 1006, 1487
Hpy99I	CGWCG	4 cut(s)	125, 148, 177, 251
HpyAV	CCTTC	7 cut(s)	262, 527, 811, 1259, 1459, 1582, 1831
HpyCH4III	ACNGT	3 cut(s)	375, 1132, 1293
HpyCH4IV	ACGT	5 cut(s)	143, 598, 871, 1008, 1170
HpyCH4V	TGCA	8 cut(s)	213, 233, 691, 892, 1714, 1957, 2124, 2145
HpyF10VI	GCNNNNNNNGC	4 cut(s)	106, 224, 479, 1988
HpySE526I	ACGT	5 cut(s)	143, 598, 871, 1008, 1170
Hsp92I	GRCGYC	1 cut(s)	288
Hsp92II	CATG	8 cut(s)	409, 806, 1248, 1319, 1905, 1945, 1957, 2132
HspAI	GCGC	6 cut(s)	107, 288, 482, 1189, 1935, 1999
KasI	GGCGCC	1 cut(s)	287
Kpn2I	TCCGGA	1 cut(s)	1461
Ksp22I	TGATCA	1 cut(s)	633
LguI	GCTCTTC	1 cut(s)	126
LmnI	GCTCC	7 cut(s)	52, 1055, 1156, 1248, 1315, 1932, 2047
LweI	GCATC	6 cut(s)	21, 469, 678, 1069, 1093, 1701
MaeI	CTAG	3 cut(s)	399, 696, 866
MaeII	ACGT	5 cut(s)	143, 598, 871, 1008, 1170
MaeIII	GTNAC	5 cut(s)	434, 599, 1205, 1853, 1912
MbiI	CCGCTC	1 cut(s)	1651
MfeI	CAATTG	1 cut(s)	1625
MflI	RGATCY	2 cut(s)	259, 1501
MhlI	GDGCHC	2 cut(s)	1846, 2052
MlsI	TGGCCA	1 cut(s)	720
MluNI	TGGCCA	1 cut(s)	720
Mly113I	GGCGCC	1 cut(s)	288
MlyI	GAGTC	4 cut(s)	350, 821, 1520, 1778
MmeI	TCCRAC	3 cut(s)	164, 270, 1905
Mox20I	TGGCCA	1 cut(s)	720
MroI	TCCGGA	1 cut(s)	1461
MroXI	GAANNNNTTC	2 cut(s)	135, 1416
MscI	TGGCCA	1 cut(s)	720
MseI	TTAA	5 cut(s)	564, 708, 1173, 1656, 2022
MslI	CAYNNNNRTG	1 cut(s)	789
Msp20I	TGGCCA	1 cut(s)	720
MspA1I	CMGCKG	2 cut(s)	1022, 1262
MspCI	CTTAAG	1 cut(s)	1655
MspI	CCGG	1 cut(s)	1462
MspR9I	CCNGG	1 cut(s)	386
MunI	CAATTG	1 cut(s)	1625
Mva1269I	GAATGC	1 cut(s)	235
MvaI	CCWGG	1 cut(s)	386
MvnI	CGCG	3 cut(s)	107, 360, 2001
MwoI	GCNNNNNNNGC	4 cut(s)	106, 224, 479, 1988
NarI	GGCGCC	1 cut(s)	288
NlaIII	CATG	8 cut(s)	409, 806, 1248, 1319, 1905, 1945, 1957, 2132
NlaIV	GGNNCC	5 cut(s)	289, 1250, 1311, 1612, 2033
NmeAIII	GCCGAG	1 cut(s)	151
NmuCI	GTSAC	2 cut(s)	599, 1853
NsbI	TGCGCA	1 cut(s)	1190
NspI	RCATGY	1 cut(s)	806
PagI	TCATGA	1 cut(s)	1315
PciSI	GCTCTTC	1 cut(s)	126
PcsI	WCGNNNNNNNCGW	1 cut(s)	1032
PctI	GAATGC	1 cut(s)	235
PdmI	GAANNNNTTC	2 cut(s)	135, 1416
PfeI	GAWTC	7 cut(s)	314, 498, 585, 1037, 1379, 1808, 1976
PflFI	GACNNNGTC	1 cut(s)	251
PkrI	GCNGC	3 cut(s)	362, 1653, 2003
Ple19I	CGATCG	1 cut(s)	55
PleI	GAGTC	4 cut(s)	349, 820, 1519, 1778
PluTI	GGCGCC	1 cut(s)	291
PpsI	GAGTC	4 cut(s)	349, 820, 1519, 1778
Ppu21I	YACGTR	1 cut(s)	599
PshBI	ATTAAT	1 cut(s)	2022
Psp124BI	GAGCTC	1 cut(s)	2052
Psp6I	CCWGG	1 cut(s)	384
PspEI	GGTNACC	1 cut(s)	1205
PspGI	CCWGG	1 cut(s)	384
PspN4I	GGNNCC	5 cut(s)	289, 1250, 1311, 1612, 2033
PspPI	GGNCC	1 cut(s)	1468
PsrI	GAACNNNNNNTAC	2 cut(s)	1281, 1313
PsuI	RGATCY	2 cut(s)	259, 1501
PsyI	GACNNNGTC	1 cut(s)	251
PvuI	CGATCG	1 cut(s)	55
PvuII	CAGCTG	1 cut(s)	1022
RsaI	GTAC	4 cut(s)	877, 1290, 1562, 2013
RsaNI	GTAC	4 cut(s)	876, 1289, 1561, 2012
RseI	CAYNNNNRTG	1 cut(s)	789
SacI	GAGCTC	1 cut(s)	2052
SapI	GCTCTTC	1 cut(s)	126
SaqAI	TTAA	5 cut(s)	564, 708, 1173, 1656, 2022
SatI	GCNGC	3 cut(s)	361, 1652, 2002
Sau96I	GGNCC	1 cut(s)	1468
SchI	GAGTC	4 cut(s)	350, 821, 1520, 1778
ScrFI	CCNGG	1 cut(s)	386
SduI	GDGCHC	2 cut(s)	1846, 2052
SfaNI	GCATC	6 cut(s)	21, 469, 678, 1069, 1093, 1701
SfcI	CTRYAG	1 cut(s)	651
SfoI	GGCGCC	1 cut(s)	289
SmiMI	CAYNNNNRTG	1 cut(s)	789
SmlI	CTYRAG	4 cut(s)	1646, 1655, 1802, 2015
SmoI	CTYRAG	4 cut(s)	1646, 1655, 1802, 2015
SpeI	ACTAGT	1 cut(s)	695
SsiI	CCGC	5 cut(s)	338, 360, 1260, 1651, 2001
SspDI	GGCGCC	1 cut(s)	287
SspI	AATATT	2 cut(s)	917, 1706
SspMI	CTAG	3 cut(s)	399, 696, 866
SstI	GAGCTC	1 cut(s)	2052
StyD4I	CCNGG	1 cut(s)	384
StyI	CCWWGG	1 cut(s)	2027
TaaI	ACNGT	3 cut(s)	375, 1132, 1293
TaiI	ACGT	5 cut(s)	146, 601, 874, 1011, 1173
TaqI	TCGA	3 cut(s)	146, 768, 815
TaqII	GACCGA	1 cut(s)	110
TatI	WGTACW	2 cut(s)	1288, 1560
TauI	GCSGC	3 cut(s)	363, 1654, 2004
TfiI	GAWTC	7 cut(s)	314, 498, 585, 1037, 1379, 1808, 1976
Tru1I	TTAA	5 cut(s)	564, 708, 1173, 1656, 2022
Tru9I	TTAA	5 cut(s)	564, 708, 1173, 1656, 2022
TscAI	CASTG	3 cut(s)	517, 1557, 1858
TseFI	GTSAC	2 cut(s)	599, 1853
Tsp45I	GTSAC	2 cut(s)	599, 1853
TspDTI	ATGAA	5 cut(s)	819, 1113, 1589, 1716, 1746
TspGWI	ACGGA	3 cut(s)	62, 733, 1472
TspRI	CASTG	3 cut(s)	517, 1557, 1858
Tth111I	GACNNNGTC	1 cut(s)	251
Vha464I	CTTAAG	1 cut(s)	1655
VspI	ATTAAT	1 cut(s)	2022
XapI	RAATTY	4 cut(s)	522, 962, 1277, 1742
XceI	RCATGY	1 cut(s)	806
XcmI	CCANNNNNNNNNTGG	1 cut(s)	728
XmiI	GTMKAC	1 cut(s)	747
XmnI	GAANNNNTTC	2 cut(s)	135, 1416
XspI	CTAG	3 cut(s)	399, 696, 866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.