Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0012005

Physical Location & Seq

Genomic Coordinates Forward (+)

61103208 .. 61108071

Gene Structure 4864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG431900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGAGGAAGTGGACGATCCCTTCTGTTCTGCTTCTGCTGTGCCTTCTCTCTCTTCTCCCAGATCAAGGACGGAAATTACAGGCGAATGCAGAGGCAAACTCCGACGAGGTTGTAGATCCACCGAAGGTTGAGGAGAAGATCGGCGCCGTCCCGAATGGGCTATCCACCGATTCTGATGTCGCTAAGAGAGAGGCGGAGTCAATGTCAAAGAGACGCGGCAACGCTCAACAGTTTGAGTTCCAGGCTGAGGTGTCTAGGCTCATGGATATTATTATCCACTCCCTTTATAGTAACAAGGACATTTTCCTCAGGGAGTTGATTTCCAATGCTTCTGATGCGCTGGACAAGATTAGATTCCTTTCCCTCACTGATAAGGAAATTTTGGGTGAAGGTGATAACACTAAGCTTGAAATCCAGATTAAATTAGACAAAGAGAAGAGAATCCTCTCCATACGTGACAGAGGTATAGGTATGACTAAGGAGGACTTGATCAAGAACTTGGGAACTATAGCAAAATCTGGGACTTCAGCGTTCGTTGAGAAGATGCAGACTAGTGGTGATCTTAATCTCATTGGGCAATTTGGAGTTGGGTTTTACTCCGTCTACCTTGTTGCTGATAATGTCGAAGTCATTAGCAAACACAATGATGACAAACAGCATGTTTGGGAGTCGAAGGCTGATGGTTCATTTGTAGTTTCCGAGGATACATATAATGAGCCACTAGGACGTGGTACTGAAATTAGATTGCACCTCAGAGAAGAAGCAGGGGAATATTTGGAAGAAAGCAAGCTAAAAGAGTTGGTGAAGAGATATTCTGAATTTATCAACTTCCCCATCTATATCTGGTCAACCAAAGAGGTTGACGTGGAAGTTCCAGCCGACGAGGAAGAGGAATCATCTGAAAGCTCCTCCTCTGAGGAAGAAACTGAAGAGGATGCTGAGAAAACTGAAGATGAAGATGCTGAGAAGAAACCAAAGACAAAGACAGTAAAGGAAACAAATAGTGAATGGGAGCTTCTAAATGACGTTAAAGCAATATGGTTGCGCAATCCAAAGGAGGTAACCGAAGAAGAGTACGCCAAATTCTATCAGACCCTTGCCAAGGATTTCAGCGAGGACAAGCCTTTGTCATGGAGCCACTTTACCGCTGAAGGTGATGTAGAATTCAAGGCTGTACTGTTCGTTCCTCCCAAGGCTCCTCATGATCTATATGAGAGCTACTATAATGCCAACAAATCCAATTTGAAGTTGTATGTTCGAAGAGTTTTCATATCAGATGAATTCGATGAGCTTTTGCCAAAGTATCTGAACTTTTTGAAGGGTCTTGTTGATTCTGACACCTTGCCACTCAATGTATCACGAGAAATGCTTCAACAACACAGCAGTTTGAAAACAATCAAGAAAAAACTTATCCGGAAGGCCCTTGATATGATCCGTAAACTCGCTGAAGAAGATCCTGATGAGTCCAATGACAAAGAGAAGAAAGATGTTGAGAAGTCCGATGATGATGAGAAGAGAGGCCAATATACAAGATTCTGGAATGAATTTGGCAAGTCTATTAAACTTGGTATTATTGAAGATGCGGCCAACAGAAACCGTTTGGCAAAACTTTTAAGATTTGAGAGGTATTTATGTTATATTGATATGATTTTGTGTTTTCTGCTAGTTCCAATATTTAGTCTAAAAAATTTGGATCCCTTTTCCTTTAATCCTTGCATGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002790 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006970 GO:0008104 GO:0008150 GO:0009266 GO:0009306 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009888 GO:0009934 GO:0009987 GO:0010035 GO:0010038 GO:0010073 GO:0010075 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022603 GO:0030054 GO:0031090 GO:0031974 GO:0032501 GO:0032502 GO:0032940 GO:0033036 GO:0033554 GO:0034976 GO:0040008 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046686 GO:0046903 GO:0048046 GO:0048507 GO:0048509 GO:0048638 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071702 GO:0071705 GO:0071944 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

574

Amino Acids

65.97

Weight (kDa)

4.93

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	102 - 254	1.1e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3	PF13589	103 - 219	1.7e-08	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90	PF00183	257 - 541	5.4e-114	Hsp90 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24190 AT4G24190
fragaria_vesca	FvH4_2g38300 FvH4_2g38300 FvH4_2g38300
malus_domestica	MD08G1011200.v1.1
prunus_persica	Prupe.1G363900_v2.0.a1 Prupe.1G363900_v2.0.a1
pyrus_communis	pycom08g00990 pycom15g00960 pycom15g00970
rosa_chinensis	RchiOBHm_Chr6g0303071
rosa_laevigata	RLG00000011111
rosa_multiflora	Rmu_ssc0000460.1_g000034
rosa_roxburghii	Rroxscaffold_7G00165040
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG432700 Rh6DG431900
rosa_wichuraiana	Rw6G037510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1046
AccB1I	GGYRCC	1 cut(s)	143
AccI	GTMKAC	1 cut(s)	603
AccII	CGCG	1 cut(s)	216
AccIII	TCCGGA	1 cut(s)	1413
AciI	CCGC	4 cut(s)	194, 216, 1146, 1583
AclWI	GGATC	6 cut(s)	10, 110, 1426, 1448, 1688, 1701
AcoI	YGGCCR	1 cut(s)	1584
AcsI	RAATTY	7 cut(s)	378, 818, 1082, 1163, 1280, 1544, 1687
AcuI	CTGAAG	5 cut(s)	510, 948, 969, 1170, 1467
AcyI	GRCGYC	1 cut(s)	144
AfaI	GTAC	3 cut(s)	733, 1076, 1176
AfiI	CCNNNNNNNGG	4 cut(s)	65, 247, 1102, 1718
AgsI	TTSAA	7 cut(s)	410, 1168, 1246, 1318, 1373, 1390, 1577
AhlI	ACTAGT	1 cut(s)	551
AjiI	CACGTC	2 cut(s)	728, 865
AjnI	CCWGG	1 cut(s)	240
AluBI	AGCT	6 cut(s)	406, 790, 906, 1015, 1218, 1291
AluI	AGCT	6 cut(s)	406, 790, 906, 1015, 1218, 1291
Alw26I	GTCTC	1 cut(s)	205
AlwI	GGATC	6 cut(s)	10, 110, 1426, 1448, 1688, 1701
Aor13HI	TCCGGA	1 cut(s)	1413
AoxI	GGCC	3 cut(s)	1419, 1519, 1584
ApoI	RAATTY	7 cut(s)	378, 818, 1082, 1163, 1280, 1544, 1687
Asp700I	GAANNNNTTC	1 cut(s)	1368
AspLEI	GCGC	3 cut(s)	146, 340, 1047
AspS9I	GGNCC	1 cut(s)	1420
AsuHPI	GGTGA	5 cut(s)	398, 404, 569, 814, 1166
AsuII	TTCGAA	1 cut(s)	1258
AxyI	CCTNAGG	1 cut(s)	308
BamHI	GGATCC	1 cut(s)	1693
BanI	GGYRCC	1 cut(s)	143
BauI	CACGAG	1 cut(s)	1359
BbvCI	CCTCAGC	1 cut(s)	246
BccI	CCATC	2 cut(s)	674, 842
BceAI	ACGGC	1 cut(s)	131
BciT130I	CCWGG	1 cut(s)	242
BciVI	GTATCC	1 cut(s)	697
BclI	TGATCA	1 cut(s)	489
BcoDI	GTCTC	1 cut(s)	205
BcuI	ACTAGT	1 cut(s)	551
BfaI	CTAG	4 cut(s)	255, 552, 722, 1664
BfmI	CTRYAG	1 cut(s)	507
BfoI	RGCGCY	1 cut(s)	147
BfuI	GTATCC	1 cut(s)	697
BisI	GCNGC	2 cut(s)	217, 1584
BlsI	GCNGC	2 cut(s)	218, 1585
Bme1390I	CCNGG	1 cut(s)	242
BmgBI	CACGTC	2 cut(s)	728, 865
BmgT120I	GGNCC	1 cut(s)	1420
BmiI	GGNNCC	4 cut(s)	145, 1136, 1197, 1695
BmrFI	CCNGG	1 cut(s)	242
BmsI	GCATC	5 cut(s)	325, 534, 925, 949, 1570
BplI	GAGNNNNNCTC	2 cut(s)	83, 115
Bpu10I	CCTNAGC	1 cut(s)	246
Bpu14I	TTCGAA	1 cut(s)	1258
BsaAI	YACGTR	1 cut(s)	455
BsaBI	GATNNNNATC	1 cut(s)	564
BsaHI	GRCGYC	1 cut(s)	144
BsaJI	CCNNGG	3 cut(s)	699, 1101, 1191
BsaWI	WCCGGW	1 cut(s)	1413
BsaXI	ACNNNNNCTCC	2 cut(s)	188, 218
Bsc4I	CCNNNNNNNGG	4 cut(s)	65, 247, 1102, 1718
Bse21I	CCTNAGG	1 cut(s)	308
Bse8I	GATNNNNATC	1 cut(s)	564
BseAI	TCCGGA	1 cut(s)	1413
BseBI	CCWGG	1 cut(s)	242
BseDI	CCNNGG	3 cut(s)	699, 1101, 1191
BseGI	GGATG	1 cut(s)	940
BseJI	GATNNNNATC	1 cut(s)	564
BseLI	CCNNNNNNNGG	4 cut(s)	65, 247, 1102, 1718
BseMII	CTCAG	6 cut(s)	237, 322, 766, 906, 930, 954
BseRI	GAGGAG	4 cut(s)	146, 898, 901, 1188
Bsh1236I	CGCG	1 cut(s)	216
BshFI	GGCC	3 cut(s)	1421, 1521, 1586
BshNI	GGYRCC	1 cut(s)	143
BsiSI	CCGG	1 cut(s)	1414
BslFI	GGGAC	2 cut(s)	134, 535
BslI	CCNNNNNNNGG	4 cut(s)	65, 247, 1102, 1718
BsmAI	GTCTC	1 cut(s)	205
BsmBI	CGTCTC	1 cut(s)	205
BsmFI	GGGAC	2 cut(s)	134, 535
BsmI	GAATGC	1 cut(s)	91
BsnI	GGCC	3 cut(s)	1421, 1521, 1586
Bsp119I	TTCGAA	1 cut(s)	1258
Bsp13I	TCCGGA	1 cut(s)	1413
BspACI	CCGC	4 cut(s)	194, 216, 1146, 1583
BspANI	GGCC	3 cut(s)	1421, 1521, 1586
BspCNI	CTCAG	6 cut(s)	238, 321, 765, 907, 931, 955
BspEI	TCCGGA	1 cut(s)	1413
BspFNI	CGCG	1 cut(s)	216
BspHI	TCATGA	1 cut(s)	1201
BspLI	GGNNCC	4 cut(s)	145, 1136, 1197, 1695
BspPI	GGATC	6 cut(s)	10, 110, 1426, 1448, 1688, 1701
BspT104I	TTCGAA	1 cut(s)	1258
BspT107I	GGYRCC	1 cut(s)	143
BssECI	CCNNGG	3 cut(s)	699, 1101, 1191
BssNI	GRCGYC	1 cut(s)	144
BssSI	CACGAG	1 cut(s)	1359
BssT1I	CCWWGG	2 cut(s)	1101, 1191
Bst2BI	CACGAG	1 cut(s)	1359
Bst2UI	CCWGG	1 cut(s)	242
Bst4CI	ACNGT	4 cut(s)	231, 988, 1179, 1598
Bst6I	CTCTTC	8 cut(s)	57, 431, 800, 882, 924, 1065, 1255, 1508
BstACI	GRCGYC	1 cut(s)	144
BstBAI	YACGTR	1 cut(s)	455
BstBI	TTCGAA	1 cut(s)	1258
BstC8I	GCNNGC	1 cut(s)	788
BstDEI	CTNAG	9 cut(s)	183, 246, 308, 402, 477, 752, 915, 939, 963
BstEII	GGTNACC	1 cut(s)	1060
BstENI	CCTNNNNNAGG	1 cut(s)	1100
BstF5I	GGATG	1 cut(s)	940
BstFNI	CGCG	1 cut(s)	216
BstH2I	RGCGCY	1 cut(s)	147
BstHHI	GCGC	3 cut(s)	146, 340, 1047
BstMAI	GTCTC	1 cut(s)	205
BstMWI	GCNNNNNNNGC	1 cut(s)	335
BstNI	CCWGG	1 cut(s)	242
BstNSI	RCATGY	1 cut(s)	662
BstPI	GGTNACC	1 cut(s)	1060
BstSCI	CCNGG	1 cut(s)	240
BstSFI	CTRYAG	1 cut(s)	507
BstUI	CGCG	1 cut(s)	216
BstX2I	RGATCY	3 cut(s)	115, 1453, 1693
BstYI	RGATCY	3 cut(s)	115, 1453, 1693
Bsu36I	CCTNAGG	1 cut(s)	308
BsuI	GTATCC	1 cut(s)	697
BsuRI	GGCC	3 cut(s)	1421, 1521, 1586
BtrI	CACGTC	2 cut(s)	728, 865
BtsCI	GGATG	1 cut(s)	940
BtsIMutI	CAGTG	1 cut(s)	366
Cac8I	GCNNGC	1 cut(s)	788
CciI	TCATGA	1 cut(s)	1201
CfoI	GCGC	3 cut(s)	146, 340, 1047
Cfr13I	GGNCC	1 cut(s)	1420
CseI	GACGC	1 cut(s)	222
Csp6I	GTAC	3 cut(s)	732, 1075, 1175
CviAII	CATG	5 cut(s)	262, 659, 1131, 1202, 1717
CviQI	GTAC	3 cut(s)	732, 1075, 1175
DdeI	CTNAG	9 cut(s)	183, 246, 308, 402, 477, 752, 915, 939, 963
DinI	GGCGCC	1 cut(s)	145
EaeI	YGGCCR	1 cut(s)	1584
Eam1104I	CTCTTC	8 cut(s)	57, 431, 800, 882, 924, 1065, 1255, 1508
EarI	CTCTTC	8 cut(s)	57, 431, 800, 882, 924, 1065, 1255, 1508
EciI	GGCGGA	1 cut(s)	209
Eco130I	CCWWGG	2 cut(s)	1101, 1191
Eco57I	CTGAAG	5 cut(s)	510, 948, 969, 1170, 1467
Eco81I	CCTNAGG	1 cut(s)	308
Eco91I	GGTNACC	1 cut(s)	1060
EcoNI	CCTNNNNNAGG	1 cut(s)	1100
EcoO109I	RGGNCCY	1 cut(s)	1420
EcoO65I	GGTNACC	1 cut(s)	1060
EcoRI	GAATTC	2 cut(s)	1163, 1280
EcoRII	CCWGG	1 cut(s)	240
EcoT14I	CCWWGG	2 cut(s)	1101, 1191
EgeI	GGCGCC	1 cut(s)	145
EheI	GGCGCC	1 cut(s)	145
ErhI	CCWWGG	2 cut(s)	1101, 1191
Esp3I	CGTCTC	1 cut(s)	205
FaeI	CATG	5 cut(s)	265, 662, 1134, 1205, 1720
FalI	AAGNNNNNCTT	2 cut(s)	470, 502
FaqI	GGGAC	2 cut(s)	134, 535
FatI	CATG	5 cut(s)	261, 658, 1130, 1201, 1716
FbaI	TGATCA	1 cut(s)	489
FblI	GTMKAC	1 cut(s)	603
Fnu4HI	GCNGC	2 cut(s)	217, 1584
FokI	GGATG	1 cut(s)	947
Fsp4HI	GCNGC	2 cut(s)	217, 1584
FspBI	CTAG	4 cut(s)	255, 552, 722, 1664
FspI	TGCGCA	1 cut(s)	1046
GlaI	GCGC	3 cut(s)	145, 339, 1046
GluI	GCNGC	2 cut(s)	217, 1584
HaeII	RGCGCY	1 cut(s)	147
HaeIII	GGCC	3 cut(s)	1421, 1521, 1586
HapII	CCGG	1 cut(s)	1414
HgaI	GACGC	1 cut(s)	222
HhaI	GCGC	3 cut(s)	146, 340, 1047
Hin1I	GRCGYC	1 cut(s)	144
Hin1II	CATG	5 cut(s)	265, 662, 1134, 1205, 1720
Hin6I	GCGC	3 cut(s)	144, 338, 1045
HinP1I	GCGC	3 cut(s)	144, 338, 1045
HincII	GTYRAC	2 cut(s)	849, 862
HindII	GTYRAC	2 cut(s)	849, 862
HindIII	AAGCTT	1 cut(s)	404
HinfI	GANTC	9 cut(s)	170, 197, 354, 441, 668, 893, 1331, 1463, 1533
HpaII	CCGG	1 cut(s)	1414
HphI	GGTGA	5 cut(s)	398, 404, 569, 814, 1166
Hpy166II	GTNNAC	5 cut(s)	12, 604, 849, 862, 1439
Hpy188III	TCNNGA	9 cut(s)	151, 415, 493, 1202, 1359, 1399, 1414, 1457, 1537
Hpy8I	GTNNAC	5 cut(s)	12, 604, 849, 862, 1439
Hpy99I	CGWCG	2 cut(s)	107, 884
HpyAV	CCTTC	8 cut(s)	30, 53, 118, 383, 667, 1145, 1312, 1411
HpyCH4III	ACNGT	4 cut(s)	231, 988, 1179, 1598
HpyCH4IV	ACGT	4 cut(s)	454, 727, 864, 1026
HpyCH4V	TGCA	4 cut(s)	89, 547, 748, 1716
HpyF10VI	GCNNNNNNNGC	1 cut(s)	335
HpyF3I	CTNAG	9 cut(s)	183, 246, 308, 402, 477, 752, 915, 939, 963
HpySE526I	ACGT	4 cut(s)	454, 727, 864, 1026
Hsp92I	GRCGYC	1 cut(s)	144
Hsp92II	CATG	5 cut(s)	265, 662, 1134, 1205, 1720
HspAI	GCGC	3 cut(s)	144, 338, 1045
KasI	GGCGCC	1 cut(s)	143
Kpn2I	TCCGGA	1 cut(s)	1413
Ksp22I	TGATCA	1 cut(s)	489
LmnI	GCTCC	4 cut(s)	911, 1012, 1134, 1201
LweI	GCATC	5 cut(s)	325, 534, 925, 949, 1570
MaeI	CTAG	4 cut(s)	255, 552, 722, 1664
MaeII	ACGT	4 cut(s)	454, 727, 864, 1026
MaeIII	GTNAC	3 cut(s)	290, 455, 1060
MflI	RGATCY	3 cut(s)	115, 1453, 1693
Mly113I	GGCGCC	1 cut(s)	144
MlyI	GAGTC	3 cut(s)	206, 677, 1472
MmeI	TCCRAC	1 cut(s)	126
MroI	TCCGGA	1 cut(s)	1413
MroXI	GAANNNNTTC	1 cut(s)	1368
MseI	TTAA	6 cut(s)	420, 564, 1029, 1560, 1613, 1707
MslI	CAYNNNNRTG	1 cut(s)	645
MspA1I	CMGCKG	1 cut(s)	1148
MspI	CCGG	1 cut(s)	1414
MspR9I	CCNGG	1 cut(s)	242
Mva1269I	GAATGC	1 cut(s)	91
MvaI	CCWGG	1 cut(s)	242
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	1 cut(s)	335
NarI	GGCGCC	1 cut(s)	144
NlaIII	CATG	5 cut(s)	265, 662, 1134, 1205, 1720
NlaIV	GGNNCC	4 cut(s)	145, 1136, 1197, 1695
NmuCI	GTSAC	1 cut(s)	455
NsbI	TGCGCA	1 cut(s)	1046
NspI	RCATGY	1 cut(s)	662
NspV	TTCGAA	1 cut(s)	1258
PagI	TCATGA	1 cut(s)	1201
PctI	GAATGC	1 cut(s)	91
PdmI	GAANNNNTTC	1 cut(s)	1368
PfeI	GAWTC	6 cut(s)	170, 354, 441, 893, 1331, 1533
PkrI	GCNGC	2 cut(s)	218, 1585
PleI	GAGTC	3 cut(s)	205, 676, 1471
PluTI	GGCGCC	1 cut(s)	147
PpsI	GAGTC	3 cut(s)	205, 676, 1471
Ppu21I	YACGTR	1 cut(s)	455
Psp6I	CCWGG	1 cut(s)	240
PspEI	GGTNACC	1 cut(s)	1060
PspGI	CCWGG	1 cut(s)	240
PspN4I	GGNNCC	4 cut(s)	145, 1136, 1197, 1695
PspPI	GGNCC	1 cut(s)	1420
PsrI	GAACNNNNNNTAC	2 cut(s)	1167, 1199
PsuI	RGATCY	3 cut(s)	115, 1453, 1693
RsaI	GTAC	3 cut(s)	733, 1076, 1176
RsaNI	GTAC	3 cut(s)	732, 1075, 1175
RseI	CAYNNNNRTG	1 cut(s)	645
SaqAI	TTAA	6 cut(s)	420, 564, 1029, 1560, 1613, 1707
SatI	GCNGC	2 cut(s)	217, 1584
Sau96I	GGNCC	1 cut(s)	1420
SchI	GAGTC	3 cut(s)	206, 677, 1472
ScrFI	CCNGG	1 cut(s)	242
SfaNI	GCATC	5 cut(s)	325, 534, 925, 949, 1570
SfcI	CTRYAG	1 cut(s)	507
SfoI	GGCGCC	1 cut(s)	145
SfuI	TTCGAA	1 cut(s)	1258
SmiMI	CAYNNNNRTG	1 cut(s)	645
SpeI	ACTAGT	1 cut(s)	551
SsiI	CCGC	4 cut(s)	194, 216, 1146, 1583
SspDI	GGCGCC	1 cut(s)	143
SspI	AATATT	2 cut(s)	773, 1674
SspMI	CTAG	4 cut(s)	255, 552, 722, 1664
StyD4I	CCNGG	1 cut(s)	240
StyI	CCWWGG	2 cut(s)	1101, 1191
TaaI	ACNGT	4 cut(s)	231, 988, 1179, 1598
TaiI	ACGT	4 cut(s)	457, 730, 867, 1029
TaqI	TCGA	4 cut(s)	624, 671, 1258, 1284
TatI	WGTACW	1 cut(s)	1174
TauI	GCSGC	2 cut(s)	219, 1586
TfiI	GAWTC	6 cut(s)	170, 354, 441, 893, 1331, 1533
Tru1I	TTAA	6 cut(s)	420, 564, 1029, 1560, 1613, 1707
Tru9I	TTAA	6 cut(s)	420, 564, 1029, 1560, 1613, 1707
TscAI	CASTG	1 cut(s)	373
TseFI	GTSAC	1 cut(s)	455
Tsp45I	GTSAC	1 cut(s)	455
TspDTI	ATGAA	5 cut(s)	675, 969, 1258, 1293, 1557
TspGWI	ACGGA	3 cut(s)	85, 589, 1424
TspRI	CASTG	1 cut(s)	373
XagI	CCTNNNNNAGG	1 cut(s)	1100
XapI	RAATTY	7 cut(s)	378, 818, 1082, 1163, 1280, 1544, 1687
XceI	RCATGY	1 cut(s)	662
XmiI	GTMKAC	1 cut(s)	603
XmnI	GAANNNNTTC	1 cut(s)	1368
XspI	CTAG	4 cut(s)	255, 552, 722, 1664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.