Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0013064

Physical Location & Seq

Genomic Coordinates Forward (+)

28481434 .. 28488530

Gene Structure 7097 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1222200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGTCGAGGGACGAGGCGGAAACGGCGGAAAATGAAAATAATTGGGCGGCGGAGGAGGAGGAGGAGGAGCAGTGCCGTCTGTACGAAGCCTACAACGAACTCCACGGCCTTGCGCAGGCCTTCGACACTCCATTCGACGCGCCAGCGGTGCTTGTGGTGGGCCACCAGACCGACGGCAAGAGCGCCTTGGTGGAAGCACTCATGGGGTTCCAGTTTAACCACGTCGGCGGCGGCACCAAGACCCGCCGTCCCATCACCCTTCACATGAAGTACGATCCCCACGCCCATTCCCCCGTCTGCCGCCTCCTCCTGCCCTCGGATTCCAATTCCGATTACGAAAAGCCTCTCTCGCTCCAAGAAATTCAAGCCTACACTGAAGCTGAGAACATGAGGTTGGAGAAGGAGCCTTGTCTCTTCTCCTCCAAGGAGATCATAATTCGAGTGGAGTACAAGTATTGCCCAAATCTTACCATTATCGACACTCCTGGACTAATCGCTCCTGCTCCTGGTCCAAAGAATCGAGCTTTACAGGGCCAAGCTCGTGCTGTTGAAGCACTTGTACGAGCGAAAATGCAGCATAAGGAGTTTATAATTTTGTGTCTTGAAGATTGCAGTGACTGGAGTAATGCAACTACAAGAAGGGTTGTAATGCAGATTGATCCCGAGCTCTCAAGGACTGTGATTGTCTCAACAAAACTTGATACCAAAATACCCCAGTTTTCTCGTGCCTCGGATGTGGAAGTATTTCTCTTACCTCCCACTTGTATGCTCGATGGGAGTATCTTGGGAGACTCTCCCTTTTTCACTTCTGTGCCCTCTGGAAGAGTTGGTGTAGGCCAAGATTCGGTTTACAGATCTAATGATGAGTTCAAAAAGGCAATATCATTAAGAGAGATGGAAGATGTTGCAAGCTTGGAGGAGAAAATGGGCCGGTCACTGTCAATGCAAGAAAGAAGTCGAATAGGTGTAAGCAAACTTAGGTCGTTTTTGGAAGAATTGCTACAGAAAAGGTATATGGATAATGTGCCACTAATCATTCCACTTCTTGAGAAGGAGTTCCGTAGCGCAACAAGAAAGATGAATGAAATAAATCAAGAACTCAGCACTTTGGATGAACTGAAACTAAAGGAGAAAGGAAGAATATTTCATGATCTGTTCTTGACAAAGTTATCATTGCTACTAAAAGGAACAGTTGTTGCACCTCCAGATAAATTTGGTGAAACGCTACAGGACGAGAGGACTAATGGAGGGGCATTTGTTAGCAGTGATGGCCTTCAGTTCCCTCACAAGCTTATACCTAATGCAGGAATGCGTCTATATGGGGGTGCACAATACCATCGTGCCATGGCTGAGTTCCGTTTTGTAGTTGGAGGTATAAAATGCCCTCCAATTACGAGGGAAGAAATTGTAAATGCATGTGGAGTGGAAGATTTACATGATGGAACAAACTACTCAAGGACAGCTTGTGTAATAGCTGTTGCAAAGGCACGTGATACATTTGAGCCTTTCCTTCATCAGTTAGGTTGTAGGCTCTTGCACATTCTGAAGAGATTACTTCCTATATCAGTCTATCTTCTTCAGAAAGATGGTGAGTATTTAAGTGGCCATGAGGTGTTTCTGAGGCGTGTTGCTTCTGCTTTCAATGATTTTGCAGAATCTACCGAAAGGGCTTGTCGTGAAAAATGCATGGAGGATTTAGTAAGCACCACCCGTTATGTGACCTGGTCTCTTCACAACAAGAATCGAGCTGGGTTACGTCAATTTTTAGACTCTTTCGCTGGAACAGAACATGCCACGACAGGTGGTAGTGGTGCATCTGCTGGTCTTTCTCAAGATTCATCCTTTGGGTCAGTCACCAGTGAGAAGGATACAAAGTCACGGGGAGATGTGAAGCTCAGTCATGTGGCATCTGGCACTGATTTGACATCTTCTATTCATTCAACAGAAACAAGGCTGGCTGATCTTTTAGATAGTACACTTTGGAATAGGAGGCTGGCTCCTTCATCTGAAAGGATCGTTTATGCTTTGGTGCAGCAGATATTTCATGGCATAAAGGAATATTTCTTAGCCTCTGCAGAGTTGAAGTTCAACTGCTTTCTTCTGATGCCTGTTGTAGATAAGTTGCCTGCACTGCTTAGAGAAGACTTAAAATCTGCTTTTGAGGATGACTTGGATAATATTTTTGATATCACCAATCTGAGACGCTTATTAGGCCAGCGAAAGCGAGATGCAGAAATTGAGATTAAAAGGATCAAGAGGCTCAAGGATAAGTTCAGATCACTAAATAAGCAGCTTAGTTCGAATCAAACGATTGCTACTGCCTTTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006996 GO:0007031 GO:0007623 GO:0008017 GO:0008092 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0010020 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016559 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0042170 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048511 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N WD40

Protein Analysis

777

Amino Acids

87.18

Weight (kDa)

6.16

Isoelectric Point (pI)

49.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	50 - 232	1.3e-30	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013064)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19720 AT3G19720 AT3G19720
fragaria_vesca	FvH4_5g30610 FvH4_5g30610 FvH4_5g30610
malus_domestica	MD08G1222200.v1.1 MD15G1415600.v1.1
prunus_persica	Prupe.1G560000_v2.0.a1
pyrus_communis	pycom08g19300
rosa_chinensis	RchiOBHm_Chr7g0225491
rosa_laevigata	RLG00000001812
rosa_multiflora	Rmu_sc0000259.1_g000003
rosa_roxburghii	Rroxscaffold_3G00233770
rosa_rugosa	Rorug07G0229900.1 Rorug07G0230000.1
rosa_samantha	Rh7AG373400
rosa_wichuraiana	Rw7G031700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	590
Acc16I	TGCGCA	1 cut(s)	114
AccB1I	GGYRCC	1 cut(s)	233
AccII	CGCG	1 cut(s)	140
AciI	CCGC	9 cut(s)	17, 26, 47, 50, 146, 228, 231, 244, 301
AclWI	GGATC	4 cut(s)	269, 653, 2021, 2258
AcoI	YGGCCR	1 cut(s)	1603
AcsI	RAATTY	2 cut(s)	360, 1211
AcuI	CTGAAG	4 cut(s)	396, 1259, 1562, 1565
AcvI	CACGTG	1 cut(s)	1490
AfaI	GTAC	5 cut(s)	83, 272, 449, 561, 1975
AfiI	CCNNNNNNNGG	5 cut(s)	115, 316, 506, 844, 1304
AgsI	TTSAA	8 cut(s)	365, 551, 605, 871, 1642, 1941, 2083, 2089
AhdI	GACNNNNNGTC	1 cut(s)	246
AjiI	CACGTC	1 cut(s)	223
AjnI	CCWGG	3 cut(s)	484, 505, 1721
AjuI	GAANNNNNNNTTGG	2 cut(s)	377, 409
AleI	CACNNNNGTG	1 cut(s)	809
Alw21I	GWGCWC	2 cut(s)	669, 1330
Alw26I	GTCTC	5 cut(s)	416, 691, 783, 1731, 2194
Alw44I	GTGCAC	1 cut(s)	1326
AlwI	GGATC	4 cut(s)	269, 653, 2021, 2258
AlwNI	CAGNNNCTG	1 cut(s)	618
Ama87I	CYCGRG	1 cut(s)	662
AoxI	GGCC	9 cut(s)	106, 117, 160, 532, 835, 928, 1270, 1603, 2212
ApaLI	GTGCAC	1 cut(s)	1326
ApeKI	GCWGC	3 cut(s)	574, 2032, 2290
ApoI	RAATTY	2 cut(s)	360, 1211
ArsI	GACNNNNNNTTYG	2 cut(s)	116, 148
Asp700I	GAANNNNTTC	2 cut(s)	744, 1055
AspLEI	GCGC	4 cut(s)	115, 142, 185, 1067
AspS9I	GGNCC	4 cut(s)	160, 509, 532, 928
AsuHPI	GGTGA	5 cut(s)	247, 1229, 1601, 1846, 2182
AsuII	TTCGAA	1 cut(s)	2300
AvaI	CYCGRG	1 cut(s)	662
AvaII	GGWCC	1 cut(s)	509
BaeGI	GKGCMC	2 cut(s)	816, 1330
BalI	TGGCCA	1 cut(s)	1605
BanI	GGYRCC	1 cut(s)	233
BanII	GRGCYC	1 cut(s)	669
BarI	GAAGNNNNNNTAC	4 cut(s)	543, 575, 984, 1016
BauI	CACGAG	2 cut(s)	540, 723
BbrPI	CACGTG	1 cut(s)	1490
BbsI	GAAGAC	1 cut(s)	2148
Bbv12I	GWGCWC	2 cut(s)	669, 1330
BbvI	GCAGC	3 cut(s)	586, 2044, 2302
BccI	CCATC	7 cut(s)	260, 767, 889, 1262, 1344, 1433, 1580
BceAI	ACGGC	5 cut(s)	39, 60, 121, 190, 231
BciT130I	CCWGG	3 cut(s)	486, 507, 1723
BciVI	GTATCC	1 cut(s)	1861
BcoDI	GTCTC	5 cut(s)	416, 691, 783, 1731, 2194
BfmI	CTRYAG	3 cut(s)	1001, 1226, 2073
BfoI	RGCGCY	1 cut(s)	186
BfuI	GTATCC	1 cut(s)	1861
BglII	AGATCT	1 cut(s)	854
BisI	GCNGC	7 cut(s)	48, 229, 232, 301, 575, 2033, 2291
BlsI	GCNGC	7 cut(s)	49, 230, 233, 302, 576, 2034, 2292
Bme1390I	CCNGG	3 cut(s)	486, 507, 1723
Bme18I	GGWCC	1 cut(s)	509
BmeRI	GACNNNNNGTC	1 cut(s)	246
BmeT110I	CYCGRG	1 cut(s)	662
BmgBI	CACGTC	1 cut(s)	223
BmgT120I	GGNCC	4 cut(s)	160, 509, 532, 928
BmiI	GGNNCC	4 cut(s)	209, 235, 405, 1998
BmrFI	CCNGG	3 cut(s)	486, 507, 1723
BmrI	ACTGGG	1 cut(s)	709
BmsI	GCATC	4 cut(s)	1823, 1916, 2094, 2218
BmuI	ACTGGG	1 cut(s)	709
BpiI	GAAGAC	1 cut(s)	2148
BplI	GAGNNNNNCTC	2 cut(s)	1981, 2013
BpmI	CTGGAG	2 cut(s)	640, 1188
Bpu14I	TTCGAA	1 cut(s)	2300
BpuEI	CTTGAG	5 cut(s)	655, 1067, 1438, 1815, 2246
BsaAI	YACGTR	1 cut(s)	1490
BsaI	GGTCTC	1 cut(s)	1731
BsaJI	CCNNGG	6 cut(s)	103, 186, 315, 423, 729, 1344
BsaXI	ACNNNNNCTCC	4 cut(s)	56, 86, 437, 467
Bsc4I	CCNNNNNNNGG	5 cut(s)	115, 316, 506, 844, 1304
Bse118I	RCCGGY	1 cut(s)	930
Bse1I	ACTGG	4 cut(s)	211, 623, 715, 1857
Bse3DI	GCAATG	1 cut(s)	1172
BseBI	CCWGG	3 cut(s)	486, 507, 1723
BseDI	CCNNGG	6 cut(s)	103, 186, 315, 423, 729, 1344
BseGI	GGATG	4 cut(s)	739, 1117, 1838, 2170
BseLI	CCNNNNNNNGG	5 cut(s)	115, 316, 506, 844, 1304
BseMI	GCAATG	1 cut(s)	1172
BseMII	CTCAG	6 cut(s)	372, 1114, 1341, 1610, 1909, 2189
BseNI	ACTGG	4 cut(s)	211, 623, 715, 1857
BseRI	GAGGAG	8 cut(s)	68, 71, 74, 77, 80, 296, 409, 932
BseSI	GKGCMC	2 cut(s)	816, 1330
BseXI	GCAGC	3 cut(s)	586, 2044, 2302
BseYI	CCCAGC	1 cut(s)	1748
BsgI	GTGCAG	2 cut(s)	2051, 2112
Bsh1236I	CGCG	1 cut(s)	140
BshFI	GGCC	9 cut(s)	108, 119, 162, 534, 837, 930, 1272, 1605, 2214
BshNI	GGYRCC	1 cut(s)	233
BsiHKAI	GWGCWC	2 cut(s)	669, 1330
BsiHKCI	CYCGRG	1 cut(s)	662
BsiSI	CCGG	1 cut(s)	931
BslFI	GGGAC	2 cut(s)	23, 234
BslI	CCNNNNNNNGG	5 cut(s)	115, 316, 506, 844, 1304
BsmAI	GTCTC	5 cut(s)	416, 691, 783, 1731, 2194
BsmBI	CGTCTC	1 cut(s)	2194
BsmFI	GGGAC	2 cut(s)	23, 234
BsmI	GAATGC	1 cut(s)	1314
BsnI	GGCC	9 cut(s)	108, 119, 162, 534, 837, 930, 1272, 1605, 2214
Bso31I	GGTCTC	1 cut(s)	1731
BsoBI	CYCGRG	1 cut(s)	662
Bsp119I	TTCGAA	1 cut(s)	2300
Bsp1286I	GDGCHC	3 cut(s)	669, 816, 1330
Bsp143I	GATC	9 cut(s)	274, 429, 658, 854, 1150, 1960, 2013, 2250, 2276
Bsp19I	CCATGG	1 cut(s)	1344
BspACI	CCGC	9 cut(s)	17, 26, 47, 50, 146, 228, 231, 244, 301
BspANI	GGCC	9 cut(s)	108, 119, 162, 534, 837, 930, 1272, 1605, 2214
BspCNI	CTCAG	6 cut(s)	373, 1113, 1342, 1611, 1908, 2190
BspFNI	CGCG	1 cut(s)	140
BspHI	TCATGA	1 cut(s)	1147
BspLI	GGNNCC	4 cut(s)	209, 235, 405, 1998
BspMAI	CTGCAG	1 cut(s)	2077
BspPI	GGATC	4 cut(s)	269, 653, 2021, 2258
BspT104I	TTCGAA	1 cut(s)	2300
BspT107I	GGYRCC	1 cut(s)	233
BspTNI	GGTCTC	1 cut(s)	1731
BsrDI	GCAATG	1 cut(s)	1172
BsrFI	RCCGGY	1 cut(s)	930
BsrI	ACTGG	4 cut(s)	211, 623, 715, 1857
BssAI	RCCGGY	1 cut(s)	930
BssECI	CCNNGG	6 cut(s)	103, 186, 315, 423, 729, 1344
BssMI	GATC	9 cut(s)	274, 429, 658, 854, 1150, 1960, 2013, 2250, 2276
BssSI	CACGAG	2 cut(s)	540, 723
BssT1I	CCWWGG	3 cut(s)	186, 423, 1344
Bst2BI	CACGAG	2 cut(s)	540, 723
Bst2UI	CCWGG	3 cut(s)	486, 507, 1723
Bst4CI	ACNGT	3 cut(s)	679, 939, 1192
Bst6I	CTCTTC	4 cut(s)	419, 817, 1541, 1734
BstBAI	YACGTR	1 cut(s)	1490
BstBI	TTCGAA	1 cut(s)	2300
BstC8I	GCNNGC	7 cut(s)	117, 144, 910, 1956, 1995, 2127, 2216
BstDSI	CCRYGG	2 cut(s)	103, 1344
BstENI	CCTNNNNNAGG	2 cut(s)	113, 1302
BstF5I	GGATG	4 cut(s)	739, 1117, 1838, 2170
BstFNI	CGCG	1 cut(s)	140
BstH2I	RGCGCY	1 cut(s)	186
BstHHI	GCGC	4 cut(s)	115, 142, 185, 1067
BstKTI	GATC	9 cut(s)	277, 432, 661, 857, 1153, 1963, 2016, 2253, 2279
BstMAI	GTCTC	5 cut(s)	416, 691, 783, 1731, 2194
BstMBI	GATC	9 cut(s)	274, 429, 658, 854, 1150, 1960, 2013, 2250, 2276
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 148, 349, 551, 1269, 2131, 2211
BstNI	CCWGG	3 cut(s)	486, 507, 1723
BstNSI	RCATGY	2 cut(s)	1419, 1793
BstSCI	CCNGG	3 cut(s)	484, 505, 1721
BstSFI	CTRYAG	3 cut(s)	1001, 1226, 2073
BstSLI	GKGCMC	2 cut(s)	816, 1330
BstUI	CGCG	1 cut(s)	140
BstV1I	GCAGC	3 cut(s)	586, 2044, 2302
BstV2I	GAAGAC	1 cut(s)	2148
BstX2I	RGATCY	1 cut(s)	854
BstYI	RGATCY	1 cut(s)	854
BsuI	GTATCC	1 cut(s)	1861
BsuRI	GGCC	9 cut(s)	108, 119, 162, 534, 837, 930, 1272, 1605, 2214
BtgI	CCRYGG	2 cut(s)	103, 1344
BtrI	CACGTC	1 cut(s)	223
BtsCI	GGATG	4 cut(s)	739, 1117, 1838, 2170
BtsI	GCAGTG	4 cut(s)	77, 619, 1270, 2129
BtsIMutI	CAGTG	8 cut(s)	77, 372, 619, 935, 1270, 1864, 1914, 2129
Cac8I	GCNNGC	7 cut(s)	117, 144, 910, 1956, 1995, 2127, 2216
CaiI	CAGNNNCTG	1 cut(s)	618
CciI	TCATGA	1 cut(s)	1147
CfoI	GCGC	4 cut(s)	115, 142, 185, 1067
Cfr10I	RCCGGY	1 cut(s)	930
Cfr13I	GGNCC	4 cut(s)	160, 509, 532, 928
CseI	GACGC	3 cut(s)	146, 1301, 2211
CsiI	ACCWGGT	1 cut(s)	1721
Csp6I	GTAC	5 cut(s)	82, 271, 448, 560, 1974
CviQI	GTAC	5 cut(s)	82, 271, 448, 560, 1974
DpnI	GATC	9 cut(s)	276, 431, 660, 856, 1152, 1962, 2015, 2252, 2278
DpnII	GATC	9 cut(s)	274, 429, 658, 854, 1150, 1960, 2013, 2250, 2276
DriI	GACNNNNNGTC	1 cut(s)	246
EaeI	YGGCCR	1 cut(s)	1603
Eam1104I	CTCTTC	4 cut(s)	419, 817, 1541, 1734
Eam1105I	GACNNNNNGTC	1 cut(s)	246
EarI	CTCTTC	4 cut(s)	419, 817, 1541, 1734
EciI	GGCGGA	3 cut(s)	32, 41, 65
Ecl136II	GAGCTC	1 cut(s)	667
Eco130I	CCWWGG	3 cut(s)	186, 423, 1344
Eco147I	AGGCCT	1 cut(s)	119
Eco24I	GRGCYC	1 cut(s)	669
Eco31I	GGTCTC	1 cut(s)	1731
Eco32I	GATATC	1 cut(s)	2188
Eco47I	GGWCC	1 cut(s)	509
Eco53kI	GAGCTC	1 cut(s)	667
Eco57I	CTGAAG	4 cut(s)	396, 1259, 1562, 1565
Eco72I	CACGTG	1 cut(s)	1490
Eco88I	CYCGRG	1 cut(s)	662
EcoICRI	GAGCTC	1 cut(s)	667
EcoNI	CCTNNNNNAGG	2 cut(s)	113, 1302
EcoRII	CCWGG	3 cut(s)	484, 505, 1721
EcoRV	GATATC	1 cut(s)	2188
EcoT14I	CCWWGG	3 cut(s)	186, 423, 1344
EcoT22I	ATGCAT	2 cut(s)	1417, 1688
EcoT38I	GRGCYC	1 cut(s)	669
ErhI	CCWWGG	3 cut(s)	186, 423, 1344
Esp3I	CGTCTC	1 cut(s)	2194
FalI	AAGNNNNNCTT	4 cut(s)	170, 202, 1447, 1479
FaqI	GGGAC	2 cut(s)	23, 234
FauI	CCCGC	1 cut(s)	251
Fnu4HI	GCNGC	7 cut(s)	48, 229, 232, 301, 575, 2033, 2291
FokI	GGATG	4 cut(s)	746, 1124, 1825, 2177
FriOI	GRGCYC	1 cut(s)	669
Fsp4HI	GCNGC	7 cut(s)	48, 229, 232, 301, 575, 2033, 2291
FspI	TGCGCA	1 cut(s)	114
GlaI	GCGC	4 cut(s)	114, 141, 184, 1066
GluI	GCNGC	7 cut(s)	48, 229, 232, 301, 575, 2033, 2291
GsaI	CCCAGC	1 cut(s)	1752
GsuI	CTGGAG	2 cut(s)	640, 1188
HaeII	RGCGCY	1 cut(s)	186
HaeIII	GGCC	9 cut(s)	108, 119, 162, 534, 837, 930, 1272, 1605, 2214
HapII	CCGG	1 cut(s)	931
HgaI	GACGC	3 cut(s)	146, 1301, 2211
HhaI	GCGC	4 cut(s)	115, 142, 185, 1067
Hin6I	GCGC	4 cut(s)	113, 140, 183, 1065
HinP1I	GCGC	4 cut(s)	113, 140, 183, 1065
HindIII	AAGCTT	2 cut(s)	910, 1289
HinfI	GANTC	9 cut(s)	320, 517, 791, 842, 1655, 1741, 1769, 1835, 2302
HpaII	CCGG	1 cut(s)	931
HphI	GGTGA	5 cut(s)	247, 1229, 1601, 1846, 2182
Hpy166II	GTNNAC	3 cut(s)	850, 1328, 1976
Hpy8I	GTNNAC	3 cut(s)	850, 1328, 1976
Hpy99I	CGWCG	3 cut(s)	140, 176, 227
HpyAV	CCTTC	9 cut(s)	130, 269, 394, 633, 1045, 1283, 1520, 1858, 2010
HpyCH4III	ACNGT	3 cut(s)	679, 939, 1192
HpyCH4IV	ACGT	3 cut(s)	222, 1489, 1756
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 148, 349, 551, 1269, 2131, 2211
HpySE526I	ACGT	3 cut(s)	222, 1489, 1756
HspAI	GCGC	4 cut(s)	113, 140, 183, 1065
Kzo9I	GATC	9 cut(s)	274, 429, 658, 854, 1150, 1960, 2013, 2250, 2276
LmnI	GCTCC	6 cut(s)	67, 357, 403, 502, 508, 2002
Lsp1109I	GCAGC	3 cut(s)	586, 2044, 2302
LweI	GCATC	4 cut(s)	1823, 1916, 2094, 2218
MabI	ACCWGGT	1 cut(s)	1721
MaeII	ACGT	3 cut(s)	222, 1489, 1756
MaeIII	GTNAC	6 cut(s)	614, 933, 1717, 1752, 1852, 1875
MalI	GATC	9 cut(s)	276, 431, 660, 856, 1152, 1962, 2015, 2252, 2278
MboI	GATC	9 cut(s)	274, 429, 658, 854, 1150, 1960, 2013, 2250, 2276
MflI	RGATCY	1 cut(s)	854
MhlI	GDGCHC	3 cut(s)	669, 816, 1330
MlsI	TGGCCA	1 cut(s)	1605
MluNI	TGGCCA	1 cut(s)	1605
MlyI	GAGTC	2 cut(s)	785, 1763
MmeI	TCCRAC	2 cut(s)	375, 1348
Mox20I	TGGCCA	1 cut(s)	1605
Mph1103I	ATGCAT	2 cut(s)	1417, 1688
MroXI	GAANNNNTTC	2 cut(s)	744, 1055
MscI	TGGCCA	1 cut(s)	1605
MseI	TTAA	5 cut(s)	216, 887, 1598, 2147, 2244
MslI	CAYNNNNRTG	2 cut(s)	764, 809
Msp20I	TGGCCA	1 cut(s)	1605
MspA1I	CMGCKG	1 cut(s)	146
MspI	CCGG	1 cut(s)	931
MspR9I	CCNGG	3 cut(s)	486, 507, 1723
Mva1269I	GAATGC	1 cut(s)	1314
MvaI	CCWGG	3 cut(s)	486, 507, 1723
MvnI	CGCG	1 cut(s)	140
MwoI	GCNNNNNNNGC	7 cut(s)	23, 148, 349, 551, 1269, 2131, 2211
NcoI	CCATGG	1 cut(s)	1344
NdeII	GATC	9 cut(s)	274, 429, 658, 854, 1150, 1960, 2013, 2250, 2276
NlaIV	GGNNCC	4 cut(s)	209, 235, 405, 1998
NmuCI	GTSAC	5 cut(s)	614, 933, 1717, 1852, 1875
NsbI	TGCGCA	1 cut(s)	114
NsiI	ATGCAT	2 cut(s)	1417, 1688
NspI	RCATGY	2 cut(s)	1419, 1793
NspV	TTCGAA	1 cut(s)	2300
OliI	CACNNNNGTG	1 cut(s)	809
PagI	TCATGA	1 cut(s)	1147
PceI	AGGCCT	1 cut(s)	119
PcsI	WCGNNNNNNNCGW	1 cut(s)	2306
PctI	GAATGC	1 cut(s)	1314
PdmI	GAANNNNTTC	2 cut(s)	744, 1055
PfeI	GAWTC	7 cut(s)	320, 517, 842, 1655, 1741, 1835, 2302
PflFI	GACNNNGTC	1 cut(s)	1723
PfoI	TCCNGGA	1 cut(s)	484
PkrI	GCNGC	7 cut(s)	49, 230, 233, 302, 576, 2034, 2292
PleI	GAGTC	2 cut(s)	785, 1763
PmaCI	CACGTG	1 cut(s)	1490
PmlI	CACGTG	1 cut(s)	1490
PpsI	GAGTC	2 cut(s)	785, 1763
Ppu21I	YACGTR	1 cut(s)	1490
PsiI	TTATAA	1 cut(s)	590
Psp124BI	GAGCTC	1 cut(s)	669
Psp6I	CCWGG	3 cut(s)	484, 505, 1721
PspCI	CACGTG	1 cut(s)	1490
PspFI	CCCAGC	1 cut(s)	1748
PspGI	CCWGG	3 cut(s)	484, 505, 1721
PspN4I	GGNNCC	4 cut(s)	209, 235, 405, 1998
PspPI	GGNCC	4 cut(s)	160, 509, 532, 928
PstI	CTGCAG	1 cut(s)	2077
PstNI	CAGNNNCTG	1 cut(s)	618
PsuI	RGATCY	1 cut(s)	854
PsyI	GACNNNGTC	1 cut(s)	1723
RsaI	GTAC	5 cut(s)	83, 272, 449, 561, 1975
RsaNI	GTAC	5 cut(s)	82, 271, 448, 560, 1974
RseI	CAYNNNNRTG	2 cut(s)	764, 809
SacI	GAGCTC	1 cut(s)	669
SaqAI	TTAA	5 cut(s)	216, 887, 1598, 2147, 2244
SatI	GCNGC	7 cut(s)	48, 229, 232, 301, 575, 2033, 2291
Sau3AI	GATC	9 cut(s)	274, 429, 658, 854, 1150, 1960, 2013, 2250, 2276
Sau96I	GGNCC	4 cut(s)	160, 509, 532, 928
SchI	GAGTC	2 cut(s)	785, 1763
ScrFI	CCNGG	3 cut(s)	486, 507, 1723
SduI	GDGCHC	3 cut(s)	669, 816, 1330
SexAI	ACCWGGT	1 cut(s)	1721
SfaNI	GCATC	4 cut(s)	1823, 1916, 2094, 2218
SfcI	CTRYAG	3 cut(s)	1001, 1226, 2073
SfuI	TTCGAA	1 cut(s)	2300
SinI	GGWCC	1 cut(s)	509
SmiMI	CAYNNNNRTG	2 cut(s)	764, 809
SmlI	CTYRAG	5 cut(s)	670, 1046, 1453, 1830, 2261
SmoI	CTYRAG	5 cut(s)	670, 1046, 1453, 1830, 2261
SseBI	AGGCCT	1 cut(s)	119
SsiI	CCGC	9 cut(s)	17, 26, 47, 50, 146, 228, 231, 244, 301
SspI	AATATT	3 cut(s)	1143, 2060, 2179
SstI	GAGCTC	1 cut(s)	669
StuI	AGGCCT	1 cut(s)	119
StyD4I	CCNGG	3 cut(s)	484, 505, 1721
StyI	CCWWGG	3 cut(s)	186, 423, 1344
TaaI	ACNGT	3 cut(s)	679, 939, 1192
TaiI	ACGT	3 cut(s)	225, 1492, 1759
TaqII	GACCGA	1 cut(s)	185
TatI	WGTACW	2 cut(s)	447, 1973
TauI	GCSGC	4 cut(s)	50, 231, 234, 303
TfiI	GAWTC	7 cut(s)	320, 517, 842, 1655, 1741, 1835, 2302
Tru1I	TTAA	5 cut(s)	216, 887, 1598, 2147, 2244
Tru9I	TTAA	5 cut(s)	216, 887, 1598, 2147, 2244
TscAI	CASTG	8 cut(s)	77, 379, 619, 942, 1270, 1864, 1921, 2136
TseFI	GTSAC	5 cut(s)	614, 933, 1717, 1852, 1875
TseI	GCWGC	3 cut(s)	574, 2032, 2290
Tsp45I	GTSAC	5 cut(s)	614, 933, 1717, 1852, 1875
TspGWI	ACGGA	2 cut(s)	1049, 1346
TspRI	CASTG	8 cut(s)	77, 379, 619, 942, 1270, 1864, 1921, 2136
Tth111I	GACNNNGTC	1 cut(s)	1723
VneI	GTGCAC	1 cut(s)	1326
VpaK11BI	GGWCC	1 cut(s)	509
XagI	CCTNNNNNAGG	2 cut(s)	113, 1302
XapI	RAATTY	2 cut(s)	360, 1211
XceI	RCATGY	2 cut(s)	1419, 1793
XmnI	GAANNNNTTC	2 cut(s)	744, 1055
Zsp2I	ATGCAT	2 cut(s)	1417, 1688

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.