Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0008053

Physical Location & Seq

Genomic Coordinates Forward (+)

5732363 .. 5746419

Gene Structure 14057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1072000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4536 bp

ATGAGCCTCCGCCGGGGCTCCAAGGTCTGGGTCGAGGACCGGGATTTGGCCTGGGTCCCGGCTGAAGTCGCCGACTGGAAGGGGAAGCAGCTCCAGGTCGTCACCGCTTCGGGAAAGAAGGTTTTGGCTTTGCCGGAGAAGCTGTTTCTGAGGGATGCGGATGAGGACGAGCATGGCGGAGTGGACGACATGACGAAGCTGACATATTTGAACGAGCCGGGTGTGCTGTATAACCTTCAGAGGAGATACGCTCTCAATGATATATATACATATACAGGGAGCATTTTGATTGCGGTTAACCCATTCACAAAGCTTCCCCATCTATACAATGTCCATATGATGGAGCAGTATAAGGGAGCTCCATTTGGTGAGCTAAGCCCCCATGTTTTTGCGGTGGCTGATGCGTCTTATAGAGCAATGGTGAATGATGGACAAAGCCAATCAATACTGGTCAGTGGTGAAAGTGGAGCTGGGAAGACTGAAACGACGAAACTGATTATGCAGTATCTTACTTATGTAGGAGGCCGAGCTGCTGGTGCTGGTGATGAGAGAACTGTTGAACAACAAGTTCTTGAATCGAATCCCCTTTTGGAGGCATTTGGTAATGCCAGGACTGTTAGAAATGACAATTCAAGTCGTTTTGGCAAGTTTGTTGAGATCCAGTTTGATGCAAGTGGTAGAATATCTGGAGCTGCAATTAGAACTTATCTACTGGAAAGATCCCGTGTTGTTCAGATTACAGATCCTGAAAGGAATTACCACTGTTTTTACCAGTTGTGCGCATCTGGAAAGGATGCAGAGAAGTACAAGTTAGACCACCCAAGCCACTTCCATTACCTGAATCAAAGCAAGACTTATGAACTTGATGGAGTGAGCAGTGCAGAAGAGTATACGAAGACAAGAACAGCAATGGATATTGTTGGTATCAGCTGTGAAGATCAGGAAGCAATATTCCGCACCTTGGCTGCAATTCTGCATTTGGGGAACATTGAATTTTCTCCTGGGAAAGAGCACGACTCTTCAGTTCTAAAGGATCAGAAATCGAACTTTCATATGCAGATGGCTGCTAAACTTTTCATGTGTGATGTGGACCTCTTATTAGCAACACTGTCTACTCGTACAATCCAAACTCGTGAAGGAATTATTGTTAAAGCTCTCGACTGTTGTGGTGCTATTTCTAGTAGAGATGCATTGGCAAAGACTGTTTATTCTCGGTTGTTTGACTGGCTTGTTGATAAGATTAATACATCTGTTGGCCAAGACTCGACTTCCCAAATGCAAATAGGAGTCTTGGACATTTATGGTTTTGAATGCTTTAAGGACAATAGTTTTGAGCAATTTTGCATTAACTTTGCAAATGAGAAGCTACAGCAACACTTTAATGAGCATGTGTTCAAGATGGAGCAGGAGGAGTATAGCAAAGAGGAAATTGATTGGAGCTACATTGAATTCATTGACAACCAAGATGTTCTGGATTTGATTGAGAAGAAACCTGTTGGGATAATTGCTCTCTTGGATGAAGCTTGCATGTTCCCAAAATCAACACACCAAAGTTTTTCAACCAGGTTGTTTCAGCTTTTACGGCCCCACCAAAGGTTGGAAAAGGCAAAATTTTCGGAAACAGATTTTACCATGTCCCATTATGCTGGAAAGGTTACTTATCACACAGATACCTTTTTGGATAAGAATCGTGATTATGTTGTCGTAGAACATTGCAATCTGTTGTCTTCTTCCAAATGCCCTTTTGTTGCTGGTCTTTTCGGTCCGCTACCTGAGGAATCTTCAAGATCATCGTACAAATTTTCTTCTGTGGCCACTAGATTTAAGCAACAACTTCAAGCACTTATGGAAACCCTCAATTCAACAGAGCCTCATTACATACGCTGTGTTAAGCCGAACTCATTGAATCGACCGCAAAAGTTTGAGAATTTGAGCATCTTACATCAATTACGCTGCGGGGGTGTTCTAGAGGCTGTTCGGATAAGTCTGGCAGGTTATCCCACACGTAGAACTTACTCAGAGTTTGTAGATCGATTTGGATTATTAGCTCCTGAATTCATGGATGGAAGCTATGATGAAAAATCTACAACTGAGAAAATTTTGAAAAAGTTAAAGCTAGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTTAGGGCTGGTCAAATTGGTGTTCTGGACTCCCGACGGGCAGAGGTTTTGGACAATGCTGCAAAGCGCATTCAACGTCAATTGCGAACGTTTGTTGCTCGCAAAGATTTTGTTTCCAAACGAGCTGCTGCATTTGCACTCCAAGCTTTTTGCAGAGGATGCCTTGCTCGAGCGTTGTATACTTTAAAACGGGAGGCAGCAGCTGCTATTTTTATACAGAAACATGTCCGAAGGTGGCTATTAAAGTGTGCTTATGTGGAATTATATTCAGCTGCTACTGTCATACAGTCCAATATTCGTGGTTTTTCAATTCGCCGAAGATTTTTGCATGGAAAGAAACATAAAGCTGCCACCTTGATCCAGGCTCGGTGGAGGATGTGCAAGGTTCGCTCGGCATTCCAACATCACCAAGCTTCTGTTGTAGCAATACAATGTCTTTGGAGGCGAAAGTTAGCAAGGAGAGAGCTCCGAAGGCTTAAACGAGAGGCAAATGAAACCGGTGCCTTGCGTTTAGCTAAGGGTAAACTTGAGAAGCAGTTAGAGGACCTCACATGGCGGTTACAACTTGAGAAACGATTACGGGTATCTAATGAGGAAGCTAAGTCAGTAGAAATTTCAAAACTTCAAAAAGTGTTGGAATCCTTGAGTCTTGAGTTAGATGCGTCAAAGCTGGCTACAATTAATGAGTGCAACAAGAATGCAGTGCTTCAAAATCAATTGGAGTTATCAGTGAAAGAAAAATCATCTTTGGAAAGAGAAATCATTGGAATGGCTGAATTGAGAAGGGAAAATGCATTTTTAAAGATTTCCTTGGATGCATTGGAGAAGAAGAACTCAGCTCTTGAAACCGAACTTCTCAAGGCTCGAAAGGACAGTACAGACACCATTCAGAAGTTGCATGAATTTGAACAGAAGTGCAACCAGCTCCAGCAGAATGTAAAGAGCCTTGAGGAGAAACTCTCTGGATTAGAGGAGGAGAATCTTATCATGCGACAAAAGGCCCTTAGTGTGCCTGCAAAGAGCACTCGGCAAGGTGTTGAAAAGTTGTTTCCAGAGAAAAACCTTGGTGCGGTTATTCCCATCACTGAACAGAAGCCTGCATTTGAGTCACCCACACCTACAAAAATGATTGCACCCTTTTCACATGTCTTGTCAGAATCACGCCGATCAAAGTTAGCAGTTGAGAGGCACCAGGAGAACTATGAATTCCTATCAAGATGTGTTAAGGAAGATTTGGGGTTTAAAGACAGCAAACCATTGGCGGCTTGTATCATATACAAATGCCTTCTTCAGTGGCATGCCTTTGAGTCTGAGCGTACAGTTATTTTTGACCATATAATTGAGGGAATAAATGAAGTTCTGAAGGTTGGGGATGAGAACATAACCTTGCCCTATTGGCTGTCCAATGCCTCAGCGCTTCTATGCCTTTTGCAGAGGAATTTACGACCAAATAGTTTCCCAGCAACTCAGCGTTCTGGGTCTTCTGCTTTAGCTCTCAGGATTGCACAAGGACTGACATCTCCTTTCAAATATATTGGTTATGAAGATGGTATGTCACATCTTGAAGCAAGATATCCAGCTATATTGTTCAAACAGCAGCTAACTGCTTGTGTAGAAAAGATCTTTGGCTTGATGCGCGACAGTTTGAAGAAGGAATTGGCTCCACTCTTGGGCTCATGCATTCAGGCACCCAAAGCTGCGCGAAAGTCATCTAGATCACCTGGGAACGCTCCTCAGCAATTACCTGGAAGTCAGTGGGACAACATAATCAAATTCTTGGATACCCTAATGAGTCGATTACGTGGGAATCATGTACCTTCATTTTTTATTCGCAAGTTAGTCACACAGGTCTTCTCTTTCATCAATATGTCACTTTTCAACAGTCTACTGCTGCGACGCGAATGTTGCACATTTTCGAACGGTGAATACGTAAAATCAGGTCTTGCTGAACTGGAGAAATGGATTGGCAACACCGGGGAGGAGTATGCAGGAACCTCTTGGCACGAGCTAAATTATATCAGACAAGCTGTTGGTTTTCTGGTAATACATCAGAAGAGGAAAAAGTCTCTCGACGAAATTAGGCAGGATCTTTGTCCGGCATTGACAGTCAGACAAATCTACCGAATAAGTACAATGTACTGGGATGACAAATACGGCACTCAGAGTGTGTCCAACGAGGTGGTTGCTCAAATGAGGGAGCTTTTGAACAAGGACAACCAGAATCTGACCTCCAATTCGTTCTTGTTGGATGATGATCTGAGCATTCCATTCTCGACTGAAGATATCGACAAGGCAATTCCTCTAAGCGATCCTTCAGAAATCGAACTTCCATCATCCTTGTCTGGTTATACCTGCGCGCAGTTTCTTGTCCAGCCCCAAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000146 GO:0000166 GO:0000331 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005773 GO:0005856 GO:0006810 GO:0006928 GO:0007097 GO:0008092 GO:0008144 GO:0008150 GO:0008360 GO:0009987 GO:0012505 GO:0015629 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022603 GO:0022604 GO:0030029 GO:0030048 GO:0030554 GO:0030898 GO:0031090 GO:0031410 GO:0031965 GO:0031967 GO:0031975 GO:0031982 GO:0032553 GO:0032555 GO:0032559 GO:0032878 GO:0033275 GO:0035639 GO:0036094 GO:0042623 GO:0042641 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043531 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046907 GO:0050789 GO:0050793 GO:0050794 GO:0051015 GO:0051128 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:0065007 GO:0065008 GO:0070252 GO:0097159 GO:0097367 GO:0097708 GO:0140027 GO:1901265 GO:1901363 GO:2000769

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DIL IQ Myosin_N Myosin_head

Protein Analysis

1512

Amino Acids

171.9

Weight (kDa)

8.78

Isoelectric Point (pI)

48.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myosin_head	PF00063	61 - 719	1.6e-250	Myosin head (motor domain)
DIL	PF01843	1330 - 1433	3.9e-28	DIL domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33200 AT4G33200 AT4G33200 AT4G33200
fragaria_vesca	FvH4_2g30900
malus_domestica	MD08G1072000.v1.1 MD15G1049200.v1.1
prunus_persica	Prupe.1G403500_v2.0.a1 Prupe.1G403500_v2.0.a1 Prupe.1G403500_v2.0.a1 Prupe.1G403500_v2.0.a1
pyrus_communis	pycom08g05980 pycom08g05990 pycom15g04800
rosa_chinensis	RchiOBHm_Chr6g0311941
rosa_laevigata	RLG00000010367
rosa_multiflora	Rmu_sc0005381.1_g000002
rosa_roxburghii	Rroxscaffold_7G00157200
rosa_rugosa	Rorug06G0391500
rosa_samantha	Rh6AG508000 Rh6BG519200 Rh6CG524900 Rh6DG510500
rosa_wichuraiana	Rw6G044220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	781
Acc36I	ACCTGC	2 cut(s)	1982, 4511
AccB1I	GGYRCC	3 cut(s)	2651, 3339, 3838
AccB7I	CCANNNNNTGG	3 cut(s)	27, 340, 1597
AccI	GTMKAC	4 cut(s)	890, 1112, 2330, 4036
AccII	CGCG	4 cut(s)	3789, 3853, 4050, 4508
AclI	AACGTT	1 cut(s)	2240
AclWI	GGATC	7 cut(s)	652, 714, 737, 1041, 2503, 4245, 4454
AcoI	YGGCCR	2 cut(s)	1255, 1812
AcuI	CTGAAG	7 cut(s)	84, 221, 1005, 3425, 3533, 4449, 4449
AfaI	GTAC	8 cut(s)	806, 1120, 1796, 3028, 3469, 3966, 4282, 4289
AfeI	AGCGCT	1 cut(s)	3567
AflIII	ACRYGT	3 cut(s)	2003, 2374, 3295
AgeI	ACCGGT	1 cut(s)	2648
AjnI	CCWGG	9 cut(s)	50, 93, 608, 1000, 1562, 2511, 3342, 3871, 3895
AjuI	GAANNNNNNNTTGG	8 cut(s)	572, 604, 2114, 2146, 3759, 3791, 3791, 3823
Alw21I	GWGCWC	4 cut(s)	361, 1014, 2619, 3176
Alw26I	GTCTC	1 cut(s)	4221
AlwI	GGATC	7 cut(s)	652, 714, 737, 1041, 2503, 4245, 4454
AlwNI	CAGNNNCTG	3 cut(s)	746, 2354, 4375
Ama87I	CYCGRG	1 cut(s)	2319
Aor51HI	AGCGCT	1 cut(s)	3567
AoxI	GGCC	6 cut(s)	48, 523, 1255, 1583, 1812, 3150
ArsI	GACNNNNNNTTYG	4 cut(s)	1313, 1345, 4369, 4401
AseI	ATTAAT	2 cut(s)	1242, 2832
AsiGI	ACCGGT	1 cut(s)	2648
AspLEI	GCGC	7 cut(s)	782, 2220, 3568, 3789, 3853, 4508, 4510
AspS9I	GGNCC	8 cut(s)	37, 55, 1090, 1584, 1763, 2139, 2695, 3151
AsuC2I	CCSGG	5 cut(s)	14, 41, 59, 219, 4126
AsuHPI	GGTGA	9 cut(s)	94, 380, 433, 470, 554, 2549, 3252, 3861, 4085
AsuII	TTCGAA	1 cut(s)	4067
AvaI	CYCGRG	1 cut(s)	2319
AvaII	GGWCC	6 cut(s)	37, 55, 1090, 1763, 2139, 2695
AxyI	CCTNAGG	1 cut(s)	1773
BalI	TGGCCA	2 cut(s)	1257, 1814
BanI	GGYRCC	3 cut(s)	2651, 3339, 3838
BanII	GRGCYC	4 cut(s)	20, 361, 2619, 3827
BauI	CACGAG	2 cut(s)	1131, 4154
BbsI	GAAGAC	5 cut(s)	482, 902, 1719, 3624, 3994
Bbv12I	GWGCWC	4 cut(s)	361, 1014, 2619, 3176
BbvCI	CCTCAGC	2 cut(s)	3562, 3885
BceAI	ACGGC	2 cut(s)	1598, 4321
BcgI	CGANNNNNNTGC	4 cut(s)	1596, 1630, 4316, 4350
BciT130I	CCWGG	9 cut(s)	52, 95, 610, 1002, 1564, 2513, 3344, 3873, 3897
BciVI	GTATCC	1 cut(s)	3925
BcnI	CCSGG	5 cut(s)	14, 41, 59, 219, 4126
BcoDI	GTCTC	1 cut(s)	4221
BfaI	CTAG	5 cut(s)	1179, 1818, 1967, 2117, 3864
BfmI	CTRYAG	1 cut(s)	1367
BfoI	RGCGCY	1 cut(s)	3569
BfuAI	ACCTGC	2 cut(s)	1982, 4511
BfuI	GTATCC	1 cut(s)	3925
BglI	GCCNNNNNGGC	1 cut(s)	3547
BglII	AGATCT	1 cut(s)	3771
BlpI	GCTNAGC	1 cut(s)	374
Bme18I	GGWCC	6 cut(s)	37, 55, 1090, 1763, 2139, 2695
BmeT110I	CYCGRG	1 cut(s)	2319
BmgT120I	GGNCC	8 cut(s)	37, 55, 1090, 1584, 1763, 2139, 2695, 3151
BmiI	GGNNCC	9 cut(s)	19, 56, 57, 1586, 2653, 3341, 3813, 3840, 4144
BmrI	ACTGGG	1 cut(s)	4300
BmuI	ACTGGG	1 cut(s)	4300
BpiI	GAAGAC	5 cut(s)	482, 902, 1719, 3624, 3994
BplI	GAGNNNNNCTC	6 cut(s)	235, 267, 1001, 1033, 3095, 3127
BpmI	CTGGAG	4 cut(s)	77, 708, 3062, 4124
Bpu10I	CCTNAGC	3 cut(s)	2667, 3562, 3885
Bpu1102I	GCTNAGC	1 cut(s)	374
Bpu14I	TTCGAA	1 cut(s)	4067
BpuEI	CTTGAG	6 cut(s)	2699, 2738, 2815, 2822, 2993, 3119
BpuMI	CCSGG	5 cut(s)	14, 41, 59, 219, 4126
Bsa29I	ATCGAT	1 cut(s)	2032
BsaAI	YACGTR	3 cut(s)	2006, 3953, 4081
BsaBI	GATNNNNATC	2 cut(s)	1686, 4404
BsaJI	CCNNGG	9 cut(s)	13, 21, 51, 960, 1001, 2961, 3214, 3872, 4125
BsaWI	WCCGGW	1 cut(s)	2648
BsaXI	ACNNNNNCTCC	2 cut(s)	128, 158
Bse118I	RCCGGY	1 cut(s)	2648
Bse1I	ACTGG	8 cut(s)	80, 453, 661, 717, 772, 1229, 4107, 4295
Bse21I	CCTNAGG	1 cut(s)	1773
Bse3DI	GCAATG	3 cut(s)	423, 915, 1711
Bse8I	GATNNNNATC	2 cut(s)	1686, 4404
BseBI	CCWGG	9 cut(s)	52, 95, 610, 1002, 1564, 2513, 3344, 3873, 3897
BseCI	ATCGAT	1 cut(s)	2032
BseDI	CCNNGG	9 cut(s)	13, 21, 51, 960, 1001, 2961, 3214, 3872, 4125
BseJI	GATNNNNATC	2 cut(s)	1686, 4404
BseMI	GCAATG	3 cut(s)	423, 915, 1711
BseNI	ACTGG	8 cut(s)	80, 453, 661, 717, 772, 1229, 4107, 4295
BsePI	GCGCGC	1 cut(s)	4506
BseRI	GAGGAG	7 cut(s)	256, 1424, 3116, 3137, 3140, 3873, 4145
BseYI	CCCAGC	2 cut(s)	470, 3610
BsgI	GTGCAG	1 cut(s)	900
Bsh1236I	CGCG	4 cut(s)	3789, 3853, 4050, 4508
Bsh1285I	CGRYCG	1 cut(s)	1913
BshFI	GGCC	6 cut(s)	50, 525, 1257, 1585, 1814, 3152
BshNI	GGYRCC	3 cut(s)	2651, 3339, 3838
BshTI	ACCGGT	1 cut(s)	2648
BshVI	ATCGAT	1 cut(s)	2032
BsiEI	CGRYCG	1 cut(s)	1913
BsiHKAI	GWGCWC	4 cut(s)	361, 1014, 2619, 3176
BsiHKCI	CYCGRG	1 cut(s)	2319
BsiSI	CCGG	8 cut(s)	13, 40, 59, 134, 218, 2649, 4125, 4247
BslFI	GGGAC	3 cut(s)	41, 1621, 3923
BsmAI	GTCTC	1 cut(s)	4221
BsmFI	GGGAC	3 cut(s)	41, 1621, 3923
BsmI	GAATGC	6 cut(s)	1316, 2220, 2546, 2854, 3831, 4413
BsnI	GGCC	6 cut(s)	50, 525, 1257, 1585, 1814, 3152
BsoBI	CYCGRG	1 cut(s)	2319
Bsp119I	TTCGAA	1 cut(s)	4067
Bsp1286I	GDGCHC	6 cut(s)	20, 361, 1014, 2619, 3176, 3827
Bsp1720I	GCTNAGC	1 cut(s)	374
BspANI	GGCC	6 cut(s)	50, 525, 1257, 1585, 1814, 3152
BspDI	ATCGAT	1 cut(s)	2032
BspFNI	CGCG	4 cut(s)	3789, 3853, 4050, 4508
BspLI	GGNNCC	9 cut(s)	19, 56, 57, 1586, 2653, 3341, 3813, 3840, 4144
BspMI	ACCTGC	2 cut(s)	1982, 4511
BspPI	GGATC	7 cut(s)	652, 714, 737, 1041, 2503, 4245, 4454
BspT104I	TTCGAA	1 cut(s)	4067
BspT107I	GGYRCC	3 cut(s)	2651, 3339, 3838
BsrDI	GCAATG	3 cut(s)	423, 915, 1711
BsrFI	RCCGGY	1 cut(s)	2648
BsrI	ACTGG	8 cut(s)	80, 453, 661, 717, 772, 1229, 4107, 4295
BssAI	RCCGGY	1 cut(s)	2648
BssECI	CCNNGG	9 cut(s)	13, 21, 51, 960, 1001, 2961, 3214, 3872, 4125
BssHII	GCGCGC	1 cut(s)	4506
BssNAI	GTATAC	2 cut(s)	891, 2331
BssSI	CACGAG	2 cut(s)	1131, 4154
BssT1I	CCWWGG	4 cut(s)	21, 960, 2961, 3214
Bst1107I	GTATAC	2 cut(s)	891, 2331
Bst2BI	CACGAG	2 cut(s)	1131, 4154
Bst2UI	CCWGG	9 cut(s)	52, 95, 610, 1002, 1564, 2513, 3344, 3873, 3897
Bst6I	CTCTTC	3 cut(s)	879, 1024, 4199
BstAPI	GCANNNNNTGC	2 cut(s)	2310, 2354
BstBAI	YACGTR	3 cut(s)	2006, 3953, 4081
BstBI	TTCGAA	1 cut(s)	4067
BstC8I	GCNNGC	7 cut(s)	1525, 2251, 2823, 3165, 3249, 3450, 4508
BstENI	CCTNNNNNAGG	1 cut(s)	590
BstFNI	CGCG	4 cut(s)	3789, 3853, 4050, 4508
BstH2I	RGCGCY	1 cut(s)	3569
BstHHI	GCGC	7 cut(s)	782, 2220, 3568, 3789, 3853, 4508, 4510
BstMAI	GTCTC	1 cut(s)	4221
BstMCI	CGRYCG	1 cut(s)	1913
BstNI	CCWGG	9 cut(s)	52, 95, 610, 1002, 1564, 2513, 3344, 3873, 3897
BstNSI	RCATGY	5 cut(s)	1391, 1531, 2378, 3299, 3452
BstSFI	CTRYAG	1 cut(s)	1367
BstSNI	TACGTA	1 cut(s)	4081
BstUI	CGCG	4 cut(s)	3789, 3853, 4050, 4508
BstV2I	GAAGAC	5 cut(s)	482, 902, 1719, 3624, 3994
BstX2I	RGATCY	5 cut(s)	657, 719, 742, 3771, 4237
BstXI	CCANNNNNNTGG	2 cut(s)	1646, 4330
BstYI	RGATCY	5 cut(s)	657, 719, 742, 3771, 4237
BstZ17I	GTATAC	2 cut(s)	891, 2331
Bsu15I	ATCGAT	1 cut(s)	2032
Bsu36I	CCTNAGG	1 cut(s)	1773
BsuI	GTATCC	1 cut(s)	3925
BsuRI	GGCC	6 cut(s)	50, 525, 1257, 1585, 1814, 3152
BsuTUI	ATCGAT	1 cut(s)	2032
BtsI	GCAGTG	2 cut(s)	883, 2859
BtsIMutI	CAGTG	9 cut(s)	460, 760, 883, 1106, 2859, 2886, 3234, 3449, 3911
BveI	ACCTGC	2 cut(s)	1982, 4511
Cac8I	GCNNGC	7 cut(s)	1525, 2251, 2823, 3165, 3249, 3450, 4508
CaiI	CAGNNNCTG	3 cut(s)	746, 2354, 4375
CfoI	GCGC	7 cut(s)	782, 2220, 3568, 3789, 3853, 4508, 4510
Cfr10I	RCCGGY	1 cut(s)	2648
Cfr13I	GGNCC	8 cut(s)	37, 55, 1090, 1584, 1763, 2139, 2695, 3151
ClaI	ATCGAT	1 cut(s)	2032
CpoI	CGGWCCG	1 cut(s)	1763
CseI	GACGC	3 cut(s)	393, 2802, 4056
CsiI	ACCWGGT	1 cut(s)	1562
Csp6I	GTAC	8 cut(s)	805, 1119, 1795, 3027, 3468, 3965, 4281, 4288
CspAI	ACCGGT	1 cut(s)	2648
CspCI	CAANNNNNGTGG	2 cut(s)	2431, 2466
CspI	CGGWCCG	1 cut(s)	1763
CviQI	GTAC	8 cut(s)	805, 1119, 1795, 3027, 3468, 3965, 4281, 4288
DraI	TTTAAA	3 cut(s)	2337, 2952, 3394
EaeI	YGGCCR	2 cut(s)	1255, 1812
Eam1104I	CTCTTC	3 cut(s)	879, 1024, 4199
EarI	CTCTTC	3 cut(s)	879, 1024, 4199
EciI	GGCGGA	1 cut(s)	192
Ecl136II	GAGCTC	2 cut(s)	359, 2617
Eco105I	TACGTA	1 cut(s)	4081
Eco130I	CCWWGG	4 cut(s)	21, 960, 2961, 3214
Eco24I	GRGCYC	4 cut(s)	20, 361, 2619, 3827
Eco32I	GATATC	2 cut(s)	3725, 4435
Eco47I	GGWCC	6 cut(s)	37, 55, 1090, 1763, 2139, 2695
Eco47III	AGCGCT	1 cut(s)	3567
Eco53kI	GAGCTC	2 cut(s)	359, 2617
Eco57I	CTGAAG	7 cut(s)	84, 221, 1005, 3425, 3533, 4449, 4449
Eco81I	CCTNAGG	1 cut(s)	1773
Eco88I	CYCGRG	1 cut(s)	2319
EcoICRI	GAGCTC	2 cut(s)	359, 2617
EcoNI	CCTNNNNNAGG	1 cut(s)	590
EcoO109I	RGGNCCY	3 cut(s)	55, 2695, 3151
EcoRI	GAATTC	3 cut(s)	1448, 2054, 3356
EcoRII	CCWGG	9 cut(s)	50, 93, 608, 1000, 1562, 2511, 3342, 3871, 3895
EcoRV	GATATC	2 cut(s)	3725, 4435
EcoT14I	CCWWGG	4 cut(s)	21, 960, 2961, 3214
EcoT22I	ATGCAT	4 cut(s)	1192, 2947, 2971, 3833
EcoT38I	GRGCYC	4 cut(s)	20, 361, 2619, 3827
ErhI	CCWWGG	4 cut(s)	21, 960, 2961, 3214
FalI	AAGNNNNNCTT	8 cut(s)	838, 870, 2136, 2168, 2945, 2977, 4447, 4479
FaqI	GGGAC	3 cut(s)	41, 1621, 3923
FauI	CCCGC	1 cut(s)	1949
FauNDI	CATATG	2 cut(s)	336, 1053
FblI	GTMKAC	4 cut(s)	890, 1112, 2330, 4036
FriOI	GRGCYC	4 cut(s)	20, 361, 2619, 3827
FspAI	RTGCGCAY	1 cut(s)	781
FspBI	CTAG	5 cut(s)	1179, 1818, 1967, 2117, 3864
FspI	TGCGCA	1 cut(s)	781
GlaI	GCGC	7 cut(s)	781, 2219, 3567, 3788, 3852, 4507, 4509
GsaI	CCCAGC	2 cut(s)	474, 3614
GsuI	CTGGAG	4 cut(s)	77, 708, 3062, 4124
HaeII	RGCGCY	1 cut(s)	3569
HaeIII	GGCC	6 cut(s)	50, 525, 1257, 1585, 1814, 3152
HapII	CCGG	8 cut(s)	13, 40, 59, 134, 218, 2649, 4125, 4247
HgaI	GACGC	3 cut(s)	393, 2802, 4056
HhaI	GCGC	7 cut(s)	782, 2220, 3568, 3789, 3853, 4508, 4510
Hin6I	GCGC	7 cut(s)	780, 2218, 3566, 3787, 3851, 4506, 4508
HinP1I	GCGC	7 cut(s)	780, 2218, 3566, 3787, 3851, 4506, 4508
HincII	GTYRAC	1 cut(s)	298
HindII	GTYRAC	1 cut(s)	298
HindIII	AAGCTT	4 cut(s)	311, 1521, 2295, 2562
HpaI	GTTAAC	1 cut(s)	298
HpaII	CCGG	8 cut(s)	13, 40, 59, 134, 218, 2649, 4125, 4247
HphI	GGTGA	9 cut(s)	94, 380, 433, 470, 554, 2549, 3252, 3861, 4085
Hpy166II	GTNNAC	8 cut(s)	184, 298, 891, 1090, 1113, 2331, 2675, 4037
Hpy8I	GTNNAC	8 cut(s)	184, 298, 891, 1090, 1113, 2331, 2675, 4037
Hpy99I	CGWCG	4 cut(s)	490, 2190, 4050, 4226
HpyCH4IV	ACGT	5 cut(s)	2005, 2227, 2240, 3952, 4080
HpySE526I	ACGT	5 cut(s)	2005, 2227, 2240, 3952, 4080
HspAI	GCGC	7 cut(s)	780, 2218, 3566, 3787, 3851, 4506, 4508
KflI	GGGWCCC	1 cut(s)	55
KspAI	GTTAAC	1 cut(s)	298
MabI	ACCWGGT	1 cut(s)	1562
MaeI	CTAG	5 cut(s)	1179, 1818, 1967, 2117, 3864
MaeII	ACGT	5 cut(s)	2005, 2227, 2240, 3952, 4080
MaeIII	GTNAC	7 cut(s)	100, 1654, 2709, 3258, 3705, 3991, 4020
MfeI	CAATTG	2 cut(s)	2231, 2867
MflI	RGATCY	5 cut(s)	657, 719, 742, 3771, 4237
MhlI	GDGCHC	6 cut(s)	20, 361, 1014, 2619, 3176, 3827
MlsI	TGGCCA	2 cut(s)	1257, 1814
MluNI	TGGCCA	2 cut(s)	1257, 1814
MlyI	GAGTC	8 cut(s)	1010, 1256, 1296, 2174, 2806, 3266, 3467, 3952
MmeI	TCCRAC	5 cut(s)	1578, 2575, 2766, 4347, 4377
Mox20I	TGGCCA	2 cut(s)	1257, 1814
Mph1103I	ATGCAT	4 cut(s)	1192, 2947, 2971, 3833
MscI	TGGCCA	2 cut(s)	1257, 1814
MslI	CAYNNNNRTG	3 cut(s)	1380, 2918, 4016
Msp20I	TGGCCA	2 cut(s)	1257, 1814
MspA1I	CMGCKG	3 cut(s)	930, 2354, 2423
MspI	CCGG	8 cut(s)	13, 40, 59, 134, 218, 2649, 4125, 4247
MunI	CAATTG	2 cut(s)	2231, 2867
Mva1269I	GAATGC	6 cut(s)	1316, 2220, 2546, 2854, 3831, 4413
MvaI	CCWGG	9 cut(s)	52, 95, 610, 1002, 1564, 2513, 3344, 3873, 3897
MvnI	CGCG	4 cut(s)	3789, 3853, 4050, 4508
NciI	CCSGG	5 cut(s)	14, 41, 59, 219, 4126
NdeI	CATATG	2 cut(s)	336, 1053
NlaIV	GGNNCC	9 cut(s)	19, 56, 57, 1586, 2653, 3341, 3813, 3840, 4144
NmeAIII	GCCGAG	3 cut(s)	551, 2522, 3157
NmuCI	GTSAC	5 cut(s)	100, 3258, 3705, 3991, 4020
NsbI	TGCGCA	1 cut(s)	781
NsiI	ATGCAT	4 cut(s)	1192, 2947, 2971, 3833
NspI	RCATGY	5 cut(s)	1391, 1531, 2378, 3299, 3452
NspV	TTCGAA	1 cut(s)	4067
PaeI	GCATGC	1 cut(s)	3452
PaeR7I	CTCGAG	1 cut(s)	2319
PauI	GCGCGC	1 cut(s)	4506
PciI	ACATGT	2 cut(s)	2374, 3295
PcsI	WCGNNNNNNNCGW	2 cut(s)	2233, 4077
PctI	GAATGC	6 cut(s)	1316, 2220, 2546, 2854, 3831, 4413
PflMI	CCANNNNNTGG	3 cut(s)	27, 340, 1597
PinAI	ACCGGT	1 cut(s)	2648
PleI	GAGTC	8 cut(s)	1010, 1256, 1295, 2174, 2805, 3265, 3466, 3951
PpsI	GAGTC	8 cut(s)	1010, 1256, 1295, 2174, 2805, 3265, 3466, 3951
Ppu21I	YACGTR	3 cut(s)	2006, 3953, 4081
PpuMI	RGGWCCY	2 cut(s)	55, 2695
PscI	ACATGT	2 cut(s)	2374, 3295
PshBI	ATTAAT	2 cut(s)	1242, 2832
Psp124BI	GAGCTC	2 cut(s)	361, 2619
Psp1406I	AACGTT	1 cut(s)	2240
Psp5II	RGGWCCY	2 cut(s)	55, 2695
Psp6I	CCWGG	9 cut(s)	50, 93, 608, 1000, 1562, 2511, 3342, 3871, 3895
PspFI	CCCAGC	2 cut(s)	470, 3610
PspGI	CCWGG	9 cut(s)	50, 93, 608, 1000, 1562, 2511, 3342, 3871, 3895
PspN4I	GGNNCC	9 cut(s)	19, 56, 57, 1586, 2653, 3341, 3813, 3840, 4144
PspPI	GGNCC	8 cut(s)	37, 55, 1090, 1584, 1763, 2139, 2695, 3151
PspPPI	RGGWCCY	2 cut(s)	55, 2695
PspXI	VCTCGAGB	1 cut(s)	2319
PsrI	GAACNNNNNNTAC	2 cut(s)	4061, 4093
PstNI	CAGNNNCTG	3 cut(s)	746, 2354, 4375
PsuI	RGATCY	5 cut(s)	657, 719, 742, 3771, 4237
PteI	GCGCGC	1 cut(s)	4506
PvuII	CAGCTG	3 cut(s)	930, 2354, 2423
RsaI	GTAC	8 cut(s)	806, 1120, 1796, 3028, 3469, 3966, 4282, 4289
RsaNI	GTAC	8 cut(s)	805, 1119, 1795, 3027, 3468, 3965, 4281, 4288
RseI	CAYNNNNRTG	3 cut(s)	1380, 2918, 4016
Rsr2I	CGGWCCG	1 cut(s)	1763
RsrII	CGGWCCG	1 cut(s)	1763
SacI	GAGCTC	2 cut(s)	361, 2619
Sau96I	GGNCC	8 cut(s)	37, 55, 1090, 1584, 1763, 2139, 2695, 3151
SchI	GAGTC	8 cut(s)	1010, 1256, 1296, 2174, 2806, 3266, 3467, 3952
SduI	GDGCHC	6 cut(s)	20, 361, 1014, 2619, 3176, 3827
SexAI	ACCWGGT	1 cut(s)	1562
SfcI	CTRYAG	1 cut(s)	1367
Sfr274I	CTCGAG	1 cut(s)	2319
SfuI	TTCGAA	1 cut(s)	4067
SinI	GGWCC	6 cut(s)	37, 55, 1090, 1763, 2139, 2695
SlaI	CTCGAG	1 cut(s)	2319
SmiMI	CAYNNNNRTG	3 cut(s)	1380, 2918, 4016
SmlI	CTYRAG	7 cut(s)	2319, 2678, 2717, 2794, 2801, 3008, 3098
SmoI	CTYRAG	7 cut(s)	2319, 2678, 2717, 2794, 2801, 3008, 3098
SnaBI	TACGTA	1 cut(s)	4081
SphI	GCATGC	1 cut(s)	3452
SspI	AATATT	2 cut(s)	951, 2446
SspMI	CTAG	5 cut(s)	1179, 1818, 1967, 2117, 3864
SstI	GAGCTC	2 cut(s)	361, 2619
StyI	CCWWGG	4 cut(s)	21, 960, 2961, 3214
TaiI	ACGT	5 cut(s)	2008, 2230, 2243, 3955, 4083
TaqII	GACCGA	1 cut(s)	1751
TatI	WGTACW	4 cut(s)	804, 3026, 4280, 4287
TauI	GCSGC	1 cut(s)	3416
TscAI	CASTG	9 cut(s)	460, 767, 883, 1113, 2859, 2886, 3241, 3449, 3911
TseFI	GTSAC	5 cut(s)	100, 3258, 3705, 3991, 4020
Tsp45I	GTSAC	5 cut(s)	100, 3258, 3705, 3991, 4020
TspRI	CASTG	9 cut(s)	460, 767, 883, 1113, 2859, 2886, 3241, 3449, 3911
Van91I	CCANNNNNTGG	3 cut(s)	27, 340, 1597
VpaK11BI	GGWCC	6 cut(s)	37, 55, 1090, 1763, 2139, 2695
VspI	ATTAAT	2 cut(s)	1242, 2832
XagI	CCTNNNNNAGG	1 cut(s)	590
XbaI	TCTAGA	2 cut(s)	1966, 3863
XceI	RCATGY	5 cut(s)	1391, 1531, 2378, 3299, 3452
XhoI	CTCGAG	1 cut(s)	2319
XmiI	GTMKAC	4 cut(s)	890, 1112, 2330, 4036
XspI	CTAG	5 cut(s)	1179, 1818, 1967, 2117, 3864
Zsp2I	ATGCAT	4 cut(s)	1192, 2947, 2971, 3833

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.